ID:

dsi_12770

 Coordinate:

3l:24050415-24050564 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.8 -22.8 -22.7

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron-
mature
  1. 2l:21844436-21844461 -
  2. dsi_453  2r:2240924-2240949 +
  3. 3l:22802904-22802929 +
  4. dsi_12770  3l:24050418-24050443 -
star

Sense Strand Reads

TGGACGGGTACCCCTGTCGTAACTTTGCCAGGAGAGACATTAGCCTCAAGGTATGTTCATGGAATTCTCTACAAAAGATTTTCTATCACCCCGCTTAGTTTCGACTTTTTAATACCCGTTACTCGTAAAAAGGTATACTCGGCTCGGTAGAGTGTAGCGTTTCCGACCATATAAAGTATATATATTCTTGATCCGGATCAAAAGCCGAGTCGATCTGACCGTGTCCGTCTGTCTCTCCGTTCGTATGAAC
**************************************************(((((.((..((((....(((((.......(((((((...(((...(((....(((((((..(((.........))))))))))..))))))...))))))))))))...)))))).)))))............................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR553488
RT_0-2 hours eggs
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 SRR902008
ovaries
 O001
Testis
..........................................................................................................................................................................................................................CCGTGTCCGTCTGTCTCTCCGT.......... 22 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0
.......................................TTAGCCTCAAGGTATGTTCATGGAAT......................................................................................................................................................................................... 26 0 2 1.00 2 0 2 0 0 0 0 0 0 0 0 0
....CGGGTACCCCTGTCGTAACTTTGCC............................................................................................................................................................................................................................. 25 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................ATTCTTGATCCGGATCAAAAGCCGAGT........................................ 27 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
....................AACTTTGCCAGGAGAGACGTTAGC.............................................................................................................................................................................................................. 24 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
.......GTACCCCTGTCGTAACTTTGCC............................................................................................................................................................................................................................. 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
..............TGTCGTAACTTTGCC............................................................................................................................................................................................................................. 15 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0
.....................ACTTTGCCAGGAGAGACATTAGCCTCA.......................................................................................................................................................................................................... 27 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GATCTGACCGTGTCCGTCTGT.................. 21 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0
......GGTACCCCTGTCGTAACTTTGCC............................................................................................................................................................................................................................. 23 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................................................CCGGATCAAAAGCCGAGTCGATCT.................................. 24 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
............................................................GGACTTCTGTACAAAAGAT........................................................................................................................................................................... 19 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................TAAAGTATATATATTCTTGATCCGGA..................................................... 26 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................................CGAGTCGATCTGTCCGTGTCCGTCTG................... 26 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................AAAAAGGTATATTCGGCC.......................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1
...............................................................................................................................................................................GTATATATATTCTTGATCCGGATC................................................... 24 0 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................................................................CTGGATCAAAAGCCGAGTCGATCTGA................................ 26 1 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................GTATATATATTCTTGATCCGGATCA.................................................. 25 0 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0
....................................................................................................................................................................................................GTCAAAAGCCGAGTCGATCTG................................. 21 1 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CGAGTCGATCTGCCCGTGTCCGT...................... 23 1 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCTGACCGTGACCGCCT.................... 17 2 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................TTTATACCCGTTTCTCGTAAAAA....................................................................................................................... 23 2 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................TTCTTGCTCCTGATCAAAA............................................... 19 2 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TCAATAGCCGAGTCGATCTGACCGT............................ 25 1 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................ATATATATTCTTGATCCGGT..................................................... 20 1 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TCAAAAGCCGAGTCGATCTGACCATT........................... 26 2 16 0.06 1 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................................AGCCGAGTCGATCTGACC.............................. 18 0 17 0.06 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................AGCGTTTCCGACCATATAAAGTATATA.................................................................... 27 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................TAGCCGAGTCGATCTGAACGTGGC......................... 24 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

ACCTGCCCATGGGGACAGCATTGAAACGGTCCTCTCTGTAATCGGAGTTCCATACAAGTACCTTAAGAGATGTTTTCTAAAAGATAGTGGGGCGAATCAAAGCTGAAAAATTATGGGCAATGAGCATTTTTCCATATGAGCCGAGCCATCTCACATCGCAAAGGCTGGTATATTTCATATATATAAGAACTAGGCCTAGTTTTCGGCTCAGCTAGACTGGCACAGGCAGACAGAGAGGCAAGCATACTTG
**************************************************(((((.((..((((....(((((.......(((((((...(((...(((....(((((((..(((.........))))))))))..))))))...))))))))))))...)))))).)))))............................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 M053
female body
 M024
male body		 M023
head
 M025
embryo
...........GGGACACCATTGAAA................................................................................................................................................................................................................................ 15 1 9 7.44 67 18 2 0 43 4 0 0 0 0 0 0
.................................................................................................................................................................AGGCTGGTATATTTCATATATATAAG............................................................... 26 0 20 5.55 111 0 2 0 0 41 64 4 0 0 0 0
.............................................................................................................................................................................TTCATATATATAAGAACTAGGCCTAGT.................................................. 27 0 4 4.50 18 3 3 0 4 8 0 0 0 0 0 0
................................................................................................................................................................AAGGCTGGTATATTTCATATATATA................................................................. 25 0 20 4.25 85 2 7 63 13 0 0 0 0 0 0 0
...............................................................................................................................................................AAAGGCTGGTATATTTCATATATATA................................................................. 26 0 20 3.30 66 3 0 42 0 0 21 0 0 0 0 0
.................................................................................................................................................................AGGCTGGTATATTTCATATATATA................................................................. 24 0 20 3.15 63 0 0 0 51 11 0 1 0 0 0 0
............................................................................................................................................................CGCAAAGGCTGGTATATTTCATATA..................................................................... 25 0 20 2.05 41 34 0 0 4 1 0 0 2 0 0 0
...........................................................................................................................................................TCGCAAAGGCTGGTATATTTCAT........................................................................ 23 0 20 2.00 40 10 21 3 0 6 0 0 0 0 0 0
........................................................................................................................................................................................................TTTCGGCTCAGATAGACTCACACAGGC....................... 27 3 2 2.00 4 2 2 0 0 0 0 0 0 0 0 0
................................................................................................................................................................AAGGCTGGTATATTTCATATATATAAG............................................................... 27 0 20 1.90 38 0 0 36 0 2 0 0 0 0 0 0
.................................................................................................................................................................AGGCTGGTATATTTCATATATATAGG............................................................... 26 1 20 1.60 32 0 0 32 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GGCACAGGCAGACAGAGAGGCAAGTAT..... 27 1 2 1.50 3 1 2 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................GGCTGGTATATTTCATATATATAAG............................................................... 25 0 20 1.45 29 0 0 11 2 3 13 0 0 0 0 0
..........................................................................................................................................................................................................TCGGCTCAGATAGACTCACACAGGC....................... 25 3 6 1.17 7 4 3 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGACTGGCACAGGCAGACAGAGAGGC........... 26 0 2 1.00 2 0 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGACTGGCACAGGCAGACAGAGAGGCAAGT....... 30 1 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................ATCGCAAAGGCTGGTATATTTCATATA..................................................................... 27 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCGCAAAGGCTGGTATATTTCATAT...................................................................... 25 0 20 0.90 18 9 0 4 4 0 0 1 0 0 0 0
...............................................................................................................................................................AAAGGCTGGTATATTTCATATATATAAG............................................................... 28 0 20 0.85 17 0 0 6 6 3 2 0 0 0 0 0
..............................................................................................................................................................................TCATATATATAAGAACTAGGCCTAGT.................................................. 26 0 4 0.75 3 2 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................AAAGGCTGGTATATTTCATATATAT.................................................................. 25 0 20 0.70 14 0 1 11 0 0 2 0 0 0 0 0
..........................................................................................................................................................................................................TCGGCTCAGATAGACTCACACAGGCAGAC................... 29 3 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................CAAAGGCTGGTATATTTCATATATATA................................................................. 27 0 20 0.60 12 0 2 6 0 0 4 0 0 0 0 0
......................................................................................................................................................TCACATCGCAAAGGCTGGTATATTTCAT........................................................................ 28 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GGCACAGGCAGACAGAGAGGCAA......... 23 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
................................................TCCATACAAGTACGTTAAGAGATGT................................................................................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCGCAAAGGCTGGTATATTTCATATAT.................................................................... 27 0 20 0.50 10 1 6 0 3 0 0 0 0 0 0 0
..........................................CGGAGTTCCATACAAGTACCTTAAGAGAT................................................................................................................................................................................... 29 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
..............ACAGCATTGAGACGGGCCTCTGT..................................................................................................................................................................................................................... 23 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGGCACAGGCAGACAGAGAGGCAAGT....... 26 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................TCTAAAAGATAGTGGGGCGAAT......................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CTGGCACAGGCAGACAGAGAGGCAAGTAT..... 29 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
