ID:

dsi_12737

 Coordinate:

3l:11087484-11087749 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

five_prime_UTR [3l_11087358_11087471_-]; exon [3l_11087195_11087471_-]

No Repeatable elements found

Sense Strand Reads

----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------######################################
ACACACTTACTCACTCACACAGATACAAGCACCTACACGCGGAGACTTTTGTATGTAAAACTGACGTCGTCGCTGCTGACTCTTCTTTCCTTTTTCTGTCTTTTTTTTTTTGCACATTCTCCCTGTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCCTTTCCAATCTCTTCGGCATCGGGGCAACAACAACGAAAAGCTGGCGTCGCCGTCGCCGTCATCGTTTTCTCTATTTTCCTCAATCGCTGTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTTGTGCTCCGCCGGCGC
**************************************************((.(((((((.(((((.((.((((((((((.................)))..........((((((...............................)))))).......((((((..((((.((.((((..............)))).))))))....)).))))..))).)))).)).))))).((....)).......................(((((.................))))).))))))).))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 O002
Head
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 SRR553488
RT_0-2 hours eggs
...............................................................................................................................................................................................................................................................................................................................................GTCAAAGGACGCAGTTGTGCT.......... 21 0 1 3.00 3 3 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................ATAATTGATGTCAAAGGACGC................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................ATAATTGATGTCAAAGGAC..................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................ATTGATGTCAAAGGACGCAGT................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................GATGTCAAAGGACGCAGT................ 18 0 1 1.00 1 0 0 0 1 0 0 0 0
.....................................................TGTAAATCTGACGTC.......................................................................................................................................................................................................................................................................................................... 15 1 3 0.67 2 0 0 0 0 2 0 0 0
.................................................................................................................................GTCTTCTCGCCGGCATTTT.......................................................................................................................................................................................................................... 19 2 7 0.57 4 0 4 0 0 0 0 0 0
..................................................................................................................................TCTTCTCGCCGGCATTTTTT........................................................................................................................................................................................................................ 20 2 2 0.50 1 0 1 0 0 0 0 0 0
.......................................................TAGAACTGAAGTCGTCGCTGG.................................................................................................................................................................................................................................................................................................. 21 3 2 0.50 1 0 0 0 0 0 1 0 0
.............................................................TGAGATCGTCGCTGGTGACT............................................................................................................................................................................................................................................................................................. 20 3 6 0.17 1 0 0 1 0 0 0 0 0
..................................................................................................................................TCTTCTCGCCGGCATTTTTTTT...................................................................................................................................................................................................................... 22 3 7 0.14 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................CGCGTACGCTTTCGG.............................................................................................................................................................................................. 15 2 20 0.10 2 0 0 0 0 0 0 0 2
........................................................................ATGGTGTCTCTTCTTTCCT................................................................................................................................................................................................................................................................................... 19 3 20 0.10 2 0 0 0 0 0 0 2 0
..................................................................................................................................TCTTCTCGCCGGCATTTTTTT....................................................................................................................................................................................................................... 21 3 17 0.06 1 0 1 0 0 0 0 0 0
............................................................................................................ATTGCACATTCACCCTGAT............................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 1 0 0
..................................................................................................................................................................................................................................................................CTCAAACGCTGAGCCT............................................................................................ 16 2 20 0.05 1 0 0 1 0 0 0 0 0

