ID:

dsi_12844

 Coordinate:

3l:21019366-21019515 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-1.3 -1.1 -0.8

Flybase annnotation

five_prime_UTR [3l_21019516_21019516_+]; CDS [3l_21019517_21019718_+]; exon [3l_21019516_21019718_+]; intron [3l_21017363_21019515_+]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCATTCGATGTTCGGTGGTTATTGCTATAAAGACAAATTATAATCGTTGGGAGGCCTCTTGATTGGGTGACGTCGTCGGTGTGCGTGTGATTCACTGTGTGCCGTTTAGCTTGGGCTAGCCCAGCTTCAGCTCCAGCTACGTTCCGTAACTAAAGCTCTTTGTATATATTCCGACTTGGACTCCATAAAGCATTGTGCAGTATGCCGGGCAAGGGTAACAACCGCGATCGCATCCGGGATCCCCGCGAGG
******************************************************************************************************************************************...............................(((.....)))....****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 M023
head
 M053
female body
 SRR618934
dsim w501 ovaries
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
...................................................................................................................................................................ATATATTCCGACTTGGACTCC.................................................................. 21 0 1 3.00 3 2 1 0 0 0 0 0 0 0
........................................................................................................................................................................TTCCGACTTGGACTCCATAAAG............................................................ 22 0 1 2.00 2 0 0 2 0 0 0 0 0 0
..........................................................................................................................................ACGTTCCGTAACTAAAGCTC............................................................................................ 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...................................................................................................................................................................ATATATTCCGACTTGGACTC................................................................... 20 0 1 2.00 2 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................ATATTCCGACTTGGACTCC.................................................................. 19 0 1 2.00 2 1 1 0 0 0 0 0 0 0
.....................................TTATAATCGTTGGGAGGCCT................................................................................................................................................................................................. 20 0 1 2.00 2 0 2 0 0 0 0 0 0 0
.......................................................................................................................................................................ATTCCGACTTGGACTCCATAAAGCA.......................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.............................................................ATTGGGTGACGTCGTCGG........................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0
............................................CGTTGGGAGGCCTCTTGAT........................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................ATTATAATCGTTGGGAGGCC.................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................AATTATAATCGTTGGGAGG.................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................................................................................TGATTCACTGTGTGCCGTTTAGCTTG......................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.....................................TTATAATCGTTGGGAGGCC.................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..ATTCGATGTTCGGTGGT....................................................................................................................................................................................................................................... 17 0 1 1.00 1 0 0 0 0 1 0 0 0 0
............................................CGTTGGGAGGCCTCTTGATTGGGTGA.................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..............................AGACAAATTATAATCGTT.......................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GTAACAACCGCGATCGCATCCGG............. 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................GCATTGTGCAGTATGCCGGGCAAG..................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.......ATGTTCGGTGGTTATTGC................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................ATTCCGACTTGGACTCCATAAAG............................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................TGATTCACTGTGTGCCGTTTAGC............................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.....................................TTATAATCGTTGGGAGGCCTCTT.............................................................................................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.....................................TTATAATCGTTGGGAGGCCTCTTGA............................................................................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0
..ATTCGATGTTCGGTGGTTATTGC................................................................................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................................................GCCGTTTAGCTTGGGCTAG................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0
....................................ATTATAATCGTTGGGAGGC................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................ATCCGGGATGCCCGCG... 16 1 3 0.33 1 0 0 0 0 1 0 0 0 0
........................................TGATTGTTGGGAGACCTCTT.............................................................................................................................................................................................. 20 3 3 0.33 1 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................................CCGGTGTCCCCGCGAGG 17 2 4 0.25 1 0 0 0 0 0 0 0 0 1
........................................................................................................................................................................................................................................CCCGGTGTCCCCGCGAGG 18 3 20 0.25 5 0 0 0 0 0 0 0 5 0
..............................................................................................CTGTGAGGCGTTTAGCT........................................................................................................................................... 17 2 7 0.14 1 0 0 0 0 0 0 0 1 0
............................................................................................................................................................................................................CCGGGCAAGGGTCACCA............................. 17 2 13 0.08 1 0 0 0 0 0 0 0 1 0
.......................................................CTCTTTATGGGGTGAC................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

AGTAAGCTACAAGCCACCAATAACGATATTTCTGTTTAATATTAGCAACCCTCCGGAGAACTAACCCACTGCAGCAGCCACACGCACACTAAGTGACACACGGCAAATCGAACCCGATCGGGTCGAAGTCGAGGTCGATGCAAGGCATTGATTTCGAGAAACATATATAAGGCTGAACCTGAGGTATTTCGTAACACGTCATACGGCCCGTTCCCATTGTTGGCGCTAGCGTAGGCCCTAGGGGCGCTCC
******************************************************************...............................(((.....)))....****************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
...........................................................................................................TCGAACTCGATCGGCCCG............................................................................................................................. 18 3 20 0.20 4 0 4 0 0 0