................................................TCCATACAAGTACCTTAAGAGATGT................................................................................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TTCATATATATAAGAACTAGGCCT..................................................... 24 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGACTGGCACAGGCAGACAGAGAGGCA.......... 27 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TTTCGGCTCAGATAGACTCACACAGGCA...................... 28 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CGGCTCAGATAGACTCACACAGGCAGA.................... 27 3 5 0.40 2 0 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CGCAAAGGCTGGTATATTTCAT........................................................................ 22 0 20 0.40 8 2 2 0 3 1 0 0 0 0 0 0
.........................................................................................................................................................CATCACAAAGGCTGGTATATTTCAT........................................................................ 25 1 6 0.33 2 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................ATATTTCATATATATAAGAACCAGGCC...................................................... 27 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
..........................CGTTCCTCTCTGTGATCG.............................................................................................................................................................................................................. 18 2 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................................................GGCTCAGATAGACTCACACAGGCAGAC................... 27 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................ATCGCAAAGGATGGTATATTTCAT........................................................................ 24 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
...................AATGAAACCGTCATCTCTGTAAT................................................................................................................................................................................................................ 23 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TAGGCCTAGTTTTCGGCTCAGCTAG................................... 25 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................CAAAGGCTGGTATATTTCATATA..................................................................... 23 0 20 0.30 6 1 5 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................AGAACTAGGCCTAGTT................................................. 16 0 7 0.29 2 0 1 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................TCGGCTCAGATAGACTCACACA.......................... 22 3 8 0.25 2 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCGCAAAGGCTGGTTTATTTCATAT...................................................................... 25 1 20 0.25 5 0 5 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TCATATATATAAGAACTAGGCCTAGTT................................................. 27 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TTCGGCTCAGCTAGACCGGCACAGGCAGAC................... 30 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TCATATATATAAGAACTAGGCCT..................................................... 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CGCAAAGGCTGGTATATTTCATATATATA................................................................. 29 0 20 0.25 5 0 3 0 2 0 0 0 0 0 0 0
..........................................................................................................................................................ATCGCGAAGGCTGGTATATTTCAT........................................................................ 24 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TTCATATATATAAGAACTAGGCCTA.................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
..........GGGGACACCATTGAAA................................................................................................................................................................................................................................ 16 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................ACTCAGCTAGACTGGCACAGGCAGAC................... 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CGCAAAGGCTGGTATATTTCATAT...................................................................... 24 0 20 0.20 4 0 3 1 0 0 0 0 0 0 0 0
.........................................CCGGAGTTCCATGCAAG................................................................................................................................................................................................ 17 2 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................GCTGGTATATTTCATATATATAAG............................................................... 24 0 20 0.20 4 0 0 4 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CATATATATAAGAACTAGGCCTAGT.................................................. 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
...........................................GGAGTTCCATGCAAG................................................................................................................................................................................................ 15 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................GGCTCAGATAGACTCACACAGGCAGA.................... 26 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TCGGCTCAGATAGACTCACACAGGCAG..................... 27 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................GGCTCAGATAGACTCACACAGGCAG..................... 25 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................AGGCTGGTATATTTCATATATATAG................................................................ 25 1 20 0.20 4 0 0 3 0 1 0 0 0 0 0 0
............................................................................................................................................................CGCAAAGGCTGGTATATTTCATATAT.................................................................... 26 0 20 0.20 4 0 1 3 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CGGCTCAGATAGACTCACACAGGC....................... 24 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TATATATAAGAACTAGGCCTAGT.................................................. 23 0 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................ATATATATAAGAACTAGGCCTAGT.................................................. 24 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................GCTCAGATAGACTCACACAGGCAG..................... 24 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TCGGCTCAGATAGACTCACACAGGCA...................... 26 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................GGCTGGTATATTTCATATATATAGG............................................................... 25 1 20 0.15 3 0 0 3 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCGCAAAGGCTGGTTTATTTCATATAT.................................................................... 27 1 20 0.15 3 0 3 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................AGGCTGGTATATTTCATATATA................................................................... 22 0 20 0.15 3 0 3 0 0 0 0 0 0 0 0 0
................................................................................................................................................................CAGGCTGGTATATTTCATATATATA................................................................. 25 1 20 0.15 3 0 0 0 0 0 3 0 0 0 0 0
...........................................................................................................................................................................................AACTAGGCCTAGTTCTCGGCTCAGCT..................................... 26 1 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................GGCTCAGATAGACTCACACAGGC....................... 23 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TAGTTTTCGGCTCAGCTAG................................... 19 0 15 0.13 2 0 0 0 0 0 0 2 0 0 0 0
......................................................................................................................................................................................................TTTTTCGGCTCAGATAGACT................................ 20 2 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................ACAGAGATGCAAGCATG.... 17 2 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0
..........................CGGGCCTCTCTGGAAACGGA............................................................................................................................................................................................................ 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1
..........GGGGACACCATTGAAAAG.............................................................................................................................................................................................................................. 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................AATCGCAAAGGCAGGTATATTTCAT........................................................................ 25 2 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................TCGCAAAGGCTGGTATATTT........................................................................... 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................AAAGGCTGGTATATTTCATATATA................................................................... 24 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCGCAAAGGCTGGTATATATCATATAT.................................................................... 27 1 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0
...........................................................................................................................................................TCGCAAAGGCTGGTATATTTCATATATAT.................................................................. 29 0 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................GCAAAGGCTGGTATATTTCATAT...................................................................... 23 0 20 0.10 2 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................CATCTCAAAGGCTGGTACATTTCAT........................................................................ 25 2 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................CGCAAAGGCTGGTATATTTCATATATA................................................................... 27 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................GCAAAGGCTGGTATATTTCATATAT.................................................................... 25 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0
............................................................................................................................................................CGCAAAGGCTGGTTTATTTCATATATAG.................................................................. 28 2 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................AGGCTGGTATATTTCATATATAT.................................................................. 23 0 20 0.10 2 0 0 0 0 0 1 1 0 0 0 0
.............................................................................................................................................................................................................................ACAGTCAGACAGAGATG............ 17 2 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0
............................................................................................................................................................CGCAAAGGCTGGTATATTTC.......................................................................... 20 0 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0
.........................................................................................................................................................................................................TTTCGCTCAGCTAGACCGGCACAGGC....................... 26 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TTCGGCTCAGCTAGACCGTCAC........................... 22 2 11 0.09 1 0 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................AGTTTTCGGCTCAGCTAGACTGGTA............................ 25 1 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................AGTTTTCGGCTCAGCTAG................................... 18 0 16 0.06 1 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................CACTTCACAAAGGCTGGTATATTTCAT........................................................................ 27 2 16 0.06 1 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................ATCTCAAAGGCCGGTACATTTCAT........................................................................ 24 3 16 0.06 1 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................TCGGCTCAGCTAGCCTGG.............................. 18 1 17 0.06 1 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................AAAAAATTATGGGCAAT................................................................................................................................. 17 1 19 0.05 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................AAAGGCTGGTATATTTCATATA..................................................................... 22 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................GGGCAATGAGCATTT......................................................................................................................... 15 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................TCGCAAAGGCTGGTATATATCATAT...................................................................... 25 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................AAGGCTGGTATATTTCATATATATAA................................................................ 26 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................AAAGGCTGGTATATTTC.......................................................................... 