ID:

dsi_12837

 Coordinate:

3r:7907394-7907678 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.2 -16.3 -16.2 -16.2

Flybase annnotation

exon [3r_7907679_7907749_+]; CDS [3r_7907679_7907749_+]; CDS [3r_7907093_7907393_+]; exon [3r_7906959_7907393_+]; intron [3r_7907394_7907678_+]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCCGAACGGTCGCTTCAAGACCAATACCAGACTGTGTTTGAGTATATCAGGTATGTGTCAGTTCCATATCAGTAGGAGTCCGAATACACAGCTAGAAATAAAGCGGATTGGTTGTCACAGTTGTGGCACATTAAAGAAAGGCTAGTAACTACAGGCTTACAAAGCATTATACTTTGAACCCTGAATAGTTAGTTATGTTTAACGAAGCCGATGGACTTTCAAATATGTTTTTGGCGACCTTTCAAATAGATTTTACTGTAGCACATGCTAGCTGCAATCTGTGTAGATTCCATTGTTCTAAACATATAACTTATCCTCACTATCGTGGTTTTCAGATTTTCATCCGGACACTTGGAACCCGACTTGGTGCGTAGGCACCATTCTC
***********************************************************************************************************************************.............((..(((..(((((...((((((...(((.............))).....))))))....)))))..)))))************************************************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 M024
male body		 M053
female body
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
............................................................................................................................................................................................................................................................................................................................................CAGATTTTCATCCGGACACTTG............................... 22 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................GATTATACTGTAGAACATGTTA................................................................................................................... 22 3 1 2.00 2 0 2 0 0 0 0 0 0 0 0
...........GCTTCAAGACCAATACCAGACTGT.............................................................................................................................................................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TTAACGAAGCCGATGGAC......................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................TTTCATCCGGACACTTGGAAC........................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........GCTTCAAGACCAATACCAGACTGG.............................................................................................................................................................................................................................................................................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................ATTTTCATCCGGACACTTGGAACCC......................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................TAAAGAAAGGCTAGTAACTACAG....................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................................TTACTGTAGCACATGCTAGCT................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................GTTCTAAACATATAACTTATCC..................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................CGGACACTTGGAACCCGACTTGGTGCG.............. 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................................................................................................CTGCAATCTGTGTAGATCCCA............................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................TAGATTATACTGTAGAACATGTT.................................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................ATGGACTTTCAAATATGT............................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................CTCACTATCGTGGTTTTCAG.................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................CTTGGAACCCGACTTGGTG................ 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...........................CAGACTGTGTTTGAGTATATC................................................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................AGATTCCATTGTTCTAAACAT................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................................................TAGATTATACTGTAGAACATG...................................................................................................................... 21 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TATGTTTTTGACGACGATTCA............................................................................................................................................. 21 3 7 0.29 2 0 2 0 0 0 0 0 0 0 0
............................AGACTGTGTTTGAAT...................................................................................................................................................................................................................................................................................................................................................... 15 1 17 0.12 2 0 0 0 0 0 0 0 2 0 0