......................ACGATATTTCTGTGTA.................................................................................................................................................................................................................... 16 1 5 0.20 1 0 0 1 0 0
.................................................................................................................................CGAGGTGGATGCAAGGCGTA..................................................................................................... 20 3 5 0.20 1 1 0 0 0 0
...........................................................................................................................CGCACTCGAGGTCGAT............................................................................................................... 16 2 20 0.15 3 0 0 0 2 1
.......................................................................................................................................CGATGCAAGGCACTGGT.................................................................................................. 17 2 7 0.14 1 1 0 0 0 0
...............................................................................................................ACCCGATCGGGTAGATG.......................................................................................................................... 17 2 8 0.13 1 0 1 0 0 0
.....................................................CGGAGAAGTAAGGCACTGC.................................................................................................................................................................................. 19 3 11 0.09 1 0 0 0 1 0
...............................................................................................................ACTCGATCGGCTCGAAG.......................................................................................................................... 17 2 13 0.08 1 0 1 0 0 0
....................................................................................................................................................................................................................CCCGTTGCTGGCGCTAG..................... 17 2 14 0.07 1 1 0 0 0 0
......................................................................................................................................GCGATGCAAGGCACTGGT.................................................................................................. 18 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:21019316-21019565 + dsi_12844 TCATTCG-ATGTTCGGTGGTTATTGCTATAAAGACAAATTATAATCGTTGGGAGGCCTCT-TGATTGGGT-GACGTCGTCGGTGTGCGTGTGA----TTCACTGTGTGCCGTTTAG-CTTG---GGCTAGCCCAGCTTCAGCTCCAGC---TACGTTCC------------G-TAACTAAAGC-TCTTTGTATATATTCCGACTTGGACT--------CCA----------TAAAG---------------------CATTGTGCAGTATGCCGGGCAAGGGTAAC------AACCGCGATCGCATCCGGGATCCCCGCGAGG
droSec2 scaffold_11:1422641-1422890 + TCATTCG-ATGTTCGGTGGTTATTGCTATAAAGACAAATTATAATCGTTGGGAGGCCTCT-TGATTGGGT-GACGTCGTCGGTGTGCGTGTGA----TTCACTGTGTGCCGTTTAG-CTTG---GGCTAGCCCAGCTTCAGCCCCAGC---TACGTTCC------------G-TAACTAAAGC-TCTTTGTATAAATTCCGACTTGGACT--------CCA----------TAAAG---------------------CATTGTGCAGTATGCCGGGCAAGGGGAAC------AACCGCGATCGCATCCGGGATCCCCGCGAGG
dm3 chr3L:21502979-21503227 + TCATTCG-TTGCTCGGTGGTTATTGCTATAAACCCTAATTATAATTATTGGGAGGCCTCT-TGATTGGGT-GACGTCGTCGGTGTGCGTGTGA----TTCACTGTGTGCCGTTTAG-CTTG---GGCTAGCCCAACTTCAGCTCCAGC---TACGTTCC------------G-TAACTAAGGTCTTT--GTATAAATTCCGACTTCGACT--------CCA----------TAAAG---------------------CGTTGTGCAGTATGCCGGGCAAGGGGAAC------AACCGCGATCGCATCCGGGATCCCCGCGAGG
droEre2 scaffold_4784:21156204-21156426 + TCATTCG-CTGTTCGGTGGTCATTGCTATAAAGGCTAATTATAATTATTGGGAGGTCTCT-TGATTGGGT-GACG---TCGGTGTGCTTGTGA----TTCACTGTGTGCCAATTAG-CTTG---GGCTAGCCTAGCT--------------TACATACC------------G-CAACTAAAA--------------TTCCGAATTCGACT--------CCA----------TAAAG---------------------CACTGTGCAGTATGCCGGGCAAGGGGAAC------AACCGCGATCGCATCCGGGATCCCCGCGAGG
droYak3 v2_chr3L_random_280:134-354 + TCATTCG-CTGTTCGGTGGTCATTGCTATAAAGACTAATTATAATCATTGGAAGGCCTCT-TAATTGGGT-GACG---TCGGTGTGCGTGTGA----TTCACTGTGTGCCAATTGG-CTTGAGCGGCTAGCT-------------------TATGTTCC------------G-TAACTAAAA--------------TTCCGACTTCGACT--------CCA----------TAAAG---------------------CACTGTGCAGTATGCCGGGCAAGGGGAAC------AACCGCGATCGCATCCGAGATCCCCGAGAGG
droEug1 scf7180000409472:322190-322428 + ACAGTCG-CTATTCGTTG-TCATTACTATAAAGACTAATTATAATTATTGGGA---CTCT-TGATTGGAT-GACG---GTGGTGCGCGTGTGA----TTCATTGTGTGCTGATCAC-TTTC---AGCTAGC--------------------TATCTTCTCATAGGCAGAGTCTAAACTAAAACCTCTCTAT--AACTCAC------GATTCCCC-CTTTCG----------CAAAG---------------------CACTGTGCAGTATGCCGGGCAAGGGTAAC------AACCGCGATCGCATAAGGGATCCCCGCGAGG
droBia1 scf7180000302377:1825796-1826017 - CCAGTCG-CAGTTCGCCG-TCATTACTGTAGG-A------ATAATTACTGGGA---CTCT-CGATTGGGT-GACG---TCGGATCGCGTGTGA----TTCATTGTGA-CTGATCAC-TTTT---GGCTAGCC-------------------TT-CTTCCCATAGACAGTGTG-TAACTAAAGC-TCTCTGT--CACTCCC------AACT--------CCG----------CGAAG---------------------CGCTGTGCAGTATGCCGGGCAAGGCGAAC------AACCGCGACCGCATCCGGGATCCCCGCGAGG
droTak1 scf7180000415388:172079-172307 + TCAGTCGCCTATTCGCTG-ACATTACTACAAAGA-TAATTAGAATTATTGAAA---CTTT-TGATTGGAT-GACG---TCGGTGCGCGTGTGA----ATCACTGTGT--CGATCAGTTTTT---GGCTAGGG-------------------TA-TTTCCGATAGGCAGTGTG-AAACTAAACA-TCTTTGT--AACTTCC------GATT--------CCT----------CAAAG---------------------CACTGTGCAGTATGCCGGGCAAGGGGAAC------AACCGCGATCGCATCCGGGATCCCCGGGAGG
droEle1 scf7180000491255:2785039-2785255 - TCAGTCCGCTGTTCGCAG-TCATTACTATA-AGACTAATTATAATCATTGGAA---CTCT-TGATTGGAT-GACG---TCGCTGCGCGTGTGA----ATCATTGTGTGTCGATCAA-AC------------------------A-----CTTG-TATCCGAAGGGC---------ACTAAAACATCTCTGT--AACTCCC------GATTC-------CCA----------AAAAG---------------------CACTGTGCAGTATGCCGGGAAAGGGGAAC------AACCGCGATCGCATCCGGGATCCCCGCGAGG
droRho1 scf7180000779324:54119-54363 - TCAGTCG-CTGTTCACTG-TCATTACTATAAAGACAAATTATAATCATTGGAA---CTCT-TGATTGGAT-GACG---TCGGTGCGCGTGTGA----TTCATTGTGTGCTGATTAA-ACTC---ACCGAG-----CCCCAGCTCGACCGCTTA-TTTCCCAAAGGCAGTGTG-TAACTAAAACCTCTCTGT--AACTCCC------GATT--------CCC----------AAAAG---------------------CATTGTGCAGTATGCCGGGCAAGGGGAAC------AACCGCGATCGCATCCGGGATCCCCGCGAGG
droFic1 scf7180000453831:328420-328646 + CCAGTCG-CTGTTCGCTG-CCATTCCTATAAAGACTAATTATTATCATTGAAA---CTGT-TGATTGGGT-GACG---TCGGTGTGCTTGTGA----TTCATTGTGTGCGGCTT-C-TTTC---GGCTAGCT-------------------TT--TTCC-CTGGGCAGTGTG-TAACTAAACT-TCTCTGT--GACTCCC------GATT--------CCA----------CAAAG---------------------CACTGTGCAGTATGCCGGGCAAGGGGAAC------AACCGTGATCGCATCCGGGATCCCCGCGAGG
droKik1 scf7180000302694:357448-357677 + TCATTTG-TTGTTCGTTG-GTTTTACTATAAAGACTAATTATATTTATTGGTAG--CTCT-CGGTTGTGAACATATTATATGTGAGCATGTGA----TTCATCTTTAT------------A---GGCC---------------TCTAA---AAAATTAA------------A-CAACTAAAACATTT--------CCCCC------AATT--------TCG----------AAAAGCTCTCGAAGCGATTCAGTCATCGCTGTGCAATATGCCGGGCAAGAGTAAC------AACCGCGACCGCATCCGCGATCCACGCGAGG
droAna3 scaffold_13337:17129632-17129867 - TCAATCG-CTGTTCGTTC-GGGAAACTATAAAGACTAATTAT------TAAG---CCCCTCCGCTCGAAT-GACGTCGTCGGTGCGCCAGTGA----ATCACTATGTGCTGA---A-C-TT---GGCTGGTGGAGATACAAATT-----CT-------T------------T-TAACTAAAACCTGTGTGC--AATTCCT------GCAT------TTCCGATCTAAAAATAAAAG---------------------CGCTGTGCAGTATGCCGGGCAGGGGGAGC---AATAATCGAGACCGCATCCGGGATCCCCGCGAGG
droBip1 scf7180000396641:618028-618270 - TCAATCG-TTGTTCGTTC-GTAAAACTATAAAGACTAATTAT------TAAG---CCCCTCCGCATGAAT-GACG---TCGGTGCGGTTGTGAATCATTCATTATGTGTTGA---A-C-TT---GGCTGGTGAAAATACAAATT-----CT-------T------------T-TAACTAAAACCTGTGTGTGCAATTCCT------GCATT--CATTTCCGATCTAAAAATAAAAG---------------------CGCTGTGCAGTATGCCGGGCAGGGGGAGC---AATAATCGAGACCGGATCCGGGATCCACGCGAGG
dp5 XR_group6:13054597-13054656 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTGTGCAATATGCCTGGCAAAATGAAC------GATCGCGATCGCATACGAGATCCCCGAGAGG
