ID:

dsi_12760

 Coordinate:

3r:19594097-19594349 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-44.7 -44.4 -44.4

Flybase annnotation

exon [3r_19594350_19594649_+]; CDS [3r_19594350_19594649_+]; exon [3r_19593928_19594096_+]; CDS [3r_19593928_19594096_+]; intron [3r_19594097_19594349_+]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGTCCCTGCTCTCCATGGCCTGCTCTGCGGGCTACTACGAATTGGCTCAGGTATGAATTTGACTAATTTCGGTAACTCGGTAATTCTGCTGGGAACTAGTAAATTATTTATAAAGTAAATGCATCACGTGCCAACTACATCTCCACTGACGTTTTCCCACTCAGCTGGTTTATCGATAAATAGCCCCGAATTAGTTCGCAGCTAACAAAACAATGCCGACAGAGTCGAAAAAGACGAAACAAGAAATAGACATTACGTGGGGCAATTCAAGGATACATCTAATATAATCTTCTACTGTCATAGGTTCTGCTGGCCATGTCTGCCGCCCAGGTGGAGGACAAAGGGCAAAAGGA
**************************************************.......(((((((....((((((.............((((.((((((((...((((((((...(((((.((((...))))...........(((((((.((......)))))).))))))))..))))))))......)))))))).))))...........))))))...)))))))...................((((....((((((........(((....))).........))))))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M053
female body
 M023
head
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
.GTCCCTGCTCTCCATGGC.............................................................................................................................................................................................................................................................................................................................................. 18 0 1 2.00 2 2 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................CTGCCGCCCAGGTGGAGGAC.............. 20 0 1 2.00 2 2 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................CTGCCGCCCAGGTGGAGGA............... 19 0 1 1.00 1 0 1 0 0 0 0 0 0
..TCCCTGCTCTCCATGGCCTG........................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................ATGTCTGCCGCCCAGGTGGAGGA............... 23 0 1 1.00 1 0 1 0 0 0 0 0 0
.......................TCTGCGGGCTACTACGAATTGGCG.................................................................................................................................................................................................................................................................................................................. 24 1 1 1.00 1 0 0 1 0 0 0 0 0
.......................TCTGCGGGCTACTACGAATTGGCT.................................................................................................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................CTGCCGCCCAGGTGGAGGACAAAGG......... 25 0 1 1.00 1 0 1 0 0 0 0 0 0
.GTCCCTGCTCTCCATGGCCTGCTCTGCGG................................................................................................................................................................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0
................................TACTACGAATTGGCTCAG............................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0
..........................................................................ACTCGGTAATTCTGCTGGGAACT................................................................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................ATTCCGGTAAGTCGGTA............................................................................................................................................................................................................................................................................... 17 2 4 0.25 1 0 0 0 0 1 0 0 0
...............................................CAGGTAGGAGTTTGACT................................................................................................................................................................................................................................................................................................. 17 2 11 0.18 2 0 0 0 0 0 0 1 1
......................................................................................................................................................................................................................................................................................................................................CCAGGTGGAGCACAAGGGGGA...... 21 3 7 0.14 1 0 0 0 0 0 1 0 0

Anti-sense strand reads

TCAGGGACGAGAGGTACCGGACGAGACGCCCGATGATGCTTAACCGAGTCCATACTTAAACTGATTAAAGCCATTGAGCCATTAAGACGACCCTTGATCATTTAATAAATATTTCATTTACGTAGTGCACGGTTGATGTAGAGGTGACTGCAAAAGGGTGAGTCGACCAAATAGCTATTTATCGGGGCTTAATCAAGCGTCGATTGTTTTGTTACGGCTGTCTCAGCTTTTTCTGCTTTGTTCTTTATCTGTAATGCACCCCGTTAAGTTCCTATGTAGATTATATTAGAAGATGACAGTATCCAAGACGACCGGTACAGACGGCGGGTCCACCTCCTGTTTCCCGTTTTCCT
**************************************************.......(((((((....((((((.............((((.((((((((...((((((((...(((((.((((...))))...........(((((((.((......)))))).))))))))..))))))))......)))))))).))))...........))))))...)))))))...................((((....((((((........(((....))).........))))))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR902009
testis
