ID:

dsi_12784

 Coordinate:

2l:15887543-15887692 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [2l_15887693_15887903_-]; exon [2l_15887693_15887903_-]; intron [2l_15879772_15887692_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCTGAGCTACGCCCGTCTGCCCGCCGATCTGGAGATTCGTAACTACGATGGTAAGTAAAGTGCTAGTTACATGTATAATAATTAGTTAATATTACTGATTCCACAAGTTTGTATAGATAGCAATATATTATTGCTTGGGAATGGAAATCACGAGTTATTTGTCTCGCAAACTTGTACGAATTTTTCCGTTCTAGTAAAGTGAATATTTTTGGCCCAGCATTTTCATTTTCGGGCATTTATCATTAAGAAT
**************************************************...((((...(((((..((((........(((((((.......))))))).........))))....)))))...)))).(((((..(((((((((((((((((((...(((...))))))))))..))...)))))))))))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M023
head
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M053
female body
....................................................................................................................................................................................................................CCCAGCATTTTCATTTTCGGGC................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TTTCGGGCATTTATCATTAAA... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................TGCCCGCCGATCTGGAGATTCG................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
........................................AACTACGATGGTAAGTAAAGTGCTA......................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
GCTGAGCTACGCCCGTCTGCC..................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................GATCTGGAGATTCGTAACT.............................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CCAGCATTTTCATTTTCGGGC................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................CGATCTGGAGATTCGCAACTACGAT......................................................................................................................................................................................................... 25 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..................GCCCGCCGATCTGGAGATTC.................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CAGCATTTTCATTTATGGGC................ 20 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0
.CTGGGCTACGCCTGTCTGA...................................................................................................................................................................................................................................... 19 3 8 0.25 2 0 0 0 0 0 0 0 2 0 0
..........................................................................ATAATAATTAGTTAGTA............................................................................................................................................................... 17 1 14 0.07 1 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................TTGCTTGGGAATGCA......................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................................................................CGGGCATTTATTATTGA.... 17 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................TTCATGCTTGGGATTGGAA........................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CGACTCGATGCGGGCAGACGGGCGGCTAGACCTCTAAGCATTGATGCTACCATTCATTTCACGATCAATGTACATATTATTAATCAATTATAATGACTAAGGTGTTCAAACATATCTATCGTTATATAATAACGAACCCTTACCTTTAGTGCTCAATAAACAGAGCGTTTGAACATGCTTAAAAAGGCAAGATCATTTCACTTATAAAAACCGGGTCGTAAAAGTAAAAGCCCGTAAATAGTAATTCTTA
**************************************************...((((...(((((..((((........(((((((.......))))))).........))))....)))))...)))).(((((..(((((((((((((((((((...(((...))))))))))..))...)))))))))))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902009
testis
.GACTCGATGCGGGCG.......................................................................................................................................................................................................................................... 15 1 6 6.00 36 30 5 0 1 0 0
............................................................................................................................................TACCTTTAGAGCTGAATAAA.......................................................................................... 20 2 1 1.00 1 0 0 1 0 0 0
CGACTCGATGTGGGGA.......................................................................................................................................................................................................................................... 16 2 20 0.80 16 15 1 0 0 0 0
CGACTCGATGTGGGC........................................................................................................................................................................................................................................... 15 1 4 0.50 2 2 0 0 0 0 0
TGACTCGATGCGGGC........................................................................................................................................................................................................................................... 15 1 2 0.50 1 1 0 0 0 0 0
