ID:

dsi_12747

 Coordinate:

2l:9938313-9938725 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.9 -13.9 -13.9

Flybase annnotation

five_prime_UTR [2l_9938131_9938850_-]; exon [2l_9938131_9938850_-]

No Repeatable elements found

Sense Strand Reads

#################################################################################################################################################################################################################################################################################################################################################################################################################################################################################################################################
GAGCAAAACATGTGATAGCTTTTTGAAATGCAGTAGCCAGAACCTGCTCGGTTGGAACATTTAGCTTATTGACTTAAACATACCCATATGCACATACATATGTATTAAACAGTGGGCACATATATTCGTGTGGTGCTGATAGTGTAAATGTGTAAAATGTCTGTGGAATTGTAAATATGTTTTTGTTTAAACAAATATGTACATAAATGCACAAAAATCGGTGCATATATGTGCACATGCCCATCATCCATATCTGCATATTTCTGTACATGCATATGTGCTCTAACTACAATACATACCACCATTCGCAAACAGTTTGTCAAAAAAGTGTGTCTACTCGGCGAGATAAAACAAAAAACAGTTGCCAAATCAGTCGCTATGTTAAGTAATTCGAAATTACTGCTCGGTGTTTCTAAAACGGATTTTGATTTTGATTTTCACCCCTCGAAAATCGCCCCCTCAGCCAACGAACCCATTTAATTGCTCGAATTCGTATCGAAATCGCCGTGCGTT
*******************************************************************************************************************************************************************************************************************************************************************************************************************************************........((.((((((((((((((....(((...........((((..((..(((((((...)))))))))..)))).......)))...))))).)))))..)))).)).********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M024
male body		 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M023
head
 GSM343915
embryo
...........................................................................................................................................................................................................................................................................................................................................GTCTACTCGGCGAGATAA.................................................................................................................................................................... 18 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTATCGAAATCGCCGTG.... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGATTTTGATTTTGATTTTCACCC...................................................................... 27 0 1 2.00 2 0 0 0 0 0 0 0 0 2 0 0
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCTTGATTTTCA......................................................................... 16 1 14 1.29 18 0 0 0 0 12 0 0 0 6 0 0
........................................................................................................................................................TAAAATGTCTGTGGAATT....................................................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCGGTGTTTCTAAAACGGATTTTGA..................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGTGTTTCTAAAACG............................................................................................. 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCCCCCTCAGCCAACGAACCCATT.................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
....................TTTTGAAATGCAGTAGCCAGAACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................ATATTCGTGTGGTGCTGATAGG.................................................................................................................................................................................................................................................................................................................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................TGGTGCTGATAGTGTAAATGTGTAAA..................................................................................................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................................................................TTACTGCTCGGTGTTTCTAAAACGGA........................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................ATATATTCGTGTGGTGCTGTT..................................................................................................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATTGCTCGAATTCGTATCGAAAT........... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
....................................................TGGAACATTTAGCTTATTGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................CATGCCCATCATCCATATCTG................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................TTTTGAAATGCAGTAGCCAGAACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..................................AGCCAGAACCTGCTCGGTTGGAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................TATGTGCTCTAACTACAATAC.......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................TATGTACATAAATGCACAAAAATCGGT................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...................................GCCAGAACCTGCTCGGTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................TGGTGCTGATGGTGTAAATGTGT........................................................................................................................................................................................................................................................................................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............TAGCTTTTTGAAATGCAGTAGCCAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................................TTGCCAAATCAGTCGCTATGTT.................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................................................................................................................................................................................TTTGTCAAAAAAGTGTGTCTA................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................................ATCAGTCGCTATGTTAAGT.............................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGTATCGAAATCGCCGTGC... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................ATATATTCGTGTGGTGCTGATA.................................................................................................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TGTACATAAATGCACAAAAATCGGTGCA................................................................................................................................................................................................................................................................................................ 28 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................ATATATTCGTGTGGTGCT........................................................................................................................................................................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................AAAAGTGTGTCTACTCGGCGAGATA..................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
...................................GCCAGAACCTGCTCGGTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................................................................................AAACGGATTTTGATTTTGAT.............................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................CGTGTGGTGCTGATGGTGTA............................................................................................................................................................................................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CAAAAATCGGTGCATATATGT......................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................TATGTATTAAACAGTGGGCA........................................................................................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................TGCTCTAACTACAATACATACC..................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................................................................TTACTGCTCGGTGTTTCTAAAACGGAA.......................................................................................... 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
......................................AGAACCTGCTCGGTTGGAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCTTGATTTTCA......................................................................... 15 1 20 0.65 13 0 0 0 0 11 0 0 0 2 0 0
...............................................................................................................................................................TCTGTGGATTTTTAAATCTGTT............................................................................................................................................................................................................................................................................................................................................ 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1
...............................................................................................................................................................TCTGTGGATTTTTAAATCTGTTT........................................................................................................................................................................................................................................................................................................................................... 23 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTTTGATTTTCA......................................................................... 15 0 6 0.50 3 0 0 0 0 2 0 0 0 1 0 0
.....................................................................................................................................TGCTGATAGTGTGAAAGTGTGA...................................................................................................................................................................................................................................................................................................................................................................... 22 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATTTTGATTTTCA......................................................................... 17 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTTTGATTTTCA......................................................................... 16 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