..........................................................................................................................................................................................................................................................TTTTACAGTAGACCATGCT.................................................................................................................... 19 3 20 0.10 2 0 0 0 0 0 0 0 2 0 0
....................................................................................................................................................................................CTGAATACTTAGGTATG............................................................................................................................................................................................ 17 2 15 0.07 1 0 0 0 0 0 0 0 0 1 0
..............................................................................................................................................................................................................GCCGATGGACTTGCA.................................................................................................................................................................... 15 1 18 0.06 1 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................................................................................................................................................................................................CGTAGGCACCATTCAA 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................AATGAAAGCAGATTGGTTGT.............................................................................................................................................................................................................................................................................. 20 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0
..................................................................AATCATTAGGAGTTCGAAT............................................................................................................................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................CAGACTTTGATCCGGA..................................... 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0
......CGGTCGCTGCAAAACC........................................................................................................................................................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................TCAGAGTTTCATCGGG...................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................................................................................................................CCCTTGTTCTAAAGAT................................................................................ 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0
.....................CAATACTAGACTGTATT........................................................................................................................................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1
....................................................................TCATTAGGAGTTCGAAT............................................................................................................................................................................................................................................................................................................ 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

CGGCTTGCCAGCGAAGTTCTGGTTATGGTCTGACACAAACTCATATAGTCCATACACAGTCAAGGTATAGTCATCCTCAGGCTTATGTGTCGATCTTTATTTCGCCTAACCAACAGTGTCAACACCGTGTAATTTCTTTCCGATCATTGATGTCCGAATGTTTCGTAATATGAAACTTGGGACTTATCAATCAATACAAATTGCTTCGGCTACCTGAAAGTTTATACAAAAACCGCTGGAAAGTTTATCTAAAATGACATCGTGTACGATCGACGTTAGACACATCTAAGGTAACAAGATTTGTATATTGAATAGGAGTGATAGCACCAAAAGTCTAAAAGTAGGCCTGTGAACCTTGGGCTGAACCACGCATCCGTGGTAAGAG
*************************************************************************************************************************************************************************.............((..(((..(((((...((((((...(((.............))).....))))))....)))))..)))))*********************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M024
male body		 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
.GGCTTGCCAGCGAAGTTCTG............................................................................................................................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................TCCGCAAGTTTCGTAATGTG..................................................................................................................................................................................................................... 20 3 3 0.33 1 0 1 0 0 0 0
