ID:

dsi_12842

 Coordinate:

3r:13681484-13681764 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.3 -24.2 -24.1

Flybase annnotation

intergenic

No Repeatable elements found

mature
star
  1. 2r:6224461-6224475 +
  2. dsi_12842  3r:13681688-13681702 +
  3. node_54255:140-154 +
  4. node_690:77-91 +
  5. node_61655:78-92 +
  6. node_45077:90-104 +
  7. node_41298:966-980 +
  8. node_63203:871-885 +

Sense Strand Reads

GGCGTCCAACATATTCGCTGCCGAGAAAGATAATGGAGTGAAAAACAACGGTAAGCTTGAGGTCCAAATACCATCCAATATCAAACCCGCATATGTATATGTGATGATGTGTGATCCCTAGCAATCGAAAAAAGAAAATCAAATCAATCTTAGTTGCTTGTTCTATCATTTGATTGGGAAATTGTGCCCATGACGAGATATGTCTTTAGATAATGTCGTGGATTCTGGTCAATTAAATGCTTATTAAATGTGTATCGTTTTCTTCCCGTTCTCGTTCTTCTTTTTTTCCTACCCCCGCTCTATATCTTTTCTTTTCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGAACTATGTCT
***********************************************************************************************************..(((........)))........((((((((...(((((...(((.........)))....)))))((((........))))((((.(((...((((...(((...)))..))))))).)))).....((((...........)))).)))))))).....**************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 M053
female body
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
..........................AAGATAATGGAGTGAAAAACAACGGTGA....................................................................................................................................................................................................................................................................................................................................... 28 1 1 2.00 2 0 0 2 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................TGCAGTACGACAAGGAGCTCACAGA.............................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................TACGACAAGGAGCTCACAGATTCT.......................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..............................TAATGGAGTGAAAAACAACGGTGA....................................................................................................................................................................................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0
....TCCAACATATTCGCTGCCGAGAAAGA............................................................................................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................CCGAGAAAGATAATGG......................................................................................................................................................................................................................................................................................................................................................... 16 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................................TGTGTGATCCCTAGCAATCGAAAAAAGA...................................................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........TATTCGCTGCCGAGAAAGATAATGGAG....................................................................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0
......CAACATATTCGCTGCCGAGAAAGATAA............................................................................................................................................................................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................TCGTTTTCTTCCCGT................................................................................................................ 15 0 8 0.63 5 0 5 0 0 0 0 0 0 0
........................................................................................................................................................................TTTGATTGTGAAATTTTGCC................................................................................................................................................................................................. 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0
.................................................GGTAAGGTCGAGGTCCAAAA........................................................................................................................................................................................................................................................................................................................ 20 3 3 0.33 1 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................................CAATTTAATGCTTATTAA...................................................................................................................................... 18 1 6 0.33 2 0 0 0 0 0 1 1 0 0
.............TACGCTGCCGAGAAAG................................................................................................................................................................................................................................................................................................................................................................ 16 1 3 0.33 1 0 1 0 0 0 0 0 0 0
..................................GGAGTGAAAAAGAAC............................................................................................................................................................................................................................................................................................................................................ 15 1 20 0.15 3 0 2 0 0 0 0 0 0 1
..................................................................................................................................................ATGTTAGTTACTTGGTCTAT....................................................................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 0 0 0 0 1 0
......................................................................................................................TGGCGATCGAAAAAAGAAAA................................................................................................................................................................................................................................................... 20 2 8 0.13 1 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................................CAATTAAAAGCTTATTAA...................................................................................................................................... 18 1 11 0.09 1 0 0 0 0 0 0 1 0 0
..........................................................................................................................................................................................CCCATGGCGCGATATGT.................................................................................................................................................................................. 17 2 12 0.08 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................TTTGATTCGGAAATT...................................................................................................................................................................................................... 15 1 20 0.05 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................................ACTTGAAATATGTCT 15 1 20 0.05 1 0 1 0 0 0 0 0 0 0