.............................................................TGATGAAAGCCTTAGAGCCA................................................................................................................................................................................................................................................................................ 20 3 2 0.50 1 1 0 0 0 0
..........................................................AACTGATTCAAGTCATTG..................................................................................................................................................................................................................................................................................... 18 2 4 0.25 1 0 1 0 0 0
................................................................................................................................................................................................................................................................................TAAGATGATTATATTAGAAG............................................................. 20 3 14 0.07 1 0 1 0 0 0
............................................................................................................................ATGTACGGTTGATGTAG.................................................................................................................................................................................................................... 17 2 16 0.06 1 0 0 1 0 0
....................................................................................................................................................................................................................................TTTTCTGCTATCTTCTTGAT......................................................................................................... 20 3 20 0.05 1 0 0 0 0 1
.......................................................................................................................................................AAAAGGGTCAGTCGAGGAAA...................................................................................................................................................................................... 20 3 20 0.05 1 0 0 1 0 0
..............................................................................................................................................GGTGGCTGCAAAAGGGAT................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:19594047-19594399 + dsi_12760 AGT-------CCCTGCTCTCCATGGCCTGCTCTGCGGGCTACTACGAATTGGCTCAGGTATG------------------------------AATTTGACTA-ATTTCGGTAACTC-------------------------------------------------------------------------GGTAATTCTGCTGG------GAACTAGT---------------AAATTATTTAT---AAAGT--AAATGCA-----------TCACGT-----------------GCCAACTAC-----------------------------ATCTCCAC---TG-ACGTTTTCCC-ACTCAGCTG--GTTTATCGATAAATAGCCCCGA-ATT-AGTTCGCAGCTAAC--AAA--ACAATGCCGACAGAGTCG-AAAAAGACGAAACAAGA--AATAGAC-ATTACGTGGGGCAATTCAAG-GAT--ACAT-----C--------------TAATATAATCTTCT------------ACTG-----TCATAGGTTCTGCTGGCCATGTCTGCCGCCCAGGTGGAGGACAAAGGGCAAAAGGA
droSec2 scaffold_0:20394589-20394995 + AGT-------CCCTGCTCTCCATGGCCTGCTCTGCGGGCTACTACGAGTTGGCTCAGGTATGAAGGGTTATGATCTCTCTAAAACGTTTTGCAATTTGACTA-ATTTCGGTAACTC-------------------------------------------------------------------------GGTAATTCTGCTGG------GAACTAGT---------------AAATTATTTAT---AAAGT--AAATGCA-----------TCAC-------------------GCCAATTACATTTTTAACGGGCTATTCGTCGACGTAGCATCGCCAC---TC-AC----GCCC-ACTCAGCTG--GTTTATCGATAAATAGCCCCGA-ATT-AGTTCGCAGCTAAG--AAAA-AAAATGCCGACAAAGTCG-AAAAAGACGAAACAAGA--AATAGAC-ATTACGTGGGGCAATTCATG-GAC--ACAT-----C--------------TAATCTATTCTAAT------------ACTG-----TCATAGGTTCTGCTGGCCATGTCTGCCGCCCAAGTGGAGGACAAAGGGCAAAAGGA
dm3 chr3R:20062186-20062594 + AGT-------CCCTGCTCTCAATGGCCTGCTCTGCGGGCTACTACGAATTGGCTCAGGTATGTAGTGTTATAATCACTCCAAAACGTTTTGGAATTTGACTA-ATTTCGGTAACTC-------------------------------------------------------------------------GGTAATTCTGCTGG------AAACTAGA---------------AAAATATTTAT---AAAGT--AAATGCACCTTTATTATATTGCGT-----------------GTCAACTAC--------------GTTCGTCGACGTGGCATCGCCAC---TG-ACGTTTGCCC-ACTCAGATG--GTTTATCGATAAATAGCCCTGA-ATT-AGTGTGCAACTAAT--TAA--ACAATGCCGACAGAGTTG-AAAAAGACAAAACAAGA--AATAAAA-ATAACTTCGGGCAATTCAAG-ACC--ACAT-----C--------------TAATCTAATCTTCG------------ACTG-----TCATAGGTTCTCCTGGCCATGTCTGCCGCCCAGGTGGAGGACAAAGGGCAAAAGGA
droEre2 scaffold_4820:7999872-8000265 - AGT-------CCCTGCTCTCGATGGCCTGCTCTGCGGGCTATTACGAATTGGCACAGGTATGTTGCGTTATAATCTCTCCGAAACGGTTTGCAATTTGACAACATTTC---------------------------------------------------------------------------------GGTAATTCTGCTCA------AAACTAGT---------------AAAATAATCAT---A-TGT--AAATACACCTT-----TTTCACGT-----------------GCCATCTA---ATTTCACGGGCTATTCGTCAACGTGGCAACGCCGC--------------------CAGCTG--GTTTATCGATAAATAGCCCCGA-ATT-AGTTAGCAGCAATC--AAA--ACAGTTCCACGAGAGTCG-GAAAAGAACAAA-AACA--AATAGAC-ATTACGTGGG-AAATTCAAG-ACC--AAAT-----CT-------CACC---AATCTAATCCTCG------------ACTG-----TAATAGGTTCTGCTGGCCATGTCTGCCGCCCAGGTGGAGGACAAAGGACAAAAGGA