.........................................................CATTTGGCCTGTTGACTTAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................... 21 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
...................TTTTTGAAATGGAGTAGGCGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 22 3 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAAATCGCCGTG.... 15 1 16 0.19 3 0 0 0 0 2 0 0 0 1 0 0
........................................................................................................................................................................................................................................................................................................TATCACCATTCGAAATCAGTTT................................................................................................................................................................................................... 22 3 6 0.17 1 0 0 0 0 0 0 0 0 0 1 0
.................................................................................................................................GTGGTGCTTATGGTGTAAAC............................................................................................................................................................................................................................................................................................................................................................................ 20 3 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................................................................CGAAGGTACTGCTCGGAGT....................................................................................................... 19 3 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................AATTGTAAATATCTTTTT......................................................................................................................................................................................................................................................................................................................................... 18 1 10 0.10 1 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................TAGTCGGCGAAATAAAAAAAAAA............................................................................................................................................................ 23 3 16 0.06 1 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

CTCGTTTTGTACACTATCGAAAAACTTTACGTCATCGGTCTTGGACGAGCCAACCTTGTAAATCGAATAACTGAATTTGTATGGGTATACGTGTATGTATACATAATTTGTCACCCGTGTATATAAGCACACCACGACTATCACATTTACACATTTTACAGACACCTTAACATTTATACAAAAACAAATTTGTTTATACATGTATTTACGTGTTTTTAGCCACGTATATACACGTGTACGGGTAGTAGGTATAGACGTATAAAGACATGTACGTATACACGAGATTGATGTTATGTATGGTGGTAAGCGTTTGTCAAACAGTTTTTTCACACAGATGAGCCGCTCTATTTTGTTTTTTGTCAACGGTTTAGTCAGCGATACAATTCATTAAGCTTTAATGACGAGCCACAAAGATTTTGCCTAAAACTAAAACTAAAAGTGGGGAGCTTTTAGCGGGGGAGTCGGTTGCTTGGGTAAATTAACGAGCTTAAGCATAGCTTTAGCGGCACGCAA
**********************************************************************........((.((((((((((((((....(((...........((((..((..(((((((...)))))))))..)))).......)))...))))).)))))..)))).)).******************************************************************************************************************************************************************************************************************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M024
male body		 M023
head
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
.....................................................................................................................................................................................................................................................................................CACGAGATGGAGGTTATG.......................................................................................................................................................................................................................... 18 2 4 3.00 12 0 9 3 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CACGAGATGGAGGTTATGT......................................................................................................................................................................................................................... 19 2 1 3.00 3 0 2 0 0 1 0 0 0 0 0
........................CTTTACGTCATCGGTCTTGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................GTACGGGTAGTAGGTATA.................................................................................................................................................................................................................................................................... 18 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................TCACGAGATGGAGGTTATGT......................................................................................................................................................................................................................... 20 3 5 1.20 6 0 1 5 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................GAGGTATCAAGACATGTACTTA.............................................................................................................................................................................................................................................. 22 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................................TTGTCAACGGTTTAGTCAGCG........................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................CACGTGTACGGGTAGTAGGTA...................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................................CGGTTTAGTCAGCGATACA................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................TTTGGTAGTAGGTATAGACGT............................................................................................................................................................................................................................................................... 21 3 2 1.00 2 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................................CAACGGTTTAGTCAGCGATAC.................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGCTTAAGCATAGCTTTA........... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................GTACGGGTAGTAGGTATAGAC................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................GTTATGTATGGTGGTAAGCGT........................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................TATTTTGTTTTTTGTCAA...................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................................TACGGGTAGTAGGTGTAGACG................................................................................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................ACGTGTACGGGTAGTAGGTAT..................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................GAGGTATAAAGAAATGTACGTC.............................................................................................................................................................................................................................................. 22 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTTGCTTGGGTAAATTAACG............................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................ACGTGTACGGGTAGTAGGTA...................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGGAGTCGGTTGCTTGG........................................ 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................ACACGGGTAGTAGGTATAGACG................................................................................................................................................................................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................CGGGTAGATGGTATAGACG................................................................................................................................................................................................................................................................ 19 2 3 0.67 2 0 1 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................................................................................GACGTATTACGACATGTACGTT.............................................................................................................................................................................................................................................. 22 3 2 0.50 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGGAGGCGGTTGCTTGGG....................................... 20 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGGGAGCTTTAATCGGGG....................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................................................................................................................................ACGAGATGGAGGTTATGT......................................................................................................................................................................................................................... 18 2 6 0.33 2 0 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGGGCAGCTTTTAGC........................................................... 18 2 3 0.33 1 0 0 0 0 0 0 0 0 0 1
.............................................................................................................................................................................................................................................ACGGGTAGATGGTATAGAC................................................................................................................................................................................................................................................................. 19 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................GAGGTATAAAGACATGTAAGTT.............................................................................................................................................................................................................................................. 22 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0
..............................GTCAGCGGTCTTGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 15 1 13 0.23 3 0 0 0 0 3 0 0 0 0 0
..............................................................................................................................................................................................................................................CGGGTAGATGGTATAGACGC............................................................................................................................................................................................................................................................... 20 3 5 0.20 1 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................GCACGAGATGGAGGTTATG.......................................................................................................................................................................................................................... 19 3 12 0.17 2 0 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................CCGGGTAGATGGTATAGACG................................................................................................................................................................................................................................................................ 20 3 6 0.17 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................GCGGGTAGATGGTATAGACG................................................................................................................................................................................................................................................................ 20 3 7 0.14 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................GTAGGGGTAGTTTGTATAGA.................................................................................................................................................................................................................................................................. 20 3 7 0.14 1 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................................................................GTCGTAGCTATAGACGTA.............................................................................................................................................................................................................................................................. 18 2 18 0.11 2 0 0 2 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCTTCAGCATAGTTG............. 18 3 20 0.10 2 0 0 0 0 0 0 0 0 2 0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACGAGCTTCAGCATAG................ 19 3 14 0.07 1 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................................................................................................................................................................................TTGATTTTTGTCAACG.................................................................................................................................................... 16 1 18 0.06 1 0 0 0 0 0 0 0 1 0 0
...........................TTTGTCATCGGTCTTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................................AGTAGGTACGGGCGTATAA........................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:9938263-9938775 - dsi_12747 GAGCAAAACATGTGATAGCTTTTTGAAATGCAGTAGCCAGAACCTGCTCGGTTGGA--------ACATTTAG-CTTATTGACTTAAACATACCCATA-TGCACATAC-------ATA----TGTATTAAACAGTGGGCACAT----------ATATTCGTGTGGT---------GCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGAAT----TGTAAATATGTTTTTGTTTAAACA----AATATGTACA------------TAAATGCA--CAAA-AATCGGTGCATATATGTG--------CACATGCCCATC---ATCCATATCTGCATATTTCTGTACATGCATATGTG---------CTCTAACTACAATACATACCACCATT------------------CGCAAACAGTTTGTCAA--AAAAGTGTGT--CTACTCGGCGAGATAAAAC--------------------------------AAAAAACAG------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCGAAATTACTGCTCGGTGTT-TCTAAAACGGATTTTGATTTTGATTTTCACCCCTCGAAAATCGCCCCCTCAGCCAACGA------ACCCA-----------TTTAATT-GC----------------TCGAATTCGTATCGAAATCGCCGTGCGTT
droSec2 scaffold_3:5685567-5686079 - GAGCAAAACATGTGATAGCTTTTTGAAATGCAGTAGCCAGAACCTGCTCGGTTGGA--------ACATTTAG-CTTATTGACTTAAACATACCCATA-TGCACATAC-------ATA----TGTATTAAACAGTGGGCACAT----------ATATTCGTGTGGT---------GCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGAAT----TGTAAATATGTTTTTGTTTAAACA----AATATGTACA------------TAAATGCA--CAAA-AATCGGTGCATATATGTG--------CACATGCCCATC---ATCCATATCTGCATATTTCTGTACATGCATATGTG---------CTCTAACTACAATACATACCACCATT------------------CGCAAACAGTTTGTCAA--AAAAGTGTGT--CTACTCGGCGAGATAAAAC--------------------------------AAAAAACAG------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCGAAATTACTGCTCGGTGTT-TCTAAAACGGATTTTGATTTTGATTTTCACCCCTCGAAAATCGCCCCCTCAGCCAACGA------ACCCA-----------TTTAATT-GC----------------TCGCATTCGTATCGAAATCGCCGTGCGTT
dm3 chr2L:10260387-10260903 - GAGCAAAACATGTGATAGCTTTTTGAAATGCAGTAGCCAGAACCTGCTCGGTTGGA--------ACATTTAG-CTTATTGACTTAAACATACCCATA-TGCACATACATA---CATA----TGTATTAAACAGTGGGCACAT----------ATATTCGTGTGGT---------GCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGAAT----TGTAAATATGTTTTTGTTTAAACA----AATATGTACA------------TAAATGCA--CAAA-AATCGGTGCATATATGTG--------CACATGCCCATC---ATCCATATCTGCATATTTCTGTACATGCATATGTG---------CTCTAACTACAATACATACCACCATT------------------CGCAAACAGTTTGTCAA--AAAAGTGTGT--CTACTCGGCGAGATAAAAC--------------------------------AAAAAACAG------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCGAAATTACTGCTCGGTGTT-TCTAAAACGGATTTTGATTTTGATTTTCACCCCTCGAAAATCGCCCCCTCAGCCAACGA------ACCCA-----------TTTAATT-GC----------------TCGAATTCGTATCGAAATCGCCGTGCGTT
droEre2 scaffold_4929:10866684-10867176 - TAGTAAAACATGTGATAGCTT-TTGAAATGCAGTACCCAGAACCCGCTCGGTTGGA--------ACATTAAG-CTTATTGACTTAAACATACCCATA-TGCACATAC-------ATA----TGCGTGAGACAGTAGACACAT----------ATATTCGTGTGGT---------GCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGAAT----TGTGACTATGTTTTTGTTTAAACA----AATATGTACA------------TAAATGCA--CAAA-AATCGGTGCATATATGTG--------CACATGCCCGTC---ATCCATATCTGCATATTTCTGTACATGCATATGTG---------CTCTAACTACAATACATACCACCATT------------------CGCAAACAGTTTGTCAA--AAAAGTGTGT--CTACTCGGCGAGATAAAAC--------------------------------CAAAAACAG------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCGAAATTACTGCTCGGTGTT-TCTAAAACGGATTGTGATTTTGGTTTTCACCCATCGAAAA-------------------------GCCCA-----------TTTAATT-AC----------------TCGGATTCGAATTGAAATCGCCGTACGTT
droYak3 2L:12934747-12935262 - AAGTAAAACATGTGATAGCTTTTTGAAATGCAGTAGCCAAAACCTGCTCGGTTGGA--------ACATTTAG-CTTATTGACTTAAACATACCCATA-TGCACATAC-------ATA----TGTATTAAACAGTAGGCACAT----------ATATTCGTGTGGT---------GCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGAAT----TGTAAATATGTTTTTGTTTATACA----AATATGTACA------------TAAATGCA--CAAA-AATCGGTGCATATATGTG--------CACATGCCCATCATCATCCATATCTGCATATTTCTGTACATGCATATGTG---------CTCTAACTACAATACATACCACCATT------------------CGCAAACAGTTTGTCAA--AAAAGTGTGT--CTACTCGGCGAGATAAAAC--------------------------------AAAAAACAG------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCGAAATTACTGTTCGGTGTT-TCTAAAACGGATTTTGATTTTGGTTTTCACCCATCGAAAATCGCCAGTTCAGCCAGCGG------GCCCA-----------TTTAATT-GC----------------TCGGATACGAATTAAAATCGCCGTACGTT
droEug1 scf7180000409554:4661740-4662239 + AAGTATAACATGTGATAACTTTTTAAGATGCAGTAAAAAGAACCTGTTCGGTTGGATCCCAAATACATTTAG-CTTATTGACTTAAACATACCCATA-TGCACATACATA---TGTA----TGTATTAAACAGTAGGCACAT------ACATATATTCGTGTGGT---------GCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGAAT----TGTAAATATGTTTTTGTTTAAACA----AATATGTACA------------TAAATGCA--CAAA-AATTGGTGCATATATGTC--------CACATGCCCA------TCCAAATCTACATATTTCTGTACATGCATATGTG---------CTCTAACTACAATACATACCACCATT------------------CGCGAACAGTTTGTCAA--AAAAGTGTGT--CTACTCTGTGAGATAAAAC--------------------------------AA-AAACAG------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCAAAATTACTGTTCAGTGTT-TCAAATACGGTTTTTGATAGT------------TCAAAAATCGCCCCTTCATGCAGTGA------GCCAA-----------TTTAATG-GC----------------TCGAGTT-------------CCGTGCGTT
droBia1 scf7180000301468:388656-389208 - ATGTATAACATGTGATAGCTTTTGGCGATGCAGTAGCGAGAACCTGCTCGGTTGGAGCCCAAATACACTTAG-CTTATTGACTTAAACATACCCATA-TGCACATAC-------ATA----TGTATTAAACAGTAGGCGCACATACATATGTACATTCGTGTGGT---------GCTGATAGTGTAAAAGTGTGTAAAATGTCTGTGGAAC----TGTAAATATGTTTTTGTTTAAAAA----AATATGTACA------------TAAATGCA--CAAA-AATCGCTGCA--------------------------------TCCGCATCTGCATATTTCCGTGCATGCATATGTGCATATGCCCCTCTAACTGCAATACATACCACCATTCGCACTCGCATTCGCACTCGCAAACAGTTTGTGGAGGAAAAGTGTCT--CTACTCGGCGAGATAAACTGAGGCAGGAGCCCGAAACCG--AACAGAAAACAGAAAACAA------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCGAAATTACTGCTCGGTGTT-TCAAATACGGATTTCGATTGT------------CCACAAATCGCCCGTTCGGCCAGTGCACAAACACCGA-----------TTTAGTT-GC---------------CTCGCATC-------------CCATGCGCT
droTak1 scf7180000415667:218324-218802 + ATGTATAACATGTGATAACTTTTTGAAATGCAGTAGCAAGAACCTGCTCGGTGGGAACCCAAATACATTTAG-CTTATTGACTTAAACATACCCATA-TGCACATAC-------ATA----TGTATTAAACAGTAGGCGCAT------ATGTATATTCGTGTGGT---------GCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGAAT----TGTAAATATGTTTTTGTTTAAACA----AATATGTACA------------TAAATGCA--CAAA-AATCGGTGCA--------------------------------TCCATATCTGCATATTTCTGTACATGCATATGTG---------CTCTAACTGCAATACATACTACCATT------------------CGCGGACAGTTCGTCGA--AAAAGTGTGT--CTACTCGGCGAGATAAAAC--------------------------------AAAAAACAG------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCGAAATTACTGTTCGGTGTT-TCTAATACGGATTTTGATTGT------------TCGAAAATCGCCCGTTTATGCAGTGA------ACCAA-----------TTTAATT-GC----------------TCGAATC-------------CCGTGCGTT
droEle1 scf7180000491186:3339912-3340400 - ATGTATAACATGTGATAACTTTTTGAAAAGCAGTAACAAAAACCTGCTCGGTTGGAACCCAAATACATTTAGCCTTATTGACTTAAACATACCCATA-TGAACATAC-------ATA----TGTATTAAACAGTAGGCCCAT----------ATATTCGTGTGGT---------GCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGAAT----TGTAAATATGTTTTTGTTTAAACA----AATATGTACA------------TAAATGCA--CCAA-AATCGGTGCATATATGTG--------CACATGCCCA------TCCATATCTGCATATTTCTGTACATGCATATGTG---------CGCTAACTACAATACATACCACCATT------------------CGCAAACAGTTTGTCAA--AAAAGTGTGT--CTA-----CAAGATAAAAC--------------------------------AAAAAACAG------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCGAAATTACTGTTCGGTGTT-TCTAATAAGGATTTTGATGGT------------TTAAAAATCGCCAGTTTATGCAGTGA------AGCAA-----------TTTAATT-GC----------------TCGAATT-------------CCGTGCACT
