ID:

dsi_12887

 Coordinate:

2l:20336988-20337137 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.8 -16.5 -16.1 -16.0

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GCTCGCGAATGAAACCGGCCTGTCCGCCGGAAAATATCTGAGAAGCCCGGCCGCATCCGAACGCTCCGCACGTAAGCCCGTCAGAGAACTCGCCGTGCTCCGATATTCTTGGCCGCGATCCAATCCCCGCTAGCATCGCCCGGATGCGTAATGATTTCTTTCAACCGCCGTGGAAGTATTTACATTACATTTCGATACAGCCAGAGCCCGCAGAAGATGTGATCTGAAAAATTGAATGTTGAATGTGCTG
****************************************************************************..((...(((((.(((...(((((((.........((.(((..........)))..))......)))).)))...))).)))))..........))****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 SRR618934
dsim w501 ovaries
............................................................................CCCGTCAGAGAACTCGCCG........................................................................................................................................................... 19 0 1 7.00 7 6 1 0 0 0 0 0 0
....................................................................CACGTAAGCCCGTCAGAGAACTCGCC............................................................................................................................................................ 26 0 1 5.00 5 3 2 0 0 0 0 0 0
....................................................................CACGTAAGCCCGTCAGAGAACTC............................................................................................................................................................... 23 0 1 4.00 4 4 0 0 0 0 0 0 0
....................................................................CACGTAAGCCCGTCAGAGAACTCG.............................................................................................................................................................. 24 0 1 4.00 4 2 2 0 0 0 0 0 0
....................................................................................................................................................................................................................GTCGATGTCATCTGAAAAATTGA............... 23 3 1 3.00 3 0 0 0 3 0 0 0 0
..........................................................................AGCCCGTCAGAGAACTCG.............................................................................................................................................................. 18 0 1 3.00 3 3 0 0 0 0 0 0 0
.......................................................................GTAAGCCCGTCAGAGAACTCGCC............................................................................................................................................................ 23 0 1 2.00 2 2 0 0 0 0 0 0 0
......................................................................CGTAAGCCCGTCAGAGAACTCGCCG........................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................CACGTAAGCCCGTCAGAGAACTCGC............................................................................................................................................................. 25 0 1 2.00 2 1 0 1 0 0 0 0 0
..........................................................................AGCCCGTCAGAGAACTCGCCGTG......................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0
...........................................................................GCCCGTCAGAGAACTCGCC............................................................................................................................................................ 19 0 1 2.00 2 0 0 2 0 0 0 0 0
...............................................................CTCCGCACGTAAGCCCGG......................................................................................................................................................................... 18 1 1 1.00 1 0 1 0 0 0 0 0 0
.............................................................................CCGTCAGAGAACTCGCCG........................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................AGCCCGTCAGAGAACTCGCCG........................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................ACGTAAGCCCGTCAGAGAACTCGCCG........................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0
.................................................................................................................................................GCGTAATGATTTCTTTCAACCGCCGTG.............................................................................. 27 0 1 1.00 1 0 0 0 0 1 0 0 0
.....................................................................................GAACTCGCCGTGCTCCGATATTCTTG........................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0
....................................................................CACGTAAGCCCGTCAGAGAAC................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................GTCAGAGAACTCGCCGTG......................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0
......................TCCGCCGGAAAATATCTG.................................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................AACGCTCCGCACGTAAGC............................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 1 0 0 0
...............................................................................GTCAGAGAACTCGCCGTGCTCCGAT.................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0
.......................................................................GTAAGCCCGTCAGAGAACTC............................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0
..................................................CCGCATCCGAACGCTCCG...................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0
................................................................................................................................GCTAGCATCGCCCGGATG........................................................................................................ 18 0 1 1.00 1 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................................TGAAAAATTGAATGTTGAATGTGCT. 25 0 1 1.00 1 0 0 0 1 0 0 0 0
..........................................................................AGCCCGTCAGAGAACTCGCCGTGG........................................................................................................................................................ 24 1 1 1.00 1 0 0 1 0 0 0 0 0
..................................................................CGCACGTAAGCCCGTCAGAGAACTCGC............................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................ACCCCGTCAGAGAACTCGCCG........................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................CCCGTCAGAGAACTCGCC............................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................CGGAAAATATCTGAGAAGCCCGGCCG..................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................CCCGTCAGAGAACTCGCCGTGCTCCGA................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................AGCCCGTCAGAGAACTCGCCGT.......................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
..............................................................................CGTCAGAGAACTCGCCGTGC........................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0
.................................ATATCTGAGAAGCCCGGC....................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................GCCCGTCAGAGAACTCGC............................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................GTCAGAGAACTCGCCGTGC........................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................GCTCCGCACGTAAGCCCG.......................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................TACATTACATTTCGATACAGCCAGA............................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0
.......................................................................GGAAGCCCGTCAGAGA................................................................................................................................................................... 16 1 1 1.00 1 0 0 0 0 0 1 0 0
.......................................................................GTAAGCCCGTCAGAGAACTCGCCGTGC........................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0
...........................CGGAAAATATCTGAGAAGCC........................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................GCACGTAAGCCCGTCAGAGAACTCGCCG........................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................AACTCGCCGTGCTCCGATATTCT............................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 1 0 0 0
..........................................................GAACGCTCCGCACGTAAGCC............................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0
GCTCGCGAATGAAACCGGCCTGT................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................GATCCGATATTCTTGGGCG....................................................................................................................................... 19 2 2 0.50 1 0 0 0 0 0 0 1 0
........................................................................................................................................................................................................................ATGTCATCTGAAAAATTGA............... 19 1 3 0.33 1 0 0 0 1 0 0 0 0
....................................................................................................................................................TATTGATTTCTTTGAACCGAC................................................................................. 21 3 4 0.25 1 0 0 0 0 0 1 0 0
..........................................................................................................................................................................................................................................AATGTTGAATGTGCT. 15 0 5 0.20 1 0 0 0 0 0 0 0 1
...........................................................................GCCCTTGAGAGAACTCG.............................................................................................................................................................. 17 2 7 0.14 1 0 0 0 0 0 1 0 0
.........................................................CGAACGCTCCGCAAGGA................................................................................................................................................................................ 17 2 8 0.13 1 0 0 0 0 0 1 0 0
......................................................................CGTTAGCCCGTCACAG.................................................................................................................................................................... 16 2 10 0.10 1 0 0 0 0 0 1 0 0
..............................................................TCTCCGGACGTAAGCCCGG......................................................................................................................................................................... 19 3 10 0.10 1 0 0 0 0 0 0 0 1
...............................................................................................................................CGCTCGCCTCGCTCGGATGC....................................................................................................... 20 3 11 0.09 1 0 0 0 0 0 1 0 0
..........................................................................................................................................................................................................................................GATGTTGAATGTGCT. 15 1 19 0.05 1 0 0 0 0 0 0 0 1
..........................................................................................................................................................................................................................................AATGTTGAACGTGCT. 15 1 20 0.05 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

CGAGCGCTTACTTTGGCCGGACAGGCGGCCTTTTATAGACTCTTCGGGCCGGCGTAGGCTTGCGAGGCGTGCATTCGGGCAGTCTCTTGAGCGGCACGAGGCTATAAGAACCGGCGCTAGGTTAGGGGCGATCGTAGCGGGCCTACGCATTACTAAAGAAAGTTGGCGGCACCTTCATAAATGTAATGTAAAGCTATGTCGGTCTCGGGCGTCTTCTACACTAGACTTTTTAACTTACAACTTACACGAC
******************************************************************************..((...(((((.(((...(((((((.........((.(((..........)))..))......)))).)))...))).)))))..........))**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR1275487
Male larvae		 SRR553486
Makindu_3 day-old ovaries
..................................................................................................AGGCTATAAGAACCCGCT...................................................................................................................................... 18 2 6 2.83 17 17 0 0 0 0 0 0
.............................................................................GGCAGTCTCTTGAGCATCACG........................................................................................................................................................ 21 2 1 1.00 1 0 0 1 0 0 0 0
................................................................................................CGAGGCTATAAGAACCCGCT...................................................................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0
......................................................................................................................................................................................................TCAGTCTCGGGCGTCT.................................... 16 1 5 0.20 1 0 0 0 1 0 0 0