droYak3 3R:26444485-26444849 - AGT-------CCCTGCTCTCGATGGCCTGCTCTGCGGGTTACTACGAATTGGCTCAGGTATGTTGCATTACAATCTCTCAAAAACTTTTTGCCATTTAACTA-G-----------------------------------------------------------------------------------------ATTCTGGTCA------AAACTAGT---------------TA--------A---AAAAA--AAATACACCTTGTTTTTTTCACGT-----------------GCCAACTA---ATTTCACGGGCTATTCGTCGACGTGGCAACGCCGCCACTGAACGCTTGCCC-GCTCAGCTG--GTTTATCGATAAATAGGCCCGA-ATT-AGTTAGCAGCAAAC--AAA--ACAATTCCGCAAGA-------------------------------------------TAATTCTAG-ACC--GAAT---------------ATCACTAATCTAATCTTCG------------TCTG-----TCGTAGGTTCTGCTGGCCATGTCTGCCGCCCAGGTGGAGGACAAAGGGCAAAAGGA
droEug1 scf7180000409798:326647-327062 - AAT-------CCCTCCTTTCGATGGCTTGCTCTGCGGGCTACTACGAACTGGCTCAGGTATATTCCA---------------AATGTTT----------CTA-GTCTCGT----------------------------------GTTTTTCCCCATTTTGACCTTTCATATACGATC-------GCTTTCATCGTTCCGCTCAGA-TGAAAACAGATATAATAGAAATCACTGAA-TATTTATTATATAAAAAAAA--------------------------------------------------TCTTAT-GGCAAATCGCCGGTGTGGCAACGCCGTTT----------------TTCGATCG--GCCTATCGATAAATAGCCCCGA-ATTTATTTAGTAGCAGGCACAAC--ACAATCCTGCTGTAGTGA-AAAAAGACCAA----TA--TTTAGTG-ATTACGTGGG-CAAATAAAG-ACTTTCAAT-----CT-------AGCCATTATCCTTATCTTCG------------ATTG-----TTACAGGTTTTGCTGGCCATGTCTGCAGCTCAAGTGGAGGACAAAGGGCAAAAGGA
droBia1 scf7180000302136:414712-414930 + G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCAACACCGTGCCCATACGCTTGCCC-TCTCAGCTGTTGCCTATCGATAAATAC-------------TTAGCAGCAGACA----A-ACAATCCTGAAAGAGTCG-AAAAAGACCAA----TA--AATAGGGCATTACGTGGG-CAAATTAAG-TGCGTACAC-----CT-------TACCAAATACTTAATCTCTA------------ACCG-----CCACAGGTTCTGCTGGCCATGTCTGCCGCCCAGGTGGAGGACAAGGGGCAGAAGGA
droTak1 scf7180000415769:2386837-2387024 - C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGCTGTGGCCTATCGATAAACAT--------TT-AGCTAG---CAGACA----AACAAATCCTTC--GAGTCG-AAAAAGACCAA----GA--AATAGGG-ATTACGTGGG-CAAATTGAG-ACCTTAAAC-----CT-------GACCACAAACCAAATCTCCG------------ACTG-----TCACAGGTTCTGCTGGCCATGTCTGCCGCCCAGGTGGAGGACAAGGGGCAGAAGGA
droEle1 scf7180000491008:364962-365431 + AAT-------CCCTGCTCTCGATGGCTTGCTCCGCGGGTTACTACGAACTGGCTCAGGTATGG----TTAT--------------------------CTCTT-TTTTTATAGAGTTGGCAATTTAATTTTAGTAAATGATCCGAGTT---------------------TTTACGGTGTGTTATG-------TTT-----TTAAGGTTGAGACTTTTTACAATATATATAAGT-AA-TTTTTATTAGCGGCAG-AAA--TATTT------ATTTTTGTACCTGTAATTTTCTTACGCCA-------------------TTTTGACAATATGGCAACGCCACCCGTACACTTTTGTACTCCTGATTTG--GCCTATCGATAAATACCTCGAG-ATG-AG--AGCCGCAGACA----AA-C-ATCCTGCGGTTTTCGGAAAAAGACAAATAAAGA--G-------ATTAGCCGTG-CAAATGCATTTCCTTGCAC-----CTTGCGTTTGACTCGTAACCTTATATCCAACTGTCTGTTTATTTT-----GCACAGGTTCTCCTGGCCATGTCTGCCGCCCAGGTGGAGGACAAGGGTCAAAAGGA
droRho1 scf7180000779477:140056-140226 + T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATCGATAAATAC-CTGGAGTTC-AA--ATCGGCAGACA----AACAAAATCTGCAGGAGTCGCGAGAAGAAAA---TACAAATTTAGAC-GT-----G------------------AAGA-----TT-------TATCATGCAACTATCC-----------GTTTATTTG-----CCACAGGTTCTGCTGGCCATGTCTGCCGCCCAGGTGGAGGACAAGGGTCAAAAGGA
droFic1 scf7180000453912:1226818-1227021 + AC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTGCAT-TCACAACTG--GCTTATCGATAAACGC--CCGA-TTT-AT-------AAGGCA----AA-C-ATCCTCAAGGAGCAG-AAAAGGAACAA----GG--A-------ATTACTTCAG-CGAATTGTTAAT-----GTTTTAACCTGCAACTGATCCGAAACTTTATCTTT--------GTTAATACC-----CTGCAGGTCCTTCTAGCCATGTCTGCCGCCCAGGTGGAGGACAAGGGCCAAAAAGA
droKik1 scf7180000302778:486404-486458 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGGTTCTGCTGGCCATGTCTGCCGCCCAGGTGGAGGACAAGGGGCAAAAGGA
droAna3 scaffold_13340:22434579-22434654 - TATAAAATTATACTGCTCAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAGGTTCTACTGGCCATGTCAGCCGCTCAGGTGGAGGACAAGGGTCAAAAGGA
droBip1 scf7180000396721:720375-720441 + C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------ACTGTTTACCAACAGGTTCTACTGGCCATGTCAGCCGCTCAGGTGGAGGACAAGGGTCAAAAGGA
dp5 2:14599806-14599860 + AGT-------CCCTGCTATCAATGGCCTGCTCTGCGGGCTACTATGAATTGGCACAGGTATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_0:5818098-5818152 - AGT-------CCCTGCTATCAATGGCCTGCTCTGCGGGCTACTATGAATTGGCACAGGTATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004902:2845860-2845938 - AGT-------CCCTGCTGTCAATGGCCTGTTCTGCAGGATACTTTGAACTGGCCCAGGTAAGGGATAT-----------------------------GATTT-TCTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACTC
droVir3 scaffold_12855:1022964-1023033 - AT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGTTT------------TTTG-----AAATAGGTTTTGCTGGCTATGTCAGCAGCTCAGGTCGAGGACAAAGGACAAAAAGA
droMoj3 scaffold_6540:7513231-7513297 + AAT-------CTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCA-----AAATAGGTTCTGCTAGCTATGTCAGCTGCCCAAGTCGAGGACAAAGGACAAAAAGA