CGACTCGATGCGGCC........................................................................................................................................................................................................................................... 15 1 7 0.43 3 0 1 0 2 0 0
....................................AGCCTTGATGCTGCCAT..................................................................................................................................................................................................... 17 2 6 0.33 2 0 2 0 0 0 0
GGACTCGATGCGGGC........................................................................................................................................................................................................................................... 15 1 6 0.33 2 2 0 0 0 0 0
CGACTCGATGCAGGC........................................................................................................................................................................................................................................... 15 1 9 0.22 2 1 1 0 0 0 0
...................................CAGCCTTGATGCTGCCAT..................................................................................................................................................................................................... 18 3 15 0.20 3 0 3 0 0 0 0
....................................AGCCTTGATGCTGCCA...................................................................................................................................................................................................... 16 2 17 0.18 3 0 3 0 0 0 0
.................................................................................................TAAGGTGTTCAAATATATA...................................................................................................................................... 19 2 11 0.09 1 0 0 0 0 1 0
CGACTCGATATGGGCA.......................................................................................................................................................................................................................................... 16 2 16 0.06 1 1 0 0 0 0 0
.....................................GCCTTGATGCTGCCAT..................................................................................................................................................................................................... 16 2 17 0.06 1 0 1 0 0 0 0
CAACTCGATGCGAGCA.......................................................................................................................................................................................................................................... 16 2 18 0.06 1 1 0 0 0 0 0
...........................................................................................ATAGGCTAAGGTGTTCAAA............................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 1
....TCGATGCAGGCAGCCG...................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:15887493-15887742 - dsi_12784 GCTGAGCTACGCCCGTCTGCCCGCCGATCTGGAGATTCGTAACTACGATGGTAAGTAA----AGT-GCTAGTTACA---------TGTA-------------------------------------------------------------------------------------------------------------------TAAT---------------------------------------------------------------------AATTAGTTAATATTA-CTGATTCCACAAGTTTGTA------TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAGCAATATATTATTGCTTGGGAA-----------------------------------------------TGGAAAT---------CACGAGTTAT---------------------------TTGTC-TCGCAAACTTGTACGAATTTTTCCGTTCTA-------------------GTAAAG-------TGAATATTT------TTGG-C--CCAGCATTTTCATTTTCGGGCA----TTTATCATTAAGA-AT---
droSec2 scaffold_5:5046571-5046826 - CCTGAGCTACGCCCGTCTGCCCGCCGATCTGGAGATTCGCAACTACGATGGTAAGTAA----AGT-GCTAGTTACA---------TGTA------------------------------CATTT-------------------------------------------------------------------------------ATAAT---------------------------------------------------------------------AATTAGTTAATATTA-CTGATTCCACAAGTTTGTA------TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAGCAATATATTATTGCTTGGGAA-----------------------------------------------TGGAAAT---------CACGAGTTAT---------------------------TTGTC-TCGCAAACTTGTAGGAATTTTTTCGTTCTA-------------------GTAAAA-------TGAATATTT------TTGG-C--CCAGCATTTTCATTTTCGGGCA----TTTATCATTAAGA-AT---
dm3 chr2L:16322752-16323009 - CCTGAGCTACGCCTGCCTGCCCGCCGATCTGGAGATTCGCAACTACGATGGTAAGTAA----AGT-GCTAGTTACA---------TATA---------------------------CCGCACTCAAGC--------------------------------------------------------------------------AATAAT---------------------------------------------------------------------AATTAGTTAATATTA-CTGATTCCACAATTTCGTA------TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAGCAATATATTATTGCTTGGGTA-----------------------------------------------TGGAAAT---------CACGAGCTAT---------------------------TTGTC-TCGCAAACTTGTAGGAATTTTTCCGTTCTA-------------------GTAAAG-------TGAATATTT------TTGG-C--CCAG------CATTTTCAGGCA----TTTATCATTAAGA-AT---