17 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................CGCAAAGGCTGGTATATATCAT........................................................................ 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCGCAAAGGCTGGTATAT............................................................................. 18 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................AAGGCTGGTATATATCATATATATA................................................................. 25 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................TCGCAAAGGCTGGTATATTTCATATA..................................................................... 26 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................AATTAGGGGCAATGGGCA............................................................................................................................ 18 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................CAGGCTGGTATATTTCATATATA................................................................... 23 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................ATTTTTCGGCTCAGC...................................... 15 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................CACAGGCTGGTATATTTCATATATATA................................................................. 27 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................GGCTGGTATATTTCATATATATA................................................................. 23 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................TCGCAAAGGCTGGTATATTTCA......................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................AGGCTGGTATATTTCATATATATAAGA.............................................................. 27 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................AAGGCTGGTATATTTCAGATATATAAG............................................................... 27 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................CAGGCTGGTATATTTCATATATATAGG............................................................... 27 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................GCAAAGGCTGGTATATTTCATATATAT.................................................................. 27 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................GCAAAGGCTGGTATATTTCATATATATAAG............................................................... 30 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................CAGGCTGGTATATTTCATATATATAAG............................................................... 27 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................CGCAAAGGCTGGTACATTTCATATA..................................................................... 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................AGGCTGGTATATTTCATATA..................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................AGGCTGGTATATTTCAGATATATAAG............................................................... 26 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................ACGCAAAGGCTGGTATATTTCATATATAT.................................................................. 29 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:24050365-24050614 - dsi_12770 TGGACGGGTACCCCTGTCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----A----TTAGCC------TCAAGGTATG---TTCATGGAATTCT-------CTAC---AAAAG--------------------------------------------------------------A--------TTTTCTATCA-----------CCCCGCTTAGTTT-------------C----GACTTTTTAATACCCGTTACTCGT------------AAAAAGGTATACTCGGCTC-------------------------GGTAGAGTGTAGCGTTTCCGACCATATAAAGTATATATATTCTTGATCCGGATCAAAAGCCGAGTCGATCTGACCGTGTCCGTCTGTCTCTCCGTTC----------------GTATGAAC
droSec2 scaffold_59:116404-116653 + TGGACGGGTACCCCTGTCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----A----TTAGCC------TCAAGGTATG---TTCATGGAATTCC-------CTAC---AAAAG--------------------------------------------------------------A--------TTTTCTATCA-----------CCCCGCTTAGTTT-------------C----GTCTTTTTAATACCCGTTACTCGT------------AAAAAGGTATATTCGGCTC-------------------------TGTAGAGGGTAGCGTTTCCGACCATATAAAGTATATATATTCTTGATCCGGATCAATAGCCGAGTCGATCTGACCGTGTCCGTCTGTCTGGCGGTTC----------------GTATGAAC
dm3 chr2R:1215484-1215731 + TGGACGGGTACCCCTGTCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCACGGTATG---TTCATGGAATTCT-------CTAC---AAAAG--------------------------------------------------------------A--------TTTTCTATCA-----------CCCCAATA--------CCCCTATACCT----ATCATTTTAATACCCGTTACTCGTA------------AAAAG---------GCTCTTTGA-------GAATTATGTGAAAGGTAGAGGGAAGCGTTTCCGACCATATGAAGTATA-ATATTCTTGATCAGGATCAATAGCCGAGCC---------------GTCTGTCTGTCCGTCC----------------GTATGAAC
droEre2 scaffold_4784:21516299-21516539 - ATGA---CTACCGCTGTCGTGAAG-TTGAGT--AG---A-------------------------------------------------------------ACAA--AA------------------------AAGGGATA---TTC-------------------------------------GATTGAATTTTTAATAGA------------------------------------A--------T----TATCA-----------TTCT---GAAGCT-------------T-TATTC---GTTATGAAGCGTTACCCATAGA-------GTAAAAGCGTATACTAGATTTATTGA-------AAAGCATGTAACCGATAGAAGGAAGCGTTTTCGAGTGTATAAAGTATATGTATTCTTGATCAGGATCAATAGCC-AGTCGATCTGGCCATGTCCGTC------------C----------------GTATGAAC
droYak3 v2_chr3R_random_402:2899-3144 + CTT------------GTTACAAAT-TTGGTATCGG-----------------------------------------------------------------GGAA---A-----A--TAT--GTC------TTCAGGTATA---TT------------------AAAC---AAAAGACTGCTTTGG---------------------------------------------------------------------------------------C-------------------------TTAATTTTTATACCTGTTACTCGTAAA------AGTAAAAGGGTATACTAGATTCGTTGA-------AAAGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAAGTATATATATTTTTGATCAGGATCAATAGCCGAGTCGATCTGGCCATGTCCGTCTGTCCGTCTGCCTGTCCGT--------CCGTATGAAC
droEug1 scf7180000407410:1308-1562 - TGGACGTGT-------TCGTAGCT-TCGGCA--GA-----------------------------------------------------------------AGAAT-ACATAATATA--ATAGATTCTT--AT--------------------------------A-----ATAAA--------------------------------------------------------------A--------TCTTCTATTT-----------AT---CTTAATCT-------------TATTGTTTGTGATTATACCCGTTACTTGTAGA-------GTAAAATGTTATACTAGATTGGTTCA-------AAAGTATGTAACAGATAGAAAGAAGCGTTTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCAATAGCGATGTCTATTGAGCTATGTCCGTCTGTCCGTCCGTCC----------------GTCCGTCC
droBia1 scf7180000301899:14717-14982 - AGGCCGGGGTAGGCAGTCCTGATT-TTAATA--TG----------GAGGCTATCAACTTTA-------ATTTCTCTACGACCT-TTCGG--------------------------------------------------------------CTTCTCTAAAGTTAGC---AGAGT--------------------------------------------------------------A--------A---TTGCCA-----------CCGCAGTTA---C-------------T----GCACTTTTTATTCCCGCTTTTCATACA-------GTAAAACGGTATACTAGAA-----AG-------AAAGTATCTAACAGATAAAAGGAAGCATTTCCGACCCCATAAAATATATACATTCTTGATCAGGATCACTAGCCGAGGCGATCTAGCCATGTCCGTCCGTC--------C----------------GCATGAAC
droTak1 scf7180000416000:18039-18271 + TCAT----------------TACT-TTACGG--CA-AA--------------------------AAACCTTAAAAT-TAA-----------------------G----------------------------AAAAAATG---TTCTTGAAAATATA------AAACAATAAAAG--------------------------------------------------------------T--------ATTTTTGTC----------------------TA--------------T----AGACTAATTATACCCGTTACTCGTAGA-------GCAAAAGGGTATATTGTAT----------------------TAACAGGGAGAAGGAAGCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGGGTCACTAGCCGAGTCGATCTAGCCATGTCCGTCTGTCTGTC----T----------------TTATGATC
droEle1 scf7180000491271:242438-242661 + TAAT-------------------T-TTTTCA--G-------------------------------------------------------------------------------A----TTGGCC------TCA-----TA---TATACGAAAATATT------TAAAA--ATAAAAATGCTTTCG---TG--------------------------------------------------------TTTCAAATTC-----------CACCACTTCGTT---------------------TTCGTAGATAACCGAAAACCG----------------------------------TCA-------GAAGCTTGGAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTGTATATAGTTTTGATCAGCATCACTAGCAGAGTCGATCTATCCATGTCCGTCTGTCTGTCCGTCC----------------GTTTCTAC
droRho1 scf7180000776233:212-472 - GCGC---GTTTTTCTTTTGTGGTT-TCCCCA--TG-----------------------------------------------------------------AGGC--CT-----A----TT--CC------ACAGTGCATT---TTAATT-------------------------------------------------AGAAATGTTTAACATTTTTGCAAGACTTCTCTATAAACGA--------------------------------------------------------------TATTTTTATACCCGTTACTCGTAGA-------GTAAAAGGGTATATTGTATTCGTGCA-------AAAGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCTATAAAGTATATATATTCTTGATCAGGGTCACTAGCCGAGTCGATATAGCCATGTCCGTCTGTCCGT----CC----------------GTATGAAC
droFic1 scf7180000452813:3929-4163 - CGGA----TAACTCTATCATATAG-CTGCCATAGG-----------------------------------------------------------------AGAG---------A----T----C------GAAAAATATA-----TATAGAATTAG-------TGGA---AATAA--------------------------------------------------------------A--------TTG-A------------------------------------------T----AGCATCTTTATACCCTT-----GCAGA-------GCAAAAGGGTATTATAATTTCATTCA-------GAAGTTTGCAACGCAGTGAAGGAGACACCTCAGACCCCATAAAGTATATATATTCTTGTTCAGCATCACGAGCAGAGTCGGAATACGTCTGTCCGTCTGTC----TGTTT----------------CTATGTAA
droKik1 scf7180000300499:1851-2077 - TCATT------------CTCAAA---------------------------------------------CCTTGTTCACGTGACTTCTGATTTTCCTC---AAGG--GA-----G-------------------------------------------------------------------------------------------------------------------------------------------CCA-----------CTTCAGTT--------CTCTTCTATTT----GGCATTTTTATACCCTT-----GC---------------AGGGTATTATAATTTCAGTCA-------GAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCAACAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCC----------------GTCTGTCC
droAna3 scaffold_13082:1622360-1622592 + ATT----------------------TGGCCA--GTAG-AACCAGACAAGATATCGAC--------------------------------------------------------------------------------------TTTATGCCAAGCT-------TAAC---AAAAG--------------------------------------------------------------A--------TTTTATTTTA-----------TGCTA-----------------------TTTTCCTTTTTTATACCCTT-----GCA-------------GAGGGTATTATAATTTTGGTCA-------AAAGTGTGCAACGCAGTGAAGGAGAAATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTCGATATGAGCATGTCCGTCTGTCCGTCGGTCC----------------GTCTGTCC
droBip1 scf7180000395058:37193-37429 + CGTGTAGGTTCCCCTGTTGTACCCGTTGGCT--GA-----------------------------CGGC-------------------------CTTT---AAAA-GGG-----A----T-AGCT------ACAATATATTTTCCATTTGAATCTTT--------TT-------------------------------------------------------------------------------------------------------------------------------T----AAAATATTTATACCCTT-----GCA-------------GAGGGTATTATAATTTTGTCCA-------AAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCGTCTGTCCGTCTGTCT----------------GT------
dp5 4_group1:2848485-2848756 - TGTTCGAGCGCCGCTTGCGATAC----------GG-----------------------------------------------------------------AGAG--CC-----G----TTAGTT----ATTCGATCTATG---TCCATA----------------CC---TAATG--------------------------------------------------------------A--------TATTCTACCATTTATTTGTCTCT---CTCATTCG-------------T----ACCTTTTTTATACCCGATACTCAAAAT-----GCGTATTGGGGTATATTAGATTTGTGGTGAAAATGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCCGTCTGTCCGT----CC----------------CTATCAGC
droPer2 scaffold_11:2076450-2076714 + CGAACCGATAC-------GTG---------------G-A---------------------------ACCCTTGTTC-CAA-----------------------G--AT-----A----GCAGAT------TCTAGCTA-------TACGGAGTCCT-------CTTA---AACTA--------------------------------------------------------------GTTTTCGAGC----TAGCT-----------TT------------------------T----TGATTCATTATACCCGATACTCAAAAT-----GAGTATTGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTTCAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCTGTCCGTCTGTCC----------------GTCCGTCC
droWil2 scf2_1100000004909:11193058-11193293 + CCTT-----------TTCCTAACT-TTTCT----G-----------------------------------------------------------------AAAG--GA-----A----TTAATC------ATATGGTATT---TAAATGAAACTCT-------TT-------------------------------------------------------------------------------------------------------------------------------------TAATTTGGTATACCATGCACCCATAGG-------GTGAAATTTTTTGTTAAAGTCGCCAA-------AATTTATGTAACAGGCAGAAGGAACGTGTTCCGACCCCATAAAGTATAAATATTCTTGATCAGCATCAACATCCGAGTCGATCTAGCTTTGTCTGTCTGCCCGTCTGTCCGTCCGT--------CAGTATAAAC
droVir3 scaffold_12963:9974978-9975199 + TAACA-----CCGGTA------------------------------ATCATGTGGAGA---TTATGTC-------------------------GTTTTGAAGCG--AC-----A----TAGCTC------CGCCGCTATG---TGA--GAAAGATT-------TTAC---AAAAT--------------------------------------------------------------T---------------------------------------------------------------TTTTTTATACCATT-----CCA-------------GAGGGTTTTATAATTTTGTCGT-------GAAATGTGTAACGCATATAAGTAGACGTCTTCGACCCCATGAAGTATATATATTCTTGATCTGCATCAACAGCCGAGTCGTTATAGCCATGTCCGTCTGTCT--------------------------------
droMoj3 scaffold_6359:1562288-1562569 - ACT---GACGCCCCTGCCACGCCC-TCGCAC--AA-----------------------------------------------------------------AGTG---CTTGATA----TGAGCG------TCAAAATGTT---TGGCTGG----------------------CAA--------------------------------------------------------------G--------TTTTCTGTCT-----------TTTTGCTTTGT--------------------TTTATTTTTATACCCTGAACCCATTTTCAATGGGAAATCAGGGTATAATGGTTTTGTTGA-------AATGTATGTAACAGGGAGAAGGAGGCGTGGCAGACCCCACAAAGTATATATATTCTTGATCAGGGTGACGAGCTGAGTTGATTTGGCCCTGTCCGTCTGTCTGTCCGTCTGTCCGTCTGTCCGTATGTATGAAC
droGri2 scaffold_14624:26812-27041 + TCAT------------------------------------------------------------------------------------------------------------------------------------------------TGAATTGG-------CTAC---AAAAA--------------------------------------------------------------A--------TTA--GTTCA-----------TTTTGTCGTTGCTTATTGCGTATAATG----AGAATTTGTATACCCTGAACCCATTAA---------AAATGGGTATAATGGTTTTGTGCA-------AATGTATGTAACAGGCAGAAAGAAGCATCTCCGACCCCATAAAGTATATATATTCTTGATCAGGGTCAATAGTCGAGTCGATATAGCCATGTCCGTCTGTACGTCCGTCC----GT--------CTGTATGAAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGGACGGGTACCCCTGTCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----A----TTAGCC------TCAAGGTATG---TTCATGGAATTCT-------CTAC---AAAAG--------------------------------------------------------------A--------TTTTCTATCA-----------CCCCGCTTAGTTT-------------C----GACTTTTTAATACCCGTTACTCGT------------AAAAAGGTATACTCGGCTC-------------------------GGTAGAGTGTAGCGTTTCCGACCATATAAAGTATATATATTCTTGATCCGGATCAAAAGCCGAGTCGATCTGACCGTGTCCGTCTGTCTCTCCGTTC----------------GTATGAACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTCCGTCTGTCTCTCCGT..........................2221.00200200000000000000