Anti-sense strand reads

TGTGTGAATGAGTGAGTGTGTCTATGTTCGTGGATGTGCGCCTCTGAAAACATACATTTTGACTGCAGCAGCGACGACTGAGAAGAAAGGAAAAAGACAGAAAAAAAAAAACGTGTAAGAGGGACAAGAGAGAAGAGCGGACGTAAAACACATAGAGTAGAGCACATGCGAAAGCGACGGAAAGGTTAGAGAAGCCGTAGCCCCGTTGTTGTTGCTTTTCGACCGCAGCGGCAGCGGCAGTAGCAAAAGAGATAAAAGGAGTTAGCGACACGGAAAAGTAAAAGTTAAGCGTATAAAAACGTTTGAGATGAAAGTCAATAAGCGGCTATTAACTACAGTTTCCTGCGTCAACACGAGGCGGCCGCG
**************************************************((.(((((((.(((((.((.((((((((((.................)))..........((((((...............................)))))).......((((((..((((.((.((((..............)))).))))))....)).))))..))).)))).)).))))).((....)).......................(((((.................))))).))))))).))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
...................................................................................................................................................................................................................................................CAAAAGAGATAAAAGGAG......................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................................TAGAGTAGAGCACATGCGAAAGCGA............................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................CAGTTTCCTGCGTTAAC.............. 17 1 2 1.00 2 0 2 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................AGCGGCTATTAACTACAGTTTC........................ 22 0 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................AAAGGAAATAGACAGATAAAT.................................................................................................................................................................................................................................................................... 21 3 17 0.47 8 0 2 5 0 0 0 1
.........................................................................ACGACAGACAAGAAAGGAAACAG.............................................................................................................................................................................................................................................................................. 23 3 3 0.33 1 0 0 0 0 0 1 0
.......................................................................................AGAAAAAAGACAGAAAAAAAAATA............................................................................................................................................................................................................................................................... 24 2 3 0.33 1 0 0 0 0 1 0 0
......................................................................................................................................................................................................................................................................................................................................................CTGCGTCAACACGAAGCC...... 18 2 3 0.33 1 1 0 0 0 0 0 0
....................................................................................................................................AAGAGCGGACGTAAA........................................................................................................................................................................................................................... 15 0 3 0.33 1 0 0 1 0 0 0 0
.....................................................................................AAAGGAAATAGACAGATAAATAAA................................................................................................................................................................................................................................................................. 24 3 4 0.25 1 0 0 1 0 0 0 0
.............GAGAGTGTCTAAGTTCG................................................................................................................................................................................................................................................................................................................................................ 17 2 7 0.14 1 0 0 0 0 0 0 1
...........................................................................................................AAAACTTGTAAGAGGG................................................................................................................................................................................................................................................... 16 1 8 0.13 1 0 0 1 0 0 0 0
.....................................................................................................................................................................................ACGGTTAGAGAAGCC.......................................................................................................................................................................... 15 1 16 0.06 1 0 0 0 0 1 0 0
......................................................................................................................................................................................................AGCCCCGTTGTTGCT......................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 1
...................................................................................................................................................................................................................TTGCTTTGCGAACGCAG.......................................................................................................................................... 17 2 20 0.05 1 1 0 0 0 0 0 0
.....GAATCAGTGGTTGTGTCTA...................................................................................................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0