droPer2 scaffold_88:82755-82814 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTGTGCAATATGCCTGGCAAAATGAAC------GATCGCGATCGCATACGAGATCCCCGAGAGG
droWil2 scf2_1100000004540:1144308-1144367 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTGTACAATATGTCGGGGAAAAGTAAT------AAACGTGATCGCATACGAGATCCACGCGAGG
droVir3 scaffold_13049:13661903-13661990 - G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTCGATT--------CAA----------TAGAT-----------------ATTCCGCTGTGCAATATGTCCGGTAAAGGGAATAACAATAATCGCGATCGCATACGAGATCCACGCGAAG
droMoj3 scaffold_6680:13683649-13683720 + ATAATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTGTGAACCATGTCTGGCAAAGGAAATAACAATAATCGCGATCGTATTCGAGATCCACGCGAAG
droGri2 scaffold_15110:15574284-15574346 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTGTTCAATATGTCTGGCAAGGGCAGT---AATAATCGCGATCGCATTCGAGATCCGCGCGAAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCATTCG-ATGTTCGGTGGTTATTGCTATAAAGACAAATTATAATCGTTGGGAGGCCTCT-TGATTGGGT-GACGTCGTCGGTGTGCGTGTGA----TTCACTGTGTGCCGTTTAG-CTTG---GGCTAGCCCAGCTTCAGCTCCAGC---TACGTTCC------------G-TAACTAAAGC-TCTTTGTATATATTCCGACTTGGACT--------CCA----------TAAAG---------------------CATTGTGCAGTATGCCGGGCAAGGGTAAC------AACCGCGATCGCATCCGGGATCCCCGCGAGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................ATATATTCCGACTTGGACT--------CC.......................................................................................................2113.00302100000000000000
....................................................................................................................................................................................................TTCCGACTTGGACT--------CCA----------TAAAG---------------------..................................................................2212.00220000000000000000
........................................................................................................................................................ACGTTCC------------G-TAACTAAAGC-TC.........................................................................................................................................2012.00202000000000000000
...............................................................................................................................................................................................ATATATTCCGACTTGGACT--------C........................................................................................................2012.00201100000000000000
.................................................................................................................................................................................................ATATTCCGACTTGGACT--------CC.......................................................................................................1912.00201100000000000000
......................................TTATAATCGTTGGGAGGCCT.........................................................................................................................................................................................................................................................................2012.00200200000000000000
...................................................................................................................................................................................................ATTCCGACTTGGACT--------CCA----------TAAAG---------------------CA................................................................2512.00202000000000000000
...............................................................ATTGGGT-GACGTCGTCGG.................................................................................................................................................................................................................................................1811.00100000000001000000
.............................................CGTTGGGAGGCCTCT-TGAT..................................................................................................................................................................................................................................................................1911.00100100000000000000
.....................................ATTATAATCGTTGGGAGGCC..........................................................................................................................................................................................................................................................................2011.00100100000000000000
....................................AATTATAATCGTTGGGAGG............................................................................................................................................................................................................................................................................1911.00100100000000000000
..........................................................................................TGA----TTCACTGTGTGCCGTTTAG-CTTG---.......................................................................................................................................................................................................2611.00100010000000000000
......................................TTATAATCGTTGGGAGGCC..........................................................................................................................................................................................................................................................................1911.00110000000000000000
..ATTCG-ATGTTCGGTGGT...............................................................................................................................................................................................................................................................................................................1711.00100000000001000000
.............................................CGTTGGGAGGCCTCT-TGATTGGGT-GA..........................................................................................................................................................................................................................................................2611.00100010000000000000
...............................AGACAAATTATAATCGTT..................................................................................................................................................................................................................................................................................1811.00100100000000000000
.........................................................................................................................................................................................................................................................................................GTAAC------AACCGCGATCGCATCCGG.............2311.00100010000000000000
...........................................................................................................................................................................................................................................G---------------------CATTGTGCAGTATGCCGGGCAAG...........................................2411.00100010000000000000
........ATGTTCGGTGGTTATTGC.........................................................................................................................................................................................................................................................................................................1811.00110000000000000000