droEre2 scaffold_4929:8017832-8018139 - CCTGAGCTACGCCTGTTTGCCCGCCGATCTGGAGATTCGCAACTACGATGGTAAGTAA----AGT-GCATTGCCTT---------TTA-------------------------------------------------------------------------------------------------------------AATCAATTTCTCAACTTCTTTACTGATTTACCCAAA-------CATTTGTTTTAA--------------TTTCTTTACTCAATTAGTTAATCCTA-TTGATTCCACAATTGTATATACTCGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATATAAAAATATTATTGCTGAGAAA-----------------------------------------------TGGAAAT---------CACGAGTTAT---------------------------TTGTC-TCTCAAGCTTGTAGGAATTTTTCCGTTCTA-------------------GTAAAG-------TGATTATTT------TTGG-C--CTAG------CATTTTCGGGCATACATATATCATTAAGA-AT---
droYak3 2L:19003061-19003362 + CCTGAGCTTCGCCCGCCTTCCCGCCGATTTGGAGATTCGCAACTACAATGGTAAGTAA----AGT-GCAAATTGCT---------TC------------------------------------------------------------------------------------------CACCTCAGTATTGCTTTTTAACTAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTC-A------------------CTACTTTACTCATACTTAATTATTAAATTAGTGGGTACATCTGATAAAAAAAAATATAAAATTTAAAATATATATAAAAATATTATTGCTGTGGAG-----------------------------------------------TGGAAAT---------CACGAGTTAT---------------------------TCGTT-TC-TGAAACTTTCGGAATTTTTCCGTTCTA-------------------GGAAAG-------TGATTATTT------TTGG-C--CCAG------CATTTACGGGCA----TTTATCATTAAAA-AT---
droEug1 scf7180000404992:108627-108856 + CCTGAGCTACGCTCGTCTACCCGCCGATCTGGAGATTCGCAACTATGATGGTAAGTAA----AGT-CATATATTA-------------------------------------------------------TAT--------------------------------------------GAC-----------------------------------------------------------------------------------------------------------------------------CTAAGTG------TATACCT------------------------------------------------------------TTTATT------------TTTATTACTTCGA------------------ATACTTTAC-CATAGTG---------------------------------------------------------------------------------------------------------------------------AAATTTT--CCGCAGACTACAC----TAC------ATAG---------------T----CT-TTCCAAAACTGTAGGAATTTTTTGGTTCTA-------------------GT-------------ATTATTT------TTGG-C--CCAG------CATTTTCTGGCA----TTTATCATGAAAA-TT---
droBia1 scf7180000302422:8195245-8195438 - CCTGAGCTACGCCCGACTCCCCGCCGACCTGGAGATTCGCAACTACGATGGTGAGTGC----AGT-CCAATGTGTA---------TCTA-------------------------------------------------------------------------------------------------------------A----------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGATTTGCCA-----------------------------------------------GGGAAAA---------TGGCAACTAA---------------------------ATGCG-TTCCAAAAACGTAGGAATTCGTGCGTTCTA-------------------GTAAAT-------TGTTTATTT------TCGG-C--TCAG------TATTTTCCGCCA----TTTATCATGAAAA-TG---
droTak1 scf7180000415912:45560-45782 + CCTGAGCTACGCCCGTCTGCCCGCCGATCTGGAGATTCGCAACTATGATGGTGAGTGA----AGT-TAA--------------------------------TAT--AGTTC------------TGTA---AAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACTTGGTA------TAGACAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTT----------------------------------------TTTGAGCAAGAGAAATGGTAGC---------CACAAGCTAT---------------------------ATGCGTTTCCAAAAATGTAGGAATTTTTTCGTTCTA-------------------GTAAAT-------TGATTATTT------TTGG-A--CCAG------CATTTTTCGCCA----TCTATCATGAATA-TTTT-
droEle1 scf7180000490579:1048395-1048735 + CCTGAGCTACGCCCGTCTGCCCGCCGACTTGGAGATTCGCAACTATGATGGTAAGTTA----TTA-TTTTATTGCC---------TTT--------------AAAT---TTATGTTAAATTTACATAAAATAAGATTTTACACATCTTATTATTTAA-AGTTGGTACGTATTACTAACAACTCATTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTACTATTAAAAAACC--GAC-TAAAGCT---------------------------------------------------------A--------AGTTACTTTTGGA-----------------------------------------------TG---AT---------CACAAATTATATCCACAAATTAATATATTTTGAGGAACTGTT--TCCAAAACTTAAGGAATTTTAGCGTTCTGAAAGCTAAATGTGTTTTTATTAAAT-------CGATTATTT------TTGG-C--CCAG------CATTTGAAGGCA----TTTATCATAAA---GT---
droRho1 scf7180000779449:137635-137929 + CCTCAGCTACGCCCGTCTGCCCGCCGATCTGGAGATTCGCAACTATGATGGTATGTTT----TTA-TCT-------ATATTGCTTTGTATATACATTTACAGGA--AATAC--A---------------------TTTTAGACATCTTAGTATTTTAATGT-------------TAAAAACCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCACTACTATTTTAAAAAC--GAG-TTAA-----------------------------------------------------------------------CTACTCTT-------------------TATTCAAATTAAATTTTT-------------------------------TGAGCTA--------------------------------C-TTGCAAAATTATCGGAATTTTTTCGTTCCAAAAGCTAAATGTGGTTTTACAAAAT-------GTATTATTT------TTGG-C--CTAG------CATTTGGAGGCA----TTTATCAAAAATAAAT---
droFic1 scf7180000454078:255241-255536 - CCTTAGCTACGCTCGTCTGCCCGCCGACCTGGAGATTCGAAACTATGATGGTAAGTTCTTAAAGA-CCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------AGTTTTGAAATCCTTATGAAATTTTAAAGT--------CTG----------TGTAAACTCTTTCAT------------CTTGTTATTTTATGCATTTTTTCTATATTAAAATC--AAG-TT-----------------------------------------------------------------------TCTATATTTGTTTTGGGGAATGTTAAGCGCATTTAAATTAAATTTTT-------------------------------------AA-------TAA---------------T----TT-TTCCAAAATTGTAGGAATTTTTCAGTTCTC-------------------A-AACT-------TGGTTATTTTTGGTTTTGG-C--CCAG------CGCACT-CGATA----TTTATCATGAAA--AT---