...................................................................................................................................................................................................................................AAAAACAGCTGGAAAATTT........................................................................................................................................... 19 2 16 0.31 5 0 0 3 2 0 0
........ATGCGAAGTTCTGGTTGTGGT.................................................................................................................................................................................................................................................................................................................................................................... 21 3 4 0.25 1 1 0 0 0 0 0
...............................................................................................................................TGGCATTTCTTTCCGATCAG.............................................................................................................................................................................................................................................. 20 3 5 0.20 1 0 0 0 0 0 1
................................................................................................................................................................................................................................TAAAAAAACAGCTGGAAAATTT........................................................................................................................................... 22 3 6 0.17 1 0 0 0 1 0 0
.................................................................................................................................................................................CGGGACATAGCAATCAATA............................................................................................................................................................................................. 19 3 9 0.11 1 0 1 0 0 0 0
..................................................................................................................................................................................................................................CAAAAACAGCTGGAAAATTT........................................................................................................................................... 20 2 9 0.11 1 0 0 1 0 0 0
.............................................................................GAGTCTTATGTGTCGAACTT................................................................................................................................................................................................................................................................................................ 20 3 12 0.08 1 0 0 1 0 0 0
.............................................................................................................................................................................................................................TTAAACAAATACTGCTGGAA................................................................................................................................................ 20 3 16 0.06 1 0 0 0 0 1 0
..................................................................................................................................................................TCGTGAAATGGAACTTGGG............................................................................................................................................................................................................ 19 3 18 0.06 1 0 0 0 0 1 0
..................................................................................................................................................................................................................................................................................................GTAAGAAGATTTGTA................................................................................ 15 1 20 0.05 1 0 0 0 0 1 0
................................................................................................................................................CATCGAGGTCCGAATG................................................................................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:7907344-7907728 + dsi_12837 G-CCGAACGGTCGCTTCAAGACCAATACCAGACTGTGTTTGAGTATATCAGGTATGTGT----------CAGTTCCATATCAGTAGGAGTCCGAATA------------------------CACAGCTAGAAATAAAGCGGATTG---------------GTTGTCACAGTTGTGGCACATTAAAGAAAGGC-------------------------------------------------------T--------------AGTAACTACAGGCTTACAAAG---CATTATACTTTGAACCCTGAATAGT--TAGTTATGTTTAACGAAGCCGATGGACTT----------TCAAATATGTTTTTGGCGACCTTTCAAATAGATTTTACTGTA--------GCACATGCTAGCTGCAATCTGTGTAGATTCCATTGTTCT-------------------------------------------------------------------AAACATATAACTT--ATCCTCACTAT---CGTGGTTTTCAGATTTTCATCCGGACACTTGGAACCCGACTTGGTGCGTAGGCACCATTCTC