...................................................................................................................................................................................................ATTCCGACTTGGACT--------CCA----------TAAAG---------------------..................................................................2311.00101000000000000000
..........................................................................................TGA----TTCACTGTGTGCCGTTTAG-C.............................................................................................................................................................................................................2311.00100001000000000000
......................................TTATAATCGTTGGGAGGCCTCT-T.....................................................................................................................................................................................................................................................................2311.00110000000000000000
......................................TTATAATCGTTGGGAGGCCTCT-TGA...................................................................................................................................................................................................................................................................2511.00100000001000000000
..ATTCG-ATGTTCGGTGGTTATTGC.........................................................................................................................................................................................................................................................................................................2311.00100100000000000000
...........................................................................................................GCCGTTTAG-CTTG---GGCTAG.................................................................................................................................................................................................1911.00110000000000000000
.....................................ATTATAATCGTTGGGAGGC...........................................................................................................................................................................................................................................................................1911.00101000000000000000
droSec2
TCATTCG-ATGTTCGGTGGTTATTGCTATAAAGACAAATTATAATCGTTGGGAGGCCTCT-TGATTGGGT-GACGTCGTCGGTGTGCGTGTGA----TTCACTGTGTGCCGTTTAG-CTTG---GGCTAGCCCAGCTTCAGCCCCAGC---TACGTTCC------------G-TAACTAAAGC-TCTTTGTATAAATTCCGACTTGGACT--------CCA----------TAAAG---------------------CATTGTGCAGTATGCCGGGCAAGGGGAAC------AACCGCGATCGCATCCGGGATCCCCGCGAGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................AAATTATAATCGTTGGGAGGC...........................................................................................................................................................................................................................................................................2112.0020101
..................................................................................................................................................................................................................................................................ATTGTGCAGTATGCCGGGCAAGGG.........................................2412.0020020
...................................................................................................CACTGTGTGCCGTTTAG-CTTG---GGC....................................................................................................................................................................................................2411.0010100
..................................................................................................................................................................................................................................................................ATTGTGCAGTATGCCGGGCAAGGGG........................................2511.0010100
.................................ACAAATTATAATCGTTGGGAGGCCT.........................................................................................................................................................................................................................................................................2511.0010100
...................................................GAGGCCTCT-TGATTGGGT-............................................................................................................................................................................................................................................................1811.0010010
..........................................................................................................................................................................................................CTTGGACT--------CCA----------TAAAG---------------------CATTGTGCAGT.......................................................2711.0010001
....................................AATTATAATCGTTGGGAGGC...........................................................................................................................................................................................................................................................................2011.0010100
.CATTCG-ATGTTCGGTGGT...............................................................................................................................................................................................................................................................................................................1811.0011000
.......................................................................GACGTCGTCGGTGTGCGTGTG.......................................................................................................................................................................................................................................2111.0010001
............................................................................................................................................................................................................................A----------TAAAG---------------------CATTGTGCAGTATGCC..................................................2211.0010010
.................................ACAAATTATAATCGTTGGGAGGCC..........................................................................................................................................................................................................................................................................2411.0010100
.....................................................................................................CTGTGTGCCGTTTAG-CTTG---GG.....................................................................................................................................................................................................2111.0011000
................TGGTTATTGCTATAAAGACA...............................................................................................................................................................................................................................................................................................2011.0011000
..........................................AATCGTTGGGAGGCCTCT-TGATTGGGT-............................................................................................................................................................................................................................................................2711.0010100