droRho1 scf7180000762898:43276-43763 - ATGTGTAACATGTGATAATTTTTTGAAATGCAGTAACAAAAACCTGCTCGGTTGGAACCCAAATACATTTAG-CTTATTGACTTAAGCATACCCATA-TGAACATAC-------ATA----TGTATTAAACAGTAGGCCCAT----------ATATTCGTGTGGT---------GCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGAAT----TGTAAATATGTTTTTGTTTAAAGA----AATATGTACA------------TAAATGCA--CAAA-AATCGGTGCATATATGTG--------CACATGCCTA------TCCATATCTACATATTTCTGTACATGCATATGTG---------CACTAACTACAATACATACCACCATT------------------CGCAAACAGTTTGTCAA--AAAAGTGTGT--CTA-----CAAGATAAAAC--------------------------------AAAAAACAG------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCGAAATTACTGTTCGGTGTT-TCTAATAAGGATTTTGATTGT------------TTAAAAACCGCCAGTTCATGCAGTGA------AGCAA-----------CTTAATT-GC----------------TCGAATT-------------CCGTGCACT
droFic1 scf7180000453838:490065-490573 - ATGTACAACATGTGATAACTTTTTGAAATGCAGTAACAAAAACTTGCTCGGTTGGAACCCAAATACATTTAG-CTTATTGACTTAAACATACCCATA-TGCACATAC-------ATA----TGTATTAAACAGTAGGCACAT------ATGTATATTCGTGTGGT---------GCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGAAT----TGTAAATATGTTTTTGTTTGAACA----AATATGTACA------------TAAATGCA--CAAA-AATCGGTGCATATATGTG--------CACATGCCCA------TCCATATCTGCATATTTCTGTACATGCATATGTG---------CTCTAACTACAATACATACCACCATT------------------CGCAAACAGTTTGTCAA--AAAAGTGTGT--CTA-----CAAGATAAAACAAAA-AGAGAAAAAA--------------AACAAAAAACAG------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCGAAATTACTGTTCGGTGTT-TCTAATAAGGATTTTGATTGT------------TTAAAAACCGCCAGTTCATGCAGTGA------ACCTA-----------TTTAATT-GC----------------TCGAATT-------------CCGTGCATT
droKik1 scf7180000302472:3076848-3077360 + ATGTATAACATGTGATAACTTTTTAAGATGCAGTAACAGAAACTCGTTCGGTTGGAGCCCAAATACATTTAG-CTTATTGACTTAAACAGACCCAC-----ACATACATAGCATATA----TGTATTAAAGAGTAGGCCCAT----------ATATTCGTGTGGTGCCTGTGCTGCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGATTCTGCTGTAAATATGTTTTTATTTAAACA----AATATGTACA------------TAAATGCA--CGAAAAATCGGTGCATATATGCG--------CACATGCCCA------T---------------------------TGTGTG---------CTCTAACTACAATACATACCACCATT------------------CGCAAACAGTTTGTCCA--AAAAGTGTGTGTCTACT--ACAAGATAAAACAAAA-CGAAAAGGA-------------------AAACACAGTTGCTGTTGCCAAAATCATGTCGCTATGTTAAGTAATTTCGA--TTG--ATTCGGTGTTTTCTAACAAGGACTTGGATTGT------------TTAAAA----------------GCGA------GCCCAGTTCCGTTCGGTTTAATCGGCTCACCAATTAAATTCACCGAATT-------------CCGTGCATT
droAna3 scaffold_12916:14091999-14092216 - ATATAAAAAATGTGATAACTC-TTGAAATGCAGTAACAAAAACTTGTTCGGTTGA-ACCTGAATACATTTAA-CTTATTGACTG--GCAT-----------ACATAC-------ATA----TGTATTAAACAGTAGGCCCAT----------ATATTCGTGTGCT---------GCTGATAGTGTAAA--TGTGTAAAATGTCAGTGAATTT---TGTAAATATGTTTTTAATTGTTAA----AATATGCACA------------TAAACCCA---AGA-AATTAGTGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396535:1047449-1047959 - ATATAAAAAATGTGATAACTC-TTGAAATGCAGTAACAAAAACTTGTTCGGTTGA-ACCTGAATACATTTAA-CTTATTGACTTAAACATACCCATA-TGCACATAC-------ATA----TGTATTAAACAGTAGGCCCAT----------ATATTCGTGTGCT---------GCTGATAGTGTAAA--TGTGTAAAATGTCAGTGGATTT---TGTAAATATGTTTTTAATTGTTAA----AATATGCACA------------TAAACGCA---AGA-AATTAGTGCATAGATGCG--------CACATGCCCA------TGCATATCTGCATATTTCTGTACATGCATATGTG---------CTCCAACTACAATACATACCCCCATT------------------CGCAAACAGTTTGTCAA--GAAAGTGTGT--CTA-----CAATATAAAACAAAA-AGGAAAAAAAAACAAGCAAAAAAAAAAAGAAAACGG------TTGCC-AAATCATGTCGCTATGTTAAGTAATTTCGA------TATTCAGTGTT-TCTAATTAGGATT-TGATTGA------------TTAAGAATCAGAAGTTCACGCAGC-A------GCCAA-----------TTTAATT-GT----------------TGAAATT-------------CCGTGCATT
dp5 Unknown_group_3:109432-109750 + GTAAATTGTATGTGATAACCACTTAAAATACAGTTAAAAATCCAGACTCCGTTTGA--------AAGTTCTA-CATACAGAATTTTATGTATGTGCAGTGTATGTAC-------ATATGTATGTATATATATATATATACAT----------ATACTTA---ACA---------GTTGATAGCTGTAT--TGTGTGCAATATCTATGGATTT---TGTGAATCTGTTTTTGTTTATGCATACAAATGTATGTA------C-----TAAATGAA--CATACAATAAATGCAAATATTTA----------------------------TTTATACATATATATGATTAGGTATAT-CA---------TATTAACTGTTATAGACA----AATT------------------TGCTAACTGTTTAATGAG-AAAAGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_1:1411525-1411841 + GTAAATTGTATGTGATAACCACTTAAAATACAGTTAAAAATCCAGACTCCGTTTGA--------AAGTTCTA-CATACAGAATTTTATGTATGTGTAGTGTATGTAC-------ATA----TGTATGTATATATATATATAT----------ATATACTTA-ACA---------GTTGATAGCTGTAT--TGTGTGCAATATCTATGGATTT---TGTGAATCTGTTTTTGTTTATGCATACAAATGTATGTA------C-----TAAATGAA--CATACAATAAATGCAAATATTTA----------------------------TTTATACATATATATGATTAGGTATAT-CA---------TATTAACTGTTATAGACA----AATT------------------TGCTAACTGTTTAATGAG-AAAAGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004909:9961626-9961704 + TA-------------------------------------------------------------------------------------------TATA-TGTATAAAT-------ATA----TATA------------------------------------------------------------------------------------------TATACATATGTTCTTATATATAGA----TAGATATATA------------TATATGTA--TA-----------TATATATGTG--------CA-----------------------------------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13042:2160233-2160441 + TTG--------------------------------------------------------------------------TTGTTGTATGTACATATGTA-TGTATATGC-------ATA----TGTATGTATATACATATGTAT----------GTATATGCAT---------------------ATGTA--TGTATAT-ACATATGTATGTA----TATACATATGTATGTATATACATA----TGTATGTATA------------TACATATG--TATG-TATATACATATGTATGTG--------TGTGTGTA--------TGTATATATGTATGCGTGTGTGTGTGTGTGTGTG---------TG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------GTGTGTGTG
droMoj3 scaffold_6498:3136940-3137146 - ACGTAA----------------------------------------------------------------------------CTATATATACATATA-TATATATAT-------ATA----TATATATATATATATATATAT----------ATATATATATA------------------------------------------------------------TATATATATATATATA----TATATATATATATATATATATATA--TATATATA---TATATATATATGTACTTATATGTGCATG---------T---ATATACATATATACACTCACGCGTATATATATATG---------CTCCTATCCGCTTATATGCATACATA------------------CGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14978:335469-335623 - -----------------------------------------------------------------------------------TATACATACACACA-TATATATAT-------ATA----TGTATATATACATACACACAT----------ATATATATATA----------------------------------------------TA----TATATATATATATATATATGTATG----TATATATATA----------CATA--TATATACA---AATAAATATATATATGTA--------TGTATATACATG---TCCTGTATGTGTGCAATTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GAGCAAAACATGTGATAGCTTTTTGAAATGCAGTAGCCAGAACCTGCTCGGTTGGA--------ACATTTAG-CTTATTGACTTAAACATACCCATA-TGCACATAC-------ATA----TGTATTAAACAGTGGGCACAT----------ATATTCGTGTGGT---------GCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGAAT----TGTAAATATGTTTTTGTTTAAACA----AATATGTACA------------TAAATGCA--CAAA-AATCGGTGCATATATGTG--------CACATGCCCATC---ATCCATATCTGCATATTTCTGTACATGCATATGTG---------CTCTAACTACAATACATACCACCATT------------------CGCAAACAGTTTGTCAA--AAAAGTGTGT--CTACTCGGCGAGATAAAAC--------------------------------AAAAAACAG------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCGAAATTACTGCTCGGTGTT-TCTAAAACGGATTTTGATTTTGATTTTCACCCCTCGAAAATCGCCCCCTCAGCCAACGA------ACCCA-----------TTTAATT-GC----------------TCGAATTCGTATCGAAATCGCCGTGCGTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--CTACTCGGCGAGATAA................................................................................................................................................................................................................................................1813.00300300000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTATCGAAATCGCCGTG....2012.00200000000000002000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGATTTTGATTTTGATTTTCACCC........................................................................................................2712.00200000000020000000
..................................................................................................................................................................................................TAAAATGTCTGTGGAAT----T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCGGTGTT-TCTAAAACGGATTTTGA.......................................................................................................................2811.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGTGTT-TCTAAAACG...............................................................................................................................1811.00100001000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCCCCCTCAGCCAACGA------ACCCA-----------TT.....................................................2711.00100000010000000000
....................TTTTGAAATGCAGTAGCCAGAACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
........................................................................................................................................................ATATTCGTGTGGT---------GCTGATAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.................................................................................................................................................................TGGT---------GCTGATAGTGTAAA--TGTGTAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTGCTCGGTGTT-TCTAAAACGGA.............................................................................................................................2611.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATT-GC----------------TCGAATTCGTATCGAAAT...........2611.00100000000001000000
....................................................TGGA--------ACATTTAG-CTTATTGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
....................................................................................................................................................................................................................................................................................................................CATGCCCATC---ATCCATATCTG............................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
....................TTTTGAAATGCAGTAGCCAGAACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000100000000
..................................AGCCAGAACCTGCTCGGTTGGA--------AC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TATGTG---------CTCTAACTACAATAC............................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
.....................................................................................................................................................................................................................................................TATGTACA------------TAAATGCA--CAAA-AATCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
...................................GCCAGAACCTGCTCGGTTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
...............TAGCTTTTTGAAATGCAGTAGCCAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCC-AAATCA-GTCGCTATGTT......................................................................................................................................................................2211.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTCAA--AAAAGTGTGT--CTA.............................................................................................................................................................................................................................................................2111.00100000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCA-GTCGCTATGTTAAGT..................................................................................................................................................................1911.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGTATCGAAATCGCCGTGC...2211.00101000000000000000
............................................................................................................................................AT----------ATATTCGTGTGGT---------GCTGATA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.......................................................................................................................................................................................................................................................TGTACA------------TAAATGCA--CAAA-AATCGGTGCA......................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
............................................................................................................................................AT----------ATATTCGTGTGGT---------GCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTGTGT--CTACTCGGCGAGATA.................................................................................................................................................................................................................................................2511.00100000000001000000
...................................GCCAGAACCTGCTCGGTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGGATTTTGATTTTGAT................................................................................................................2011.00100100000000000000
...................................................................................................................................................................................................................................................................................CAAA-AATCGGTGCATATATGT...............................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
...................................................................................................................TA----TGTATTAAACAGTGGGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
..................................................................................................................................................................................................................................................................................................................................................................TG---------CTCTAACTACAATACATACC.......................................................................................................................................................................................................................................................................................................................2211.00100001000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTGCTCGGTGTT-TCTAAAACGGAA............................................................................................................................2711.00100000001000000000
......................................AGAACCTGCTCGGTTGGA--------ACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTTTGATTTTCA...........................................................................................................1560.50300000000210000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATTTTGATTTTCA...........................................................................................................1740.25100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTTTGATTTTCA...........................................................................................................1640.25100000001000000000
droSec2
GAGCAAAACATGTGATAGCTTTTTGAAATGCAGTAGCCAGAACCTGCTCGGTTGGA--------ACATTTAG-CTTATTGACTTAAACATACCCATA-TGCACATAC-------ATA----TGTATTAAACAGTGGGCACAT----------ATATTCGTGTGGT---------GCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGAAT----TGTAAATATGTTTTTGTTTAAACA----AATATGTACA------------TAAATGCA--CAAA-AATCGGTGCATATATGTG--------CACATGCCCATC---ATCCATATCTGCATATTTCTGTACATGCATATGTG---------CTCTAACTACAATACATACCACCATT------------------CGCAAACAGTTTGTCAA--AAAAGTGTGT--CTACTCGGCGAGATAAAAC--------------------------------AAAAAACAG------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCGAAATTACTGCTCGGTGTT-TCTAAAACGGATTTTGATTTTGATTTTCACCCCTCGAAAATCGCCCCCTCAGCCAACGA------ACCCA-----------TTTAATT-GC----------------TCGCATTCGTATCGAAATCGCCGTGCGTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCC-AAATCA-GTCGCTATGT.......................................................................................................................................................................1911.0010001
.........................................................................................................................................................................................AAA--TGTGTAAAATGTCTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
................................................................................................................................................................................................................................................................................A--CAAA-AATCGGTGCATATATGT...............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
...................................................................................................................................................................GT---------GCTGATAGTGTAAA--TG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--------------------------------AAAAAACAG------TTGCC-AAATCA-GTCG.............................................................................................................................................................................2511.0010010
............................................................................................................................................AT----------ATATTCGTGTGGT---------GCTGATAGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
dm3
GAGCAAAACATGTGATAGCTTTTTGAAATGCAGTAGCCAGAACCTGCTCGGTTGGA--------ACATTTAG-CTTATTGACTTAAACATACCCATA-TGCACATACATA---CATA----TGTATTAAACAGTGGGCACAT----------ATATTCGTGTGGT---------GCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGAAT----TGTAAATATGTTTTTGTTTAAACA----AATATGTACA------------TAAATGCA--CAAA-AATCGGTGCATATATGTG--------CACATGCCCATC---ATCCATATCTGCATATTTCTGTACATGCATATGTG---------CTCTAACTACAATACATACCACCATT------------------CGCAAACAGTTTGTCAA--AAAAGTGTGT--CTACTCGGCGAGATAAAAC--------------------------------AAAAAACAG------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCGAAATTACTGCTCGGTGTT-TCTAAAACGGATTTTGATTTTGATTTTCACCCCTCGAAAATCGCCCCCTCAGCCAACGA------ACCCA-----------TTTAATT-GC----------------TCGAATTCGTATCGAAATCGCCGTGCGTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGA------ACCCA-----------TTTAATT-GC----------------TCGA.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCGGTGTT-TCTAAAACGG..............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGATTTTGATTTTGATTTTCACC.........................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGCTCGGTGTT-TCTAA...................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGTGTT-TCTAAAACGGATTTTGATTT....................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TGCCCATC---ATCCATATCTG............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................AA--TGTGTAAAATGTCTGTGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................GTGTGGT---------GCTGATAGTGTAAA--TGTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGT--CTACTCGGCGAGAT..................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................................................TGTGGAAT----TGTAAATATGTTTTTGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACGGATTTTGATTTTGAT................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGTGT--CTACTCGGCGAGATA.................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................CGTGTGGT---------GCTGATAGTGTAAA--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................CCATA-TGCACATACATA---CATA----...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TAGTAAAACATGTGATAGCTT-TTGAAATGCAGTACCCAGAACCCGCTCGGTTGGA--------ACATTAAG-CTTATTGACTTAAACATACCCATA-TGCACATAC-------ATA----TGCGTGAGACAGTAGACACAT----------ATATTCGTGTGGT---------GCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGAAT----TGTGACTATGTTTTTGTTTAAACA----AATATGTACA------------TAAATGCA--CAAA-AATCGGTGCATATATGTG--------CACATGCCCGTC---ATCCATATCTGCATATTTCTGTACATGCATATGTG---------CTCTAACTACAATACATACCACCATT------------------CGCAAACAGTTTGTCAA--AAAAGTGTGT--CTACTCGGCGAGATAAAAC--------------------------------CAAAAACAG------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCGAAATTACTGCTCGGTGTT-TCTAAAACGGATTGTGATTTTGGTTTTCACCCATCGAAAA-------------------------GCCCA-----------TTTAATT-AC----------------TCGGATTCGAATTGAAATCGCCGTACGTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................A----TGCGTGAGACAGTAGACAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000020
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGT--CTACTCGGCGAGATAAAAC--------------------------------C............................................................................................................................................................................................................2411.0010100000
.....................................................................................................................................................................................................AATGTCTGTGGAAT----TGTGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACGGATTGTGATTTTGGT................................................................................................................2111.0011000000