........................................................GGGTTGCGAGGCGGGCATTT.............................................................................................................................................................................. 20 3 7 0.14 1 0 0 0 0 1 0 0
...........TTTGTCCGTACGGGCGGCCT........................................................................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 1 0
....................................................GGTAGGCTTGCGAGG....................................................................................................................................................................................... 15 1 9 0.11 1 0 0 0 1 0 0 0
......................................................................................................................................................................................TTAATGTAAAGGTTTGTCGGT............................................... 21 3 10 0.10 1 0 0 0 0 1 0 0
..........ATTTGGGCGGACAGGCGGA............................................................................................................................................................................................................................. 19 3 17 0.06 1 0 1 0 0 0 0 0
.........................................................................................................................................................................................................GTCTCGGGTGTCTTC.................................. 15 1 18 0.06 1 0 0 1 0 0 0 0
.......................................................................................TGAGTGGGACGAGGCTA.................................................................................................................................................. 17 2 20 0.05 1 0 0 0 0 0 0 1
........................................................................................................................................................................................................................TACATTAGACTTTTTA.................. 16 1 20 0.05 1 0 0 0 1 0 0 0
...........................................TCGGGCTGGCGCAGGC............................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:20336938-20337187 - dsi_12887 GCT--------------C--------GC-GAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAAGCCCGGCCGCATCCGAACGCTCCGCACGTA---A-----GCCCG---TCAGAGAACT-------------------------CGCCG-------------TGCT--C-CGATATTCTTGGCCGCG-AT---C---C--------------A--ATCCCCGCT----------------A---GCATCGCCC-----------------------------GGATGC------GTAATGATT-----TCTTTCAACCGCCGT-GG------------------------------------------------------------AAGTATTTACATTACATTTCG------------ATACAGC-----------------------CAGAGCCCG-----------------------CAGAAGATGTGATCTGAAAA-ATTGAATGTTGAATGTGCTG
droSec2 scaffold_18:813300-813549 - GCT--------------C--------GC-GAATGAAACCGGCCTGTCCGCCGCAAAATA-TCTGAGAAGCCCGGCCGCATCCGAACGTTCCGCACGTA---A-----GCCCG---TCCGAGAACT-------------------------CGCCG-------------TGCT--C-CGATTTTCTTGGCCGCG-AT---C---C--------------A--ATCCCCGCT----------------A---GCATCGCCC-----------------------------GGATGC------GTAATGATT-----TCTTTCAACCGCCGT-GG------------------------------------------------------------AAGTATTTAAATTACATTTCG------------ATACAGC-----------------------CAGAGCCCG-----------------------CAAAAGATGTGATCTGAAAA-ATTGAATGTTGAATGTGCTG
dm3 chr2L:20885776-20886015 - GCT--------------C--------GC-GAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAAGCCCGGCCGCATCCGAACGCTCCGCACGTA---AGCTAAGCCCG---TCTGAGAACT-------------------------CGCCG-------------TGCT--C-CGATTTTCTTAGCCGCG-AT---C---C--------------A--ATCCCCGCT----------------A---GCATCGCCC-----------------------------GGATGC------GTAATGATT-----TCTTTCAACCGCCGT-GG------------------------------------------------------------AAGTATTTACATTACATTTCA------------ATACACG-----------------------CAGAGCCCG-----------------------CAA---------------AA-GTTGAATGTTGAATGTGAAG
droEre2 scaffold_4845:3575092-3575346 + GCT--------------C--------GC-GAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAAGCCCGGACGCATCCGAACGCTCCGCACGTA---A-----GCCCG---TCCGAGAACT-------------------------CGCCG-------------TGCT--C-CGATTTTCTTGGCCGCG-AT---C---C--------------A--ATCCCCGCT----------------A---GCATCGCGC-----------------------------GGATGC------GTAATGACTTGAATTCTTCCAGCCGCCGT-GG------------------------------------------------------------AGGTATTAAAATTGCTTTTCG------------ATACAGC-----------------------CAGAGCCCG-----------------------CAAAAAATGTGATCTGAGAA-TTTAAATGCTAAATGTGCTG
droYak3 2R:1859803-1860053 + GCT--------------C--------GC-AAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAAGCCCGGACGCATCCGAACGCTCCGCACGTA---A-----GCCCG---TCCGAGAACT-------------------------CGTCG-------------TGCG--C-CGATTTTCTTGGCCGCG-ATCCCATCAC--------------A--AT--CCGCT-----------------------------------------------------------GATGC------GTAATGATT-----TCTTTCAACCGCCGT-GG------------------------------------------------------------AAGTATTAAAATTACATTTCG------------ATACTCG-----------A-TACAGC----CAGAGCCCGC----------------------AAAAAAATGTGATCTGAAAA-TTTAAATGTTAAATGTGCTG
droEug1 scf7180000409767:412444-412731 + GCC--------------T--------ACGGAATGAAACCGGCCTGTACGCCGGAAAATA-TCTGAGAACCCCGAACGCATCCGAACGCTCCGCACGTCAAAA-----ATCCG---TTCGAGAAAT------CTGACT-----------CCCGGCGAA-----------TACT--T-CAATTTTCTTCGCTTCGAAA---A---T--------------G--AT---CGAG----------------A---ATATCGCGCG----------------------------GGATGC------TTAATGATT-----TTGTTCAACCCTCGT-AAAGAAAAT-AA-------A----------------------------------------AAAATTATTAAAATTA-ATTTGT----CGATTT-----TATAC----------A-AAAAACACA-GAGAGCCAG-----------------------CGAAAGATGTGAACTGAAAA-TTTAAATGTTAAATGTGCTG
droBia1 scf7180000302422:7205457-7205704 + GTC--------------C--------GCGGAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAACCCCGAACGCATCCGAGCGCTCCGCACGTA---G-----ACCCG---TCCGAGAATC-------------------------CGCCG-------------CACT--CCCGATTTTCCCAACTTCG-AC---G---C--------------G--ATCCCCAGT----------------A---GTGCCGCGGG----------------------------GGAGGC------CCAATGATT-----TCGTTCAACCCTCGT-TA------------------------------------------------------------AGATATTGAAATTC-ATTTCG------------AAAC---------------------------AGAGCCAA-----------------------CGAAAAATGTGAACTGAAAA-TTTAAATGCTAAATGTGCTG
droTak1 scf7180000415708:582409-582665 + GTC--------------C--------GCGGAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAACCCCGAACGCATCCGAACGCTCCGCACGTA---A-----ACCCG---TCCGAGAAGT-----------------------CCCGCCT-------------TACT--T-CGATTTTCTTCGCTTCC-AA---A---C--------------G--ATCCCCAATA--------ATACAATA---ATATAGCGCG----------------------------GGATGC------CTAATGATT-----TTTTTCAACTCTCGT-TA------------------------------------------------------------AAATATTGAAATTA-ATTTCG------------ACGCAGC-----------------------GAGAG---------------------------CGAAAAATGTGAACTGAAAA-TTTAAATGTTAAATGTACTG
droEle1 scf7180000491186:910449-910715 - GCC--------------C--------ACGGAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAACCCCGAACGCATCCGAACGCTCCGCACGTA---G-----------------TAAATC-------------------------CGCCG-------------TATT--C-CGATTTTCTTCGACACG-ATTCTC---C--------------G--ATCGCCAAT-----------ATCGCA---ATATCACACG----------------------------GGATGC------CTAATGATT-----TCTTTCAACCCTCAT-TA------------------------------------------------------------AAATTTTGGAATTA-ATTTCGATTTCGATTTCGATACACCCGC------------------AGCAGAGCCAA-----------------------CGAATAATGTGAACTGCAAA-TTTAAATGTTAAATGTGCTG
droRho1 scf7180000777263:38508-38758 - GCCCAC--C-------CC--------ACGGAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAACCCCGAACGCATCCGAACGCTTCGCACGTA---A-----ACCCG---TTCGAGAATT-----------------------C-CTCCG-------------TACT--C-CGATTTTCTTC-----G-AT---T---C--------------G--ATCCCCAAT----------------------ATCGCGCG----------------------------GGACGC------CTAATGATT-----TCTTTCAACCCTCAT-TA------------------------------------------------------------AAATATTGAAATTA-ATTTCG------------ATACACCCG---------------------CAGAGCCAA-----------------------CGAAAAATGTGAACTGAAAA-TTTAAATGTTAAATGTGCTG
droFic1 scf7180000453842:383957-384214 - GCC--------------C--------ACGGAATGAAACCGGCCTGTCCGCCGGAAAATA-TCAGAGAACCCCGAACGCATCCGAACGCTCCGCACGTA---A-----GCCCGTCGTCCGAGAAAT-----------------------T-CGCCG-------------TACT--C-CGATTTTCCAC-----G-AC---A---C--------------G--ATCCCCGA-----------------A---TTTTCGCGCG-------------------GGG------GGATGCTC----CTAATGATT-----TCTTTCAACCCTCGTTTG------------------------------------------------------------AAATATTACAATTA-ATTTCG------------ATACACCCG---------------------CAGAGCCG-CA---------------------CAAAAAATGTGAGCTGAAAA-TTTAAATGTTAAATGTGCTG
droKik1 scf7180000302412:329654-329930 + GCA------------------------CGGAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAACCCCGAACGCATCCGAACGCTCCGCACGTA---G-----GCCTG---TCCC-------CGTGTCTGTCCACCGAAAGCATC-CGCAG-------------TACACTC-CGATTCT--CGGGCACG-ATCTTAGGGC--------------A-AAT-CCCG------------------------------AG----------------------------ATATGCTC----TTAATGATT-----CCTTTCAACCCTCGC-TG------------------------------------------------------------AAGTATTGAAATTA-ATTTCG------------AAACACCCGC------------------A-GAGAGTCGGC---GATCGCTGA---AATACATCGAAAAATGTGAACAGAAAA-TTT-------AAATGTGCTG
droAna3 scaffold_12943:3838559-3838860 + GCAGGCAGG-------GCGGGCTATATCGAAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAACACTGAACGCATTCGAACGCTCCGCACGTA---G-----GCCTG---GCCGAAAAAT-----------------------C-CGCCG-------------TACTCAC-CGAT-------------------C---GA-------------GT-ATCTCGAATGTATG-----TATAAGG-GC-AGT--CGCG----------------------------AGATGATTTTGGTTAATGATT-----TCTTTCAACCCTCGT-TA---------A-------AA-----------------------------------AAAAATAAATATTAAAATTA-ATT-CA------AT-TCAAAATACCAG---------------------CAGAGGC-GCAAAAAACGAAGAAAAAAAATAAAAAAAAATGTGAATTGAAAA-TTT-------AAATGTGCTG
droBip1 scf7180000395973:58888-59216 + GCAGAC--G-------GCAGGCT--ATCGAAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAACACTGAACGCATTCGAACGCTCCGCACGTA---G-GTAGGCCTG---GCCGAAAATT-----------------------C-CGCCG-------------TAAT--C-CGCT--------CAGTG-AT---C---GCTACGCTTGCGAATGT-ATCTCAAATAAATGTACTATATAAGGAGC-TGT--CGCG----------------------------AGATGCTTTTGGTTAATGATT-----TCTTTCAACTCTCGT-TA---------A-------AA---------AACAACAACAAT--------------AATAAGAAATATTAAAATTA-ATTTTGGTATTG---------AACCAGCAAACAACAACAAC-------AAGAAGAAG-----------------------AAAAAAATGTGAATTGAAAA-TTT-------AAATGTGCTG
dp5 4_group3:7387634-7387918 + GC--------------------------AGCATGAAACCGGCCTGTCCGCCGGGCCGCCCCATGAGAACATTGAACGCATTCGAACGCTCCACACGTA---G-----GCCTA----------ACC-------------------------CCCCGTATATTTTTGTTGT----------------TG-CTT----G---C---C----------AAAAG--G---------------CAACAGAGGG---AGACGGGACGAGACGCGACTGTCTCGCTCGCACCTTTCG-CTTT------TTAACGATA-----TCTTTCAACCCTCCCCACAGTCGAT-AA-------AT-----------------------------------GTGTAAAAATATTGAAATTA-ATTTTG------------AAATACCC----------A-AACAAT----AAG--------------------------AAGAAAAAAATGTGAATTGAAAA-TTT-------AAATGTGTTG
droPer2 scaffold_1:8833133-8833417 + GC--------------------------AGCATGAAACCGGCCTGTCCGCCGGGCCGCCCCATGAGAACATTGAACGCATTCGAACGCTCCGCACGTA---G-----GCCTA----------ACC-------------------------CCCCGTATATTTTTGTTGT----------------TG-CTT----C---T---C----------AAAGG--G---------------CAACAGAGGG---AGACCGGACGAGACGCGACTGTCTCGCTCGCACCTTTCG-CTTT------TTAACGATA-----TCTTTCAACCCTCCCCACAGTCGAT-AA-------AT-----------------------------------GTGTAAAAATATTGAAATTA-ATTTTG------------AAATACCC----------A-AACAAT----AAG--------------------------AAGAAAAAAATGTGAATTGAAAA-TTT-------AAATGTGTTG
droWil2 scf2_1100000004521:8901035-8901066 - G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATGTGAATTGAAAAATT-------TAAATGTATTG
droVir3 scaffold_12963:10747935-10748240 + TT---------------C--------AC-ACAAGAAACCGGCCCG----CCG---------ATGAGAACATTGAACGCATTCGAACGCGTCGCACGTA---G-----GCCTA-----CGGAATTTCAGAGTT----------------T-CTCGATTTAAATTCGAATT----------------TGATTTCG-AT---T---C------------------------------------------------------------ACGATCAACCCCGCCGCCGCAGACC-CTTT------TTAATGTTG-----TTTTTCAACCCGTGC-ACAGGCCAAGGAATATTAAAACAACAATAAACCACCAACAATAAAAACAACATTTAATGCAATATTATTGAAATTA-ACAAAG------------ACAACACCGC--------A-CATAA------------------------------AAAATAATATAAAATGTGAATTGAAAAATT-------TGAATGTGCTG
droMoj3 scaffold_6500:19466084-19466114 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATGTGAATTGATAAATT-------TGAATGTGCTG
droGri2 scaffold_15252:4944911-4944990 + GCTTTC--GGTTTCATTC--------ACCGCAAGAAACCGGCCTGTCTGA------------TGAGAACATTAAACGCATTCGAACGCGTCGCACGTA---G-----GCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCT--------------C--------GC-GAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAAGCCCGGCCGCATCCGAACGCTCCGCACGTA---A-----GCCCG---TCAGAGAACT-------------------------CGCCG-------------TGCT--C-CGATATTCTTGGCCGCG-AT---C---C--------------A--ATCCCCGCT----------------A---GCATCGCCC-----------------------------GGATGC------GTAATGATT-----TCTTTCAACCGCCGT-GG------------------------------------------------------------AAGTATTTACATTACATTTCG------------ATACAGC-----------------------CAGAGCCCG-----------------------CAGAAGATGTGATCTGAAAA-ATTGAATGTTGAATGTGCTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................CCCG---TCAGAGAACT-------------------------CGCCG-------------........................................................................................................................................................................................................................................................................................................................................................................1917.00761000000000000000