...............................AAGGGAGTGAAAAAC............................................................................................................................................................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 1
................................................................................................................................................................................................................................................................................................CTACCCTCGCTGTATAAC........................................................................... 18 3 20 0.05 1 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

CCGCAGGTTGTATAAGCGACGGCTCTTTCTATTACCTCACTTTTTGTTGCCATTCGAACTCCAGGTTTATGGTAGGTTATAGTTTGGGCGTATACATATACACTACTACACACTAGGGATCGTTAGCTTTTTTCTTTTAGTTTAGTTAGAATCAACGAACAAGATAGTAAACTAACCCTTTAACACGGGTACTGCTCTATACAGAAATCTATTACAGCACCTAAGACCAGTTAATTTACGAATAATTTACACATAGCAAAAGAAGGGCAAGAGCAAGAAGAAAAAAAGGATGGGGGCGAGATATAGAAAAGAAAAGATGCATAGAAACGTCATGCTGTTCCTCGAGTGTCTAAGATAAAGTAACCATGAACTTGATACAGA
****************************************************************************************************************..(((........)))........((((((((...(((((...(((.........)))....)))))((((........))))((((.(((...((((...(((...)))..))))))).)))).....((((...........)))).)))))))).....*********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR618934
dsim w501 ovaries
 M023
head
 SRR902008
ovaries
..................................................................................................................................................................................................................................................................................AAGAAGAAAAAGAGGATGGCGGCGA.................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TACAGAAATCTATGTCAGCAA................................................................................................................................................................. 21 3 2 0.50 1 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................................................AGCAAAAGAAGGGCA................................................................................................................ 15 0 8 0.38 3 0 1 0 0 0 2 0 0
...........................GCTATTACCTCACCTGTTGTT............................................................................................................................................................................................................................................................................................................................................. 21 3 5 0.20 1 0 1 0 0 0 0 0 0
..........................................................................................................................................AGTTTAGTTAGAATCT................................................................................................................................................................................................................................... 16 1 6 0.17 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................CAGGCAAGAGCAAGAAGAA................................................................................................... 19 2 6 0.17 1 0 0 0 0 0 0 1 0
........................................................................................................................................................................................................................................................................................................................AAAGATGCAGAGGAACGT................................................... 18 2 7 0.14 1 0 0 0 0 1 0 0 0
........................................................................TCGGTTATAGTTTGG...................................................................................................................................................................................................................................................................................................... 15 1 7 0.14 1 0 0 0 1 0 0 0 0
..............................................................AGGCTTATGGTAGTTTAT............................................................................................................................................................................................................................................................................................................. 18 2 8 0.13 1 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................GTCTAAGATAAAGTG................... 15 1 14 0.07 1 0 1 0 0 0 0 0 0
..................................................................................................................................TTTCTTTTAGTTTAGGT.......................................................................................................................................................................................................................................... 17 1 14 0.07 1 0 0 1 0 0 0 0 0
...........................................................................................................................TAGCTTTTTTCTTTT................................................................................................................................................................................................................................................... 15 0 18 0.06 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................AAGGAAAAAAGGATGAGGGT.................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 1
........................................................................................................................................................................................................................................................................................................................AAAGAGGCATAGAAACAT................................................... 18 2 20 0.05 1 0 0 0 1 0 0 0 0
...........................................TTATTGCCATTCGAAGTG................................................................................................................................................................................................................................................................................................................................ 18 3 20 0.05 1 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................TCTAAGATAAAGTGA.................. 15 1 20 0.05 1 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:13681434-13681814 + dsi_12842 GGCGTCCAACATATTCGCTGCCGAGAAAGATAATGGAGTGAAAAACAACGGTAAGCTTGAGGTCCAA-------------------------ATACCATCCAA--T-ATCAAAC----CC-G---------------------------------CA-T------ATGTATAT----GTGATGATGTGTGATC--CCTAGCAATCG------AA----AAAA---GAAA--A-TCAAATCAATCTTAGTTGCTTGTTCTATCATTTG------------------------------------ATTGGGAAATTGTG-------------------------------------------------------------------CCC--ATGACGA---GATATGTC-TTTAGATAATGTC------------GTGGAT--TCT---GGTCA-----ATTAAATGCTTATT-AAATG----TGTATCGTTTT-CTTCCCG-----------------------------------------------------TTCTCGTTCT-----------------------TC--TTTTTTT--------------CCT---ACCCCCGCTCTATA--------TC----TTTT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TG--TCT