......................................................................................................................TTAGCC------TCAAGGTATG---TTCATGGAAT..........................................................................................................................................................................................................................................................................................................................................................2621.00200000000200000000
....CGGGTACCCCTGTCGTAACT-TTGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGATCCGGATCAAAAGCCGAGT........................................................2720.50101000000000000000
.......GTACCCCTGTCGTAACT-TTGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50100100000000000000
..............TGTCGTAACT-TTGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000001000000000
.....................ACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----A----TTAGCC------TCA..............................................................................................................................................................................................................................................................................................................................................................................2720.50100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGACCGTGTCCGTCTGT..................................2120.50100010000000000000
......GGTACCCCTGTCGTAACT-TTGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50110000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGATCAAAAGCCGAGTCGATCT..................................................2430.33100000000100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGTATATATATTCTTGATCCGGA.....................................................................2640.25100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GTATATATATTCTTGATCCGGATC...................................................................2450.20100000000000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................GTATATATATTCTTGATCCGGATCA..................................................................2550.20100000000000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATATATATTCTTGATCCGGT.....................................................................20120.08100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCGAGTCGATCTGACC..............................................18170.06100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................AGCGTTTCCGACCATATAAAGTATATA....................................................................................27200.05100000000000010000
droSec2
TGGACGGGTACCCCTGTCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----A----TTAGCC------TCAAGGTATG---TTCATGGAATTCC-------CTAC---AAAAG--------------------------------------------------------------A--------TTTTCTATCA-----------CCCCGCTTAGTTT-------------C----GTCTTTTTAATACCCGTTACTCGT------------AAAAAGGTATATTCGGCTC-------------------------TGTAGAGGGTAGCGTTTCCGACCATATAAAGTATATATATTCTTGATCCGGATCAATAGCCGAGTCGATCTGACCGTGTCCGTCTGTCTGGCGGTTC----------------GTATGAACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................GTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----..................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..................GTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----A----TTAGC........................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................TATATATTCTTGATCCGGATCAATAGC.............................................................2730.3310001
....................................................................................................................................................................................................................................................................................................................................................................................................AGCGTTTCCGACCATATAAAGTA........................................................................................23200.0511000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGCCGAGTCGATCTGA................................................21200.0510001
.......................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCGACCATATAAAGT.........................................................................................19200.0510010
dm3
TGGACGGGTACCCCTGTCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCACGGTATG---TTCATGGAATTCT-------CTAC---AAAAG--------------------------------------------------------------A--------TTTTCTATCA-----------CCCCAATA--------CCCCTATACCT----ATCATTTTAATACCCGTTACTCGTA------------AAAAG---------GCTCTTTGA-------GAATTATGTGAAAGGTAGAGGGAAGCGTTTCCGACCATATGAAGTATA-ATATTCTTGATCAGGATCAATAGCCGAGCC---------------GTCTGTCTGTCCGTCC----------------GTATGAACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................T-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------.................................................................................................................................................................................................................................................................................................................................................................................2219.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000008
.......................T-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCA..............................................................................................................................................................................................................................................................................................................................................................................2519.0090000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000020000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001110000000
.........................TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCA..............................................................................................................................................................................................................................................................................................................................................................................2418.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
.....................ACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TC...............................................................................................................................................................................................................................................................................................................................................................................2617.0070000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000020000000
.......................T-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCAC.............................................................................................................................................................................................................................................................................................................................................................................2617.0070000000000000000000000000000000000000020000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001000
.......................T-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TC...............................................................................................................................................................................................................................................................................................................................................................................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200100000
...................TAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------.................................................................................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000100000000
.....................ACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------T................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031010000
.......................T-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCACGA...........................................................................................................................................................................................................................................................................................................................................................................2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................AACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCA..............................................................................................................................................................................................................................................................................................................................................................................2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000010000000000100000
....................AACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------T................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000
.....................ACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCA..............................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200200000
.......GTACCCCTGTCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--.........................................................................................................................................................................................................................................................................................................................................................................................................2914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCACGG...........................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGC........................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
......................CT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TC...............................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000
............CCTGTCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----T............................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ACCCCTGTCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGA............................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CCCCTGTCGTAACT-TTGCCA--G.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------.................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000
...............GTCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGA............................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCACGAGT.........................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CCTGTCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----.............................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TACCCCTGTCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGA............................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................T-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGC........................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000
......................CT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCACG............................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.................CGTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTA..........................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGC........................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TATA-ATATTCTTGATCAG.......................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GTCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTA..........................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCACGAG..........................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
..............TGTCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----.............................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCACGA...........................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000
....................AACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------.................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................CCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCAC.............................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........................TGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCAC.............................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........................TGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCA..............................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................TGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCACG............................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................AACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TT...........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TCTTTGA-------GAATTATGTGAAAGGT......................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...................TAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTA..........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGC........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................CATGGAATTCT-------CTAC---AAAAG--------------------------------------------------------------A--------.............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAG.........................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................AACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGC........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..................................G-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCACG............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TACCCCTGTCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----..................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTA..........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------.................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCAC.............................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGTATA-ATATTCTTGATCAGGATC...................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGATCAATAGCCGAG.........................................................25201.00200000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100400000000000000000000000000000000000000000000000000000000100000100000202030000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000010000000