...................................................................GCAGCGACGACAGAG............................................................................................................................................................................................................................................................................................ 15 1 20 0.05 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:11087434-11087799 - dsi_12737 ACA-------------------------------------------------------------------------------------------------------------------------------------CACTTA----------------------------CTCACTCACA---CAGATACA------A-----------GC----------ACCTACACGC-------------GGAGACTTTTGTATGTAAAACTGACGTCGTCG------------------------C--------------------TGC---TGACTCTTCT---T-------------------T--CCTTTTTCTGTC---------T---------------------------------------------TTTTTTTTTTGCACATTCTCCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGG--------------GGCAACA---ACAA------C------GAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCC---------G---------------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGC-------
droSec2 scaffold_0:3567261-3567625 - ACA-------------------------------------------------------------------------------------------------------------------------------------CACTTA----------------------------CTCACTCACA---CAGATACA------A-----------GC----------ACCTACACGC-------------GGAGACTTTTGTATGTAAAACTGACGTCGTCG------------------------C--------------------TGC---TGACTCTTCT---T-------------------T--CCTTCTTATGTC---------T----------------------------------------------TTTTTTTTTGCACATTCTCCCT-GTACTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGG--------------GGCAACA---ACAA------C------GAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCC---------G---------------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGC-------
dm3 chr3L:11357948-11358315 - ACA-------------------------------------------------------------------------------------------------------------------------------------CACTTA----------------------------CTCACTCACA---CAGATACA------A-----------GC----------ACCTACACGC-------------GGAGACTTTTGTATGTAAAACTGACGTCGTCG------------------------C--------------------TGC---TGACTCTTCT---T-------------------T--CCTTTTTCTGTC---------T----------TT---------------------------------TTTTTTTTTTGCACATTCTCCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGG--------------GGCAACA---ACAA------C------GAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCC---------G---------------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGC-------
droEre2 scaffold_4784:11362012-11362392 - ACA-------------------------------------------------------------------------------------------------------------------------------------CACTCAC-TTA-----------------------CTCACTCACA---CACATACATAAGCCA-----------GC----------ACCTACACGC-------------GGAGACTTTTGTATGTAAAACTGACGTCGTCG------------------------C--------------------TGC---TGACTCTTCT---T-------------------T--CCTTTTTCCGTC---------T----------------------------------------------TTTTTTTTTGCACATTCTCCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGG--------------GGCAACA---ACAA------C------GAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCC---------GTCGCCG---------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGC-------
droYak3 3L:11392698-11393067 - ACA-------------------------------------------------------------------------------------------------------------------------------------CACTTA----------------------------CTCACTCACA---CATACACAGAAGCAA-----------GC----------ACCTACACGC-------------GGAGACTTTTGTATGTAAAACTGACGTCGTCG------------------------C--------------------TGC---TGACTCTTCT---T-------------------T--CCTTTTTCTGTC--------------------------------------------------------TTTTTTTTTGCACATTCTCCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGG--------------GGCAACA---ACAA------C------GAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCC---------G---------------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGC-------
droEug1 scf7180000409711:3238590-3238962 - ACA-------------------------------------------------------------------------------------------------------------------------------------CACTTA----------------------------CTCACTCACT---CATATAT-----------------------------ACACCTACACGC-------------GGAGACTTTTGTATGTAAAACTGACGTCGTCG------------------------C--------------------TGT---TGCCTCTTCT---T-------------------T--CTTTTTTCTGTCTTTTTACTTT---------------------------------------------TTATTTTTTTGCACATTCTCCCA-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGG--------------GGCAACA---ACAA------C------GAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCC---------G---------------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGT-------
droBia1 scf7180000302193:235924-236303 + ACA-------------------------------------------------------------------------------------------------------------------------------------CACTCA----------------------------TCCACTCACC---CAT--AC-----------------------------ACACCTACAAGC-------------GGAGACTTTTGTATGTAAAACTGACGTCGTCG------------------------C--------------------TGC---CGCCTCTTC----TTGTTGTTGTCTT---CTT-T--CTTTTTTCAGCT--------------------------------------------------------TTATTTTTTGCACATTCGCCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGG--------------GGCAACA---ACAA------CGCCAGCGAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCC---------G---------------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGT-------
droTak1 scf7180000415349:290405-290779 + ACA-------------------------------------------------------------------------------------------------------------------------------------CACTCA--------------------------------CCCAT----------------------------------------ACACCTACAAGC-------------GGAGACTTTTGTATGTAAAACTGACGTCGTCG------------------------C--------------------TGCCGCTGCCTCGTTT---TTGTTGTTGTCTT---CTT-A--CT-TCTTCAGCT---------TT--------------------------------ATTT---TG----CTTTTTTTTGCACATTCTCCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGG--------------GGCAACA---ACAA------C------GAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCC---------G---------------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGT-------
droEle1 scf7180000490564:2287124-2287492 - ACA-------------------------------------------------------------------------------------------------------------------------------------CACTCACA---------------------------TTACTCAT----------------------------------------ACACCTACACGA--GC--------GGGAGACTTTTGTATGTAAAACTGACGTCG---------------------------C--------------------TGC---TGCCTCTTTT---TTGTTGTTGTCTT---CTT--------------TC---------T---------------------------------------------TTATTTTTTTGCACATTCTCCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGA--------------GGCAGCAACAACAA------ACACAACGAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGTC---------G---------------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------TTGCTCCGCCGG---------------CG--------