................................GACAAATTATAATCGTTGG................................................................................................................................................................................................................................................................................1911.0010010
dm3
TCATTCG-TTGCTCGGTGGTTATTGCTATAAACCCTAATTATAATTATTGGGAGGCCTCT-TGATTGGGT-GACGTCGTCGGTGTGCGTGTGA----TTCACTGTGTGCCGTTTAG-CTTG---GGCTAGCCCAACTTCAGCTCCAGC---TACGTTCC------------G-TAACTAAGGTCTTT--GTATAAATTCCGACTTCGACT--------CCA----------TAAAG---------------------CGTTGTGCAGTATGCCGGGCAAGGGGAAC------AACCGCGATCGCATCCGGGATCCCCGCGAGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................................................................................................................................................AGTATGCCGGGCAAGGGG........................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000001000000
......G-TTGCTCGGTGGTTATTG..........................................................................................................................................................................................................................................................................................................1824.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000100000000010000000000000000000000000000000000000200000000000000000000000200
......G-TTGCTCGGTGGTTATTGCT........................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000000000000000000000000
......G-TTGCTCGGTGGTTATTGCTA.......................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000100
..................................................................................................TCACTGTGTGCCGTTTAG-CTTG---GGC....................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010100000
............................................................................................................................................................................................................................A----------TAAAG---------------------CGTTGTGCAGTATGCCG.................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000
....................................................................GT-GACGTCGTCGGTGTGCGTG.........................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
..........................................................CT-TGATTGGGT-GACGTCGTC...................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000
..........................................................CT-TGATTGGGT-GACGTCG.....................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.................................................................................................TTCACTGTGTGCCGTTTAG-CTTG---GGC....................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................................TATAATTATTGGGAGGCCTCT-TGATT.................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................................................................................................................................................................................................................................................CATCCGGGATCCCCGCT...1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CATTCG-TTGCTCGGTGGT...............................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................T-GACGTCGTCGGTGTGCGTGT........................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.....................................................................................................................................................................................................TCCGACTTCGACT--------CCA----------TAAAG---------------------CGTTG.............................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AATTATAATTATTGGGAG.............................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000
TCATTCG-TTGCTCGGTGG................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................TGTGCAGTATGCCGGGCAAGG..........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..........GCTCGGTGGTTATTGCTA.......................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................ATGCCGGGCAAGGGGAAC------AACCGCG........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................GGT-GACGTCGTCGGTGTGCGTG.........................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................ATTGGGT-GACGTCGTCGGT................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................GACGTCGTCGGTGTGCGTGTGA----T.................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................GCAGTATGCCGGGCAAGGGGAAC------AACC...........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCG-TTGCTCGGTGGTTATTGA.........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CCGACTTCGACT--------CCA----------TAAAG---------------------CGTTG.............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATTCG-TTGCTCGGTGGTTATTGCT........................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................CT-TGATTGGGT-GACGTCGT....................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................TTCC------------G-TAACTAAGGTCTTT--GTATA.................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................GACGTCGTCGGTGTGCGTGTG.......................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................TATAATTATTGGGAGGCCTC........................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................GACT--------CCA----------TAAAG---------------------CGTTGTGCA.........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................AAAG---------------------CGTTGTGCAGTATGCCGGGC..............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................TTGGGAGGCCTCT-TGATTGGG..............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................TT--GTATAAATTCCGACTTCGA...................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATTCG-TTGCTCGGTGGTTATTG..........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................GGCCTCT-TGATTGGGT-GACGTC......................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GCATCCGGGATCCCCGC....1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................AAATTCCGACTTCGACT--------CCA----------TAAAG---------------------CGT...............................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TTGTGCAGTATGCCGGGCAAGG..........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
..ATTCG-TTGCTCGGTGGTT..............................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......G-TTGCTCGGTGGTTATTGCTATAAA...................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTCG-TTGCTCGGTGGTTATTG..........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..............................................ATTGGGAGGCCTCT-TGAT..................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..............................................ATTGGGAGGCCTCT-TGATTGGG..............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............................ACCCTAATTATAATTATTGGG...............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................CT-TGATTGGGT-GACGTCGTCG..................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................T--------CCA----------TAAAG---------------------CGTTGTGCAGTATGCCGGG...............................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................ATAAATTCCGACTTCGACT--------CC.......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TGCGTGTGA----TTCACTGTGTGC......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................AAGGGGAAC------AACCGCGATCGCATCC...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TGGGT-GACGTCGTCGGTGTGCGT..........................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................CTCT-TGATTGGGT-GACGTCGTC...................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................AAC------AACCGCGATCGCATCCGGGA...........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCATTCG-TTGCTCGGTGGT...............................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................ACGTTCC------------G-TAACTAAGGT............................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CG-TTGCTCGGTGGTTATTG..........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................CTAGCCCAACTTCAGCTCCAG................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................ATTGGGT-GACGTCGTCGGTGT..............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