.................CGTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGC........................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................T-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTA..........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
......................CT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCA..............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................T-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------T................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................AACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCAC.............................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
........TACCCCTGTCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--A........................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGATCAGGATCAATAGCCG...........................................................21201.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001800000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TC...............................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CCCTGTCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----.............................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGC........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
...........................GCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCACGAGT.........................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGC........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......GGTACCCCTGTCGTAACT-TTGCCA--..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................T-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCACGG...........................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............CTGTCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGA............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TGTGAAAGGTAGAGGGAAGCG...........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
.........ACCCCTGTCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AA-----..................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TGTCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----T............................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCAC.............................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----.............................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................T-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCACG............................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............CCTGTCGTAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TT...........................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------T................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCACGG...........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TATA-ATATTCTTGATCAGGAT....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............................CA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TCAC.............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...................TAACT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TTAGCC------TC...............................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................CT-TTGCCA--GG-----------------------------------------------------------------AGAG--AC-----G----TT...........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGGATCAATAGC.............................................................24200.75150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000000000000000000000000000000003000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000900000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGATCAATAGC.............................................................21200.65130000000000000000000000000040010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000100000000000000000000000000003000000000000000000000000030000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCCGTCC----------------GTATGAAC21110.5560000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000010000000000000000000000000000000010000000000010100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCCGAGCC---------------GT......................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATCAATAGCCGAGCC---------------GTCTGTC.................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATCAATAGCCGAGCC---------------GTCTGT..................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCCGAGCC---------------GTCTGTCT................................1920.5010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCGAGCC---------------GTCTGTCTGT..............................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGGATCAATAGCCGA..........................................................26200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000005010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CC---------------GTCTGTCTGTCCGTCC----------------GTA.....2150.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCCGA..........................................................21200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000002000000000000000000000000000000030000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCCGAG.........................................................22200.4080000000000000000000000000000000000000010100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000010001000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCAGGATCAATAGCCGA..........................................................20200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCCG...........................................................20200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000203000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGATCAGGATCAATAGCC............................................................20200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000000040000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCCGAGCC---------------........................................2460.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCAGGATCAATAGCC............................................................18200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCC............................................................19200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TTTTAATACCCGTTACTCGT.................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCC---------------GTCTGTCTGTCCGTCC----------------GC......2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................AGCGTTTCCGACCATATGAAGTATA-.....................................................................................2550.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCCGAGCC---------------G.......................................2550.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGGATCAATAGCC............................................................24200.2040000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000100000000
..................................................................................................................................................................................................................................................................................................................................................................................................GAAGCGTTTCCGACCATATGAAGTATA-.....................................................................................2750.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGGATCAATAGCCGAG.........................................................24200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGATCAATAGCCG...........................................................23200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................A-ATATTCTTGATCAGGATCAATAGCC............................................................2650.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................A-ATATTCTTGATCAGGATCAATAGC.............................................................2550.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGGATCAATAGCC............................................................25200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................GAAGCGTTTCCGACCATATGAAGT.........................................................................................2460.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGATCAATAGCCGAGC........................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGGATCAATAGCCGA..........................................................23200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGATCAATAGCC............................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGATCAGGATCAATAGCCGA..........................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................A-ATATTCTTGATCAGGATCAATAG..............................................................2470.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................AAGCGTTTCCGACCATATGAAGTA........................................................................................2470.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATGA---CTACCGCTGTCGTGAAG-TTGAGT--AG---A-------------------------------------------------------------ACAA--AA------------------------AAGGGATA---TTC-------------------------------------GATTGAATTTTTAATAGA------------------------------------A--------T----TATCA-----------TTCT---GAAGCT-------------T-TATTC---GTTATGAAGCGTTACCCATAGA-------GTAAAAGCGTATACTAGATTTATTGA-------AAAGCATGTAACCGATAGAAGGAAGCGTTTTCGAGTGTATAAAGTATATGTATTCTTGATCAGGATCAATAGCC-AGTCGATCTGGCCATGTCCGTC------------C----------------GTATGAACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
CTT------------GTTACAAAT-TTGGTATCGG-----------------------------------------------------------------GGAA---A-----A--TAT--GTC------TTCAGGTATA---TT------------------AAAC---AAAAGACTGCTTTGG---------------------------------------------------------------------------------------C-------------------------TTAATTTTTATACCTGTTACTCGTAAA------AGTAAAAGGGTATACTAGATTCGTTGA-------AAAGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAAGTATATATATTTTTGATCAGGATCAATAGCCGAGTCGATCTGGCCATGTCCGTCTGTCCGTCTGCCTGTCCGT--------CCGTATGAACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGAAGCGTT.........................................................................................................26201.2024000000000024
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGCCGAGTCGATCTGGCCAT............................................25200.20400400000000
.................................................................................................................................................................................................................................................................................................................................................................GTTGA-------AAAGTATGTAACAGGC......................................................................................................................21200.20404000000000
...............................................................................................................................................................................................................................................................................................................................................AAAGGGTATACTAGATTCGTTGA-------......................................................................................................................................23200.15300000030000
.................................................................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAAGCGTT.........................................................................................................25200.15300000030000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGATCTGGCCATGTCCGTCTGTC.................................27200.15300300000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTCCGTCTGCCTGTCCG...................2170.14100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGATCAATAGCCGAGTCGATCT..................................................25200.05100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TCCGACCATATAAAGTATATATATTT...............................................................................26200.05101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATATATATTTTTGATCAGGATC...................................................................22200.05100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGCCATGTCCGTCTGTCCGTCTG...........................26200.05101000000000