............................................................................................CACGTA---A-----GCCCG---TCAGAGAACT-------------------------CGCC......................................................................................................................................................................................................................................................................................................................................................................................2615.00532000000000000000
............................................................................................CACGTA---A-----GCCCG---TCAGAGAACT-------------------------C.........................................................................................................................................................................................................................................................................................................................................................................................2314.00440000000000000000
............................................................................................CACGTA---A-----GCCCG---TCAGAGAACT-------------------------CG........................................................................................................................................................................................................................................................................................................................................................................................2414.00422000000000000000
.....................................................................................................A-----GCCCG---TCAGAGAACT-------------------------CG........................................................................................................................................................................................................................................................................................................................................................................................1813.00330000000000000000
...............................................................................................GTA---A-----GCCCG---TCAGAGAACT-------------------------CGCC......................................................................................................................................................................................................................................................................................................................................................................................2312.00220000000000000000
..............................................................................................CGTA---A-----GCCCG---TCAGAGAACT-------------------------CGCCG-------------........................................................................................................................................................................................................................................................................................................................................................................2512.00220000000000000000
............................................................................................CACGTA---A-----GCCCG---TCAGAGAACT-------------------------CGC.......................................................................................................................................................................................................................................................................................................................................................................................2512.00210100000000000000
.....................................................................................................A-----GCCCG---TCAGAGAACT-------------------------CGCCG-------------TG......................................................................................................................................................................................................................................................................................................................................................................2312.00220000000000000000
...........................................................................................................GCCCG---TCAGAGAACT-------------------------CGCC......................................................................................................................................................................................................................................................................................................................................................................................1912.00200200000000000000
.......................................................................................CTCCGCACGTA---A-----GCCCG---G............................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.............................................................................................................CCG---TCAGAGAACT-------------------------CGCCG-------------........................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.....................................................................................................A-----GCCCG---TCAGAGAACT-------------------------CGCCG-------------........................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.............................................................................................ACGTA---A-----GCCCG---TCAGAGAACT-------------------------CGCCG-------------........................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
....................................................................................................................................................................................................................................................................................................GC------GTAATGATT-----TCTTTCAACCGCCGT-G.....................................................................................................................................................................................................2711.00100010000000000000
........................................................................................................................GAACT-------------------------CGCCG-------------TGCT--C-CGATATTCTTG.....................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
............................................................................................CACGTA---A-----GCCCG---TCAGAGAAC....................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
...............................................................................................................G---TCAGAGAACT-------------------------CGCCG-------------TG......................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
.............................................TCCGCCGGAAAATA-TCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
...................................................................................AACGCTCCGCACGTA---A-----GC...................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
...............................................................................................................G---TCAGAGAACT-------------------------CGCCG-------------TGCT--C-CGAT............................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
...............................................................................................GTA---A-----GCCCG---TCAGAGAACT-------------------------C.........................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
..........................................................................CCGCATCCGAACGCTCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
...................................................................................................................................................................................................................................GCT----------------A---GCATCGCCC-----------------------------GGATG...........................................................................................................................................................................................................................................1811.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAAA-ATTGAATGTTGAATGTGCT.2511.00100000001000000000
.....................................................................................................A-----GCCCG---TCAGAGAACT-------------------------CGCCG-------------TGG.....................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
..........................................................................................CGCACGTA---A-----GCCCG---TCAGAGAACT-------------------------CGC.......................................................................................................................................................................................................................................................................................................................................................................................2711.00110000000000000000
............................................................................................................CCCG---TCAGAGAACT-------------------------CGCC......................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
..................................................CGGAAAATA-TCTGAGAAGCCCGGCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000000000
............................................................................................................CCCG---TCAGAGAACT-------------------------CGCCG-------------TGCT--C-CGA.............................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
.....................................................................................................A-----GCCCG---TCAGAGAACT-------------------------CGCCG-------------T.......................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
..............................................................................................................CG---TCAGAGAACT-------------------------CGCCG-------------TGC.....................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
........................................................ATA-TCTGAGAAGCCCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
...........................................................................................................GCCCG---TCAGAGAACT-------------------------CGC.......................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
...............................................................................................................G---TCAGAGAACT-------------------------CGCCG-------------TGC.....................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
......................................................................................GCTCCGCACGTA---A-----GCCCG---.............................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TACATTACATTTCG------------ATACAGC-----------------------CAGA.....................................................................2511.00100000001000000000
...............................................................................................GTA---A-----GCCCG---TCAGAGAACT-------------------------CGCCG-------------TGC.....................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
..................................................CGGAAAATA-TCTGAGAAGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
...........................................................................................GCACGTA---A-----GCCCG---TCAGAGAACT-------------------------CGCCG-------------........................................................................................................................................................................................................................................................................................................................................................................2811.00110000000000000000
.........................................................................................................................AACT-------------------------CGCCG-------------TGCT--C-CGATATTCT.......................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
..................................................................................GAACGCTCCGCACGTA---A-----GCC..................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
GCT--------------C--------GC-GAATGAAACCGGCCTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTTGAATGTGCT.1550.20100000000001000000
droSec2
GCT--------------C--------GC-GAATGAAACCGGCCTGTCCGCCGCAAAATA-TCTGAGAAGCCCGGCCGCATCCGAACGTTCCGCACGTA---A-----GCCCG---TCCGAGAACT-------------------------CGCCG-------------TGCT--C-CGATTTTCTTGGCCGCG-AT---C---C--------------A--ATCCCCGCT----------------A---GCATCGCCC-----------------------------GGATGC------GTAATGATT-----TCTTTCAACCGCCGT-GG------------------------------------------------------------AAGTATTTAAATTACATTTCG------------ATACAGC-----------------------CAGAGCCCG-----------------------CAAAAGATGTGATCTGAAAA-ATTGAATGTTGAATGTGCTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................GTTCCGCACGTA---A-----GCCCG---TC...........................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020110