................................................................................................................................AGCCCAACTTCAGCTCCAGC---TAC.........................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................ATAATTATTGGGAGGCCTCT-TGATT.................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................CTAATTATAATTATTGGGAGGC...........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................T-GACGTCGTCGGTGTGCGTGTGA----TTC...............................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CACTGTGTGCCGTTTAG-CTTG---GGCATC.................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GCCTCT-TGATTGGGT-GACGTC......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...........................................................................................GA----TTCACTGTGTGCCGTTTAG-CTTG---G......................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATTCG-TTGCTCGGTGGTTATTGCTAT......................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..ATTCG-TTGCTCGGTGGTTAT............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TGCCGGGCAAGGGGAAC------AACCGCGA.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................C------------G-TAACTAAGGTCTTT--GTATA.................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.........................................................................................................................................................................................................................................................................AGTATGCCGGGCAAGGGGA.......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...TTCG-TTGCTCGGTGGTTATTGCTATAA....................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................TTATAATTATTGGGAGGCCTCT-TGAT..................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................................................................................................................................................................................................................................................ATGCCGGGCAAGGGGAAC------...............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TGCTATAAACCCTAATTA..........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................ACT--------CCA----------TAAAG---------------------CGTTGTGCA.........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................................................................TTGTGCAGTATGCCGGGCAAGGGGAAC------...............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....TCG-TTGCTCGGTGGTTATTGCT........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................GGCCTCT-TGATTGGGT-GACGTCGTC...................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................TGGGT-GACGTCGTCGGTG...............................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................TATTGGGAGGCCTCT-TGATTGGGT-............................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......G-TTGCTCGGTGGTTATTGAA........................................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
................................................................TTGGGT-GACGTCGTCGGTTGT.............................................................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TCATTCG-CTGTTCGGTGGTCATTGCTATAAAGGCTAATTATAATTATTGGGAGGTCTCT-TGATTGGGT-GACG---TCGGTGTGCTTGTGA----TTCACTGTGTGCCAATTAG-CTTG---GGCTAGCCTAGCT--------------TACATACC------------G-CAACTAAAA--------------TTCCGAATTCGACT--------CCA----------TAAAG---------------------CACTGTGCAGTATGCCGGGCAAGGGGAAC------AACCGCGATCGCATCCGGGATCCCCGCGAGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................A--------------TTCCGAATTCGACT--------CCA----------TAAA........................................................................................2211.0011000000
..ATTCG-CTGTTCGGTGGTCATTGC.........................................................................................................................................................................................................................................................................................................2311.0010100000
...................................................................................GTGCTTGTGA----TTCACTGTGTGCCAATTA................................................................................................................................................................................................................2811.0010001000
..........................................AATTATTGGGAGGTCTCT-TGATTGGGT-............................................................................................................................................................................................................................................................2711.0010000100
..........................................................................................................................................................................................................................................................................................GAAC------AACCGCGATCGCATCCGGGAT..........2511.0011000000
.................................................................................................................................GCCTAGCT--------------TACATACC------------G-CA....................................................................................................................................................1911.0011000000
.................................................................TGGGT-GACG---TCGGTGTGCTTGTG.......................................................................................................................................................................................................................................2311.0010000100
.................................................................................................................................................................................................................................................................CACTGTGCAGTATGCCGGGCAAGGG.........................................2511.0010000100
......G-CTGTTCGGTGGTCATTGCTA.......................................................................................................................................................................................................................................................................................................2111.0010000100