..............................................................................................................................................................................................................................................................................................................................................AAAAGGGTATACTAGATT...................................................................................................................................................18200.05100010000000
...................................................................................................................................................................................................................................................................................................................................AA------AGTAAAAGGGTATACTAGATTCGT................................................................................................................................................26200.05101000000000
...........................................................................................................................................................................................................................................................................................................................................................AGATTCGTTGA-------AAAGTATGTAACAGGC......................................................................................................................27200.05100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................AGGCAGAAGGAAGCGTTTCC......................................................................................................20200.05100100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTTGATCAGGATCAATAGCCGAG.........................................................27200.05101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................CGTTTCCGACCATATAAAGTATATATA..................................................................................27200.05101000000000
droEug1
TGGACGTGT-------TCGTAGCT-TCGGCA--GA-----------------------------------------------------------------AGAAT-ACATAATATA--ATAGATTCTT--AT--------------------------------A-----ATAAA--------------------------------------------------------------A--------TCTTCTATTT-----------AT---CTTAATCT-------------TATTGTTTGTGATTATACCCGTTACTTGTAGA-------GTAAAATGTTATACTAGATTGGTTCA-------AAAGTATGTAACAGATAGAAAGAAGCGTTTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCAATAGCGATGTCTATTGAGCTATGTCCGTCTGTCCGTCCGTCC----------------GTCCGTCCSizeHit CountTotal NormTotal
No Reads
droBia1
AGGCCGGGGTAGGCAGTCCTGATT-TTAATA--TG----------GAGGCTATCAACTTTA-------ATTTCTCTACGACCT-TTCGG--------------------------------------------------------------CTTCTCTAAAGTTAGC---AGAGT--------------------------------------------------------------A--------A---TTGCCA-----------CCGCAGTTA---C-------------T----GCACTTTTTATTCCCGCTTTTCATACA-------GTAAAACGGTATACTAGAA-----AG-------AAAGTATCTAACAGATAAAAGGAAGCATTTCCGACCCCATAAAATATATACATTCTTGATCAGGATCACTAGCCGAGGCGATCTAGCCATGTCCGTCCGTC--------C----------------GCATGAACSizeHit CountTotal NormTotal
No Reads
droTak1
TCAT----------------TACT-TTACGG--CA-AA--------------------------AAACCTTAAAAT-TAA-----------------------G----------------------------AAAAAATG---TTCTTGAAAATATA------AAACAATAAAAG--------------------------------------------------------------T--------ATTTTTGTC----------------------TA--------------T----AGACTAATTATACCCGTTACTCGTAGA-------GCAAAAGGGTATATTGTAT----------------------TAACAGGGAGAAGGAAGCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGGGTCACTAGCCGAGTCGATCTAGCCATGTCCGTCTGTCTGTC----T----------------TTATGATCSizeHit CountTotal NormTotal
No Reads
droEle1
TAAT-------------------T-TTTTCA--G-------------------------------------------------------------------------------A----TTGGCC------TCA-----TA---TATACGAAAATATT------TAAAA--ATAAAAATGCTTTCG---TG--------------------------------------------------------TTTCAAATTC-----------CACCACTTCGTT---------------------TTCGTAGATAACCGAAAACCG----------------------------------TCA-------GAAGCTTGGAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTGTATATAGTTTTGATCAGCATCACTAGCAGAGTCGATCTATCCATGTCCGTCTGTCTGTCCGTCC----------------GTTTCTACSizeHit CountTotal NormTotal
No Reads
droRho1
GCGC---GTTTTTCTTTTGTGGTT-TCCCCA--TG-----------------------------------------------------------------AGGC--CT-----A----TT--CC------ACAGTGCATT---TTAATT-------------------------------------------------AGAAATGTTTAACATTTTTGCAAGACTTCTCTATAAACGA--------------------------------------------------------------TATTTTTATACCCGTTACTCGTAGA-------GTAAAAGGGTATATTGTATTCGTGCA-------AAAGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCTATAAAGTATATATATTCTTGATCAGGGTCACTAGCCGAGTCGATATAGCCATGTCCGTCTGTCCGT----CC----------------GTATGAACSizeHit CountTotal NormTotal
No Reads
droFic1
CGGA----TAACTCTATCATATAG-CTGCCATAGG-----------------------------------------------------------------AGAG---------A----T----C------GAAAAATATA-----TATAGAATTAG-------TGGA---AATAA--------------------------------------------------------------A--------TTG-A------------------------------------------T----AGCATCTTTATACCCTT-----GCAGA-------GCAAAAGGGTATTATAATTTCATTCA-------GAAGTTTGCAACGCAGTGAAGGAGACACCTCAGACCCCATAAAGTATATATATTCTTGTTCAGCATCACGAGCAGAGTCGGAATACGTCTGTCCGTCTGTC----TGTTT----------------CTATGTAASizeHit CountTotal NormTotal
No Reads
droKik1
TCATT------------CTCAAA---------------------------------------------CCTTGTTCACGTGACTTCTGATTTTCCTC---AAGG--GA-----G-------------------------------------------------------------------------------------------------------------------------------------------CCA-----------CTTCAGTT--------CTCTTCTATTT----GGCATTTTTATACCCTT-----GC---------------AGGGTATTATAATTTCAGTCA-------GAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCAACAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCC----------------GTCTGTCCSizeHit CountTotal NormTotal
No Reads
droAna3
ATT----------------------TGGCCA--GTAG-AACCAGACAAGATATCGAC--------------------------------------------------------------------------------------TTTATGCCAAGCT-------TAAC---AAAAG--------------------------------------------------------------A--------TTTTATTTTA-----------TGCTA-----------------------TTTTCCTTTTTTATACCCTT-----GCA-------------GAGGGTATTATAATTTTGGTCA-------AAAGTGTGCAACGCAGTGAAGGAGAAATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTCGATATGAGCATGTCCGTCTGTCCGTCGGTCC----------------GTCTGTCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAGCATGTCCGTCTGTCCGTCGG...........................26200.70141400000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCATGTCCGTCTGTCCGTCGGT..........................25200.357700000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCATGTCCGTCTGTCCGTCGGTC.........................26200.306600000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCTGAGTCGATATGAGCATGTCC........................................25200.255050000
............................................................................................................................................................................................................................................................................................................................................................ATTTTGGTCA-------AAAGTGTGCAACG.........................................................................................................................23200.204000004
...................................................................................................................................................................................................................................................................................................................................................GGTATTATAATTTTGGTCA-------AAAGTGT...............................................................................................................................26200.204040000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCATGTCCGTCTGTCCGTCGGTCC----------------........27200.204400000
.................................................................................................................................................................................................................................................................................................................................................................................TGTGCAACGCAGTGAAGGAGAA............................................................................................................22200.153012000
..........................................................................................................................................................................................................................................................................................................................................................................................................TCCGACCCTATAAAGTATATATATTC...............................................................................26200.102020000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATGTCCGTCTGTCCGTCGG...........................22200.102100001
................................................................................................................................................................................................................................................................................................................................................................TGGTCA-------AAAGTGTGCAACG.........................................................................................................................19200.102000002
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCATGTCCGTCTGTCCGTCGGTCC----------------G.......28200.102110000
...............................................................................................................................................................................................................................................................................................................................................................TTGGTCA-------AAAGTGTGCAACGCAGTG....................................................................................................................25200.102000002
.......................................................................................................................................................................................................................................................................................................................................................................................ACGCAGTGAAGGAGAAATCTCCGACC..................................................................................................26200.051010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGATATGAGCATGTCCG.......................................21200.051010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCGTCTGTCCGTCGGTCC----------------GTC.....25200.051010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCATGTCCGTCTGTCCGTCG............................23200.051010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTCGATATGAGCATGT..........................................19200.051100000
...............................................................................................................................................................................................................................................................................................................................................................TTGGTCA-------AAAGTGTGCAACGCAGTGA...................................................................................................................26200.051000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGGATCACCTCCTGAG.........................................................28200.051100000
.....................................................................................................................................................................................................................................................................................................................................................................................................AAATCTCCGACCCTATAAAGT.........................................................................................21200.051010000
..................................................................................................................................................................................................................................................................................................................................................................................GTGCAACGCAGTGAAGGAGAAATCTCCGA....................................................................................................29200.051100000
.....................................................................................................................................................................................................................................................................................................................................................................................CAACGCAGTGAAGGAGAAATC.........................................................................................................21200.051010000
.........................................................................................................................................................................................................................................................................................................................TT-----GCA-------------GAGGGTATTATAATTTTGGTC..............................................................................................................................................26200.051000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTCTGTCCGTCGGTCC----------------GTCTGT..25200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGATCAGGATCACCT...............................................................20200.051010000