droGri2 scaffold_14906:2115436-2115489 - A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGGTTTTGCTGGCAATGTCTGCGGCACAGGTAGAGGACAAGGGACAAAAAGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGT-------CCCTGCTCTCCATGGCCTGCTCTGCGGGCTACTACGAATTGGCTCAGGTATG------------------------------AATTTGACTA-ATTTCGGTAACTC-------------------------------------------------------------------------GGTAATTCTGCTGG------GAACTAGT---------------AAATTATTTAT---AAAGT--AAATGCA-----------TCACGT-----------------GCCAACTAC-----------------------------ATCTCCAC---TG-ACGTTTTCCC-ACTCAGCTG--GTTTATCGATAAATAGCCCCGA-ATT-AGTTCGCAGCTAAC--AAA--ACAATGCCGACAGAGTCG-AAAAAGACGAAACAAGA--AATAGAC-ATTACGTGGGGCAATTCAAG-GAT--ACAT-----C--------------TAATATAATCTTCT------------ACTG-----TCATAGGTTCTGCTGGCCATGTCTGCCGCCCAGGTGGAGGACAAAGGGCAAAAGGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.GT-------CCCTGCTCTCCATGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200200000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCGCCCAGGTGGAGGAC..............2012.00200200000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCGCCCAGGTGGAGGA...............1911.00100010000000000000
..T-------CCCTGCTCTCCATGGCCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCTGCCGCCCAGGTGGAGGA...............2311.00100010000000000000
..............................TCTGCGGGCTACTACGAATTGGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000000000
..............................TCTGCGGGCTACTACGAATTGGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCGCCCAGGTGGAGGACAAAGG.........2511.00100010000000000000
.GT-------CCCTGCTCTCCATGGCCTGCTCTGCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100010000000000000
.......................................TACTACGAATTGGCTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
................................................................................................................ACTC-------------------------------------------------------------------------GGTAATTCTGCTGG------GAACT.....................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
droSec2
AGT-------CCCTGCTCTCCATGGCCTGCTCTGCGGGCTACTACGAGTTGGCTCAGGTATGAAGGGTTATGATCTCTCTAAAACGTTTTGCAATTTGACTA-ATTTCGGTAACTC-------------------------------------------------------------------------GGTAATTCTGCTGG------GAACTAGT---------------AAATTATTTAT---AAAGT--AAATGCA-----------TCAC-------------------GCCAATTACATTTTTAACGGGCTATTCGTCGACGTAGCATCGCCAC---TC-AC----GCCC-ACTCAGCTG--GTTTATCGATAAATAGCCCCGA-ATT-AGTTCGCAGCTAAG--AAAA-AAAATGCCGACAAAGTCG-AAAAAGACGAAACAAGA--AATAGAC-ATTACGTGGGGCAATTCATG-GAC--ACAT-----C--------------TAATCTATTCTAAT------------ACTG-----TCATAGGTTCTGCTGGCCATGTCTGCCGCCCAAGTGGAGGACAAAGGGCAAAAGGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAAGTGGAGGACAAAGGG........2111.0010001
.................................................TGGCTCAGGTATGAAGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGTCTGCCGCCCAAGTGGAGGA...............2511.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCCAAGTGGAGGACAAAGGG........2311.0010010
........................................................................................................................................................................................................................................................................................................................GGGCTATTCGTCGACGTA.................................................................................................................................................................................................................................................................................1811.0011000
.......................................TACTACGAGTTGGCTCAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.............................CTCTGCGGGCTACTACGAGTTGGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
dm3
AGT-------CCCTGCTCTCAATGGCCTGCTCTGCGGGCTACTACGAATTGGCTCAGGTATGTAGTGTTATAATCACTCCAAAACGTTTTGGAATTTGACTA-ATTTCGGTAACTC-------------------------------------------------------------------------GGTAATTCTGCTGG------AAACTAGA---------------AAAATATTTAT---AAAGT--AAATGCACCTTTATTATATTGCGT-----------------GTCAACTAC--------------GTTCGTCGACGTGGCATCGCCAC---TG-ACGTTTGCCC-ACTCAGATG--GTTTATCGATAAATAGCCCTGA-ATT-AGTGTGCAACTAAT--TAA--ACAATGCCGACAGAGTTG-AAAAAGACAAAACAAGA--AATAAAA-ATAACTTCGGGCAATTCAAG-ACC--ACAT-----C--------------TAATCTAATCTTCG------------ACTG-----TCATAGGTTCTCCTGGCCATGTCTGCCGCCCAGGTGGAGGACAAAGGGCAAAAGGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAGGTGGAGGACAAAG..........1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAGGTGGAGGACAAAGGG........2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGCCGCCCAGGTGGAGGACAAA...........2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CTGCGGGCTACTACGAATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TCAATGGCCTGCTCTGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAGGTGGAGGACAAAGGGC.......2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
..............GCTCTCAATGGCCTGCTCTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GCTCTGCGGGCTACTACGAATTGGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CAATGGCCTGCTCTGCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GCTACTACGAATTGGCTCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGAGGACAAAGGG........1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCAGGTGGAGGACAAAGGG........2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGGTGGAGGACAAAGGGC.......2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACAAAGGGCAAAAGGA1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................TGACTA-ATTTCGGTAACTC-------------------------------------------------------------------------GGT...........................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AATGGCCTGCTCTGCGGGCTACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCCCAGGTGGAGGACAAAG..........2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCGCCCAGGTGGAGGA...............1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGTGGAGGACAAAGGGC.......1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000
..............GCTCTCAATGGCCTGCTCTGCGGGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--------------TAATCTAATCTTCG------------ACTG-----TCATAG..................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TCAACTAC--------------GTTCGTCGACGTG.................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CTGCTCTGCGGGCTACTACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-ATAACTTCGGGCAATTCAAG-ACC--AC.................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCCTGGCCATGTCTGCC.............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAATCTTCG------------ACTG-----TCATAG..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--------------TAATCTAATCTTCG------------ACTG-----T.......................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT-----C--------------TAATCTAATCTTCG------------ACTG-----TCATA...................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATCTTCG------------ACTG-----TCATAG..................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................CTCAATGGCCTGCTCTGCGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGGTGGAGGACAAAGGG........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCTAATCTTCG------------ACTG-----TCATA...................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAGGACAAAGGGCA......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGCGGGCTACTACGAATTGGCTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCTGCCGCCCAGGTGGAGGACA.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CTCTCAATGGCCTGCTCTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTCCTGGCCATGTCTGC..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCAGGTGGAGGACAAAGGGC.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCTAATCTTCG------------ACTG-----TCATAGGT................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................GCGT-----------------GTCAACTAC--------------GTTCGTCG......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..T-------CCCTGCTCTCAATGGCCTGCTCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGACAAAGGGCAAAAGGA2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TGCTCTGCGGGCTACTACGAATTGGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGCCGCCCAGGTGGAGGA...............2211.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CTGCTCTCAATGGCCTGCTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACAAGA--AATAAAA-ATA..........................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..............................................AATTGGCTCAGGTATGTAGTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCCCAGGTGGAGGACAAAGGG........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................CGT-----------------GTCAACTAC--------------GTTCGTCGAC....................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCAGGTGGAGGACAAAGGGA.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CTACTACGAATTGGCTCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................AGGTATGTAGTGTTATAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................ATGTAGTGTTATAATCACTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTCCTGGCCATGTCTGCCG............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................ACTACGAATTGGCTCAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................GCTCTGCGGGCTACTACGAATTGGCTCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCTGCCGCCCAGGTGG...................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................GCGGGCTACTACGAATTGGCTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGTGGAGGACAAAGGG........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-----C--------------TAATCTAATCTTCG------------ACTG-----T.......................