droSec2 scaffold_0:14545348-14545493 + GGCATCCAACATATTCGCTGCCGAGAAAGATAATGGAGTGAAAAACAACGGTAAGCTTGAGGTCTAA-------------------------ATACCATCCAA--T-ACCAAAC----AC-C---------------------------------CA-T------ATGTATAT----GTTATGATGTGTGATC--CCTAGCAATCG------AA----AAAA---GAAA--A-TCAAATCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3R:7419027-7419404 - GGCGTCCAACATATTCGCTGCCGAGAAAGATAATGGAGTGAAAAACAACGGTAAGCTTGAG--------------------------------TACCATCCAT--T-ATCGAAC----CCCC---------------------------------CA-T------ATGTATAT----GTGATGATGTGTGATC--CCTAGCAATCG------AA----AAAAAATGAAA--A-TTAAATCAATCTTAGTTGCTTGTTCTATCATTTA------------------------------------ATTGGAA-ATTGTG-------------------------------------------------------------------CCC--ATGATGT---GATATGTT-TTTAGATATTGCC------------GTGGAT--TCT---GGTCT-----ATTAAATGCTTATT-AAATG----TGTATCGTTTT-CTTCCCG-----------------------------------------------------TTCTCGTTCT-----------------------TC--TTTTTTTT-------------CCT---ACCCCCGCTCTATA--------TC----TTTT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TG--TCT
droEre2 scaffold_4770:14200690-14201069 + GGCGTCCAACATATTCGCTGCCGAGAAAGATAATGGAGTGAAAAACAACGGTAAGCTTAGGGTCTAA-------------------------ATACCACTCAA--T-ATCATAC----C--C---------------------------------C---------ATGCATAT----GT---GATGTGTGATC--CCCAGCAATCT------AA----AAAA-----AA--A-TTAAATCAACCTTAGTTGCTTGCTCTATTATTTG------------------------------------ATTGGGAAATTGTG-----------------------------------------------------------CCCATGTGCCC--ATGAT-----GAGATGTC-TATAGATAATGCC------------GTGGAT--TTT---GGTCT-----ATTAAATGCTTATT-AAATG----TGTATCGTTTT-CTTCCCG-----------------------------------------------------TTCTCGTTCT-----------------------TC--TTTTTTTT-------------CCT---ACCCCTGCTCTATA--------TC----TTTT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TG--TCT
droYak3 3R:17003759-17004161 + GGCGTCCAACATATTCGCGGCCGAGAAAGATAATGGAGTGAAAAACAACGGTAAGCTTAAGGTCTAA-------------------------CCACCACCCAATAT-ATC----CA-CC--C---------------------------------CA-TATATGTATGTATATGTATG---TGATGTGTGATC--CCTAGCAATCA------AACGATCAAAAATGATA--A-TCAAATCAACCTTAGTTGCTTGTTCTATTATTTG------------------------------------ATTGGGATATTGTG-------------------------------------------------------------------CCC--ATGATGAAAGAAGATGTC-TTTAGATTATGCC------------GTGGAT--TCT---GGTCT-----ATTAAATGCTTATT-AAATG----TGTATCGTTTT-CTTCCCG-----------------------------------------------------TTCTCGTTCT-----------------------TC--TTTTTTT--------------CCCCAAATCCCCGCTCTATA--------TC----TTTT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TGTCTCT
droEug1 scf7180000409797:1055144-1055512 - GGCGTCCAACATATTTGCTGCCGAGAAAGATGGTGGAGTGAAAAACAACGGTAAGACCCAGGTCAAG-------------------------ATACTAAACCC-ATTTTC----CA-TC-CCTTTAAAT----------------------------------------------------------GTGATC--CCTGGCAATTACAAAGGAA----AA----------------AATGAACTTTAGTTGCTTGTTCTATTATTTGA-----------------------------------ATTGGAAAATTGTG------------TG-----------------------------------------------------CCTATATGATGA---AAGATGTC-TATAGATGATGAT------------GTGGAT--TAT---GGTCT-----TTTAAATGCTTATT-AAATG----TCTATCGTTTT-CTTCCCG-----------------------------------------------------TTCTCGTTCT-----------------------TC--TTTTTTT--------------CCT----ATCCCGCTCTATA--------TC----TTTTTCT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TG--TCT
droBia1 scf7180000302136:3380894-3381237 + GGCGTCCAACATATTCGCTGCCGAGAAAGATAATGGAGTGAAAAACAACGGTAGGTTCCAGGTCAAC----------ATTGTAG--------ACACCCC----------------------C--TAAAA--------------------------------------------------------GTGATATC--CCTAGCAAAGT-----GAA----AAAA---A----TATATATATAAACTTCAGTTGCTTGTTCTATTATTTA------------------------------------ATTGGAAAAT--------------------------------------------------------------------------------------ATGATGTC-TTTAGATGATGCT------------GTGG----TCT---GGTCT-----ATTAAATGCTTATT-AAATG----TCTATCGTTTT-CTTCCCG-----------------------------------------------------TTCTCGTTCT-----------------------TC--TTTTTTC--------------CCT---CCCCCCGCTCTATA--------TC----TTTT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TG--TCT
droTak1 scf7180000415310:11061-11411 - GGCGTCCAACATATTCGCAGCCGAGAAAGATAATGGAGTGAAAAACAACGGTAGGTTCC--------------------------------------------------------A-CC--C------TTTGTTT-------------------------------TATATA----------GATGTGTGATCCCCCTAGCAA---------AA----TGAA---GA--ATATATATATAAACTTTAGTTGCTTGTTCTATTATTTG------------------------------------ATTGGAAAATTGTG-------------------------------------------------------------------CCT--ATGATAT---AAGATGTC-CATAGATGATGCA------------GTGGAT--TCT---GGTCT-----ATTAAATGCTTATT-AAATG----TCTATCGTTTT-CTTCCCG-----------------------------------------------------TTCTCGTTCT-----------------------TC--TTTTTTC---------------CT---TACCCCGCTCTATA--------TC----TTTT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TG--TCT
droEle1 scf7180000491080:2275381-2275751 + GGTGTCCAACATATTCGCTGCCGAGAAAGATAATGGAGTGAAAAACAACGGTAAGTTTCAGGACAAA-------------------------AGGTCATCCCA--T-ATC----CT-TC-CTTATAGAT----------------------------------------------------------GTGATT--CCCAGCAATTA-AAT-GAA----AAAA---AAAAATATATATATAAACTTTAGTTGCTTGCTCTATTATTTG------------------------------------ATTTGAAAA-TGTG------------GT-----------------------------------------------------CCC--A------AATAAAATGTC---TAGATGATGCA------------GTGGAT--TCT---GGTGT-----ATTTAATGCTTATT-AAATG----TCCATCGTTTT-CTTCCCG-----------------------------------------------------TTCTCGTTCT-----------------------TC--TTTTTTC---------------CT---TTCCCCGCTCTATA--------TC----TTTT-CT--TTATCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TGTGTCT
droRho1 scf7180000779338:236787-237148 + GGTGTCCAACATATTCGCTGCCGAGAAAGATAATGGAGTGAAAAACAACGGTAAGTCCCTGGTCAAG-------------------------ATGCCAACCTA--T-ATC----CC-TC-CTTGTAAAT----------------------------------------------------------GTGATT--CCCAGCAATTA------AA----TAAA-----AA--A-ATATATGAACTTTAGTTGCTTGCTCGATTATTTG------------------------------------ATTTCTA-ATTGTT------------GT-----------------------------------------------------TG---AA-----AATAAGACGTC-TTTAGATGATGCA------------GTGGAT--TCT---GGTCT-----TTAAAATGCTTATT-AAATG----TCTATCGTTTT-CTTCCCG-----------------------------------------------------TTCTTGTTCT-----------------------TC--TTTTTTC---------------CT---TCCCCCGCTCTATA--------TC----TTTT-CT--TTATCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TG--TCT
droFic1 scf7180000453488:414449-414815 + GGCCTCCAACATATTCGCTGCCGAGAAGGATAATGGAGTGAAAAACAACGGTAAGCATCGGGTTAGA-------------------------ATACCAACCTG--TAATC----CTATC-CATT----------------------------------------------------------CAAGTGTAATC--CCCAGCAATCG------AA----AAGA-----AA--A----TATGAACTTTAGTTGCTTGTTCTATTATTTG------------------------------------ATTGGAAAATTGTG-------------------------------------------------------------------CAA-AAAGAT-----GATATGTCCTTTAGATGATACGT-----------GTGGAT--TCT---GGTCTAA---TTAAAATGCTTATT-AAATG----TCTATCGTTTT-CTTCCCG-----------------------------------------------------TTCTCGTTCT-----------------------TC--TTTTTTCC-------------CCT---CCCCCCGCTCTATA--------TC----TTTT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TG--TCT