...............................................................................................................................................................................................GTGTAAAATGTCTGTGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCACCCATCGAAAA-------------------------GCCC...................................................................2011.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-..............................................................................................................................................................2911.0011000000
..................................................................................................TGCACATAC-------ATA----TGCGTGAGACAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT-TCGAAATTACTGCTCGGTGTT-........................................................................................................................................2411.0011000000
.....................................................................................................................................................................................................................................................................................................................ATGCCCGTC---ATCCATATCTGC...........................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................TACAATACATACCACCATT------------------CGCAAACAG......................................................................................................................................................................................................................................................................................2811.0011000000
...................................................................................................GCACATAC-------ATA----TGCGTGAGACAGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCCATCGAAAA-------------------------GCCCA-----------TT.....................................................2111.0011000000
...................................................................................................................................................................................................AAAATGTCTGTGGAAT----TGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CAA--AAAAGTGTGT--CTACTCGGCGAG....................................................................................................................................................................................................................................................2511.0010000100
droYak3
AAGTAAAACATGTGATAGCTTTTTGAAATGCAGTAGCCAAAACCTGCTCGGTTGGA--------ACATTTAG-CTTATTGACTTAAACATACCCATA-TGCACATAC-------ATA----TGTATTAAACAGTAGGCACAT----------ATATTCGTGTGGT---------GCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGAAT----TGTAAATATGTTTTTGTTTATACA----AATATGTACA------------TAAATGCA--CAAA-AATCGGTGCATATATGTG--------CACATGCCCATCATCATCCATATCTGCATATTTCTGTACATGCATATGTG---------CTCTAACTACAATACATACCACCATT------------------CGCAAACAGTTTGTCAA--AAAAGTGTGT--CTACTCGGCGAGATAAAAC--------------------------------AAAAAACAG------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCGAAATTACTGTTCGGTGTT-TCTAAAACGGATTTTGATTTTGGTTTTCACCCATCGAAAATCGCCAGTTCAGCCAGCGG------GCCCA-----------TTTAATT-GC----------------TCGGATACGAATTAAAATCGCCGTACGTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................GTAAA--TGTGTAAAATGTCTGTGGAAT----T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2715.00500000000005
............................................................................................................................................AT----------ATATTCGTGTGGT---------GCTGATAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000020000
...............................................................................................................................................................................................................................................................................................................................................................ATGTG---------CTCTAACTACAATACA...........................................................................................................................................................................................................................................................................................................................2111.00110000000000
............................................................................................................................................AT----------ATATTCGTGTGGT---------GCTGATAGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
..............................................................................................................................................................................GCTGATAGTGTAAA--TGTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
..............................................................................................................................................................................GCTGATAGTGTAAA--TGTGTAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.................................................................................................................................................................................................GTAAAATGTCTGTGGAAT----TGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT-TCTAAAACGGATTTTGATTTTGGT................................................................................................................2711.00101000000000
........................................................................................................................................................ATATTCGTGTGGT---------GCTGATAGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
...............................................................................................................................................................................................GTGTAAAATGTCTGTGGAAT----T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAAATCGCCGTACGTT1911.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCA-GTCGCTATGTTAAGT..................................................................................................................................................................2011.00100000010000
droEug1
AAGTATAACATGTGATAACTTTTTAAGATGCAGTAAAAAGAACCTGTTCGGTTGGATCCCAAATACATTTAG-CTTATTGACTTAAACATACCCATA-TGCACATACATA---TGTA----TGTATTAAACAGTAGGCACAT------ACATATATTCGTGTGGT---------GCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGAAT----TGTAAATATGTTTTTGTTTAAACA----AATATGTACA------------TAAATGCA--CAAA-AATTGGTGCATATATGTC--------CACATGCCCA------TCCAAATCTACATATTTCTGTACATGCATATGTG---------CTCTAACTACAATACATACCACCATT------------------CGCGAACAGTTTGTCAA--AAAAGTGTGT--CTACTCTGTGAGATAAAAC--------------------------------AA-AAACAG------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCAAAATTACTGTTCAGTGTT-TCAAATACGGTTTTTGATAGT------------TCAAAAATCGCCCCTTCATGCAGTGA------GCCAA-----------TTTAATG-GC----------------TCGAGTT-------------CCGTGCGTTSizeHit CountTotal NormTotal
No Reads
droBia1
ATGTATAACATGTGATAGCTTTTGGCGATGCAGTAGCGAGAACCTGCTCGGTTGGAGCCCAAATACACTTAG-CTTATTGACTTAAACATACCCATA-TGCACATAC-------ATA----TGTATTAAACAGTAGGCGCACATACATATGTACATTCGTGTGGT---------GCTGATAGTGTAAAAGTGTGTAAAATGTCTGTGGAAC----TGTAAATATGTTTTTGTTTAAAAA----AATATGTACA------------TAAATGCA--CAAA-AATCGCTGCA--------------------------------TCCGCATCTGCATATTTCCGTGCATGCATATGTGCATATGCCCCTCTAACTGCAATACATACCACCATTCGCACTCGCATTCGCACTCGCAAACAGTTTGTGGAGGAAAAGTGTCT--CTACTCGGCGAGATAAACTGAGGCAGGAGCCCGAAACCG--AACAGAAAACAGAAAACAA------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCGAAATTACTGCTCGGTGTT-TCAAATACGGATTTCGATTGT------------CCACAAATCGCCCGTTCGGCCAGTGCACAAACACCGA-----------TTTAGTT-GC---------------CTCGCATC-------------CCATGCGCTSizeHit CountTotal NormTotal
No Reads
droTak1
ATGTATAACATGTGATAACTTTTTGAAATGCAGTAGCAAGAACCTGCTCGGTGGGAACCCAAATACATTTAG-CTTATTGACTTAAACATACCCATA-TGCACATAC-------ATA----TGTATTAAACAGTAGGCGCAT------ATGTATATTCGTGTGGT---------GCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGAAT----TGTAAATATGTTTTTGTTTAAACA----AATATGTACA------------TAAATGCA--CAAA-AATCGGTGCA--------------------------------TCCATATCTGCATATTTCTGTACATGCATATGTG---------CTCTAACTGCAATACATACTACCATT------------------CGCGGACAGTTCGTCGA--AAAAGTGTGT--CTACTCGGCGAGATAAAAC--------------------------------AAAAAACAG------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCGAAATTACTGTTCGGTGTT-TCTAATACGGATTTTGATTGT------------TCGAAAATCGCCCGTTTATGCAGTGA------ACCAA-----------TTTAATT-GC----------------TCGAATC-------------CCGTGCGTTSizeHit CountTotal NormTotal
No Reads
droEle1
ATGTATAACATGTGATAACTTTTTGAAAAGCAGTAACAAAAACCTGCTCGGTTGGAACCCAAATACATTTAGCCTTATTGACTTAAACATACCCATA-TGAACATAC-------ATA----TGTATTAAACAGTAGGCCCAT----------ATATTCGTGTGGT---------GCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGAAT----TGTAAATATGTTTTTGTTTAAACA----AATATGTACA------------TAAATGCA--CCAA-AATCGGTGCATATATGTG--------CACATGCCCA------TCCATATCTGCATATTTCTGTACATGCATATGTG---------CGCTAACTACAATACATACCACCATT------------------CGCAAACAGTTTGTCAA--AAAAGTGTGT--CTA-----CAAGATAAAAC--------------------------------AAAAAACAG------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCGAAATTACTGTTCGGTGTT-TCTAATAAGGATTTTGATGGT------------TTAAAAATCGCCAGTTTATGCAGTGA------AGCAA-----------TTTAATT-GC----------------TCGAATT-------------CCGTGCACTSizeHit CountTotal NormTotal
No Reads
droRho1
ATGTGTAACATGTGATAATTTTTTGAAATGCAGTAACAAAAACCTGCTCGGTTGGAACCCAAATACATTTAG-CTTATTGACTTAAGCATACCCATA-TGAACATAC-------ATA----TGTATTAAACAGTAGGCCCAT----------ATATTCGTGTGGT---------GCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGAAT----TGTAAATATGTTTTTGTTTAAAGA----AATATGTACA------------TAAATGCA--CAAA-AATCGGTGCATATATGTG--------CACATGCCTA------TCCATATCTACATATTTCTGTACATGCATATGTG---------CACTAACTACAATACATACCACCATT------------------CGCAAACAGTTTGTCAA--AAAAGTGTGT--CTA-----CAAGATAAAAC--------------------------------AAAAAACAG------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCGAAATTACTGTTCGGTGTT-TCTAATAAGGATTTTGATTGT------------TTAAAAACCGCCAGTTCATGCAGTGA------AGCAA-----------CTTAATT-GC----------------TCGAATT-------------CCGTGCACTSizeHit CountTotal NormTotal
No Reads
droFic1