droKik1 scf7180000302382:89710-89959 - ACTGAGCTACGCCCATCTGCCTGCCGATTTGGAGATTCGCAACTATGATGGTGAGTAC----AGTTGCCAA-A--A---------TG------------------------------------------------------------------------------------------------------------------AATTACTAA-----T----TCATTTGCCCAAA-----AGTATTAGCCATAA--------------GTTCTAGACTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAGGCA-----------------------------------------------TTGAACT---------TTTCAGTTAA-------TAA---------------T----TC-TCCGAAATTTATTGGAATTTTT-AGTTAGCA--GCGTAAAATCTAGCCAGTAAAG-------TG-TTATTT------TTGGGCA-TCTG------AATTTGCGGGCA----TTTTTCATGAAAAATT---
droAna3 scaffold_12916:6614276-6614492 + dan_569 CCTGAGCTACGCCCGCCTACCCGCCGATCTGGAAATTCGCAACTATGATGGTGAGTTC----TAA-ACTCGAAATA---------TTA--------------AAAA---ATTTATTATACATCCATAAAAT--------------------------------------------------------------------------------------------------------ATTAATATCAGACATGTTTCCTAAGAAAAATGTTCTAAATAAA------GGTTCCTTTTTGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAAAAGGCAG-----------------AGAACGAAAAATATAGTCAGCAATT-------GGATTATTT------TTGG-C----------------------------------AACAAAA-TT---
droBip1 scf7180000396568:198925-199162 - CTTGAGCTACGCCCGCCTGCCCGCCGATTTGGAAATTCGCAATTATGATGGTGAGTAC----CAG-ACTGGAAATA---------TAA--------------AA--AATACATAATATGCATCCATAA--------------------------------------------------------------------------AAAAATAA-----T----ACATTAATCAAAAACAATAATATCACCCACAATTCCCTAGAAAAGTGTTCTAAATAAA------GGTTCCTT-CTGCTTCCATAAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG--------------------------------------------------------------------------------------------------------------------------------------------AGAACGGAATATATAGTCAGTAATT-------GAATTATTT------TTGG-CAACCA---------------------------------AAA-TT---
dp5 4_group2:599165-599303 + CCTCAGCTATGCCCGTCTACCCGCCGATCTGGAGATACGCAACTACGATGGTAAGTGC----CC---CT-------ATATTTCGATATATATGTATGTGCATAT--AGTAC--G---------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------------------GTAAAT-------GGTTTATTT------TGAG-GC----ACA---------------------TTTTCATGAAAA-TTTTC
droPer2 scaffold_8:3290230-3290368 - CCTCAGCTATGCCCGTCTACCCGCCGATCTGGAGATACGCAACTACGATGGTAAGTGC----CC---CT-------ATATTTCGATATATATGTATGTACATAT--AGTAC--G---------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------------------GTAAAT-------GGTTTATTT------TGAG-GC----ACA---------------------TTTTCATGAAAA-TTTTC
droWil2 scf2_1100000004516:3709850-3709909 - ATTAAGCTATGCCCGACTACCCGCCGATTTAGAGATACGCAACTATGATGGTGAGTAA----AG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12963:7867696-7867930 + CCTGAGCTATGCCCACCTGCCTGCCGATCTGGAGATACGCAACTATGATGGTAAGTAC----GAT-TTGTATTCTC-----TCTATGTATATAAATATATATAT--CATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTTTGCC------CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAAAGATACATTTATGGT--------------------------------------CTCTAGCAAGGGAT-TT--------------------TAAT---------------------------TTTTT-TTTCAAACGGCTTCGAACTCTTTTTT---------GAAAGGTCTA----TCAAAAATTGGTGTAAAAATAT------TCTA-T--GTAACTTTTCCATTTTC----------------------------
droMoj3 scaffold_6500:2986564-2986619 - TTTGAGCTATGCCCATCTACCTGCCGACCTGGAGATACGCAACTATGATGGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15252:10943203-10943468 + GCTGAGCTATGCTCATCTGCCTGCCGATCTGGAGATTCGCAACTATGATGGTGAGTAC----GCT-TCATTAACTA---------TTTA-------------------------------------------------------------------------------------------------------------A----------------A----------------A-------AAT----------------------------------------------------------------A-----------------TGTTTTTAAGTTCATATGTCAATTCATAATTATATATTCTGAAATTGTTTGAATAGATTGAT-TATCCTACCAGATCTTTTCCTACATCAA------------------ATACTTTGC-TCCA-----TTA------------TTATAACTCGTAAAA---------------------------------------------------------------------------------------------------------------------------------A---------------T----TT-ATGTAGAATTTAA------------------------------------GAAAAT----------TCATTT------TTGG-AA-TCTA------TATCT--CTGTA----TATACTAT-AATA-AT---

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCTGAGCTACGCCCGTCTGCCCGCCGATCTGGAGATTCGTAACTACGATGGTAAGTAA----AGT-GCTAGTTACA---------TGTA-------------------------------------------------------------------------------------------------------------------TAAT---------------------------------------------------------------------AATTAGTTAATATTA-CTGATTCCACAAGTTTGTA------TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAGCAATATATTATTGCTTGGGAA-----------------------------------------------TGGAAAT---------CACGAGTTAT---------------------------TTGTC-TCGCAAACTTGTACGAATTTTTCCGTTCTA-------------------GTAAAG-------TGAATATTT------TTGG-C--CCAGCATTTTCATTTTCGGGCA----TTTATCATTAAGA-AT---SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--CCAGCATTTTCATTTTCGGGC........................2211.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGGGCA----TTTATCATTAAA.......2111.00100100000000000000
.................TGCCCGCCGATCTGGAGATTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
........................................AACTACGATGGTAAGTAA----AGT-GCTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000100000
GCTGAGCTACGCCCGTCTGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
.........................GATCTGGAGATTCGTAACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCATTTTCATTTTCGGGC........................2111.00110000000000000000
..................GCCCGCCGATCTGGAGATTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
droSec2
CCTGAGCTACGCCCGTCTGCCCGCCGATCTGGAGATTCGCAACTACGATGGTAAGTAA----AGT-GCTAGTTACA---------TGTA------------------------------CATTT-------------------------------------------------------------------------------ATAAT---------------------------------------------------------------------AATTAGTTAATATTA-CTGATTCCACAAGTTTGTA------TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAGCAATATATTATTGCTTGGGAA-----------------------------------------------TGGAAAT---------CACGAGTTAT---------------------------TTGTC-TCGCAAACTTGTAGGAATTTTTTCGTTCTA-------------------GTAAAA-------TGAATATTT------TTGG-C--CCAGCATTTTCATTTTCGGGCA----TTTATCATTAAGA-AT---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTATTGCTTGGGAA-----------------------------------------------TGG..........................................................................................................................................................................................2011.0010100
.....GCTACGCCCGTCTGCCCGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
dm3
CCTGAGCTACGCCTGCCTGCCCGCCGATCTGGAGATTCGCAACTACGATGGTAAGTAA----AGT-GCTAGTTACA---------TATA---------------------------CCGCACTCAAGC--------------------------------------------------------------------------AATAAT---------------------------------------------------------------------AATTAGTTAATATTA-CTGATTCCACAATTTCGTA------TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAGCAATATATTATTGCTTGGGTA-----------------------------------------------TGGAAAT---------CACGAGCTAT---------------------------TTGTC-TCGCAAACTTGTAGGAATTTTTCCGTTCTA-------------------GTAAAG-------TGAATATTT------TTGG-C--CCAG------CATTTTCAGGCA----TTTATCATTAAGA-AT---SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................GCCCGCCGATCTGGAGATTCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2217.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TCTGGAGATTCGCAACTACGATGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000
...........................TCTGGAGATTCGCAACTACGATGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CTGCCTGCCCGCCGATCTGGAGATTCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGCCTGCCCGCCGATCTGGAGATTCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000
............CTGCCTGCCCGCCGATCTGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGGGTA-----------------------------------------------TGGAAAT---------CACGAGC......................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TGAGCTACGCCTGCCTGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
.....................................CGCAACTACGATGGTAAGTAA----AG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
.............................TGGAGATTCGCAACTACGATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTATTGCTTGGGTA-----------------------------------------------TGGAAA.......................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.............TGCCTGCCCGCCGATCTGGAGATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CTGCCCGCCGATCTGGAGATTCGCAACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TGCCCGCCGATCTGGAGATTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CTGCCCGCCGATCTGGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
..............................GGAGATTCGCAACTACGATGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGCCTGCCCGCCGATCTGGAGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CCCGCCGATCTGGAGATTCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GCCGATCTGGAGATTCGCAACTACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....GCTACGCCTGCCTGCCCGCCGATCTGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATCTGGAGATTCGCAACTACGATGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ACGCCTGCCTGCCCGCCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TGCCCGCCGATCTGGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CTGCCCGCCGATCTGGAGATTCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CCCGCCGATCTGGAGATTCGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGCCTGCCCGCCGATCTGGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TGAGCTACGCCTGCCTGCCCGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGCCTGCCCGCCGATCTGGAGATTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTGCTTGGGTA-----------------------------------------------TGGA.........................