ID:dsi_1275 |
Coordinate:3r:4665684-4665739 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3r_4665542_4665683_+]; CDS [3r_4665542_4665683_+]; CDS [3r_4665740_4665808_+]; exon [3r_4665740_4665808_+]; intron [3r_4665684_4665739_+]
No Repeatable elements found
| ##################################################--------------------------------------------------------################################################## TACGAGTGCGCATTTTGGACTTCGCCACAAGTGGCCAATGTTCGGATGCGGTAATTTGAAAATTAGTCCGATACTGGAATTCTTTTTAAATGTTTTGCTATCTTAGATCTTGCCGCATCTCATAAGGCTGCTGCTTAACGTTCTGAAAATGGACAC **************************************************...(((((((((....((((....))))....)))))))))...............************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | O002 Head |
SRR553486 Makindu_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
SRR553487 NRT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................TTGCCGCATCTCATAAGG............................. | 18 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ................................................................AGTCCGATACGAGAAGTCTTT....................................................................... | 21 | 3 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...............TGGACTTCACCAGAAGTG........................................................................................................................... | 18 | 2 | 5 | 0.20 | 1 | 0 | 0 | 0 | 1 | 0 |
| ........................................................TGAAAGTTAGTCCGA..................................................................................... | 15 | 1 | 6 | 0.17 | 1 | 0 | 0 | 1 | 0 | 0 |
| ............................................................AATTGGTCCGATACTGA............................................................................... | 17 | 2 | 17 | 0.06 | 1 | 0 | 0 | 1 | 0 | 0 |
| .......................................................GTGAAAGTTAGTCCGA..................................................................................... | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 | 0 |
| ........CTCATTTTGGACTTC..................................................................................................................................... | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 |
| ...........................................................CAATTGGTCCGATACT................................................................................. | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 | 0 |
|
ATGCTCACGCGTAAAACCTGAAGCGGTGTTCACCGGTTACAAGCCTACGCCATTAAACTTTTAATCAGGCTATGACCTTAAGAAAAATTTACAAAACGATAGAATCTAGAACGGCGTAGAGTATTCCGACGACGAATTGCAAGACTTTTACCTGTG
**************************************************...(((((((((....((((....))))....)))))))))...............************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
M025 embryo |
SRR553485 Chicharo_3 day-old ovaries |
GSM343915 embryo |
|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................ACGGCGTTAAGTATTCCGAC.......................... | 20 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| .........CGTAAAACCTGAAGCTGGGGT.............................................................................................................................. | 21 | 3 | 5 | 0.40 | 2 | 1 | 0 | 1 | 0 | 0 |
| ........................................................................TGACCTTATGAAAAATTT.................................................................. | 18 | 1 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 | 0 |
| ........GCGTAAAACCTGAAGCTGAGGT.............................................................................................................................. | 22 | 3 | 5 | 0.20 | 1 | 0 | 0 | 0 | 0 | 1 |
| ........GCGTAAAACCTGAAGCTGGGA............................................................................................................................... | 21 | 3 | 7 | 0.14 | 1 | 0 | 0 | 0 | 1 | 0 |
| .........CGTAAAACCTGAAGCTGGGG............................................................................................................................... | 20 | 3 | 7 | 0.14 | 1 | 0 | 0 | 0 | 1 | 0 |
| ..........GTAAAACCTGAAGCTGGGGT.............................................................................................................................. | 20 | 3 | 10 | 0.10 | 1 | 0 | 0 | 1 | 0 | 0 |
| .........................................................................................................CTAGGAAGGCGTAGAGT.................................. | 17 | 2 | 16 | 0.06 | 1 | 0 | 1 | 0 | 0 | 0 |
| ............................................................TTAATCAGGCTCTGA................................................................................. | 15 | 1 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 |
Generated: 04/24/2015 at 10:21 AM