ATGTACAACATGTGATAACTTTTTGAAATGCAGTAACAAAAACTTGCTCGGTTGGAACCCAAATACATTTAG-CTTATTGACTTAAACATACCCATA-TGCACATAC-------ATA----TGTATTAAACAGTAGGCACAT------ATGTATATTCGTGTGGT---------GCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGAAT----TGTAAATATGTTTTTGTTTGAACA----AATATGTACA------------TAAATGCA--CAAA-AATCGGTGCATATATGTG--------CACATGCCCA------TCCATATCTGCATATTTCTGTACATGCATATGTG---------CTCTAACTACAATACATACCACCATT------------------CGCAAACAGTTTGTCAA--AAAAGTGTGT--CTA-----CAAGATAAAACAAAA-AGAGAAAAAA--------------AACAAAAAACAG------TTGCC-AAATCA-GTCGCTATGTTAAGTAAT-TCGAAATTACTGTTCGGTGTT-TCTAATAAGGATTTTGATTGT------------TTAAAAACCGCCAGTTCATGCAGTGA------ACCTA-----------TTTAATT-GC----------------TCGAATT-------------CCGTGCATTSizeHit CountTotal NormTotal
No Reads
droKik1
ATGTATAACATGTGATAACTTTTTAAGATGCAGTAACAGAAACTCGTTCGGTTGGAGCCCAAATACATTTAG-CTTATTGACTTAAACAGACCCAC-----ACATACATAGCATATA----TGTATTAAAGAGTAGGCCCAT----------ATATTCGTGTGGTGCCTGTGCTGCTGATAGTGTAAA--TGTGTAAAATGTCTGTGGATTCTGCTGTAAATATGTTTTTATTTAAACA----AATATGTACA------------TAAATGCA--CGAAAAATCGGTGCATATATGCG--------CACATGCCCA------T---------------------------TGTGTG---------CTCTAACTACAATACATACCACCATT------------------CGCAAACAGTTTGTCCA--AAAAGTGTGTGTCTACT--ACAAGATAAAACAAAA-CGAAAAGGA-------------------AAACACAGTTGCTGTTGCCAAAATCATGTCGCTATGTTAAGTAATTTCGA--TTG--ATTCGGTGTTTTCTAACAAGGACTTGGATTGT------------TTAAAA----------------GCGA------GCCCAGTTCCGTTCGGTTTAATCGGCTCACCAATTAAATTCACCGAATT-------------CCGTGCATTSizeHit CountTotal NormTotal
No Reads
droAna3
ATATAAAAAATGTGATAACTC-TTGAAATGCAGTAACAAAAACTTGTTCGGTTGA-ACCTGAATACATTTAA-CTTATTGACTG--GCAT-----------ACATAC-------ATA----TGTATTAAACAGTAGGCCCAT----------ATATTCGTGTGCT---------GCTGATAGTGTAAA--TGTGTAAAATGTCAGTGAATTT---TGTAAATATGTTTTTAATTGTTAA----AATATGCACA------------TAAACCCA---AGA-AATTAGTGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................AT----------ATATTCGTGTGCT---------GCTGATAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
........AATGTGATAACTC-TTGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
..................................................................ATTTAA-CTTATTGACTG--GC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
........AATGTGATAACTC-TTGAAATGCAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
............................................................................ATTGACTG--GCAT-----------ACATAC-------ATA----TGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
droBip1
ATATAAAAAATGTGATAACTC-TTGAAATGCAGTAACAAAAACTTGTTCGGTTGA-ACCTGAATACATTTAA-CTTATTGACTTAAACATACCCATA-TGCACATAC-------ATA----TGTATTAAACAGTAGGCCCAT----------ATATTCGTGTGCT---------GCTGATAGTGTAAA--TGTGTAAAATGTCAGTGGATTT---TGTAAATATGTTTTTAATTGTTAA----AATATGCACA------------TAAACGCA---AGA-AATTAGTGCATAGATGCG--------CACATGCCCA------TGCATATCTGCATATTTCTGTACATGCATATGTG---------CTCCAACTACAATACATACCCCCATT------------------CGCAAACAGTTTGTCAA--GAAAGTGTGT--CTA-----CAATATAAAACAAAA-AGGAAAAAAAAACAAGCAAAAAAAAAAAGAAAACGG------TTGCC-AAATCATGTCGCTATGTTAAGTAATTTCGA------TATTCAGTGTT-TCTAATTAGGATT-TGATTGA------------TTAAGAATCAGAAGTTCACGCAGC-A------GCCAA-----------TTTAATT-GT----------------TGAAATT-------------CCGTGCATTSizeHit CountTotal NormTotal
No Reads
dp5
GTAAATTGTATGTGATAACCACTTAAAATACAGTTAAAAATCCAGACTCCGTTTGA--------AAGTTCTA-CATACAGAATTTTATGTATGTGCAGTGTATGTAC-------ATATGTATGTATATATATATATATACAT----------ATACTTA---ACA---------GTTGATAGCTGTAT--TGTGTGCAATATCTATGGATTT---TGTGAATCTGTTTTTGTTTATGCATACAAATGTATGTA------C-----TAAATGAA--CATACAATAAATGCAAATATTTA----------------------------TTTATACATATATATGATTAGGTATAT-CA---------TATTAACTGTTATAGACA----AATT------------------TGCTAACTGTTTAATGAG-AAAAGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................TACAGAATTTTATGTATGTGCAGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
......................................................................................................................................ATATACAT----------ATACTTA---ACA---------GTTGATAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
.......................................................................................................................................................................................................................TGTGAATCTGTTTTTGTTTATGCATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.........................................................................................................................................................................................................................................................TGTA------C-----TAAATGAA--CATACAATAAATG........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000100
..............................................................................................................................................................................GTTGATAGCTGTAT--TGTGTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
GTAAATTGTATGTGATAACCACTTAAAATACAGTTAAAAATCCAGACTCCGTTTGA--------AAGTTCTA-CATACAGAATTTTATGTATGTGTAGTGTATGTAC-------ATA----TGTATGTATATATATATATAT----------ATATACTTA-ACA---------GTTGATAGCTGTAT--TGTGTGCAATATCTATGGATTT---TGTGAATCTGTTTTTGTTTATGCATACAAATGTATGTA------C-----TAAATGAA--CATACAATAAATGCAAATATTTA----------------------------TTTATACATATATATGATTAGGTATAT-CA---------TATTAACTGTTATAGACA----AATT------------------TGCTAACTGTTTAATGAG-AAAAGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................GTGTGCAATATCTATGGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003300000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TGCTAACTGTTTAATGAG-AGG.........................................................................................................................................................................................................................................................................2111.001000100
............................TACAGTTAAAAATCCAGACTCCGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
...................................................................................................................................................................................................GCAATATCTATGGATTT---TGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.................................TTAAAAATCCAGACTCCGTTTGA--------AAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
droWil2
TA-------------------------------------------------------------------------------------------TATA-TGTATAAAT-------ATA----TATA------------------------------------------------------------------------------------------TATACATATGTTCTTATATATAGA----TAGATATATA------------TATATGTA--TA-----------TATATATGTG--------CA-----------------------------------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
TTG--------------------------------------------------------------------------TTGTTGTATGTACATATGTA-TGTATATGC-------ATA----TGTATGTATATACATATGTAT----------GTATATGCAT---------------------ATGTA--TGTATAT-ACATATGTATGTA----TATACATATGTATGTATATACATA----TGTATGTATA------------TACATATG--TATG-TATATACATATGTATGTG--------TGTGTGTA--------TGTATATATGTATGCGTGTGTGTGTGTGTGTGTG---------TG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------GTGTGTGTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................ATATACATATGTATGTG--------TGTG..................................................................................................................................................................................................................................................................................................................................................................................................2130.331010000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TATGTATGTG--------TGTGTGTA--------TGT...................................................................................................................................................................................................................................................................................................................................................................................21200.306000000000000000000000000000400000000200000000000000000000000000
......................................................................................................TATGC-------ATA----TGTATGTATATACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.251001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................TATGCAT---------------------ATGTA--TGTATAT-ACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.251001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TAT----------GTATATGCAT---------------------ATGTA--TGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.202000000000000000000000000010000000000000100000000000000000000000
................................................................................................................................................................................................................................................................................................TATGTATGTG--------TGTGTGTA--------TG....................................................................................................................................................................................................................................................................................................................................................................................20200.204000000000020000000000000001000000000100000000000000000000000000