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.GT-------CCCTGCTCTCAATGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAATCTTCG------------ACTG-----TCATAT..................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-----C--------------TAATCTAATCTTCG------------ACTG-----TCA.....................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GCTACTACGAATTGGCTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-ACC--ACAT-----C--------------TAATCTAATCTTCG------------.................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGACAAAGGGCAAAAGG.1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATCTTCG------------ACTG-----TCATA...................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCTGCCGCCCAGGTGGAGGA...............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCCGCCCAGGTGGAGGACAAAGGGC.......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................CTACGAATTGGCTCAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCCAGGTGGAGGACAAAGGGC.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAATCTTCG------------ACTG-----TCATAG..................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCGACAGAGTTG-AAA.....................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
...............................................ATTGGCTCAGGTATGTAGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAATCTTCG------------ACTG-----TCAT....................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGCCGCCCAGGTGGAGGT...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAT-----C--------------TAATCTAATCTTCG------------ACTG-----TCATA...................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCCCAGGTGGAGGACAAAGGG........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCCCAGGTGGAGGACAAAGG.........2411.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TCAGATG--GTTTATCGAGC................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGT-------CCCTGCTCTCGATGGCCTGCTCTGCGGGCTATTACGAATTGGCACAGGTATGTTGCGTTATAATCTCTCCGAAACGGTTTGCAATTTGACAACATTTC---------------------------------------------------------------------------------GGTAATTCTGCTCA------AAACTAGT---------------AAAATAATCAT---A-TGT--AAATACACCTT-----TTTCACGT-----------------GCCATCTA---ATTTCACGGGCTATTCGTCAACGTGGCAACGCCGC--------------------CAGCTG--GTTTATCGATAAATAGCCCCGA-ATT-AGTTAGCAGCAATC--AAA--ACAGTTCCACGAGAGTCG-GAAAAGAACAAA-AACA--AATAGAC-ATTACGTGGG-AAATTCAAG-ACC--AAAT-----CT-------CACC---AATCTAATCCTCG------------ACTG-----TAATAGGTTCTGCTGGCCATGTCTGCCGCCCAGGTGGAGGACAAAGGACAAAAGGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................AACGGTTTGCAATTTGACAACATTTC---------------------------------------------------------------------------------GGT...........................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAGGTGGAGGACAAAGG.........2011.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCAGGTGGAGGACAAAGGACAAAA...2711.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCCATGTCTGCCGCCCAGGT.....................2311.0010000010
..........................................TACGAATTGGCACAGGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAGGTGGAGGACAAAGGA........2111.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCCCAGGTGGAGGACAAAGGAC.......2511.0010001000
..............................................................................................................................................................................................................................................................................................................................................................................................................TAGCAGCAATC--AAA--ACAGTT.....................................................................................................................................................................................2011.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGCCGCCCAGGTGGAGG................2111.0010001000
droYak3
AGT-------CCCTGCTCTCGATGGCCTGCTCTGCGGGTTACTACGAATTGGCTCAGGTATGTTGCATTACAATCTCTCAAAAACTTTTTGCCATTTAACTA-G-----------------------------------------------------------------------------------------ATTCTGGTCA------AAACTAGT---------------TA--------A---AAAAA--AAATACACCTTGTTTTTTTCACGT-----------------GCCAACTA---ATTTCACGGGCTATTCGTCGACGTGGCAACGCCGCCACTGAACGCTTGCCC-GCTCAGCTG--GTTTATCGATAAATAGGCCCGA-ATT-AGTTAGCAGCAAAC--AAA--ACAATTCCGCAAGA-------------------------------------------TAATTCTAG-ACC--GAAT---------------ATCACTAATCTAATCTTCG------------TCTG-----TCGTAGGTTCTGCTGGCCATGTCTGCCGCCCAGGTGGAGGACAAAGGGCAAAAGGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCGCCCAGGTGGAGGAC..............2013.00320100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAATCTTCG------------TCTG-----TCGTAG..................................................2112.00202000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATCTTCG------------TCTG-----TCGTAG..................................................2011.00100001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCTGCCGCCCAGGTGGAGGA...............2311.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAGGTGGAGGACAAAGGGC.......2211.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................TGCCC-GCTCAGCTG--GTTTATCGATA................................................................................................................................................................................................................................2511.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCCCAGGTGGAGGACAAAGGGCA......2611.00101000000000