droSec2 scaffold_12:793792-794176 + G-CCGAACGGTCGTTTCAAGACCAACACCAGACTGTGTTTGAGTATATCAGGTATGTGT----------CAGTTCCATATCCGTAGGAGTATGAATA------------------------CACAGCTAGAAATAAAGCGGATTG---------------GTTGTCACAGTTGTGGCACATTAAAGAAAGGC-------------------------------------------------------T--------------AGTAACTACAGGCTTACAAAC---CACTATACTTTGAACCCTGAATAGT--TAGTTATGTTTAACGAAGCCGATGGACTT----------TCAAATATGTTTTTGGCGACCTTTCAAATAGATTTTACTGTA--------GCACATGCTAGCTGCAATCTGTGTAGATTCCATTGTTCT-------------------------------------------------------------------AAACATATAACTT--ATCCTCACTAT---CGTGGTTTTCAGATTTTCATCCGGACACTTGGAACCCGACTTGGTGCGTAGGCACCATTCTC
dm3 chr3R:13359003-13359394 - G-CCGAACGGTCGCTTCAAGACCAACACCAGACTGTGTTTGAGTATATCAGGTATGTGT----------CAGTTCCATATCCGTAGGAGTCCGAATC------------------------CACAGCTAGAAATAAAGCGGATTG---------------GTTGTCACAGTAGTAGAACATTAAAGAATGGG-------------------------------------------------------T--------------AGTAACTACAGGCTTAAAGACTACCATTA-ACTTTGAACGCTGAATAGTTTTAGTTATGTTTGACGAAGCCGATGGACTTTGTGGCTTAGTCAAACATGTTTTTTGCGACCTTTCAAATAGATATTCGTGTATCTGTTTAG---------------ATCTGTTTAGATTCTATTGTTCC-------------------------------------------------------------------AAACATATAACTT--ATCAACCCTAT---TGGGATTTTCAGATTTTCATCCGGACACTTGGAACCCGACTTGGTGCGTAGGCACCATTCTC
droEre2 scaffold_4770:8265157-8265535 + G-CCGAACGGGCGCTTCAAGACCAACACCAGACTGTGCTTGAGCATATCAGGTGAGTGGGAAGCCCCGGCAGTTCCTTATCAATTGGGAATCGAATCCGTCTTAAGAAAACTGGAAGTAACCACAGCTAGAAATAAAGCAGAATG---------------GTTGTCACGGTTGTAGTGCATTACAAAAGGGA-------------------------------------------------------A-ATCTCACATTAAAAGCAACTTCAGGCTTAAAAAG-ACCATTATATT---------------------------------------------------------------------------------------------------------------------------------------------ATCCCAAATTGTCTATGTAACATAACATTATTAATGTGTATTGTAATACGAATATTTAAGACTTGCAAACGTAAACACCATACTT--ATTCTCACTAT---T-TGACTTTCAGATTTTCATCCGGACACTTGGAACCCCACTTGGTGCGTGGGCACCATTCTC
droYak3 3R:1916242-1916462 - G-CCGAACGGACGCTTCAAGACCAACACCAGACTGTGCTTGAGCATATCAGGTATGTGGAGAGTCTCGAATGTTCCATTTCAGTAGGAAACTGAATTCGTTTTAAGAAAACTAGAAATAACCACAGCTAGAAATAAAGCAGACTG---------------GT-------------------------AAGGG-------------------------------------------------------TAATCTCACTTTAAATGTAGCTACAG-------------------------------------T--TCGGTTTGTTCAACTAAGCCGATGCTTAG----------ACAAACAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTT
droEug1 scf7180000405174:6721-6799 - TAGCTAATGATCTTTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGCATTTTAGACTTTCATCCGGACACTTGGAATCCCACCTGGTGTGTTGGCACTATTCTC
droBia1 scf7180000302075:4590953-4591031 - G-CCCAACGGACGCTTCAAGACCAACACCAGGCTGTGCTTGAGCATATCAGGTATGCGG----------AGGGTCCA----AGTATGGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGA
droTak1 scf7180000414295:151690-151783 - G-CCGAACGGACGCTTCAAGACCAACACCAGGCTGTGCTTGAGCATATCAGGTATGAGG-----------------ATATTGCTAGGGGATTTAATA------------------------GAAATCAGCGAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
droEle1 scf7180000491080:2920077-2920134 + G-T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAGACTTTCATCCGGACACTTGGAACCCCACCTGGTGCGTGGGCACTATTCTT
droRho1 scf7180000779369:19947-20003 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATAGACTTTCATCCGGACACATGGAACCCCACTTGGTGCGTGGGCACTATTCTT
droFic1 scf7180000453912:2115138-2115197 + T-GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTCAGACTTTCATCCGGACACGTGGAATCCCACTTGGTGTGTTGGCACCATTCTC
droKik1 scf7180000302461:1170593-1170649 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGACTTTCATCCAGACACTTGGAACCCGACTTGGTGTGTGGGGACCATACTC
droAna3 scaffold_13340:17794311-17794366 + T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAGACTTTCATCCGGACACGTGGAACCCTACTTGGTGTGTGGGAACCATTCTT
droBip1 scf7180000396721:132631-132711 - T-TCTAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATATATCTTGTATCCT--------------CTTACAGACTTTCATCCGGACACGTGGAATCCGACTTGGTGCGTAGGCACTATTCTT
dp5 2:9065424-9065476 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGACTTTCATCCGGACACCTGGAACCCCACTTGGTGTGTGGGCACCATTCTG
droPer2 scaffold_0:2878365-2878417 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGACTTTCATCCGGACACCTGGAACCCCACTTGGTGTGTGGGCACCATTCTG
droWil2 scf2_1100000004943:7171817-7171879 + T-CCAAATGGACGTTTCAAGACAAACACCAGGTTGTGTTTAAGCATTTCAGGTAATTGT----------CG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT
droVir3 scaffold_13047:14456177-14456243 - G-CCGAATGGACGCTTCAAAACAAACACCAGACTGTGTTTAAGCATTTCAGGTAATTTT----------TAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAT
droMoj3 scaffold_6540:17890230-17890303 - T-A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCAACTGT---TTCGTCTCTTAGACTTTCATCCAGACACATGGAATCCAACTTGGTGCGTGGGTACCATACTG
droGri2 scaffold_14830:5513597-5513890 + G-CCGAATGGACGCTTCAAAACAAATACCAGACTGTGTTTAAGCATTTCAGGTAGCCCC----------CAA------------------------A------------------------CTAAACTAATA-------AGAATGATCGTTCTCAATGCATTTGTCACGATTTAAATGCATTGAAAATATAGTTTTTTAAAATCATCTCCACTAGTTCTGATTTGAATCGGAATATTTGCACAATTCCAATTGGACCTTAGCTCTCTTTCCAT-------------------------------------T--TCCATTT--------------------------------------------------------------------------------------------------------------------GTTAT-------------------------------------------------------------------A-----------------CTCATTGTATTTATATACTGCAGATTTTCATCCAGACACATGGAATCCGACTTGGTGCGTGGGCACGATACTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