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....GCTACGCCTGCCTGCCCGCCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CCGCCGATCTGGAGATTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................ATCTGGAGATTCGCAACTAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CTGCCCGCCGATCTGGAGATTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GCCGATCTGGAGATTCGCAACTAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TGCCCGCCGATCTGGAGATTCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TCTGGAGATTCGCAACTACGATGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG-C--CCAG------CATTTTCAGGC........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CTGCCCGCCGATCTGGAGATTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CGCCGATCTGGAGATTCGCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTCCGTTCTA-------------------GTAAAG-------TGAATATT............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GCCTGCCCGCCGATCTGGAGATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GATTCGCAACTACGATGGTAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGGAGATTCGCAACTACGATGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CCTGAGCTACGCCTGTTTGCCCGCCGATCTGGAGATTCGCAACTACGATGGTAAGTAA----AGT-GCATTGCCTT---------TTA-------------------------------------------------------------------------------------------------------------AATCAATTTCTCAACTTCTTTACTGATTTACCCAAA-------CATTTGTTTTAA--------------TTTCTTTACTCAATTAGTTAATCCTA-TTGATTCCACAATTGTATATACTCGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATATAAAAATATTATTGCTGAGAAA-----------------------------------------------TGGAAAT---------CACGAGTTAT---------------------------TTGTC-TCTCAAGCTTGTAGGAATTTTTCCGTTCTA-------------------GTAAAG-------TGATTATTT------TTGG-C--CTAG------CATTTTCGGGCATACATATATCATTAAGA-AT---SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........CGCCTGTTTGCCCGCCGATCTGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2417.0070000007
.........................................ACTACGATGGTAAGTAA----AGT-GCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
.....................CGCCGATCTGGAGATTCGCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
......................................................................TGCCTT---------TTA-------------------------------------------------------------------------------------------------------------AATCAATTTCTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
........ACGCCTGTTTGCCCGCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
..............GTTTGCCCGCCGATCTGGAGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
..............GTTTGCCCGCCGATCTGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
droYak3
CCTGAGCTTCGCCCGCCTTCCCGCCGATTTGGAGATTCGCAACTACAATGGTAAGTAA----AGT-GCAAATTGCT---------TC------------------------------------------------------------------------------------------CACCTCAGTATTGCTTTTTAACTAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTC-A------------------CTACTTTACTCATACTTAATTATTAAATTAGTGGGTACATCTGATAAAAAAAAATATAAAATTTAAAATATATATAAAAATATTATTGCTGTGGAG-----------------------------------------------TGGAAAT---------CACGAGTTAT---------------------------TCGTT-TC-TGAAACTTTCGGAATTTTTCCGTTCTA-------------------GGAAAG-------TGATTATTT------TTGG-C--CCAG------CATTTACGGGCA----TTTATCATTAAAA-AT---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAATATTATTGCTGTGGAG-----------------------------------------------TGGAA........................................................................................................................................................................................2711.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTGCTGTGGAG-----------------------------------------------TGGAA........................................................................................................................................................................................2011.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTATTGCTGTGGAG-----------------------------------------------TGGA.........................................................................................................................................................................................2111.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTGTGGAG-----------------------------------------------TGGAAAT---------CAC..........................................................................................................................................................................2111.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATTATTGCTGTGGAG-----------------------------------------------TGGAAAT---------.............................................................................................................................................................................2511.00100000010000
droEug1
CCTGAGCTACGCTCGTCTACCCGCCGATCTGGAGATTCGCAACTATGATGGTAAGTAA----AGT-CATATATTA-------------------------------------------------------TAT--------------------------------------------GAC-----------------------------------------------------------------------------------------------------------------------------CTAAGTG------TATACCT------------------------------------------------------------TTTATT------------TTTATTACTTCGA------------------ATACTTTAC-CATAGTG---------------------------------------------------------------------------------------------------------------------------AAATTTT--CCGCAGACTACAC----TAC------ATAG---------------T----CT-TTCCAAAACTGTAGGAATTTTTTGGTTCTA-------------------GT-------------ATTATTT------TTGG-C--CCAG------CATTTTCTGGCA----TTTATCATGAAAA-TT---SizeHit CountTotal NormTotal