droKik1 scf7180000302355:796130-796509 - GGTGTCCAACATTTTTGCTGCCGAGAAAGATAATGGAGTGAAAAATAACGGTAAGTTAAAGGTCGCA--------------------ACAGAATA-----T-A--T-ACCAAAT----AT-------------TT-------------------------------CTTATA----------GCTGTGTGATT---------ATTTTATTGGAA----AAAA---GAAA--C-TTGATTTGATTTTAAT--------------TTTG------------------------------------ATTGGAAAACTGTG-------------------------------------------------------------------CTT--AAGA-------CGACGTC-CTTAGATGAT-----------------GGAT--TCTTTTTGATT-----ATTAAATGCTTATT-AAATG----TCTATCGTTTT-CTTCCCGTT-----------------------------------------------CTTGTTCTCGTTCTC--GTTCTTCTTTATTTATTTTT-T--CCTTCG---------------CCT-ACCCCCCCGCTCTATA-TT-----TC----TTTT-CT--TTTTCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TG--TCT
droAna3 scaffold_13340:13864726-13864903 - GA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTCTTATAGATT----T------------AAGGGT--TCA---GGTTAAAAATATTAAATGCTTA------TG----TGTCTCGTTTT-CTTGTC------------------------------------------------------TTTTTGTT--------------------------C--TTTTTTT--------------CCC---CCCGTCGCTCTATA--------TC----TTTT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AT-TA--TG--TCT
droBip1 scf7180000396615:517264-517560 - GGCCTCCAACATATTCGCTGCCGAGAAGGATAATGGAGTTAAAAACAACGGTAAGTTTGAGGGTTAAGTATCCGTTGGATGGGAG---------------------------AT----A-----------------------------------------CATATC----TA------------------------------------------------------------------------------------------------------------------------------------------------G-------------------------------------------------------------------CTT--A----------TGATGTC-TATAGTTTATGGTTATATATCAGAGAAGGGCTCTCA---GGTTA-----ATTAAATGCTTAT----GTG----TGTCTCGTTTTTCTTCTCG-----------------------------------------------------TTCTTTTTCT-----------------------TT--TCTTTTC--------------CTC---CCTCCCGCTCTATA--------TC----TTTT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AT-TA--TG--TCT
dp5 2:26002364-26002727 + GGTGTCCAACATATTCTCCGTCGAGAAGGACAATAGCGTGAAGAATACTGGTAAGTGGAAGGACGGA----------GATGGAAACAACACAAT-------------CCCCC--CC-GC-CCAATAGATGTGCTC------------------CCCA-TCCATGTC----CA---------------GTG---------GCCCCCG------AA----AAAA---GC--TTA---------------TTTATTTGTGCTTTCCTTTCCCTTTGTGTTT-------------------------------------------------------------------------------TGTGATGTGG--GGGGAACCCCATCCCCC----------------------------------------------------------------CT-----TGGAGATGCTTATTGAAATG----TCTATCGTTTT-CTT---G-----------------------------------------------------TTCTCGTTCT-----------------------CC--CCCCCTC-TCCTTCTTTTGCT------CCCCCCGCTCTACTGTTTTCTCTCTTTTTTGT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA---------------
droPer2 scaffold_6:1333618-1333993 + GGTGTCCAACATATTCTCCGTCGAGAAGGACAATAGCGTGAAGAATACTGGTAAGTGGAAGGACGGA----------GATGGAAGT--CCCAATAACCCCCC-------------A-CC-CCAATAGCTGTGCTC------------------CCCA-TCCATGTC----CA---------------GTGGCCCC--------CCG------AA----AAAA---GC--TTA---------------TTTATTTGTGCTTTCCTTTCCCTTTGTGTTT-------------------------------------------------------------------------------TGTGATGTGGGGGGGGAACCCCATCCCCC----------------------------------------------------------------CT-----TGGAGATGCTTATTGAAATG----TCTATCGTTTT-CTT---G-----------------------------------------------------TTCTCGTTCT-----------------------CC--CCC-CTC-TCCTTCTTTTGCT------CCCCCCGCTCTACTGTTTTCTCTCTTTTTTGT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGAGAA-TA--CA--TAC
droWil2 scf2_1100000004902:7797044-7797521 - GATTTCAAATATATTCTCAGCCGATAAGGATGGCGCTATTAAAAATAACGGTAAGTGAAATAAC---------------------------------------------------------CAATAGTTGGGTTAAGTCAATTTCATTTAGTTTGTATTAAATTTA----AA---------------GTCTCGTC--------TAA------AA----TAAA---GC--TTT---------------TTTA-----GCTTCACTTTGTTTTTATGTCTGAAGTTCTTATGATTTATTTTTTAAATGTGTAAGTTTAGTGATGAAAAATTAAAAATTATTATATGTACTACATGTAATTATATTGTAAGAGAAAAATGCTTTTT------------------------------------------------------------T---ACCCT-----GCAGAGTTCTTATT-AAATGTCTATATATCGTTTT-CTTTTCTTCTATTTCAACCGAATTGGATAAAAAACCCAACGTCCCCCTACCAATGTCCTACTCCCTTTCTTCTTTCCTCCTTCATCTGTTTCTTTTCTTTTTTT--------------CTC---TCTCTCTCTTTATA--------------------------TATATGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTA--------------------
droVir3 scaffold_12855:502966-503071 + GTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATC-GACTG----TTTCTCGTTTT-C----------------------------------------------------------------CTCTT-----------------------TC--TC-----------------------------------------------TC----TTTC-TT--TT-CCTATTTATCTTTCCAGTACGGCAAGGAGCTCACAGATTCTACTTTATGGGTACATAA-A-------------
droMoj3 scaffold_6540:1851899-1851981 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCCGTTTT-----------------------CC--TTTTCTC------------------------------------------TC----TTTC-TT--TT-TCTATATATCTTTACAGTGCGGCAAGGAGCTCACAGATTCTATTACATTGGTA--------------------
droGri2 scaffold_14830:1333760-1333912 + T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTACT-GAATG----TTTCTCGATAT-CCATTTT-----------------------------------------------------CTCTCTCTCT-----------------------CT--CTCTCTCT-------------CTC---TCTCTTTCTCTTTT--------TC----TTTT-TTTTTTCTATATATATCTTTACAGTACGGCAAGGAGCTCACAGATTCTATTTCATTGGTACATAA-ATATATACATATTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GGCGTCCAACATATTCGCTGCCGAGAAAGATAATGGAGTGAAAAACAACGGTAAGCTTGAGGTCCAA-------------------------ATACCATCCAA--T-ATCAAAC----CC-G---------------------------------CA-T------ATGTATAT----GTGATGATGTGTGATC--CCTAGCAATCG------AA----AAAA---GAAA--A-TCAAATCAATCTTAGTTGCTTGTTCTATCATTTG------------------------------------ATTGGGAAATTGTG-------------------------------------------------------------------CCC--ATGACGA---GATATGTC-TTTAGATAATGTC------------GTGGAT--TCT---GGTCA-----ATTAAATGCTTATT-AAATG----TGTATCGTTTT-CTTCCCG-----------------------------------------------------TTCTCGTTCT-----------------------TC--TTTTTTT--------------CCT---ACCCCCGCTCTATA--------TC----TTTT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TG--TCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTACGACAAGGAGCTCACAGA....................................2511.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGACAAGGAGCTCACAGATTCT................................2411.00110000000000000000
....TCCAACATATTCGCTGCCGAGAAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
....................CCGAGAAAGATAATGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000000001000000
........................................................................................................................................................................................TGTGTGATC--CCTAGCAATCG------AA----AAAA---GA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
...........TATTCGCTGCCGAGAAAGATAATGGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
......CAACATATTCGCTGCCGAGAAAGATAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTTT-CTTCCCG-----------------------------------------------------T................................................................................................................................................................................1580.63500000000005000000
droSec2