G-CCGAACGGTCGCTTCAAGACCAATACCAGACTGTGTTTGAGTATATCAGGTATGTGT----------CAGTTCCATATCAGTAGGAGTCCGAATA------------------------CACAGCTAGAAATAAAGCGGATTG---------------GTTGTCACAGTTGTGGCACATTAAAGAAAGGC-------------------------------------------------------T--------------AGTAACTACAGGCTTACAAAG---CATTATACTTTGAACCCTGAATAGT--TAGTTATGTTTAACGAAGCCGATGGACTT----------TCAAATATGTTTTTGGCGACCTTTCAAATAGATTTTACTGTA--------GCACATGCTAGCTGCAATCTGTGTAGATTCCATTGTTCT-------------------------------------------------------------------AAACATATAACTT--ATCCTCACTAT---CGTGGTTTTCAGATTTTCATCCGGACACTTGGAACCCGACTTGGTGCGTAGGCACCATTCTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATTTTCATCCGGACACTTG...............................2212.00200000000000002000
............GCTTCAAGACCAATACCAGACTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................TTAACGAAGCCGATGGAC...................................................................................................................................................................................................................................................................1811.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCATCCGGACACTTGGAAC...........................2111.00100100000000000000
............GCTTCAAGACCAATACCAGACTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCATCCGGACACTTGGAACCC.........................2511.00100100000000000000
.....................................................................................................................................................................................TAAAGAAAGGC-------------------------------------------------------T--------------AGTAACTACAG......................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTACTGTA--------GCACATGCTAGCT........................................................................................................................................................................................2111.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCT-------------------------------------------------------------------AAACATATAACTT--ATCC........................................................................2211.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGACACTTGGAACCCGACTTGGTGCG..............2711.00100000001000000000
..............................................................................................................................................................................................................................................................................................................................................ATGGACTT----------TCAAATATGT.............................................................................................................................................................................................................................................1811.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCACTAT---CGTGGTTTTCAG..................................................2011.00100000000100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGAACCCGACTTGGTG................1911.00100010000000000000
............................CAGACTGTGTTTGAGTATATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTCCATTGTTCT-------------------------------------------------------------------AAACAT.....................................................................................2111.00100001000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTAGGCACCATTCAA16200.05100000000100000000
droSec2
G-CCGAACGGTCGTTTCAAGACCAACACCAGACTGTGTTTGAGTATATCAGGTATGTGT----------CAGTTCCATATCCGTAGGAGTATGAATA------------------------CACAGCTAGAAATAAAGCGGATTG---------------GTTGTCACAGTTGTGGCACATTAAAGAAAGGC-------------------------------------------------------T--------------AGTAACTACAGGCTTACAAAC---CACTATACTTTGAACCCTGAATAGT--TAGTTATGTTTAACGAAGCCGATGGACTT----------TCAAATATGTTTTTGGCGACCTTTCAAATAGATTTTACTGTA--------GCACATGCTAGCTGCAATCTGTGTAGATTCCATTGTTCT-------------------------------------------------------------------AAACATATAACTT--ATCCTCACTAT---CGTGGTTTTCAGATTTTCATCCGGACACTTGGAACCCGACTTGGTGCGTAGGCACCATTCTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