.....................................................................................CGTTCCGCACGTA---A-----GCCCG---TC...........................................................................................................................................................................................................................................................................................................................................................................................................................2112.0021001
....................................................................................................................CCGAGAACT-------------------------CGCCG-------------TGCT--C-................................................................................................................................................................................................................................................................................................................................................................1911.0011000
...........................................................................................GCACGTA---A-----GCCCG---TCCGAGAACT-------------------------..........................................................................................................................................................................................................................................................................................................................................................................................2311.0010001
............................................................................................CACGTA---A-----GCCCG---TCCGAGA......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGATCTGAAAA-ATTGAATGTT..........2511.0010100
...........................................................................................GCACGTA---A-----GCCCG---TCCGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
..........................................................................CCGCATCCGAACGTTCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
....................................................CAAAATA-TCTGAGAAGCCCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-ATTGAATGTTGAATGTGCT.2211.0010010
............................................................................................CACGTA---A-----GCCCG---TCCGAGAACT-------------------------CGCC......................................................................................................................................................................................................................................................................................................................................................................................2611.0010001
...............................................................................................GTA---A-----GCCCG---TCCGAGAACT-------------------------CGCC......................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
.............................................................................................................................................................................................CGCG-AT---C---C--------------A--ATCCCCGCT----------------A---GCATCG................................................................................................................................................................................................................................................................................2511.0010100
..............................................................................ATCCGAACGTTCCGCACG................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..........................................................................................CGCACGTA---A-----GCCCG---TCCGAGAACT-------------------------CG........................................................................................................................................................................................................................................................................................................................................................................................2611.0010001
..............................................................................................CGTA---A-----GCCCG---TCCGAGAACT-------------------------CGCCG-------------TGC.....................................................................................................................................................................................................................................................................................................................................................................2811.0010010
........................................................ATA-TCTGAGAAGCCCGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................AATTACATTTCG------------ATACAGC-----------------------CAGAGCCCG-----------------------C........................................2911.0010100
...........................................................................................................GCCCG---TCCGAGAACT-------------------------CGCCG-------------TGCT--..................................................................................................................................................................................................................................................................................................................................................................2411.0010010
......................................................................................GTTCCGCACGTA---A-----GCCCG---TCCG.........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
............................................................................................CACGTA---A-----GCCCG---TCCGAGAACT-------------------------CG........................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
...........................................................................CGCATCCGAACGTTCCGCACG................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
............................................................................................CACGTA---A-----GCCCG---TCCGAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
...............................................................GAGAAGCCCGGCCGCATCCGAACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
....................................................................................ACGTTCCGCACGTA---A-----GCCCG---TCCGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
..........................................................A-TCTGAGAAGCCCGGCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000
............................................................................................................CCCG---TCCGAGAACT-------------------------CGCCG-------------TGCT--C-C...............................................................................................................................................................................................................................................................................................................................................................2511.0010010
...................................................................................................................................................................................................................................GCT----------------A---GCATCGCCC-----------------------------GGATGC------GTAAT...............................................................................................................................................................................................................................2411.0010010
.....................................................................................................A-----GCCCG---TCCGAGAACT-------------------------CGCCG-------------TG......................................................................................................................................................................................................................................................................................................................................................................2311.0011000
............................................................................................CACGTA---A-----GCCCG---TCCGAGAACT-------------------------CGC.......................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
..........................................................................................CGCACGTA---A-----GCCCG---TCCGAGAACT-------------------------CGCC......................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
dm3
GCT--------------C--------GC-GAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAAGCCCGGCCGCATCCGAACGCTCCGCACGTA---AGCTAAGCCCG---TCTGAGAACT-------------------------CGCCG-------------TGCT--C-CGATTTTCTTAGCCGCG-AT---C---C--------------A--ATCCCCGCT----------------A---GCATCGCCC-----------------------------GGATGC------GTAATGATT-----TCTTTCAACCGCCGT-GG------------------------------------------------------------AAGTATTTACATTACATTTCA------------ATACACG-----------------------CAGAGCCCG-----------------------CAA---------------AA-GTTGAATGTTGAATGTGAAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................A---AGCTAAGCCCG---TCTGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................18111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000010000000000000000000000010100000000000000001000000000100000000300000000000000000000001000
...........................................................................................GCACGTA---AGCTAAGCCCG---.............................................................................................................................................................................................................................................................................................................................................................................................................................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103020000000000000000000000000000000000000000000000000000000000000000
.........................................................................GCCGCATCCGAACGCTCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000001100100000010000001000
...........................................................................................GCACGTA---AGCTAAGCCCG---TCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000002000000000000000001000
...........................................................................................................GCCCG---TCTGAGAACT-------------------------CGCCG-------------........................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000100000000000000100000000000000000000
..........................................................................................CGCACGTA---AGCTAAGCCCG---.............................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000000000000000000000000100000100000000000000
...............................................................GAGAAGCCCGGCCGCATCCGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000002000000000100000000000000000000000000
...............................................................................................................................................................................................................................CCCCGCT----------------A---GCATCGCCC-----------------------------GGATGC------GTAAT...............................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................CCCG---TCTGAGAACT-------------------------CGCCG-------------........................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................ATCCGAACGCTCCGCACGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000
..........................................................................CCGCATCCGAACGCTCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................A---AGCTAAGCCCG---TCTGAGAACT-------------------------CGCCG-------------........................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.........................................................................GCCGCATCCGAACGCTCCGCACG................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000
...............................................................................................GTA---AGCTAAGCCCG---TCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000
...............................................................GAGAAGCCCGGCCGCATCCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...............................................................................................GTA---AGCTAAGCCCG---TCTGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000001000000000000000000000
..............................................................................ATCCGAACGCTCCGCACG................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................................................................TCCGCACGTA---AGCTAAGCCCG---.............................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................CTAAGCCCG---TCTGAGAACT-------------------------CG........................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000