GGCATCCAACATATTCGCTGCCGAGAAAGATAATGGAGTGAAAAACAACGGTAAGCTTGAGGTCTAA-------------------------ATACCATCCAA--T-ACCAAAC----AC-C---------------------------------CA-T------ATGTATAT----GTTATGATGTGTGATC--CCTAGCAATCG------AA----AAAA---GAAA--A-TCAAATCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....TCCAACATATTCGCTGCCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
............ATTCGCTGCCGAGAAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
.........................AAAGATAATGGAGTGAAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
................GCTGCCGAGAAAGATAATGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...............................AATGGAGTGAAAAACAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
dm3
GGCGTCCAACATATTCGCTGCCGAGAAAGATAATGGAGTGAAAAACAACGGTAAGCTTGAG--------------------------------TACCATCCAT--T-ATCGAAC----CCCC---------------------------------CA-T------ATGTATAT----GTGATGATGTGTGATC--CCTAGCAATCG------AA----AAAAAATGAAA--A-TTAAATCAATCTTAGTTGCTTGTTCTATCATTTA------------------------------------ATTGGAA-ATTGTG-------------------------------------------------------------------CCC--ATGATGT---GATATGTT-TTTAGATATTGCC------------GTGGAT--TCT---GGTCT-----ATTAAATGCTTATT-AAATG----TGTATCGTTTT-CTTCCCG-----------------------------------------------------TTCTCGTTCT-----------------------TC--TTTTTTTT-------------CCT---ACCCCCGCTCTATA--------TC----TTTT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TG--TCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........ATATTCGCTGCCGAGAAAGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000042002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTCGCTGCCGAGAAAGATAATGGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2518.0080000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000030000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000
................................ATGGAGTGAAAAACAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100200002000000000000000000000000000000000000000000
............ATTCGCTGCCGAGAAAGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000010
...........................................................................................................................................................................................................................................AAATCAATCTTAGTTGCTTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCCAACATATTCGCTGCCGAGAAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............TTCGCTGCCGAGAAAGATAATGGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGACAAGGAGCTCACAGATTCTATT.............................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........TATTCGCTGCCGAGAAAGATAATGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GCTGCCGAGAAAGATAATGGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000001000000000000000000000000000
............ATTCGCTGCCGAGAAAGATAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000
..........ATATTCGCTGCCGAGAAAGATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................GAGAAAGATAATGGAGTGAAAAACAACGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TATTCGCTGCCGAGAAAGATAATGGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GAAAGATAATGGAGTGAAAAACAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
.............TTCGCTGCCGAGAAAGATAATGGAGTGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AATGGAGTGAAAAACAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GTCCAACATATTCGCTGCCGAGAAAGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.........................AAAGATAATGGAGTGAAAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000
........................GAAAGATAATGGAGTGAAAAACAACGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GCCGAGAAAGATAATGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGATTCTATTTCATTGGTACT..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CGAGAAAGATAATGGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CGTCCAACATATTCGCTGCCGAGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TGTATAT----GTGATGATGTGTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................ATAT----GTGATGATGTGTGATC--.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................GAGAAAGATAATGGAGTGAAAAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GCCGAGAAAGATAATGGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TGCCGAGAAAGATAATGGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCT-----ATTAAATGCTTATT-AAATG----TGTATC...................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AACATATTCGCTGCCGAGAAAGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CCGAGAAAGATAATGGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCC------------GTGGAT--TCT---GGTCT-----AT...............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........ACATATTCGCTGCCGAGAAAGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...........TATTCGCTGCCGAGAAAGATAATGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCAGTACGACAAGGAGCTCACAGA....................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................AAGATAATGGAGTGAAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.....................CGAGAAAGATAATGGAGTGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................TGGAGTGAAAAACAACGGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TTGGAA-ATTGTG-------------------------------------------------------------------CCC--ATGATGT---GAT........................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GAAAGATAATGGAGTGAAAAACAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTATT-AAATG----TGTATCGTT................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCG-----------------------------------------------------TTCTCGTTCT-----------------------TC--TTTTTTT.....................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAT--TCT---GGTCT-----ATTAAATGCTTATT-..................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GATAATGGAGTGAAAAACAACGGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................TCATTTA------------------------------------ATTGGAA-ATTGTG-------------------------------------------------------------------C.........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGTATCTTTGCAGTA......................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AAGCTTGAG--------------------------------TACCATCCAT--T-ATCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CAACATATTCGCTGCCGAGAAAGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
............................GATAATGGAGTGAAAAACAACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CATATTCGCTGCCGAGAAAGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AAGATAATGGAGTGAAAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCAGTACGACAAGGAGCTCACA......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................GCTGCCGAGAAAGATAATGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC--TTTTTTTT-------------CCT---ACCCCCGCTCTAT....................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGATATTGCC------------GTGGAT--TCT---GGTC.......................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGACAAGGAGCTCACAG.....................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AATGGAGTGAAAAACAACGGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GAAAGATAATGGAGTGAAAAACAACGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCGTTCT-----------------------TC--TTTTTTTT-------------CCT---ACC..............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AAAGATAATGGAGTGAAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGATATTGCC------------GTGGAT--TCT---GG.........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TCGCTGCCGAGAAAGATAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................CTGCCGAGAAAGATAATGGAGTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................A-ATTGTG-------------------------------------------------------------------CCC--ATGATGT---GATATGT....................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----TGTATCGTTTT-CTTCCCG-----------------------------------------------------TT...............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CTGCCGAGAAAGATAATGGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TATTCGCTGCCGAGAAAGATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..............................TAATGGAGTGAAAAACAACGGTAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............TCGCTGCCGAGAAAGATAATGGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG-----------------------------------------------------TTCTCGTTCT-----------------------TC--TTTTTTTT-------------CC.....................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCG-----------------------------------------------------TTCTCGTTCT-----------------------TC--TTTTTTTT-------------.......................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TGTGTGATC--CCTAGCAATCG------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TAATGGAGTGAAAAACAACGGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................AT----GTGATGATGTGTGATC--.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................CATTTA------------------------------------ATTGGAA-ATTGTG-------------------------------------------------------------------CCC--ATGAT................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AAAGATAATGGAGTGAAAAACAACGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................AAGATAATGGAGTGAAAAACAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........CATATTCGCTGCCGAGAAAGATAATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--TCT---GGTCT-----ATTAAATGCTTA.....................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.............................ATAATGGAGTGAAAAACAACGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.........................AAAGATAATGGAGTGAAAAACAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GATAATGGAGTGAAAAACAACGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................ATGTATAT----GTGATGATGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................AA----AAAAAATGAAA--A-TTAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AGATAATGGAGTGAAAAACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ATATTCGCTGCCGAGAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----TTTT-CT--TT-TCTACGTATCTT.............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GAAAGATAATGGAGTGAAAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......CAACATATTCGCTGCCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GATAATGGAGTGAAAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GCTGCCGAGAAAGATAATGGAGTGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT-AAATG----TGTATCGTTTT-CTTCCCG-----------------------------------------------------T................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................GAGAAAGATAATGGAGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GATAATGGAGTGAAAAACAACGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AAGATAATGGAGTGAAAAACAACGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGTACGACAAGGAGCTCACAGA....................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................GATGATGTGTGATC--CCTAGCAATCG------AA----................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ATTCGCTGCCGAGAAAGATAATGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TATTCGCTGCCGAGAAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CATATTCGCTGCCGAGAAAGATAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................TGGAGTGAAAAACAACGGTATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TCGCTGCCGAGAAAGATAATGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................AA----AAAAAATGAAA--A-TTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GGCGTCCAACATATTCGCTGCCGAGAAAGATAATGGAGTGAAAAACAACGGTAAGCTTAGGGTCTAA-------------------------ATACCACTCAA--T-ATCATAC----C--C---------------------------------C---------ATGCATAT----GT---GATGTGTGATC--CCCAGCAATCT------AA----AAAA-----AA--A-TTAAATCAACCTTAGTTGCTTGCTCTATTATTTG------------------------------------ATTGGGAAATTGTG-----------------------------------------------------------CCCATGTGCCC--ATGAT-----GAGATGTC-TATAGATAATGCC------------GTGGAT--TTT---GGTCT-----ATTAAATGCTTATT-AAATG----TGTATCGTTTT-CTTCCCG-----------------------------------------------------TTCTCGTTCT-----------------------TC--TTTTTTTT-------------CCT---ACCCCTGCTCTATA--------TC----TTTT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TG--TCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATG----TGTATCGTTTT-CTTCCCG-----------------------------------------------------TT...............................................................................................................................................................................2411.0010000100
.......................AGAAAGATAATGGAGTGAAAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
...................GCCGAGAAAGATAATGGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
droYak3
GGCGTCCAACATATTCGCGGCCGAGAAAGATAATGGAGTGAAAAACAACGGTAAGCTTAAGGTCTAA-------------------------CCACCACCCAATAT-ATC----CA-CC--C---------------------------------CA-TATATGTATGTATATGTATG---TGATGTGTGATC--CCTAGCAATCA------AACGATCAAAAATGATA--A-TCAAATCAACCTTAGTTGCTTGTTCTATTATTTG------------------------------------ATTGGGATATTGTG-------------------------------------------------------------------CCC--ATGATGAAAGAAGATGTC-TTTAGATTATGCC------------GTGGAT--TCT---GGTCT-----ATTAAATGCTTATT-AAATG----TGTATCGTTTT-CTTCCCG-----------------------------------------------------TTCTCGTTCT-----------------------TC--TTTTTTT--------------CCCCAAATCCCCGCTCTATA--------TC----TTTT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TGTCTCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................AGATAATGGAGTGAAAAACAACGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2519.00900000000009
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGACAAGGAGCTCACAGATTCT................................2411.00110000000000
.............................................................................................................................................................................GTATG---TGATGTGTGATC--CCTAGCAATCA------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGACAAGGAGCTCACA......................................1911.00100100000000