No Reads
droBia1
CCTGAGCTACGCCCGACTCCCCGCCGACCTGGAGATTCGCAACTACGATGGTGAGTGC----AGT-CCAATGTGTA---------TCTA-------------------------------------------------------------------------------------------------------------A----------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGATTTGCCA-----------------------------------------------GGGAAAA---------TGGCAACTAA---------------------------ATGCG-TTCCAAAAACGTAGGAATTCGTGCGTTCTA-------------------GTAAAT-------TGTTTATTT------TCGG-C--TCAG------TATTTTCCGCCA----TTTATCATGAAAA-TG---SizeHit CountTotal NormTotal
No Reads
droTak1
CCTGAGCTACGCCCGTCTGCCCGCCGATCTGGAGATTCGCAACTATGATGGTGAGTGA----AGT-TAA--------------------------------TAT--AGTTC------------TGTA---AAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACTTGGTA------TAGACAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTT----------------------------------------TTTGAGCAAGAGAAATGGTAGC---------CACAAGCTAT---------------------------ATGCGTTTCCAAAAATGTAGGAATTTTTTCGTTCTA-------------------GTAAAT-------TGATTATTT------TTGG-A--CCAG------CATTTTTCGCCA----TCTATCATGAATA-TTTT-SizeHit CountTotal NormTotal
No Reads
droEle1
CCTGAGCTACGCCCGTCTGCCCGCCGACTTGGAGATTCGCAACTATGATGGTAAGTTA----TTA-TTTTATTGCC---------TTT--------------AAAT---TTATGTTAAATTTACATAAAATAAGATTTTACACATCTTATTATTTAA-AGTTGGTACGTATTACTAACAACTCATTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTACTATTAAAAAACC--GAC-TAAAGCT---------------------------------------------------------A--------AGTTACTTTTGGA-----------------------------------------------TG---AT---------CACAAATTATATCCACAAATTAATATATTTTGAGGAACTGTT--TCCAAAACTTAAGGAATTTTAGCGTTCTGAAAGCTAAATGTGTTTTTATTAAAT-------CGATTATTT------TTGG-C--CCAG------CATTTGAAGGCA----TTTATCATAAA---GT---SizeHit CountTotal NormTotal
No Reads
droRho1
CCTCAGCTACGCCCGTCTGCCCGCCGATCTGGAGATTCGCAACTATGATGGTATGTTT----TTA-TCT-------ATATTGCTTTGTATATACATTTACAGGA--AATAC--A---------------------TTTTAGACATCTTAGTATTTTAATGT-------------TAAAAACCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCACTACTATTTTAAAAAC--GAG-TTAA-----------------------------------------------------------------------CTACTCTT-------------------TATTCAAATTAAATTTTT-------------------------------TGAGCTA--------------------------------C-TTGCAAAATTATCGGAATTTTTTCGTTCCAAAAGCTAAATGTGGTTTTACAAAAT-------GTATTATTT------TTGG-C--CTAG------CATTTGGAGGCA----TTTATCAAAAATAAAT---SizeHit CountTotal NormTotal
No Reads
droFic1
CCTTAGCTACGCTCGTCTGCCCGCCGACCTGGAGATTCGAAACTATGATGGTAAGTTCTTAAAGA-CCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------AGTTTTGAAATCCTTATGAAATTTTAAAGT--------CTG----------TGTAAACTCTTTCAT------------CTTGTTATTTTATGCATTTTTTCTATATTAAAATC--AAG-TT-----------------------------------------------------------------------TCTATATTTGTTTTGGGGAATGTTAAGCGCATTTAAATTAAATTTTT-------------------------------------AA-------TAA---------------T----TT-TTCCAAAATTGTAGGAATTTTTCAGTTCTC-------------------A-AACT-------TGGTTATTTTTGGTTTTGG-C--CCAG------CGCACT-CGATA----TTTATCATGAAA--AT---SizeHit CountTotal NormTotal
No Reads
droKik1
ACTGAGCTACGCCCATCTGCCTGCCGATTTGGAGATTCGCAACTATGATGGTGAGTAC----AGTTGCCAA-A--A---------TG------------------------------------------------------------------------------------------------------------------AATTACTAA-----T----TCATTTGCCCAAA-----AGTATTAGCCATAA--------------GTTCTAGACTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAGGCA-----------------------------------------------TTGAACT---------TTTCAGTTAA-------TAA---------------T----TC-TCCGAAATTTATTGGAATTTTT-AGTTAGCA--GCGTAAAATCTAGCCAGTAAAG-------TG-TTATTT------TTGGGCA-TCTG------AATTTGCGGGCA----TTTTTCATGAAAAATT---SizeHit CountTotal NormTotal
No Reads
droAna3
CCTGAGCTACGCCCGCCTACCCGCCGATCTGGAAATTCGCAACTATGATGGTGAGTTC----TAA-ACTCGAAATA---------TTA--------------AAAA---ATTTATTATACATCCATAAAAT--------------------------------------------------------------------------------------------------------ATTAATATCAGACATGTTTCCTAAGAAAAATGTTCTAAATAAA------GGTTCCTTTTTGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAAAAGGCAG-----------------AGAACGAAAAATATAGTCAGCAATT-------GGATTATTT------TTGG-C----------------------------------AACAAAA-TT---SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................CGCAACTATGATGGTGAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
................CTACCCGCCGATCTGGAAATTCGCAACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.............CGCCTACCCGCCGATCTGGAAATTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
..............GCCTACCCGCCGATCTGGAAATTCGCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
...............CCTACCCGCCGATCTGGAAATTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
droBip1