.....................................................................................................A-G-----------------------------------------------------------------------------------------ATTCTGGTCA------AAACTAGT---------------T..................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.............................................................................................................................................................................................................................................................................................................A---ATTTCACGGGCTATTCGT........................................................................................................................................................................................................................................................................................1911.00100000010000
.....................................GTTACTACGAATTGGCTCAGGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
..........CCCTGCTCTCGATGGCCTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.......................................TACTACGAATTGGCTCAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
droEug1
AAT-------CCCTCCTTTCGATGGCTTGCTCTGCGGGCTACTACGAACTGGCTCAGGTATATTCCA---------------AATGTTT----------CTA-GTCTCGT----------------------------------GTTTTTCCCCATTTTGACCTTTCATATACGATC-------GCTTTCATCGTTCCGCTCAGA-TGAAAACAGATATAATAGAAATCACTGAA-TATTTATTATATAAAAAAAA--------------------------------------------------TCTTAT-GGCAAATCGCCGGTGTGGCAACGCCGTTT----------------TTCGATCG--GCCTATCGATAAATAGCCCCGA-ATTTATTTAGTAGCAGGCACAAC--ACAATCCTGCTGTAGTGA-AAAAAGACCAA----TA--TTTAGTG-ATTACGTGGG-CAAATAAAG-ACTTTCAAT-----CT-------AGCCATTATCCTTATCTTCG------------ATTG-----TTACAGGTTTTGCTGGCCATGTCTGCAGCTCAAGTGGAGGACAAAGGGCAAAAGGASizeHit CountTotal NormTotal
No Reads
droBia1
G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCAACACCGTGCCCATACGCTTGCCC-TCTCAGCTGTTGCCTATCGATAAATAC-------------TTAGCAGCAGACA----A-ACAATCCTGAAAGAGTCG-AAAAAGACCAA----TA--AATAGGGCATTACGTGGG-CAAATTAAG-TGCGTACAC-----CT-------TACCAAATACTTAATCTCTA------------ACCG-----CCACAGGTTCTGCTGGCCATGTCTGCCGCCCAGGTGGAGGACAAGGGGCAGAAGGASizeHit CountTotal NormTotal
No Reads
droTak1
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGCTGTGGCCTATCGATAAACAT--------TT-AGCTAG---CAGACA----AACAAATCCTTC--GAGTCG-AAAAAGACCAA----GA--AATAGGG-ATTACGTGGG-CAAATTGAG-ACCTTAAAC-----CT-------GACCACAAACCAAATCTCCG------------ACTG-----TCACAGGTTCTGCTGGCCATGTCTGCCGCCCAGGTGGAGGACAAGGGGCAGAAGGASizeHit CountTotal NormTotal
No Reads
droEle1
AAT-------CCCTGCTCTCGATGGCTTGCTCCGCGGGTTACTACGAACTGGCTCAGGTATGG----TTAT--------------------------CTCTT-TTTTTATAGAGTTGGCAATTTAATTTTAGTAAATGATCCGAGTT---------------------TTTACGGTGTGTTATG-------TTT-----TTAAGGTTGAGACTTTTTACAATATATATAAGT-AA-TTTTTATTAGCGGCAG-AAA--TATTT------ATTTTTGTACCTGTAATTTTCTTACGCCA-------------------TTTTGACAATATGGCAACGCCACCCGTACACTTTTGTACTCCTGATTTG--GCCTATCGATAAATACCTCGAG-ATG-AG--AGCCGCAGACA----AA-C-ATCCTGCGGTTTTCGGAAAAAGACAAATAAAGA--G-------ATTAGCCGTG-CAAATGCATTTCCTTGCAC-----CTTGCGTTTGACTCGTAACCTTATATCCAACTGTCTGTTTATTTT-----GCACAGGTTCTCCTGGCCATGTCTGCCGCCCAGGTGGAGGACAAGGGTCAAAAGGASizeHit CountTotal NormTotal
No Reads
droRho1
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATCGATAAATAC-CTGGAGTTC-AA--ATCGGCAGACA----AACAAAATCTGCAGGAGTCGCGAGAAGAAAA---TACAAATTTAGAC-GT-----G------------------AAGA-----TT-------TATCATGCAACTATCC-----------GTTTATTTG-----CCACAGGTTCTGCTGGCCATGTCTGCCGCCCAGGTGGAGGACAAGGGTCAAAAGGASizeHit CountTotal NormTotal
No Reads
droFic1
AC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTGCAT-TCACAACTG--GCTTATCGATAAACGC--CCGA-TTT-AT-------AAGGCA----AA-C-ATCCTCAAGGAGCAG-AAAAGGAACAA----GG--A-------ATTACTTCAG-CGAATTGTTAAT-----GTTTTAACCTGCAACTGATCCGAAACTTTATCTTT--------GTTAATACC-----CTGCAGGTCCTTCTAGCCATGTCTGCCGCCCAGGTGGAGGACAAGGGCCAAAAAGASizeHit CountTotal NormTotal
No Reads
droKik1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGGTTCTGCTGGCCATGTCTGCCGCCCAGGTGGAGGACAAGGGGCAAAAGGASizeHit CountTotal NormTotal
No Reads
droAna3
TATAAAATTATACTGCTCAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAGGTTCTACTGGCCATGTCAGCCGCTCAGGTGGAGGACAAGGGTCAAAAGGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAGGTGGAGGACAAGGGTC.......2212.002000011