............................................................................................................................................................................................................................................................................................................................G-------------------------------------------------------------------CCC--ATGATGAAAGAAGATGTC-..................................................................................................................................................................................................................................................................................................................................2211.00100000010000
..................GGCCGAGAAAGATAATGGAGTGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................GATTATGCC------------GTGGAT--TCT---GGT........................................................................................................................................................................................................................................................................................2111.00100000010000
...................................................................................................................................................................................................................................................................ATTATTTG------------------------------------ATTGGGATATTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.......................AGAAAGATAATGGAGTGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.............................ATAATGGAGTGAAAAACAACGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
........................GAAAGATAATGGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000000001
droEug1
GGCGTCCAACATATTTGCTGCCGAGAAAGATGGTGGAGTGAAAAACAACGGTAAGACCCAGGTCAAG-------------------------ATACTAAACCC-ATTTTC----CA-TC-CCTTTAAAT----------------------------------------------------------GTGATC--CCTGGCAATTACAAAGGAA----AA----------------AATGAACTTTAGTTGCTTGTTCTATTATTTGA-----------------------------------ATTGGAAAATTGTG------------TG-----------------------------------------------------CCTATATGATGA---AAGATGTC-TATAGATGATGAT------------GTGGAT--TAT---GGTCT-----TTTAAATGCTTATT-AAATG----TCTATCGTTTT-CTTCCCG-----------------------------------------------------TTCTCGTTCT-----------------------TC--TTTTTTT--------------CCT----ATCCCGCTCTATA--------TC----TTTTTCT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TG--TCTSizeHit CountTotal NormTotal
No Reads
droBia1
GGCGTCCAACATATTCGCTGCCGAGAAAGATAATGGAGTGAAAAACAACGGTAGGTTCCAGGTCAAC----------ATTGTAG--------ACACCCC----------------------C--TAAAA--------------------------------------------------------GTGATATC--CCTAGCAAAGT-----GAA----AAAA---A----TATATATATAAACTTCAGTTGCTTGTTCTATTATTTA------------------------------------ATTGGAAAAT--------------------------------------------------------------------------------------ATGATGTC-TTTAGATGATGCT------------GTGG----TCT---GGTCT-----ATTAAATGCTTATT-AAATG----TCTATCGTTTT-CTTCCCG-----------------------------------------------------TTCTCGTTCT-----------------------TC--TTTTTTC--------------CCT---CCCCCCGCTCTATA--------TC----TTTT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TG--TCTSizeHit CountTotal NormTotal
No Reads
droTak1
GGCGTCCAACATATTCGCAGCCGAGAAAGATAATGGAGTGAAAAACAACGGTAGGTTCC--------------------------------------------------------A-CC--C------TTTGTTT-------------------------------TATATA----------GATGTGTGATCCCCCTAGCAA---------AA----TGAA---GA--ATATATATATAAACTTTAGTTGCTTGTTCTATTATTTG------------------------------------ATTGGAAAATTGTG-------------------------------------------------------------------CCT--ATGATAT---AAGATGTC-CATAGATGATGCA------------GTGGAT--TCT---GGTCT-----ATTAAATGCTTATT-AAATG----TCTATCGTTTT-CTTCCCG-----------------------------------------------------TTCTCGTTCT-----------------------TC--TTTTTTC---------------CT---TACCCCGCTCTATA--------TC----TTTT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TG--TCTSizeHit CountTotal NormTotal
No Reads
droEle1
GGTGTCCAACATATTCGCTGCCGAGAAAGATAATGGAGTGAAAAACAACGGTAAGTTTCAGGACAAA-------------------------AGGTCATCCCA--T-ATC----CT-TC-CTTATAGAT----------------------------------------------------------GTGATT--CCCAGCAATTA-AAT-GAA----AAAA---AAAAATATATATATAAACTTTAGTTGCTTGCTCTATTATTTG------------------------------------ATTTGAAAA-TGTG------------GT-----------------------------------------------------CCC--A------AATAAAATGTC---TAGATGATGCA------------GTGGAT--TCT---GGTGT-----ATTTAATGCTTATT-AAATG----TCCATCGTTTT-CTTCCCG-----------------------------------------------------TTCTCGTTCT-----------------------TC--TTTTTTC---------------CT---TTCCCCGCTCTATA--------TC----TTTT-CT--TTATCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TGTGTCTSizeHit CountTotal NormTotal
No Reads
droRho1
GGTGTCCAACATATTCGCTGCCGAGAAAGATAATGGAGTGAAAAACAACGGTAAGTCCCTGGTCAAG-------------------------ATGCCAACCTA--T-ATC----CC-TC-CTTGTAAAT----------------------------------------------------------GTGATT--CCCAGCAATTA------AA----TAAA-----AA--A-ATATATGAACTTTAGTTGCTTGCTCGATTATTTG------------------------------------ATTTCTA-ATTGTT------------GT-----------------------------------------------------TG---AA-----AATAAGACGTC-TTTAGATGATGCA------------GTGGAT--TCT---GGTCT-----TTAAAATGCTTATT-AAATG----TCTATCGTTTT-CTTCCCG-----------------------------------------------------TTCTTGTTCT-----------------------TC--TTTTTTC---------------CT---TCCCCCGCTCTATA--------TC----TTTT-CT--TTATCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TG--TCTSizeHit CountTotal NormTotal
No Reads
droFic1
GGCCTCCAACATATTCGCTGCCGAGAAGGATAATGGAGTGAAAAACAACGGTAAGCATCGGGTTAGA-------------------------ATACCAACCTG--TAATC----CTATC-CATT----------------------------------------------------------CAAGTGTAATC--CCCAGCAATCG------AA----AAGA-----AA--A----TATGAACTTTAGTTGCTTGTTCTATTATTTG------------------------------------ATTGGAAAATTGTG-------------------------------------------------------------------CAA-AAAGAT-----GATATGTCCTTTAGATGATACGT-----------GTGGAT--TCT---GGTCTAA---TTAAAATGCTTATT-AAATG----TCTATCGTTTT-CTTCCCG-----------------------------------------------------TTCTCGTTCT-----------------------TC--TTTTTTCC-------------CCT---CCCCCCGCTCTATA--------TC----TTTT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TG--TCTSizeHit CountTotal NormTotal
No Reads
droKik1
GGTGTCCAACATTTTTGCTGCCGAGAAAGATAATGGAGTGAAAAATAACGGTAAGTTAAAGGTCGCA--------------------ACAGAATA-----T-A--T-ACCAAAT----AT-------------TT-------------------------------CTTATA----------GCTGTGTGATT---------ATTTTATTGGAA----AAAA---GAAA--C-TTGATTTGATTTTAAT--------------TTTG------------------------------------ATTGGAAAACTGTG-------------------------------------------------------------------CTT--AAGA-------CGACGTC-CTTAGATGAT-----------------GGAT--TCTTTTTGATT-----ATTAAATGCTTATT-AAATG----TCTATCGTTTT-CTTCCCGTT-----------------------------------------------CTTGTTCTCGTTCTC--GTTCTTCTTTATTTATTTTT-T--CCTTCG---------------CCT-ACCCCCCCGCTCTATA-TT-----TC----TTTT-CT--TTTTCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AC-TA--TG--TCTSizeHit CountTotal NormTotal
No Reads
droAna3