...........................................................................................GCACGTA---AGCTAAGCCCG---T............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................ATACACG-----------------------CAGAGCCCG-----------------------CAA---------------A......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............................................................................................GTA---AGCTAAGCCCG---TCTGAGAACT-------------------------CGCC......................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................AGAAGCCCGGCCGCATCCGAACGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
......................................................................................GCTCCGCACGTA---AGCTAAGCCCG---.............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................GCG-AT---C---C--------------A--ATCCCCGCT----------------A---GCATCGCCC-----------------------------GG..............................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................GCACGTA---AGCTAAGCCCC---.............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TCA------------ATACACG-----------------------CAGAGCCCG-----------------------CAA---------------AA-GT..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................CTGAGAAGCCCGGCCGCATCCGAACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GCCCG---TCTGAGAACT-------------------------CGCAT-------------C.......................................................................................................................................................................................................................................................................................................................................................................2131.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TGCT--C-CGATTTTCTTAGCCGC................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................CGCTCCGCACGTA---AGCTAAGCCCG---TCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..............................................................................ATCCGAACGCTCCGCACGTA---AGCTAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................................................CCGCATCCGAACGCTCCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................GCCCG---TCTGAGAACT-------------------------CGCCG-------------TG......................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TCAACCGCCGT-GG------------------------------------------------------------AAGTATTTA...............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...............................................................GAGAAGCCCGGCCGCATCCGAACGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................AACGCTCCGCACGTA---AGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TAATGATT-----TCTTTCAACCGCCGT-G.....................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................CAACCGCCGT-GG------------------------------------------------------------AAGTAT..................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TT-----TCTTTCAACCGCCGT-GG------------------------------------------------------------AAGTATT.................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................CATCCGAACGCTCCGCAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................CCGCACGTA---AGCTAAGCCCG---.............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...........................................................................................................GCCCG---TCTGAGAACT-------------------------CGCCG-------------TGC.....................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................CGCG-AT---C---C--------------A--ATCCCCGCT----------------..........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................CACGTA---AGCTAAGCCCG---TCTGA........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................TTCAACCGCCGT-GG------------------------------------------------------------AAGTATTT................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GCCCG---TCTGAGAACT-------------------------CGC.......................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................A---AGCTAAGCCCG---TCTGAGAACT-------------------------CG........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................GAGAAGCCCGGCCGCATCCGAACGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................A---AGCTAAGCCCG---TCTGAGAACT-------------------------CGC.......................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................................................................................A---AGCTAAGCCCG---TCTGAGAAC....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................CGCTCCGCACGTA---AGCTAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TCCGCACGTA---AGCTAAGCCCG---TCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.........................................................................GCCGCATCCGAACGCTCCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................AGCCCG---TCTGAGAACT-------------------------CG........................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................CCGGAAAATA-TCTGAGAAGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................CGCTCCGCACGTA---AGCTAAGCCCG---.............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................CGCTCCGCACGTA---AGCTAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CACG-----------------------CAGAGCCCG-----------------------CAA---------------AA-GTTGAATG............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................AGCTAAGCCCG---TCTGAGAACT-------------------------..........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..................................................................................GAACGCTCCGCACGTA---AGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................A---AGCTAAGCCCG---TCTGAGAACT-------------------------..........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...................................................................................AACGCTCCGCACGTA---AGCTA......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................G---TCTGAGAACT-------------------------CGCCG-------------TGCT--C-CGA.............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................TA---AGCTAAGCCCG---TCTGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................ATCGCCC-----------------------------GGATGC------GTAATGATT-----TCTT..................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................GAGAAGCCCGGCCGCATCCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................CCCG---TCTGAGAACT-------------------------CGCCG-------------TG......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................AGCTAAGCCCG---TCTGAGAAC....................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TA-TCTGAGAAGCCCGGCCGCATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................CTCCGCACGTA---AGCTAAGCCCG---TCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................................................AATA-TCTGAGAAGCCCGGCCGCATCCGAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................AGCTAAGCCCG---TCTGAGAACT-------------------------C.........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TCGCCC-----------------------------GGATGC------GTAATGATT-----TCTT..................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................GCACGTA---AGCTAAGCCCG---TC...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................CGCATCCGAACGCTCCGCACG................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.................................................................GAAGCCCGGCCGCATCCGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.................................................................................................................................................................................GATTTTCTTAGCCGCG-AT---C---C--------------......................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................ACT-------------------------CGCCG-------------TGCT--C-CGATT...........................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................AACGCTCCGCACGTA---AGCTAAGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................GCTAAGCCCG---TCTGAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
...............................................................GAGAAGCCCGGCCGCATCCGAACGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
.......................................................................................CTCCGCACGTA---AGCTAAGCCCG---.............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................ACGCTCCGCACGTA---AGCTAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..........................................................................................CGCACGTA---AGCTAAGCCCG---TCTGA........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..........................................................................CCGCATCCGAACGCTCCGCACG................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................AAGCCCG---TCTGAGAACT-------------------------CGCCG-------------........................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................................................................................................G---TCTGAGAACT-------------------------CGCCG-------------TG......................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................A---AGCTAAGCCCG---TCTGATT......................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........................................................A-TCTGAGAAGCCCGGCCGATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................CCG---TCTGAGAACT-------------------------CGCAT-------------C.......................................................................................................................................................................................................................................................................................................................................................................19150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GCT--------------C--------GC-GAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAAGCCCGGACGCATCCGAACGCTCCGCACGTA---A-----GCCCG---TCCGAGAACT-------------------------CGCCG-------------TGCT--C-CGATTTTCTTGGCCGCG-AT---C---C--------------A--ATCCCCGCT----------------A---GCATCGCGC-----------------------------GGATGC------GTAATGACTTGAATTCTTCCAGCCGCCGT-GG------------------------------------------------------------AGGTATTAAAATTGCTTTTCG------------ATACAGC-----------------------CAGAGCCCG-----------------------CAAAAAATGTGATCTGAGAA-TTTAAATGCTAAATGTGCTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................ACGCATCCGAACGCTCCGCACG................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0022000000
.................................................................................................................................................................................................................................................................GC-----------------------------GGATGC------GTAATGACTTGAAT......................................................................................................................................................................................................................2211.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTCG------------ATACAGC-----------------------CAGAGCCCG-----------------------CA.......................................2211.0010000100
............................................................................................................CCCG---TCCGAGAACT-------------------------CGCC......................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
...........................C-GAATGAAACCGGCCTGTCCGCCGGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
..................................................................................................................................................................................................................................CGCT----------------A---GCATCGCGC-----------------------------GGATGC------....................................................................................................................................................................................................................................2011.0010000010
...............................................................................TCCGAACGCTCCGCACGTA---A-----GCCCG---TC...........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
..............................................................................ATCCGAACGCTCCGCACG................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
...............................................................GAGAAGCCCGGACGCATCCGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.................................................................GAAGCCCGGACGCATCCGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
..............................................................................ATCCGAACGCTCCGCACGTA---A-----GCCCG---.............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATGTGATCTGAGAA-TTTAAATG............2611.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAATGCTAAATGTGCTG1911.0011000000
