ID:dsi_1282 |
Coordinate:2r:5164760-5164816 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [2r_5164299_5164759_+]; CDS [2r_5164299_5164759_+]; CDS [2r_5164817_5165269_+]; exon [2r_5164817_5165269_+]; intron [2r_5164760_5164816_+]
No Repeatable elements found
| ##################################################---------------------------------------------------------################################################## AGCAACCGGATCTAAACTATCGGAATCCAAAGGTCCGGGAGACCATGAGTGTGAGTAAACGCCGCAAGGGATGAAGTTTGTGTAATGTTAATATTTTTTAATCGCAGAACGTGTTGAGATTTTGGCTAAGCAAGGGCGTATCCGGCTTTCGCATTGA **************************************************((((((.((((.((((((........))))))...)))).)).........))))..************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM343915 embryo |
M024 male body |
M025 embryo |
SRR553485 Chicharo_3 day-old ovaries |
SRR902008 ovaries |
SRR553486 Makindu_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................GGGCTGAAGCTTGTGTAGTGTT.................................................................... | 22 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................GGGCTGAAGTTTGTGTAGTCTT.................................................................... | 22 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................GGGGTGAAGTTTGTGTAGTCTT.................................................................... | 22 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................................................AAGCAAGGTCGTTTCCGGC........... | 19 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| AGCAACCGGATCTAAACTATCGGAA.................................................................................................................................... | 25 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................................................................TGTTGAGATTTTGGCTAAGCAAGGGC.................... | 26 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................................................................TGAGATTTTGGCTAAGCAAGGGCGTA................. | 26 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...................................................................GGGGTGAAGTTTATGTAGTGTT.................................................................... | 22 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................GGAGTGAAGTTTGTGTAGTGTT.................................................................... | 22 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................................................................AGCAAGGTCGTTTCCGGC........... | 18 | 2 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .............................................................CCGCAAGGGATCAGGT................................................................................ | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ....................................................................GGATGAAGGTTGGGTA......................................................................... | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
|
TCGTTGGCCTAGATTTGATAGCCTTAGGTTTCCAGGCCCTCTGGTACTCACACTCATTTGCGGCGTTCCCTACTTCAAACACATTACAATTATAAAAAATTAGCGTCTTGCACAACTCTAAAACCGATTCGTTCCCGCATAGGCCGAAAGCGTAACT
**************************************************((((((.((((.((((((........))))))...)))).)).........))))..************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553485 Chicharo_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
M023 head |
|---|---|---|---|---|---|---|---|---|---|
| .........................................................TTGCGGCGTTCCCTACTTCAAACACAT......................................................................... | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .............................................................................................................................................GGCCGAAAGCGGAACT | 16 | 1 | 5 | 0.20 | 1 | 0 | 0 | 1 | 0 |
| ....................................................................................................................................TCCCGCATAGGCCATAATC...... | 19 | 3 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 |
| ..GTAGTCCTAGATTTGATAA........................................................................................................................................ | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 |
Generated: 04/23/2015 at 11:00 AM