.......................................................................GACG---TCGGTGTGCTTGTGA----TT................................................................................................................................................................................................................................2111.0010001000
droYak3
TCATTCG-CTGTTCGGTGGTCATTGCTATAAAGACTAATTATAATCATTGGAAGGCCTCT-TAATTGGGT-GACG---TCGGTGTGCGTGTGA----TTCACTGTGTGCCAATTGG-CTTGAGCGGCTAGCT-------------------TATGTTCC------------G-TAACTAAAA--------------TTCCGACTTCGACT--------CCA----------TAAAG---------------------CACTGTGCAGTATGCCGGGCAAGGGGAAC------AACCGCGATCGCATCCGAGATCCCCGAGAGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................CTCT-TAATTGGGT-GACG---TCGGTGTG.............................................................................................................................................................................................................................................2521.50300000000003
...........................ATAAAGACTAATTATAATCATTGGAAGGC...........................................................................................................................................................................................................................................................................2911.00100000010000
...........................................................................................GA----TTCACTGTGTGCCAATTGG-..............................................................................................................................................................................................................2120.50101000000000
........................................ATAATCATTGGAAGGCCTCT-TAATTGG...............................................................................................................................................................................................................................................................2720.50101000000000
....................................................................................................ACTGTGTGCCAATTGG-CTTGAGCGGCTA..................................................................................................................................................................................................2820.50100000010000
..............................................................................................................................................................................................................GACT--------CCA----------TAAAG---------------------CACTGTGCA.........................................................2120.50101000000000
.......................................................................................................GTGTGCCAATTGG-CTTGAGCGGCTAGCT-------------------T...........................................................................................................................................................................2920.50100000010000
.............................................CATTGGAAGGCCTCT-TAATTGGGT-............................................................................................................................................................................................................................................................2420.50100000010000
..........................................................................................................................................................................................................CTTCGACT--------CCA----------TAAAG---------------------CACTGTGCA.........................................................2520.50101000000000
..........................................AATCATTGGAAGGCCTCT-TA....................................................................................................................................................................................................................................................................2020.50100000010000
..........................................AATCATTGGAAGGCCTCT-TAATTGGGT-............................................................................................................................................................................................................................................................2720.50100000010000
....................................................................................................................................................................................AA--------------TTCCGACTTCGACT--------CC.......................................................................................................1820.50110000000000
...............................................................................................................................................................................ACTAAAA--------------TTCCGACTTCGACT--------CCA----------TA..........................................................................................2620.50101000000000
..ATTCG-CTGTTCGGTGGTCAT............................................................................................................................................................................................................................................................................................................2020.50100000010000
..............................................ATTGGAAGGCCTCT-TAATTGG...............................................................................................................................................................................................................................................................2120.50101000000000
droEug1
ACAGTCG-CTATTCGTTG-TCATTACTATAAAGACTAATTATAATTATTGGGA---CTCT-TGATTGGAT-GACG---GTGGTGCGCGTGTGA----TTCATTGTGTGCTGATCAC-TTTC---AGCTAGC--------------------TATCTTCTCATAGGCAGAGTCTAAACTAAAACCTCTCTAT--AACTCAC------GATTCCCC-CTTTCG----------CAAAG---------------------CACTGTGCAGTATGCCGGGCAAGGGTAAC------AACCGCGATCGCATAAGGGATCCCCGCGAGGSizeHit CountTotal NormTotal
No Reads
droBia1
CCAGTCG-CAGTTCGCCG-TCATTACTGTAGG-A------ATAATTACTGGGA---CTCT-CGATTGGGT-GACG---TCGGATCGCGTGTGA----TTCATTGTGA-CTGATCAC-TTTT---GGCTAGCC-------------------TT-CTTCCCATAGACAGTGTG-TAACTAAAGC-TCTCTGT--CACTCCC------AACT--------CCG----------CGAAG---------------------CGCTGTGCAGTATGCCGGGCAAGGCGAAC------AACCGCGACCGCATCCGGGATCCCCGCGAGGSizeHit CountTotal NormTotal
No Reads
droTak1
TCAGTCGCCTATTCGCTG-ACATTACTACAAAGA-TAATTAGAATTATTGAAA---CTTT-TGATTGGAT-GACG---TCGGTGCGCGTGTGA----ATCACTGTGT--CGATCAGTTTTT---GGCTAGGG-------------------TA-TTTCCGATAGGCAGTGTG-AAACTAAACA-TCTTTGT--AACTTCC------GATT--------CCT----------CAAAG---------------------CACTGTGCAGTATGCCGGGCAAGGGGAAC------AACCGCGATCGCATCCGGGATCCCCGGGAGGSizeHit CountTotal NormTotal
No Reads
droEle1
TCAGTCCGCTGTTCGCAG-TCATTACTATA-AGACTAATTATAATCATTGGAA---CTCT-TGATTGGAT-GACG---TCGCTGCGCGTGTGA----ATCATTGTGTGTCGATCAA-AC------------------------A-----CTTG-TATCCGAAGGGC---------ACTAAAACATCTCTGT--AACTCCC------GATTC-------CCA----------AAAAG---------------------CACTGTGCAGTATGCCGGGAAAGGGGAAC------AACCGCGATCGCATCCGGGATCCCCGCGAGGSizeHit CountTotal NormTotal
No Reads
droRho1
TCAGTCG-CTGTTCACTG-TCATTACTATAAAGACAAATTATAATCATTGGAA---CTCT-TGATTGGAT-GACG---TCGGTGCGCGTGTGA----TTCATTGTGTGCTGATTAA-ACTC---ACCGAG-----CCCCAGCTCGACCGCTTA-TTTCCCAAAGGCAGTGTG-TAACTAAAACCTCTCTGT--AACTCCC------GATT--------CCC----------AAAAG---------------------CATTGTGCAGTATGCCGGGCAAGGGGAAC------AACCGCGATCGCATCCGGGATCCCCGCGAGGSizeHit CountTotal NormTotal
No Reads
droFic1