...........................................................................CGCATCCGAACGCTCCGCACGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
............................................................................................................................................................................................................................................................................................................................TTCCAGCCGCCGT-GG------------------------------------------------------------AGGTATTAA...............................................................................................................................2411.0010000010
..................................................................................................................................................................................................AT---C---C--------------A--ATCCCCGCT----------------A---GCATCGC...............................................................................................................................................................................................................................................................................2211.0010000010
.........................................................................................................................AACT-------------------------CGCCG-------------TGCT--C-CGATT...........................................................................................................................................................................................................................................................................................................................................................1911.0010000010
...............................................................GAGAAGCCCGGACGCATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000
........................................................................................TCCGCACGTA---A-----GCCCG---TCCG.........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
droYak3
GCT--------------C--------GC-AAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAAGCCCGGACGCATCCGAACGCTCCGCACGTA---A-----GCCCG---TCCGAGAACT-------------------------CGTCG-------------TGCG--C-CGATTTTCTTGGCCGCG-ATCCCATCAC--------------A--AT--CCGCT-----------------------------------------------------------GATGC------GTAATGATT-----TCTTTCAACCGCCGT-GG------------------------------------------------------------AAGTATTAAAATTACATTTCG------------ATACTCG-----------A-TACAGC----CAGAGCCCGC----------------------AAAAAAATGTGATCTGAAAA-TTTAAATGTTAAATGTGCTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................TA---A-----GCCCG---TCCGAGAACT-------------------------CGTCG-------------TGC.....................................................................................................................................................................................................................................................................................................................................................................2612.00220000000000
...........................................................................CGCATCCGAACGCTCCGCACG................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200001100000
......................................................................................................................GAGAACT-------------------------CGTCG-------------TGCG--C-CG..............................................................................................................................................................................................................................................................................................................................................................1912.00220000000000
.........................................................................................................................AACT-------------------------CGTCG-------------TGCG--C-CGATTTT.........................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...................................................................................AACGCTCCGCACGTA---A-----GCCCG---TCCG.........................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
...................................................................................................................................................................................................................................................................................................................TT-----TCTTTCAACCGCCGT-GG------------------------------------------------------------A.......................................................................................................................................2011.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCG-----------A-TACAGC----CAGAGCCCGC----------------------.........................................2211.00100000010000
.....................................................................................CGCTCCGCACGTA---A-----GCCCG---.............................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000
..............................................................................................................CG---TCCGAGAACT-------------------------CGTCG-------------TGC.....................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
....................................................................................ACGCTCCGCACGTA---A-----GCCCG---TC...........................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...............................................................GAGAAGCCCGGACGCATCCGAACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
...............................................................................................................G---TCCGAGAACT-------------------------CGTCG-------------TGCG--C-CGAT............................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CG-----------A-TACAGC----CAGAGCCCGC----------------------AAAAAAATGT...............................2911.00100000010000
...............................................................................................................G---TCCGAGAACT-------------------------CGTCG-------------TGCG--C-CG..............................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.........................................................................GACGCATCCGAACGCTCCGCACGTA---A-----GC...................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
.......................................................................CGGACGCATCCGAACGCTCCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
..........................................................................ACGCATCCGAACGCTCCGCACG................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001000000
..............................................................................................................CG---TCCGAGAACT-------------------------CGTCG-------------TGCG--C-C...............................................................................................................................................................................................................................................................................................................................................................2311.00110000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATTACATTTCG------------ATACTCG-----------A-TACAGC----CAGA.....................................................................2911.00100000010000
..............................................................................................................CG---TCCGAGAACT-------------------------CGTCG-------------TG......................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
......................................................................................................................GAGAACT-------------------------CGTCG-------------TGCG--C-CGAT............................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.....................................................................................................................CGAGAACT-------------------------CGTCG-------------TGCG--C-C...............................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.....................................................................CCCGGACGCATCCGAACGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000
.................................................................................................................................................................................................................................................................................................................GATT-----TCTTTCAACCGCCGT-GG------------------------------------------------------------AAGTATT.................................................................................................................................2811.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGC----CAGAGCCCGC----------------------AAAA.....................................2011.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGC----CAGAGCCCGC----------------------AAAAAAATGTGAT............................2911.00100000010000
...............................................................................................................G---TCCGAGAACT-------------------------CGTCG-------------TGCG--C-C...............................................................................................................................................................................................................................................................................................................................................................2211.00110000000000
...............................................................................................................G---TCCGAGAACT-------------------------CGTCG-------------TG......................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
..................................................................................................................................................................................................................................................................................................................ATT-----TCTTTCAACCGCCGT-GG------------------------------------------------------------AAGT....................................................................................................................................2411.00100000010000
droEug1
GCC--------------T--------ACGGAATGAAACCGGCCTGTACGCCGGAAAATA-TCTGAGAACCCCGAACGCATCCGAACGCTCCGCACGTCAAAA-----ATCCG---TTCGAGAAAT------CTGACT-----------CCCGGCGAA-----------TACT--T-CAATTTTCTTCGCTTCGAAA---A---T--------------G--AT---CGAG----------------A---ATATCGCGCG----------------------------GGATGC------TTAATGATT-----TTGTTCAACCCTCGT-AAAGAAAAT-AA-------A----------------------------------------AAAATTATTAAAATTA-ATTTGT----CGATTT-----TATAC----------A-AAAAACACA-GAGAGCCAG-----------------------CGAAAGATGTGAACTGAAAA-TTTAAATGTTAAATGTGCTGSizeHit CountTotal NormTotal
No Reads
droBia1
GTC--------------C--------GCGGAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAACCCCGAACGCATCCGAGCGCTCCGCACGTA---G-----ACCCG---TCCGAGAATC-------------------------CGCCG-------------CACT--CCCGATTTTCCCAACTTCG-AC---G---C--------------G--ATCCCCAGT----------------A---GTGCCGCGGG----------------------------GGAGGC------CCAATGATT-----TCGTTCAACCCTCGT-TA------------------------------------------------------------AGATATTGAAATTC-ATTTCG------------AAAC---------------------------AGAGCCAA-----------------------CGAAAAATGTGAACTGAAAA-TTTAAATGCTAAATGTGCTGSizeHit CountTotal NormTotal
No Reads
droTak1
GTC--------------C--------GCGGAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAACCCCGAACGCATCCGAACGCTCCGCACGTA---A-----ACCCG---TCCGAGAAGT-----------------------CCCGCCT-------------TACT--T-CGATTTTCTTCGCTTCC-AA---A---C--------------G--ATCCCCAATA--------ATACAATA---ATATAGCGCG----------------------------GGATGC------CTAATGATT-----TTTTTCAACTCTCGT-TA------------------------------------------------------------AAATATTGAAATTA-ATTTCG------------ACGCAGC-----------------------GAGAG---------------------------CGAAAAATGTGAACTGAAAA-TTTAAATGTTAAATGTACTGSizeHit CountTotal NormTotal
No Reads
droEle1
GCC--------------C--------ACGGAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAACCCCGAACGCATCCGAACGCTCCGCACGTA---G-----------------TAAATC-------------------------CGCCG-------------TATT--C-CGATTTTCTTCGACACG-ATTCTC---C--------------G--ATCGCCAAT-----------ATCGCA---ATATCACACG----------------------------GGATGC------CTAATGATT-----TCTTTCAACCCTCAT-TA------------------------------------------------------------AAATTTTGGAATTA-ATTTCGATTTCGATTTCGATACACCCGC------------------AGCAGAGCCAA-----------------------CGAATAATGTGAACTGCAAA-TTTAAATGTTAAATGTGCTGSizeHit CountTotal NormTotal
No Reads
droRho1
GCCCAC--C-------CC--------ACGGAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAACCCCGAACGCATCCGAACGCTTCGCACGTA---A-----ACCCG---TTCGAGAATT-----------------------C-CTCCG-------------TACT--C-CGATTTTCTTC-----G-AT---T---C--------------G--ATCCCCAAT----------------------ATCGCGCG----------------------------GGACGC------CTAATGATT-----TCTTTCAACCCTCAT-TA------------------------------------------------------------AAATATTGAAATTA-ATTTCG------------ATACACCCG---------------------CAGAGCCAA-----------------------CGAAAAATGTGAACTGAAAA-TTTAAATGTTAAATGTGCTGSizeHit CountTotal NormTotal
No Reads