...................................................................................................................................................................................................................................................................................................................................................................................................AGAAATCTCCGACCCTATAAAGTATAT.....................................................................................27200.051010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGTCGATATGAGCATGTCCGTC.....................................25200.051001000
..............................................................................................................................................................................................................................................................................................................................................................................AAGTGTGCAACGCAGTGAAGGAGAAAT..........................................................................................................27200.051100000
.................................................................................................................................................................................................................................................................................................................................................................................TGTGCAACGCAGTGAAGGAGAAAT..........................................................................................................24200.051010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATGTCCGTCTGTCCGTCGGTCC----------------GT......27200.051100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAGCATGTCCGTCTGTCCGTCG............................25200.051010000
..............................................................................................................................................................................................................................................................................................................................................................................AAGTGTGCAACGCAGTGAAGGAGAA............................................................................................................25200.051000010
........................................................................................................................................................................................................................................................................................................................................................................................CGCAGTGAAGGAGAAATCTCCGACC..................................................................................................25200.051010000
droBip1
CGTGTAGGTTCCCCTGTTGTACCCGTTGGCT--GA-----------------------------CGGC-------------------------CTTT---AAAA-GGG-----A----T-AGCT------ACAATATATTTTCCATTTGAATCTTT--------TT-------------------------------------------------------------------------------------------------------------------------------T----AAAATATTTATACCCTT-----GCA-------------GAGGGTATTATAATTTTGTCCA-------AAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCGTCTGTCCGTCTGTCT----------------GT------SizeHit CountTotal NormTotal
No Reads
dp5
TGTTCGAGCGCCGCTTGCGATAC----------GG-----------------------------------------------------------------AGAG--CC-----G----TTAGTT----ATTCGATCTATG---TCCATA----------------CC---TAATG--------------------------------------------------------------A--------TATTCTACCATTTATTTGTCTCT---CTCATTCG-------------T----ACCTTTTTTATACCCGATACTCAAAAT-----GCGTATTGGGGTATATTAGATTTGTGGTGAAAATGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCCGTCTGTCCGT----CC----------------CTATCAGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAATGGATGTGTG..............................................................................................................................232013.95279000000027900
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCAGCATCAATAGCCGAGT........................................................22205.70114011400000000
..............................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAATGGATGTGTGTAAC..........................................................................................................................27202.104204200000000
...........................................................................................................................................................................................................................................................................................................................................................................................CCAGAAGGAATCGTTTCCGACCC.................................................................................................23201.503003000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCAGCATCAATAGCCGAGTCGAT....................................................26201.152302300000000
...................................................................................................................................................................................................................................................................................................................................................................................TGTAACGTCCAGAAGGAATCG...........................................................................................................21200.851701700000000
................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGATCAGCATCAATAGCC............................................................23200.851701700000000
................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGATCAGCATCAATAGCCGAG.........................................................26200.501001000000000
..............................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAATGGATGTGTGA.............................................................................................................................24200.501001000000000
..............................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAATGGATGT.................................................................................................................................20200.4590000000900
................................................................................................................................................................................................................................................................................................................................................................................GTGTGTAACGTCCAGAAGG................................................................................................................19200.4080000008000
.........................................................................................................................................................................................................................................................................................................................................................TTAGATTTGTGGTGAAAATGG.....................................................................................................................................21200.3570700000000
.................................................................................................................................................................................................................................................................................................................................................................GTGGTGAAAATGGATGTGTGT.............................................................................................................................21200.3060600000000
..............................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAATGGATGTGTGTAACG.........................................................................................................................28200.2040400000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATTGAGCCATGTCCGTCTG...................................21120.1720200000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGTCCGTCTGTCCGT----CC----------------........20100.1010000000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCATCAATAGCCGAGTCGATTGC.................................................27200.1020000000020
..............................................................................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAATGGAT...................................................................................................................................18200.1020000200000
..........................................................................................................................................................................................................................................................................................................................................................................................................TCCGACCCCATAAAGTATAT.....................................................................................20200.1020200000000
................................................................................................................................................................................................................................................................................................................................................................TGTGGTGAAAATGGATGTGTGA.............................................................................................................................22200.1020200000000
..........................................................................................................................................................................................................................................................................................................................................................................................TCCAGAAGGAATCGTTTCCGACCCCA...............................................................................................26200.1020000000020
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGCCATGTCCGTCTGTCC................................21120.0810100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATTGAGCCATGTCCGTCTGT..................................22120.0810100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGTCCGTCTGTCCGT----C.........................20160.0610100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATTGAGCCATGTCCGTCTT...................................21180.0610000001000
......................................................................................................................................................................................................................................................................................................................................................................GAAAATGGATGTGTGTAACGT........................................................................................................................21200.0510000000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCATCAATAGCCGAG.........................................................19200.0510100000000
................................................................................................................................................................................................................................................................................................................................................................................GTGTGTAACGTCCAGAAGGAATC............................................................................................................23200.0510010000000
...............................................................................................................................................................................................................................................................................................................................................................TTGTGGTGAAAATGGATGTGT...............................................................................................................................21200.0510000001000
......................................................................................................................................................................................................................................................................................................................................................................................AACGTCCAGAAGGAATCGTTTCCGACCCC................................................................................................29200.0510100000000
..................................................................................................................................................................................................................................................................................................................................................GGGTATATTAGATTTGTGGT.............................................................................................................................................20200.0510000001000
.........................................................................................................................................................................................................................................................................................................................................................................................GTCCAGAAGGAATCGTTTCCGACCCCA...............................................................................................27200.0510000000100