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCTCAGGTGGAGGACAAGGGTC.......2511.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCATGTCAGCCGCTCAGGTGGAGGAC..............2811.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGTTCTACTGGCCATGTCAGCCGCTC.........................2811.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAGCCGCTCAGGTGGA..................1911.001001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCGCTCAGGTGGAGGACAAGGGTC.......2611.001000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTACTGGCCATGTCA................................1811.001010000
droBip1
C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------ACTGTTTACCAACAGGTTCTACTGGCCATGTCAGCCGCTCAGGTGGAGGACAAGGGTCAAAAGGASizeHit CountTotal NormTotal
No Reads
dp5
AGT-------CCCTGCTATCAATGGCCTGCTCTGCGGGCTACTATGAATTGGCACAGGTATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................CTACTATGAATTGGCACAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.................................GCGGGCTACTATGAATTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000001
......................................CTACTATGAATTGGCACAGGTAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
..............GCTATCAATGGCCTGCTCTGCGGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
droPer2
AGT-------CCCTGCTATCAATGGCCTGCTCTGCGGGCTACTATGAATTGGCACAGGTATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................CTACTATGAATTGGCACAGGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...............................CTGCGGGCTACTATGAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.............................CTCTGCGGGCTACTATGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
droWil2
AGT-------CCCTGCTGTCAATGGCCTGTTCTGCAGGATACTTTGAACTGGCCCAGGTAAGGGATAT-----------------------------GATTT-TCTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACTCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.GT-------CCCTGCTGTCAATGGCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00210010
.GT-------CCCTGCTGTCAATGGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00201100
................................TGCAGGATACTTTGAACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000
...................................AGGATACTTTGAACTGGCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000
....................................GGATACTTTGAACTGGCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
................................TGCAGGATACTTTGAACTGGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
..........CCCTGCTGTCAATGGCCTGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
......................................ATACTTTGAACTGGCCCAGGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
.......................................TACTTTGAACTGGCCCAGGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..................................CAGGATACTTTGAACTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
droVir3
AT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGTTT------------TTTG-----AAATAGGTTTTGCTGGCTATGTCAGCAGCTCAGGTCGAGGACAAAGGACAAAAAGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCAGCAGCTCAGGTC....................1912.002000000000000000010000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCAGCAGCTCAGGTCGAGGAC..............2412.002110000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCTCAGGTCGAGGACA.............2011.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAGCAGCTCAGGTCGAGGA...............2211.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCAGCAGCTCAGGTC....................1811.001000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCAGCAGCTCAGGTCGAGGA...............2411.001000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCAGGTCGAGGACAAAGGA........2211.001000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAGGTCGAGGACAAAGGACA......2311.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAGCAGCTCAGGTCGAGGACA.............2411.001000000000000000001000000000000000000000000000000000000000000000
droMoj3
AAT-------CTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCA-----AAATAGGTTCTGCTAGCTATGTCAGCTGCCCAAGTCGAGGACAAAGGACAAAAAGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATGTCAGCTGCCCAAGTCGAG.................2411.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGCCCAAGTCGAGGACAAAGGA........2611.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCTGCCCAAGTCGAGGAC..............2111.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGCCCAAGTCGAGGACAAAG..........2411.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTATGTCAGCTGCCCAAGTCGAGGAC..............2811.001100000
droGri2
A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGGTTTTGCTGGCAATGTCTGCGGCACAGGTAGAGGACAAGGGACAAAAAGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTCTGCGGCACAGGTA....................1911.00110

Generated: 05/18/2015 at 10:54 PM