droFic1
GCC--------------C--------ACGGAATGAAACCGGCCTGTCCGCCGGAAAATA-TCAGAGAACCCCGAACGCATCCGAACGCTCCGCACGTA---A-----GCCCGTCGTCCGAGAAAT-----------------------T-CGCCG-------------TACT--C-CGATTTTCCAC-----G-AC---A---C--------------G--ATCCCCGA-----------------A---TTTTCGCGCG-------------------GGG------GGATGCTC----CTAATGATT-----TCTTTCAACCCTCGTTTG------------------------------------------------------------AAATATTACAATTA-ATTTCG------------ATACACCCG---------------------CAGAGCCG-CA---------------------CAAAAAATGTGAGCTGAAAA-TTTAAATGTTAAATGTGCTGSizeHit CountTotal NormTotal
No Reads
droKik1
GCA------------------------CGGAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAACCCCGAACGCATCCGAACGCTCCGCACGTA---G-----GCCTG---TCCC-------CGTGTCTGTCCACCGAAAGCATC-CGCAG-------------TACACTC-CGATTCT--CGGGCACG-ATCTTAGGGC--------------A-AAT-CCCG------------------------------AG----------------------------ATATGCTC----TTAATGATT-----CCTTTCAACCCTCGC-TG------------------------------------------------------------AAGTATTGAAATTA-ATTTCG------------AAACACCCGC------------------A-GAGAGTCGGC---GATCGCTGA---AATACATCGAAAAATGTGAACAGAAAA-TTT-------AAATGTGCTGSizeHit CountTotal NormTotal
No Reads
droAna3
GCAGGCAGG-------GCGGGCTATATCGAAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAACACTGAACGCATTCGAACGCTCCGCACGTA---G-----GCCTG---GCCGAAAAAT-----------------------C-CGCCG-------------TACTCAC-CGAT-------------------C---GA-------------GT-ATCTCGAATGTATG-----TATAAGG-GC-AGT--CGCG----------------------------AGATGATTTTGGTTAATGATT-----TCTTTCAACCCTCGT-TA---------A-------AA-----------------------------------AAAAATAAATATTAAAATTA-ATT-CA------AT-TCAAAATACCAG---------------------CAGAGGC-GCAAAAAACGAAGAAAAAAAATAAAAAAAAATGTGAATTGAAAA-TTT-------AAATGTGCTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................GCTCCGCACGTA---G-----GCCTG---.............................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
.................................................................GAACACTGAACGCATTCGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
........................................................................................TCCGCACGTA---G-----GCCTG---GC...........................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..................................................................................GAACGCTCCGCACGTA---G-----GCCTG---.............................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
....................................................................................ACGCTCCGCACGTA---G-----GCCTG---GCC..........................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
........................................................................GAACGCATTCGAACGCTCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
...........................................................................CGCATTCGAACGCTCCGCACG................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............................................................................TTCGAACGCTCCGCACGTA---G-----GCCTG---GC...........................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................AT-TCAAAATACCAG---------------------CAGAGGC-GCAAA............................................................2611.001000010
.................................................................................................................................................................................................................................................ATAAGG-GC-AGT--CGCG----------------------------AGATGATTTTG.....................................................................................................................................................................................................................................2611.001000010
...........................................................................................GCACGTA---G-----GCCTG---GCCGAAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
......................................................................................................................................................................................................................................GTATG-----TATAAGG-GC-AGT--CGCG----------------------------A...............................................................................................................................................................................................................................................2211.001100000
..........................................................................................................................................................................................................................GT-ATCTCGAATGTATG-----TATAAG..........................................................................................................................................................................................................................................................................................2211.001100000
.................................................................................CGAACGCTCCGCACGTA---G-----GC...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100
....................................................................................ACGCTCCGCACGTA---G-----GCC..................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.....................................................................................CGCTCCGCACGTA---G-----GCCTG---.............................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
........................................................................................................................................................CCG-------------TACTCAC-CGAT-------------------C---GA-------------GT-...................................................................................................................................................................................................................................................................................................................1911.001100000
......................................................................................GCTCCGCACGTA---G-----GCCTG---GCC..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..................................................................................GAACGCTCCGCACGTA---G-----GCCTG---GC...........................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATACCAG---------------------CAGAGGC-GC...............................................................2011.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAACGAAGAAAAAAAA............................................1930.331010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAAAAAATAAAAAAAAA..................................20110.091010000
droBip1
GCAGAC--G-------GCAGGCT--ATCGAAATGAAACCGGCCTGTCCGCCGGAAAATA-TCTGAGAACACTGAACGCATTCGAACGCTCCGCACGTA---G-GTAGGCCTG---GCCGAAAATT-----------------------C-CGCCG-------------TAAT--C-CGCT--------CAGTG-AT---C---GCTACGCTTGCGAATGT-ATCTCAAATAAATGTACTATATAAGGAGC-TGT--CGCG----------------------------AGATGCTTTTGGTTAATGATT-----TCTTTCAACTCTCGT-TA---------A-------AA---------AACAACAACAAT--------------AATAAGAAATATTAAAATTA-ATTTTGGTATTG---------AACCAGCAAACAACAACAAC-------AAGAAGAAG-----------------------AAAAAAATGTGAATTGAAAA-TTT-------AAATGTGCTGSizeHit CountTotal NormTotal
No Reads
dp5
GC--------------------------AGCATGAAACCGGCCTGTCCGCCGGGCCGCCCCATGAGAACATTGAACGCATTCGAACGCTCCACACGTA---G-----GCCTA----------ACC-------------------------CCCCGTATATTTTTGTTGT----------------TG-CTT----G---C---C----------AAAAG--G---------------CAACAGAGGG---AGACGGGACGAGACGCGACTGTCTCGCTCGCACCTTTCG-CTTT------TTAACGATA-----TCTTTCAACCCTCCCCACAGTCGAT-AA-------AT-----------------------------------GTGTAAAAATATTGAAATTA-ATTTTG------------AAATACCC----------A-AACAAT----AAG--------------------------AAGAAAAAAATGTGAATTGAAAA-TTT-------AAATGTGTTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................TCGAACGCTCCACACGTA---G-----GCCTA----------AC....................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
....................................................................................................................................................................GTTGT----------------TG-CTT----G---C---C----------AAAAG--...................................................................................................................................................................................................................................................................................................................1811.0010100000000
......................................................................................................................................................................................................................................................................ACGCGACTGTCTCGCTCGCACCT...................................................................................................................................................................................................................................................2311.0010100000000
........................................................................................TCCACACGTA---G-----GCCTA----------ACC-------------------------CCC.......................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
.....................................................................................................................................................................................................................................................................GACGCGACTGTCTCGCTCGCACC....................................................................................................................................................................................................................................................2311.0010100000000
..............................................................................ATTCGAACGCTCCACACGTA---G-----GCCTA----------AC....................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
..............................................................................ATTCGAACGCTCCACACGTA---G-----GCCTA----------ACC-------------------------..........................................................................................................................................................................................................................................................................................................................................................................................2911.0010000001000
...........................................................................CGCATTCGAACGCTCCACACG................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
............................................................................................CACGTA---G-----GCCTA----------ACC-------------------------CCCCG.....................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........................................................................................................................................................................................TG-CTT----G---C---C----------AAAAG--G---------------CAACAGAGGG---A.....................................................................................................................................................................................................................................................................................2511.0010100000000
..........................................................................................CACACGTA---G-----GCCTA----------ACC-------------------------CCCCG.....................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..............................................................................................................................................................................................................................................AACAGAGGG---AGACGGGAC.............................................................................................................................................................................................................................................................................1811.0010010000000
......................................................................................................................................................................................................................................................................ACGCGACTGTCTCGCTCGCACCTT..................................................................................................................................................................................................................................................2411.0010100000000
...............................................................GAGAACATTGAACGCATTCGAACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000001
.....................................................................................................................................................................................................................................................................GACGCGACTGTCTCGCTCGCACCTTTCG-..............................................................................................................................................................................................................................................2811.0010100000000