.........................................................................................................................................................................................................................................................................................................................................................TTAGATTTGTGGTGAAAATGGATG..................................................................................................................................24200.0510000000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATTGAGCCATGTCCGTC.....................................19200.0510000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGTATATATATTCTTGA...........................................................................20200.0510000000010
droPer2
CGAACCGATAC-------GTG---------------G-A---------------------------ACCCTTGTTC-CAA-----------------------G--AT-----A----GCAGAT------TCTAGCTA-------TACGGAGTCCT-------CTTA---AACTA--------------------------------------------------------------GTTTTCGAGC----TAGCT-----------TT------------------------T----TGATTCATTATACCCGATACTCAAAAT-----GAGTATTGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTTCAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCTGTCCGTCTGTCC----------------GTCCGTCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................................................................................................................GTGTGTAACGTTCAGAAGGAATCGT..........................................................................................................25200.153030000
................................................................................................................................................................................................................................................................................................................................................................................GTGTGTAACGTTCAGAAGGAATCGTT.........................................................................................................26200.153030000
.............................................................................................................................................................................................................................................................................................................................CTCAAAAT-----GAGTATTGGGGTATA..........................................................................................................................................................23200.153030000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCTGTCTGTCCGTCTGT..........................21200.102020000
.............................................................................................................................................................................................................................................................................................................................CTCAAAAT-----GAGTATTGGGGTATATTAG......................................................................................................................................................27200.102020000
.............................................................................................................................................................................................................................................................................................................................................................................GATGTGTGTAACGTTCAGAAG.................................................................................................................21200.102000002
....................................................................................................................................................................................................................................................................................................................................................GTATATTAGATTTGTGGTAAA..........................................................................................................................................21200.102020000
......................................................................................................................................................................................................................................................................................................................................................................................AACGTTCAGAAGGAATCGTTTCCGA....................................................................................................25200.102011000
...................................................................................................................................................................................................................................................................................................................................AT-----GAGTATTGGGGTATATTAGATTT..................................................................................................................................................25200.051010000
...............................................................................................................................................................................................................................................................................................................................CAAAAT-----GAGTATTGGGGTATATTAGATT...................................................................................................................................................28200.051100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCTGTCCGTCTGTCC----------------........21200.051010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGTCTGTCTGTCCGTCTG...........................21200.051000001
......................................................................................................................................................................................................................................................................................................................................................................................AACGTTCAGAAGGAATCGTTTCCGACC..................................................................................................27200.051010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCGAGTCGATTGAGCCATG...........................................21200.051010000
.............................................................................................................................................................................................................................................................................................................................................................................GATGTGTGTAACGTTCAGAAGGAA..............................................................................................................24200.051010000
......................................................................................................................................................................................................................................................................................................................................................................................AACGTTCAGAAGGAATCGTTTCCG.....................................................................................................24200.051010000
...............................................................................................................................................................................................................................................................................................................................CAAAAT-----GAGTATTGGGGTAT...........................................................................................................................................................20200.051000001
................................................................................................................................................................................................................................................................................................................................................................................GTGTGTAACGTTCAGAAGGAATC............................................................................................................23200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................TGTGTGTAACGTTCAGAAGGAATCGTTT........................................................................................................28200.051010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCATCAATAGCCGAGT........................................................20200.051000001
droWil2
CCTT-----------TTCCTAACT-TTTCT----G-----------------------------------------------------------------AAAG--GA-----A----TTAATC------ATATGGTATT---TAAATGAAACTCT-------TT-------------------------------------------------------------------------------------------------------------------------------------TAATTTGGTATACCATGCACCCATAGG-------GTGAAATTTTTTGTTAAAGTCGCCAA-------AATTTATGTAACAGGCAGAAGGAACGTGTTCCGACCCCATAAAGTATAAATATTCTTGATCAGCATCAACATCCGAGTCGATCTAGCTTTGTCTGTCTGCCCGTCTGTCCGTCCGT--------CAGTATAAACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAACA...............................................................19200.05100010
...................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAGTATAAATATTCTTGATCAGCA.....................................................................27200.05101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCGTCTGTCCGTCCG...................18200.05100010
droVir3
TAACA-----CCGGTA------------------------------ATCATGTGGAGA---TTATGTC-------------------------GTTTTGAAGCG--AC-----A----TAGCTC------CGCCGCTATG---TGA--GAAAGATT-------TTAC---AAAAT--------------------------------------------------------------T---------------------------------------------------------------TTTTTTATACCATT-----CCA-------------GAGGGTTTTATAATTTTGTCGT-------GAAATGTGTAACGCATATAAGTAGACGTCTTCGACCCCATGAAGTATATATATTCTTGATCTGCATCAACAGCCGAGTCGTTATAGCCATGTCCGTCTGTCT--------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................TC-------------------------GTTTTGAAGCG--AC-----A----TAGCTC------CG...............................................................................................................................................................................................................................................................................................................................................................................24200.153003000000000000000000000000000000000000000000000000000000000000
.......................................................AGA---TTATGTC-------------------------GTTTTGAAGCG--A........................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TTATAATTTTGTCGT-------GAAATGTGT.............................................................................................................................24200.051000000000000000000000000000001000000000000000000000000000000000
..................................................................TC-------------------------GTTTTGAAGCG--AC-----A----TAGCTC------C................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000001000000000000000000000000000000000000000
droMoj3
ACT---GACGCCCCTGCCACGCCC-TCGCAC--AA-----------------------------------------------------------------AGTG---CTTGATA----TGAGCG------TCAAAATGTT---TGGCTGG----------------------CAA--------------------------------------------------------------G--------TTTTCTGTCT-----------TTTTGCTTTGT--------------------TTTATTTTTATACCCTGAACCCATTTTCAATGGGAAATCAGGGTATAATGGTTTTGTTGA-------AATGTATGTAACAGGGAGAAGGAGGCGTGGCAGACCCCACAAAGTATATATATTCTTGATCAGGGTGACGAGCTGAGTTGATTTGGCCCTGTCCGTCTGTCTGTCCGTCTGTCCGTCTGTCCGTATGTATGAACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCTGTCTGTCCGTCTGTCC....................21200.204400000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATTTGGCCCTGTCCGTC.....................................21200.102002000
.........................................................................................................................................................................................................................................................................................................................................................ATGGTTTTGTTGA-------AATGTATGTA............................................................................................................................23200.051000001
..........................................................................................................................................................................................................................................................................................................................................................TGGTTTTGTTGA-------AATGTATGTAACAGG.......................................................................................................................27200.051100000
droGri2
TCAT------------------------------------------------------------------------------------------------------------------------------------------------TGAATTGG-------CTAC---AAAAA--------------------------------------------------------------A--------TTA--GTTCA-----------TTTTGTCGTTGCTTATTGCGTATAATG----AGAATTTGTATACCCTGAACCCATTAA---------AAATGGGTATAATGGTTTTGTGCA-------AATGTATGTAACAGGCAGAAAGAAGCATCTCCGACCCCATAAAGTATATATATTCTTGATCAGGGTCAATAGTCGAGTCGATATAGCCATGTCCGTCTGTACGTCCGTCC----GT--------CTGTATGAACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................................................................................................................................................................................TCGTTGCTTATTGCGTATAATG----AG.......................................................................................................................................................................................................2411.00101

Generated: 05/18/2015 at 12:04 PM