CTTGAGCTACGCCCGCCTGCCCGCCGATTTGGAAATTCGCAATTATGATGGTGAGTAC----CAG-ACTGGAAATA---------TAA--------------AA--AATACATAATATGCATCCATAA--------------------------------------------------------------------------AAAAATAA-----T----ACATTAATCAAAAACAATAATATCACCCACAATTCCCTAGAAAAGTGTTCTAAATAAA------GGTTCCTT-CTGCTTCCATAAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG--------------------------------------------------------------------------------------------------------------------------------------------AGAACGGAATATATAGTCAGTAATT-------GAATTATTT------TTGG-CAACCA---------------------------------AAA-TT---SizeHit CountTotal NormTotal
No Reads
dp5
CCTCAGCTATGCCCGTCTACCCGCCGATCTGGAGATACGCAACTACGATGGTAAGTGC----CC---CT-------ATATTTCGATATATATGTATGTGCATAT--AGTAC--G---------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------------------GTAAAT-------GGTTTATTT------TGAG-GC----ACA---------------------TTTTCATGAAAA-TTTTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................CTACCCGCCGATCTGGAGATACGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000001000
..................ACCCGCCGATCTGGAGATACGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
............................CTGGAGATACGCAACTACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
................................AGATACGCAACTACGATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.........TGCCCGTCTACCCGCCGATCTGGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..........................ATCTGGAGATACGCAACTACGATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000001000
droPer2
CCTCAGCTATGCCCGTCTACCCGCCGATCTGGAGATACGCAACTACGATGGTAAGTGC----CC---CT-------ATATTTCGATATATATGTATGTACATAT--AGTAC--G---------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------------------GTAAAT-------GGTTTATTT------TGAG-GC----ACA---------------------TTTTCATGAAAA-TTTTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................CTACCCGCCGATCTGGAGATACGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
......................GCCGATCTGGAGATACGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
droWil2
ATTAAGCTATGCCCGACTACCCGCCGATTTAGAGATACGCAACTATGATGGTGAGTAA----AG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................CGCAACTATGATGGTGAGTAA----AG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2311.00100100
............................TTAGAGATACGCAACTATGATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
droVir3
CCTGAGCTATGCCCACCTGCCTGCCGATCTGGAGATACGCAACTATGATGGTAAGTAC----GAT-TTGTATTCTC-----TCTATGTATATAAATATATATAT--CATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTTTGCC------CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAAAGATACATTTATGGT--------------------------------------CTCTAGCAAGGGAT-TT--------------------TAAT---------------------------TTTTT-TTTCAAACGGCTTCGAACTCTTTTTT---------GAAAGGTCTA----TCAAAAATTGGTGTAAAAATAT------TCTA-T--GTAACTTTTCCATTTTC----------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGT--------------------------------------CTCTAGCAAGGGAT-.............................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
.........................GATCTGGAGATACGCAACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000001000000000000000000000000000000
.....................TGCCGATCTGGAGATACGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010000000000000000000000000000000000000000000000000000000000
..............ACCTGCCTGCCGATCTGGAGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
..............ACCTGCCTGCCGATCTGGAGATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000001000000000000000000000000000
droMoj3
TTTGAGCTATGCCCATCTACCTGCCGACCTGGAGATACGCAACTATGATGGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................TGCCGACCTGGAGATACGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
................CTACCTGCCGACCTGGAGATACGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
droGri2
GCTGAGCTATGCTCATCTGCCTGCCGATCTGGAGATTCGCAACTATGATGGTGAGTAC----GCT-TCATTAACTA---------TTTA-------------------------------------------------------------------------------------------------------------A----------------A----------------A-------AAT----------------------------------------------------------------A-----------------TGTTTTTAAGTTCATATGTCAATTCATAATTATATATTCTGAAATTGTTTGAATAGATTGAT-TATCCTACCAGATCTTTTCCTACATCAA------------------ATACTTTGC-TCCA-----TTA------------TTATAACTCGTAAAA---------------------------------------------------------------------------------------------------------------------------------A---------------T----TT-ATGTAGAATTTAA------------------------------------GAAAAT----------TCATTT------TTGG-AA-TCTA------TATCT--CTGTA----TATACTAT-AATA-AT---SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....AGCTATGCTCATCTGCCTGCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
..............ATCTGCCTGCCGATCTGGAGATTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110
........ATGCTCATCTGCCTGCCGATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
..............ATCTGCCTGCCGATCTGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110

Generated: 05/18/2015 at 11:32 PM