CCAGTCG-CTGTTCGCTG-CCATTCCTATAAAGACTAATTATTATCATTGAAA---CTGT-TGATTGGGT-GACG---TCGGTGTGCTTGTGA----TTCATTGTGTGCGGCTT-C-TTTC---GGCTAGCT-------------------TT--TTCC-CTGGGCAGTGTG-TAACTAAACT-TCTCTGT--GACTCCC------GATT--------CCA----------CAAAG---------------------CACTGTGCAGTATGCCGGGCAAGGGGAAC------AACCGTGATCGCATCCGGGATCCCCGCGAGGSizeHit CountTotal NormTotal
No Reads
droKik1
TCATTTG-TTGTTCGTTG-GTTTTACTATAAAGACTAATTATATTTATTGGTAG--CTCT-CGGTTGTGAACATATTATATGTGAGCATGTGA----TTCATCTTTAT------------A---GGCC---------------TCTAA---AAAATTAA------------A-CAACTAAAACATTT--------CCCCC------AATT--------TCG----------AAAAGCTCTCGAAGCGATTCAGTCATCGCTGTGCAATATGCCGGGCAAGAGTAAC------AACCGCGACCGCATCCGCGATCCACGCGAGGSizeHit CountTotal NormTotal
No Reads
droAna3
TCAATCG-CTGTTCGTTC-GGGAAACTATAAAGACTAATTAT------TAAG---CCCCTCCGCTCGAAT-GACGTCGTCGGTGCGCCAGTGA----ATCACTATGTGCTGA---A-C-TT---GGCTGGTGGAGATACAAATT-----CT-------T------------T-TAACTAAAACCTGTGTGC--AATTCCT------GCAT------TTCCGATCTAAAAATAAAAG---------------------CGCTGTGCAGTATGCCGGGCAGGGGGAGC---AATAATCGAGACCGCATCCGGGATCCCCGCGAGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................CACTATGTGCTGA---A-C-TT---GGCTGG.................................................................................................................................................................................................2312.002020000
.....................................................................................................CTATGTGCTGA---A-C-TT---GGCC...................................................................................................................................................................................................1912.002020000
...........................................................................................................................................AAATT-----CT-------T------------T-TAACTAAAACCTGTGTGC--..................................................................................................................................2711.001010000
....................................................................................................................................................................................................................................................................................................AATCGAGACCGCATCCGGGATCCC.......2411.001010000
...................................................................................................CACTATGTGCTGA---A-C-TT---GGCTGGT................................................................................................................................................................................................2411.001010000
...................................................................................................CACTATGTGCTGA---A-C-TT---GGCTGGTGGA.............................................................................................................................................................................................2711.001100000
..............................................................................................................GA---A-C-TT---GGCTGGTGGAGA...........................................................................................................................................................................................1811.001000010
droBip1
TCAATCG-TTGTTCGTTC-GTAAAACTATAAAGACTAATTAT------TAAG---CCCCTCCGCATGAAT-GACG---TCGGTGCGGTTGTGAATCATTCATTATGTGTTGA---A-C-TT---GGCTGGTGAAAATACAAATT-----CT-------T------------T-TAACTAAAACCTGTGTGTGCAATTCCT------GCATT--CATTTCCGATCTAAAAATAAAAG---------------------CGCTGTGCAGTATGCCGGGCAGGGGGAGC---AATAATCGAGACCGGATCCGGGATCCACGCGAGGSizeHit CountTotal NormTotal
No Reads
dp5
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTGTGCAATATGCCTGGCAAAATGAAC------GATCGCGATCGCATACGAGATCCCCGAGAGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................................GAAC------GATCGCGATCGCATACGAGATCCCC......2911.0010000000001
............................................................................................................................................................................................................................................................................................AC------GATCGCGATCGCATACGAG............2111.0010100000000
.............................................................................................................................................................................................................................................................................................C------GATCGCGATCGCATACGAGA...........2111.0010100000000
.....................................................................................................................................................................................................................................................................GTGCAATATGCCTGGCAAAAT.........................................2111.0010100000000
........................................................................................................................................................................................................................................................................CAATATGCCTGGCAAAATGAAC------...............................2211.0010100000000
............................................................................................................................................................................................................................................................................................AC------GATCGCGATCGCATACGA.............2011.0010100000000
droPer2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTGTGCAATATGCCTGGCAAAATGAAC------GATCGCGATCGCATACGAGATCCCCGAGAGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................GGCAAAATGAAC------GATCGCGAT......................2112.002200000
............................................................................................................................................................................................................................................................................................AC------GATCGCGATCGCATACGAGAT..........2311.001001000
.........................................................................................................................................................................................................................................................................AATATGCCTGGCAAAATGA.......................................1911.001000001
droWil2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTGTACAATATGTCGGGGAAAAGTAAT------AAACGTGATCGCATACGAGATCCACGCGAGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................................ATTGTACAATATGTCGGGG..............................................1911.00101000
droVir3
G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTCGATT--------CAA----------TAGAT-----------------ATTCCGCTGTGCAATATGTCCGGTAAAGGGAATAACAATAATCGCGATCGCATACGAGATCCACGCGAAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................AAAGGGAATAACAATAATCG..........................2011.001000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................ATCGCGATCGCATACGAGATCCACGCGAA.2911.001000000000000000000000000000010000000000000000000000000000000000
droMoj3
ATAATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTGTGAACCATGTCTGGCAAAGGAAATAACAATAATCGCGATCGTATTCGAGATCCACGCGAAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................GTTGTGAACCATGTCTGGC..............................................1911.001100000
droGri2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTGTTCAATATGTCTGGCAAGGGCAGT---AATAATCGCGATCGCATTCGAGATCCGCGCGAAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 11:34 AM