GA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTCTTATAGATT----T------------AAGGGT--TCA---GGTTAAAAATATTAAATGCTTA------TG----TGTCTCGTTTT-CTTGTC------------------------------------------------------TTTTTGTT--------------------------C--TTTTTTT--------------CCC---CCCGTCGCTCTATA--------TC----TTTT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AT-TA--TG--TCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACGACAAGGAGCTCACAGATT..................................2411.001100000
droBip1
GGCCTCCAACATATTCGCTGCCGAGAAGGATAATGGAGTTAAAAACAACGGTAAGTTTGAGGGTTAAGTATCCGTTGGATGGGAG---------------------------AT----A-----------------------------------------CATATC----TA------------------------------------------------------------------------------------------------------------------------------------------------G-------------------------------------------------------------------CTT--A----------TGATGTC-TATAGTTTATGGTTATATATCAGAGAAGGGCTCTCA---GGTTA-----ATTAAATGCTTAT----GTG----TGTCTCGTTTTTCTTCTCG-----------------------------------------------------TTCTTTTTCT-----------------------TT--TCTTTTC--------------CTC---CCTCCCGCTCTATA--------TC----TTTT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA-AT-TA--TG--TCTSizeHit CountTotal NormTotal
No Reads
dp5
GGTGTCCAACATATTCTCCGTCGAGAAGGACAATAGCGTGAAGAATACTGGTAAGTGGAAGGACGGA----------GATGGAAACAACACAAT-------------CCCCC--CC-GC-CCAATAGATGTGCTC------------------CCCA-TCCATGTC----CA---------------GTG---------GCCCCCG------AA----AAAA---GC--TTA---------------TTTATTTGTGCTTTCCTTTCCCTTTGTGTTT-------------------------------------------------------------------------------TGTGATGTGG--GGGGAACCCCATCCCCC----------------------------------------------------------------CT-----TGGAGATGCTTATTGAAATG----TCTATCGTTTT-CTT---G-----------------------------------------------------TTCTCGTTCT-----------------------CC--CCCCCTC-TCCTTCTTTTGCT------CCCCCCGCTCTACTGTTTTCTCTCTTTTTTGT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGA---------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................AGAAGGACAATAGCGTGAAGAATACTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000003
...............CTCCGTCGAGAAGGACAATAGCGTGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020200000000
................TCCGTCGAGAAGGACAATAGCGTGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000001000
......................GAGAAGGACAATAGCGTGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010000
.........................AAGGACAATAGCGTGAAGAATACTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000001
...GTCCAACATATTCTCCGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......CAACATATTCTCCGTCGAGAAGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..........ATATTCTCCGTCGAGAAGGACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..........ATATTCTCCGTCGAGAAGGACAATAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100000
...........................GGACAATAGCGTGAAGAATACTGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..........ATATTCTCCGTCGAGAAGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................GAGAAGGACAATAGCGTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010000
............ATTCTCCGTCGAGAAGGACAATAGCGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000001000
...............CTCCGTCGAGAAGGACAATAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..........................AGGACAATAGCGTGAAGAATACTGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
........................GAAGGACAATAGCGTGAAGAATACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000001
................................ATAGCGTGAAGAATACTGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
................................................TGGTAAGTGGAAGGACGGA----------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000001
......................GAGAAGGACAATAGCGTGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
GGTGTCCAACATATTCTCCGTCGAGAAGGACAATAGCGTGAAGAATACTGGTAAGTGGAAGGACGGA----------GATGGAAGT--CCCAATAACCCCCC-------------A-CC-CCAATAGCTGTGCTC------------------CCCA-TCCATGTC----CA---------------GTGGCCCC--------CCG------AA----AAAA---GC--TTA---------------TTTATTTGTGCTTTCCTTTCCCTTTGTGTTT-------------------------------------------------------------------------------TGTGATGTGGGGGGGGAACCCCATCCCCC----------------------------------------------------------------CT-----TGGAGATGCTTATTGAAATG----TCTATCGTTTT-CTT---G-----------------------------------------------------TTCTCGTTCT-----------------------CC--CCC-CTC-TCCTTCTTTTGCT------CCCCCCGCTCTACTGTTTTCTCTCTTTTTTGT-CT--TT-TCTACGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTACTTGAGAA-TA--CA--TACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAGCTCACAGATTCTATTT............................2211.001000001
................................ATAGCGTGAAGAATACTGAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
............................GACAATAGCGTGAAGAATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
..............................CAATAGCGTGAAGAATACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.....CCAACATATTCTCCGTCGAGAAGGACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
........................GAAGGACAATAGCGTGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
droWil2
GATTTCAAATATATTCTCAGCCGATAAGGATGGCGCTATTAAAAATAACGGTAAGTGAAATAAC---------------------------------------------------------CAATAGTTGGGTTAAGTCAATTTCATTTAGTTTGTATTAAATTTA----AA---------------GTCTCGTC--------TAA------AA----TAAA---GC--TTT---------------TTTA-----GCTTCACTTTGTTTTTATGTCTGAAGTTCTTATGATTTATTTTTTAAATGTGTAAGTTTAGTGATGAAAAATTAAAAATTATTATATGTACTACATGTAATTATATTGTAAGAGAAAAATGCTTTTT------------------------------------------------------------T---ACCCT-----GCAGAGTTCTTATT-AAATGTCTATATATCGTTTT-CTTTTCTTCTATTTCAACCGAATTGGATAAAAAACCCAACGTCCCCCTACCAATGTCCTACTCCCTTTCTTCTTTCCTCCTTCATCTGTTTCTTTTCTTTTTTT--------------CTC---TCTCTCTCTTTATA--------------------------TATATGTATCTTTGCAGTACGACAAGGAGCTCACAGATTCTATTTCATTGGTA--------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................CGATAAGGATGGCGCTATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200
......................GATAAGGATGGCGCTATTAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
.............TTCTCAGCCGATAAGGATGGCGCTATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
.............TTCTCAGCCGATAAGGATGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGAGCTCACAGATTCT................................1911.00110000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGACAAGGAGCTCACAGAT...................................2211.00100100
droVir3
GTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATC-GACTG----TTTCTCGTTTT-C----------------------------------------------------------------CTCTT-----------------------TC--TC-----------------------------------------------TC----TTTC-TT--TT-CCTATTTATCTTTCCAGTACGGCAAGGAGCTCACAGATTCTACTTTATGGGTACATAA-A-------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCCGTTTT-----------------------CC--TTTTCTC------------------------------------------TC----TTTC-TT--TT-TCTATATATCTTTACAGTGCGGCAAGGAGCTCACAGATTCTATTACATTGGTA--------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTACT-GAATG----TTTCTCGATAT-CCATTTT-----------------------------------------------------CTCTCTCTCT-----------------------CT--CTCTCTCT-------------CTC---TCTCTTTCTCTTTT--------TC----TTTT-TTTTTTCTATATATATCTTTACAGTACGGCAAGGAGCTCACAGATTCTATTTCATTGGTACATAA-ATATATACATATTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 01:17 PM