G-CCGAACGGTCGCTTCAAGACCAACACCAGACTGTGTTTGAGTATATCAGGTATGTGT----------CAGTTCCATATCCGTAGGAGTCCGAATC------------------------CACAGCTAGAAATAAAGCGGATTG---------------GTTGTCACAGTAGTAGAACATTAAAGAATGGG-------------------------------------------------------T--------------AGTAACTACAGGCTTAAAGACTACCATTA-ACTTTGAACGCTGAATAGTTTTAGTTATGTTTGACGAAGCCGATGGACTTTGTGGCTTAGTCAAACATGTTTTTTGCGACCTTTCAAATAGATATTCGTGTATCTGTTTAG---------------ATCTGTTTAGATTCTATTGTTCC-------------------------------------------------------------------AAACATATAACTT--ATCAACCCTAT---TGGGATTTTCAGATTTTCATCCGGACACTTGGAACCCGACTTGGTGCGTAGGCACCATTCTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCGGACACTTGGAACCCG........................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTTTCATCCGGACACTTGGAA............................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ACCAGACTGTGTTTGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCCGACTTGGTGCGTAGG..........2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................ATTAAAGAATGGG-------------------------------------------------------T--------------AGTAACT..........................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AAGACCAACACCAGACTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCCGACTTGGTGCGTAGGCAC.......2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................GTTATGTTTGACGAAGCCGATG......................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................TAAAGACTACCATTA-ACTTTGAACGCT.......................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAACCCGACTTGGTGCGTAGGC.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........CGCTTCAAGACCAACACCAGACTGTGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCATCCGGACACTTGGAAC...........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACTTGGAACCCGACTTGGT.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGAACCCGACTTGGTGCGT.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TTTGTGGCTTAGTCAAACATGTT............................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................................................................................................................................................................................................................................AAGCCGATGGACTTTGTGGCTTAGTC.....................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GACCAACACCAGACTGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGAACGGTCGCTTCAAGACCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACCCGACTTGGTGCGTAGGCAC.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGAACCCGACTTGGT.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCCGACTTGGTGCGTAGGC.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGATTCTATTGTTCC-------------------------------------------------------------------A..........................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGACACTTGGAACCCGACTTGG..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CCAACACCAGACTGTGTTTGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATATAACTT--ATCAACCCTAT---TG............................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................ATGTTTGACGAAGCCGAT.......................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTGGAACCCGACTTGGTGCGTA............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGATTTTCATCCGGACACTT................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................ACCATTA-ACTTTGAACGCTGAATAG.................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCCGACTTGGTGCGTAGGCACCATTC..2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CGCTTCAAGACCAACACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACACTTGGAACCCGACTTGGT.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droEre2
G-CCGAACGGGCGCTTCAAGACCAACACCAGACTGTGCTTGAGCATATCAGGTGAGTGGGAAGCCCCGGCAGTTCCTTATCAATTGGGAATCGAATCCGTCTTAAGAAAACTGGAAGTAACCACAGCTAGAAATAAAGCAGAATG---------------GTTGTCACGGTTGTAGTGCATTACAAAAGGGA-------------------------------------------------------A-ATCTCACATTAAAAGCAACTTCAGGCTTAAAAAG-ACCATTATATT---------------------------------------------------------------------------------------------------------------------------------------------ATCCCAAATTGTCTATGTAACATAACATTATTAATGTGTATTGTAATACGAATATTTAAGACTTGCAAACGTAAACACCATACTT--ATTCTCACTAT---T-TGACTTTCAGATTTTCATCCGGACACTTGGAACCCCACTTGGTGCGTGGGCACCATTCTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTTCATCCGGACACTTGGA.............................2211.0010001000
...................GACCAACACCAGACTGTGCTTGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGACACTTGGAACCCCACTTGG..................2511.0011000000
..............TTCAAGACCAACACCAGACTGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
........................ACACCAGACTGTGCTTGAGCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
droYak3
G-CCGAACGGACGCTTCAAGACCAACACCAGACTGTGCTTGAGCATATCAGGTATGTGGAGAGTCTCGAATGTTCCATTTCAGTAGGAAACTGAATTCGTTTTAAGAAAACTAGAAATAACCACAGCTAGAAATAAAGCAGACTG---------------GT-------------------------AAGGG-------------------------------------------------------TAATCTCACTTTAAATGTAGCTACAG-------------------------------------T--TCGGTTTGTTCAACTAAGCCGATGCTTAG----------ACAAACAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................CAACACCAGACTGTGCTTGAGCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
droEug1
TAGCTAATGATCTTTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGCATTTTAGACTTTCATCCGGACACTTGGAATCCCACCTGGTGTGTTGGCACTATTCTCSizeHit CountTotal NormTotal
No Reads
droBia1
G-CCCAACGGACGCTTCAAGACCAACACCAGGCTGTGCTTGAGCATATCAGGTATGCGG----------AGGGTCCA----AGTATGGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGASizeHit CountTotal NormTotal
No Reads
droTak1
G-CCGAACGGACGCTTCAAGACCAACACCAGGCTGTGCTTGAGCATATCAGGTATGAGG-----------------ATATTGCTAGGGGATTTAATA------------------------GAAATCAGCGAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droEle1
G-T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAGACTTTCATCCGGACACTTGGAACCCCACCTGGTGCGTGGGCACTATTCTTSizeHit CountTotal NormTotal
No Reads
droRho1
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATAGACTTTCATCCGGACACATGGAACCCCACTTGGTGCGTGGGCACTATTCTTSizeHit CountTotal NormTotal
No Reads
droFic1
T-GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTCAGACTTTCATCCGGACACGTGGAATCCCACTTGGTGTGTTGGCACCATTCTCSizeHit CountTotal NormTotal
No Reads
droKik1
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGACTTTCATCCAGACACTTGGAACCCGACTTGGTGTGTGGGGACCATACTCSizeHit CountTotal NormTotal
No Reads
droAna3
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAGACTTTCATCCGGACACGTGGAACCCTACTTGGTGTGTGGGAACCATTCTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGTGTGTGGGAACC......1811.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCGGACACGTGGAACC..........................1911.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTGGAACCCTACTTGGT.................2011.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGACTTTCATCCGGACACGTG...............................2211.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTTGGTGTGTGGGAACCATTCT.2511.001000010
droBip1
T-TCTAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATATATCTTGTATCCT--------------CTTACAGACTTTCATCCGGACACGTGGAATCCGACTTGGTGCGTAGGCACTATTCTTSizeHit CountTotal NormTotal
No Reads
dp5
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGACTTTCATCCGGACACCTGGAACCCCACTTGGTGTGTGGGCACCATTCTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCATCCGGACACCTG...............................1811.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTCATCCGGACACCT................................1811.0010100000000
droPer2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGACTTTCATCCGGACACCTGGAACCCCACTTGGTGTGTGGGCACCATTCTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTTTCATCCGGACACCT................................2012.002200000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTTCATCCGGACACCT................................1912.002110000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGACACCTGGAACCCCACTTG...................2211.001010000
droWil2
T-CCAAATGGACGTTTCAAGACAAACACCAGGTTGTGTTTAAGCATTTCAGGTAATTGT----------CG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................CACCAGGTTGTGTTTAAGCATTTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
...................GACAAACACCAGGTTGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.........................CACCAGGTTGTGTTTAAGCATTTCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
..............TTCAAGACAAACACCAGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
................CAAGACAAACACCAGGTTGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
droVir3
G-CCGAATGGACGCTTCAAAACAAACACCAGACTGTGTTTAAGCATTTCAGGTAATTTT----------TAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................CAAAACAAACACCAGACTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000001000000000000000000000000000000000000000000000000000
................CAAAACAAACACCAGACTGTGTTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.......................AACACCAGACTGTGTTTAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........................ACCAGACTGTGTTTAAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
........................ACACCAGACTGTGTTTAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
T-A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCAACTGT---TTCGTCTCTTAGACTTTCATCCAGACACATGGAATCCAACTTGGTGCGTGGGTACCATACTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGT---TTCGTCTCTTAG..................................................1811.001000010
droGri2
G-CCGAATGGACGCTTCAAAACAAATACCAGACTGTGTTTAAGCATTTCAGGTAGCCCC----------CAA------------------------A------------------------CTAAACTAATA-------AGAATGATCGTTCTCAATGCATTTGTCACGATTTAAATGCATTGAAAATATAGTTTTTTAAAATCATCTCCACTAGTTCTGATTTGAATCGGAATATTTGCACAATTCCAATTGGACCTTAGCTCTCTTTCCAT-------------------------------------T--TCCATTT--------------------------------------------------------------------------------------------------------------------GTTAT-------------------------------------------------------------------A-----------------CTCATTGTATTTATATACTGCAGATTTTCATCCAGACACATGGAATCCGACTTGGTGCGTGGGCACGATACTCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................AATACCAGACTGTGTTTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110

Generated: 05/18/2015 at 02:13 PM