.............................................................ATGAGAACATTGAACGCATTCGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
......................................................................................GCTCCACACGTA---G-----GCCTA----------ACC-------------------------CCC.......................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100000
.....................................................................................................................................................................................................................................................................GACGCGACTGTCTCGCTCGCAC.....................................................................................................................................................................................................................................................2211.0010100000000
droPer2
GC--------------------------AGCATGAAACCGGCCTGTCCGCCGGGCCGCCCCATGAGAACATTGAACGCATTCGAACGCTCCGCACGTA---G-----GCCTA----------ACC-------------------------CCCCGTATATTTTTGTTGT----------------TG-CTT----C---T---C----------AAAGG--G---------------CAACAGAGGG---AGACCGGACGAGACGCGACTGTCTCGCTCGCACCTTTCG-CTTT------TTAACGATA-----TCTTTCAACCCTCCCCACAGTCGAT-AA-------AT-----------------------------------GTGTAAAAATATTGAAATTA-ATTTTG------------AAATACCC----------A-AACAAT----AAG--------------------------AAGAAAAAAATGTGAATTGAAAA-TTT-------AAATGTGTTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................ACGCTCCGCACGTA---G-----GCC..................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
.........................................................................................CCGCACGTA---G-----GCCTA----------ACC-------------------------CCC.......................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..............................................................................ATTCGAACGCTCCGCACGTA---G-----GCCTA----------......................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
...............................................................GAGAACATTGAACGCATTCGAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.............................................................................CATTCGAACGCTCCGCACGTA---G-----GCCT.................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000100
...............................................................GAGAACATTGAACGCATTCGAACGCTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..................................................................................................................................................................................................................................................GAGGG---AGACCGGACGAGACGC......................................................................................................................................................................................................................................................................2111.001100000
..................................................................................................................................................................................................................................................................................CGCTCGCACCTTTCG-CTTT------TTAACG..............................................................................................................................................................................................................................2511.001010000
droWil2
G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATGTGAATTGAAAAATT-------TAAATGTATTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
TT---------------C--------AC-ACAAGAAACCGGCCCG----CCG---------ATGAGAACATTGAACGCATTCGAACGCGTCGCACGTA---G-----GCCTA-----CGGAATTTCAGAGTT----------------T-CTCGATTTAAATTCGAATT----------------TGATTTCG-AT---T---C------------------------------------------------------------ACGATCAACCCCGCCGCCGCAGACC-CTTT------TTAATGTTG-----TTTTTCAACCCGTGC-ACAGGCCAAGGAATATTAAAACAACAATAAACCACCAACAATAAAAACAACATTTAATGCAATATTATTGAAATTA-ACAAAG------------ACAACACCGC--------A-CATAA------------------------------AAAATAATATAAAATGTGAATTGAAAAATT-------TGAATGTGCTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................ATTCGAACGCGTCGCACG................................................................................................................................................................................................................................................................................................................................................................................................................................................18114.00143110000000000000000000000000000000000000000000000000000000000000
....................................................................................ACGCGTCGCACGTA---G-----GCC..................................................................................................................................................................................................................................................................................................................................................................................................................................1817.007420100000000000000000000000000000000000000000000000000000000000
...................................................................................AACGCGTCGCACGTA---G-----GC...................................................................................................................................................................................................................................................................................................................................................................................................................................1816.006220000000000000001100000000000000000000000000000000000000000000
...................................................................................AACGCGTCGCACGTA---G-----GCCTA-----...........................................................................................................................................................................................................................................................................................................................................................................................................................2114.004100000000000000000000000000000000000000000000000000000000000030
...............................................................................TTCGAACGCGTCGCACGTA---G-----GCCT.................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002020000000000000000000000000000000000000000000000000000000000000
.................................................................................CGAACGCGTCGCACGTA---G-----GC...................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000000100000000000000000000000000000000000000000010
...................................................................................AACGCGTCGCACGTA---G-----GCC..................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000000000000000000000000000000000000000000000000000000000000
...................................................................................AACGCGTCGCACGTA---G-----GCCTA-----CG.........................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000000000000000000000000000000000000000000000000000000000000
.....................................................................ATTGAACGCATTCGAACGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................ACGCGTCGCACGTA---G-----GC...................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001000000000000000000000000000000000000000000000000000000000010000
...................................................................................AACGCGTCGCACGTA---G-----GCCT.................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000000000000000000000000000000000000000000000000000000000000
..............................................................................................CGTA---G-----GCCTA-----CGGAATTTCAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................AACGCGTCGCACGTA---G-----GCCTA-----CGGAATTT...................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................CGTCGCACGTA---G-----GCCTA-----CGGAATTT...................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000100000000000000000000000000000000000000000
....................................................................CATTGAACGCATTCGAACGCGTCGCAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000100000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................CGTGC-ACAGGCCAAGGAAT........................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................AACATTGAACGCATTCGAACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
......................................................................................GCGTCGCACGTA---G-----GCCTA-----CGGAATTT...................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000010000000000000000000000000000000000000000
..................................................................................GAACGCGTCGCACGTA---G-----GCCTA-----...........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
...............................................................GAGAACATTGAACGCATTCGAACGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000000000000000000000000000000000000000000000000000000000000
........................................................................................GTCGCACGTA---G-----GCCTA-----CG.........................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000010000000000000000000000000000000000000000000000
....................................................................CATTGAACGCATTCGAACGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................GCATTCGAACGCGTCGCACG................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TTAATGCAATATTATTGAAATT...........................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
...............................................................GAGAACATTGAACGCATTCGAACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................................................................................................................ATCAACCCCGCCGCCGCA...................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...............................................................GAGAACATTGAACGCATTCGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000010000000000
............................................................................................CACGTA---G-----GCCTA-----CGGAATTTCAGAGT.............................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000010000
..........................................................................................CGCACGTA---G-----GCCTA-----CGGAATTTCAGA...............................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
..................................................................................GAACGCGTCGCACGTA---G-----GCCTA-----CG.........................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
.................................................................................CGAACGCGTCGCACGTA---G-----GCCT.................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................AATT----------------TGATTTCG-AT---T---C------------------------------------------------------------ACGAT...................................................................................................................................................................................................................................................................2111.001000000000000000000010000000000000000000000000000000000000000000
..............................................................................................................................AGAGTT----------------T-CTCGATTTAAAT..............................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CAGAGTT----------------T-CTCGATTTAAATT.............................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAAAATT-------TGAATGTGCTG2011.001000000000000000000000000000000000000000000000000000000000001000
......................................................................TTGAACGCATTCGAACGCGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................GATTTAAATTCGAATT----------------TGATT..................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
...............................................................GAGAACATTGAACGCATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000001000000000000000000000000000000000000
droMoj3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATGTGAATTGATAAATT-------TGAATGTGCTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GCTTTC--GGTTTCATTC--------ACCGCAAGAAACCGGCCTGTCTGA------------TGAGAACATTAAACGCATTCGAACGCGTCGCACGTA---G-----GCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........................................................................AAACGCATTCGAACGCGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
...................................................................................AACGCGTCGCACGTA---G-----GCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1911.00101

Generated: 05/19/2015 at 11:50 AM