...............................................................................................TA-TGTATATGC-------ATA----TGTATGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.202000000000000000000000000010000000000000100000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................ATATATGTATGCGTGTGTG................................................................................................................................................................................................................................................................................................................................................................1980.131001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................AT-ACATATGTATGTA----TATACAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22110.091000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................................................A------------TACATATG--TATG-TATATACAT.......................................................................................................................................................................................................................................................................................................................................................................................................................22110.091000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................ATACATATGTATGTATATACAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22110.091000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................................ATACATA----TGTATGTATA------------TACAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................22110.091000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TACATATGTATGTG--------TGTGTGT...............................................................................................................................................................................................................................................................................................................................................................................................21120.081000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................................AT----------GTATATGCAT---------------------ATGTA--TG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.081010000000000000000000000000000000000000000000000000000000000000
................................................................................................A-TGTATATGC-------ATA----TGTATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.081010000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................ATATGTATGCGTGTGTGTG..............................................................................................................................................................................................................................................................................................................................................................19140.071000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................ATATGTATGTG--------TGTGTGTA--------......................................................................................................................................................................................................................................................................................................................................................................................19180.061000000000000000000000000000000000000000000000000000000000000010
...................................................................................TATGTACATATGTA-TGTATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTG---------TG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------GTGTGTGT.21200.051000001000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GTG--------TGTGTGTA--------TGTATATAT.............................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TATGTATGCGTGTGTGTGT.............................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................................................................................................................................................................................................................................................ATATATGTATGCGTGTGTT................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTG---------TG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------GTG......22200.051000001000000000000000000000000000000000000000000000000000000000
droMoj3
ACGTAA----------------------------------------------------------------------------CTATATATACATATA-TATATATAT-------ATA----TATATATATATATATATATAT----------ATATATATATA------------------------------------------------------------TATATATATATATATA----TATATATATATATATATATATATA--TATATATA---TATATATATATGTACTTATATGTGCATG---------T---ATATACATATATACACTCACGCGTATATATATATG---------CTCCTATCCGCTTATATGCATACATA------------------CGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................TATCCGCTTATATGCATACATA------------------CGC............................................................................................................................................................................................................................................................................................2541.004400000
................................................................................................................................................................................................................................................................................................................................................................TATG---------CTCCTATCCGCTTATATGC........................................................................................................................................................................................................................................................................................................................2340.502200000
................................................................................................................................................................................................................................................................................................................................................................TATG---------CTCCTATCCGCTTATATGCATA.....................................................................................................................................................................................................................................................................................................................2640.251100000
.................................................................................................................................................................................................................................................................................................................................................................................TATCCGCTTATATGCATACATA------------------...............................................................................................................................................................................................................................................................................................2240.251100000
.................................................................................................................................................................................................................................................................................................................................................................ATG---------CTCCTATCCGCTTATATGCATAC....................................................................................................................................................................................................................................................................................................................2640.251100000
.................................................................................................................................................................................................................................................................................................................................................................................TATCCGCTTATATGCATACATA------------------CGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2640.251100000
.................................................................................................................................................................................................................................................................................................................................................................................TATCCGCTTATATGCATACATA------------------CG.............................................................................................................................................................................................................................................................................................2440.251100000
..................................................................................................................................................................................................................................................................................................................................................................................ATCCGCTTATATGCATACATA------------------CGC............................................................................................................................................................................................................................................................................................2440.251100000
.................................................................................................................................................................................................................................................................................................................................................................................TATCCGCTTATATGCATACATA------------------C..............................................................................................................................................................................................................................................................................................2340.251100000
droGri2
-----------------------------------------------------------------------------------TATACATACACACA-TATATATAT-------ATA----TGTATATATACATACACACAT----------ATATATATATA----------------------------------------------TA----TATATATATATATATATATGTATG----TATATATATA----------CATA--TATATACA---AATAAATATATATATGTA--------TGTATATACATG---TCCTGTATGTGTGCAATTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
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Generated: 05/18/2015 at 06:35 PM