droRho1 scf7180000777121:5003-5372 + ACA-------------------------------------------------------------------------------------------------------------------------------------CACTCACA---------------------------TTACTCAT----------------------------------------ACACCTACACGC--GC--------GGGAGACTTTTGTATGTAAAACTGACGTCG---------------------------C--------------------TGC---TGCCTCTTTT---TTGTTGTTGTCTT---CTT--------------TC---------T---------------------------------------------TTATTTTTTTGCACATTCTCCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGA--------------GGCAGCAACAACAA------CAACATCGAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGTC---------G---------------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGT-------
droFic1 scf7180000454113:3351508-3351877 + ACA-------------------------------------------------------------------------------------------------------------------------------------CACTCA----------------------------GTCACTCAT----------------------------------------ACACCTACACGC-------------GGAGACTTTTGTATGTAAAACTGACGTCGCTG------------------------C--------------------TGT---TGCCTCTTTT---TTGTTGTTGTCTT---CAT-T--CTTT----------------------------------------------------------------TTTCTTTTTGCACATTCTCCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGG--------------GGCAACA---ACAA---------CAGCGAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCC---------GTCGTCG---------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCCCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGT-------
droKik1 scf7180000302391:1485161-1485518 + ACA-------------------------------------------------------------------------------------------------------------------------------------CACACA----------------------------GTC----------------------------------------------ACACCTACGCCC--AG--------CCAAGACTTTTGTATGTAAAACTGAC----------------------------------------------------TGC---T------------T-------------------T--ATTTTTTC-------------------------------------------------CCCCGTA----TTTTTTTTTGCACATTCTGCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGG--------------GGCAACAACAGCAA------CTACAACCAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCTGTCGCC---GTCGTCG---------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-CTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGC-------
droAna3 scaffold_13337:5640814-5641215 - dan_2433 ACA-------------------------------------------------------------------------------------------------------------------------------------GACACAC----------------------------------A-----------CA------ACC-ACACACCCGC----------ACCTATACACCAATGGACAGCTGAGAGACTTTTGTATGTAAAACTGACGTCGTCG------------------------T--------------------TGC---T-------------------------------TTAG-CTTT--------------------------------------------------TCGC---TG----CTTTTTTTTGCACATTCTGCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTTCGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGGC-----ATCGCCC-GGCAACAGCAACAGCAACAACAACAACGAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCCGTCGCCACCGTCGTCG---------T--------CGTCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-CTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCTAC---------------CGC-------
droBip1 scf7180000396371:960220-960635 - ACA-------------------------------------------------------------------------------------------------------------------------------------GACACAC----------------------------------ACA---CA--CA---------CCAACACACCCGCACACCCATACACCTATACACCAATGGACAGCTGAGAGACTTTTGTATGTAAAACTGACGTCGTTG------------------------C--------------------T-------------------------------------TTAG-CTTT--------------------------------------------------TCGC---TG----CTTTTTTTTGCACATTCTGCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTTCGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGGC-----ATCGCCC-GGCAACAGCAACACCAACAACAACAGCGAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCCGTCGCCGCCGTCGTCG---------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-CTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGC------TAC------CGC-------
dp5 XR_group6:10341631-10342135 + ATG----G-------------------------------------------------T---------------------CCCTTCGCCCCCTACACACCCTTT-G---------------------------------------------------------------------------------------------CCAAAGCACCCGC----------ACCTACAC-----------------A-------------------GACGTCGTTGTCGTTGTCGTCG----------------------------------------------------TCGTCGTCGTCTCTGCCT-GTAG-CTTTTTCTGCT---------CTG-CCTGTGTTC-------TGCCGCTGCCGCTGTCGC---TGC---CTTTTTTTTGCACATTCTGCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTCGTTCGGCATC--CATCGCTGCGCCCC---AACAACAACAACAACAAC------AAAAACAAAAAGAAGAGGTAGAAACAGCAACACCAATACGCCGCGCGTCGACGCCACCGCCGCCGCCGT------------------------------CGT---CGTCGTC---GTCGTCGTCGCCGTCGT--------CTCCGTCATTCGTTTTCTCTATTTTCCTCAATCGCT-TTGCCTTTTCATTTTCAATTCGCATATTTTTGCA-ACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGT--GCT--GAGCTCCGTCGT---------------TGC-------
droPer2 scaffold_20:293365-293876 + ATG----G-------------------------------------------------T---------------------CCCTTCGCCCCCTATACACCCTTT-G---------------------------------------------------------------------------------------------CCAAAGCACCCGC----------ACCTACAC-----------------A-------------------GACGTCGTTGTCGTTGTCGTCGTCG-------------------------------------------------TCGTCGTCGTCTCTGCCT-GTAG-CTTTTTCTGCT---------CTG-CCTGTGTTC-------TGCCGCTGCCGCTGTCGC---TGC--CTTTTTTTTTGCACATTCTGCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTCGTTCGGCATC--CATCGCTGCGCCCCAACAACAACAACAACAACAAC------AAAAACAAAAAGAAGAGGTAGAAACAGCAACACCAATACGCCGCGCGTCGACGCCACCGCCGCCGCCGT------------------------------CGT---CGTCGTC---GTCGTCGCCGTCGTCGT--------CTCCGTCATTCGTTTTCTCTATTTTCCTCAATCGCT-TTGCCTTTTCATTTTCAATTCGCATATTTTTGCA-ACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGT--GCT--GTGCTCCGTCGT---------------TGC-------
droWil2 scf2_1100000004511:1773489-1774021 - ACA----G-------------------------------------------------TCGCCTCTGTCGGCGTTCACTTCACCACCCCCCCAACACCC----TCACCCTGTACCCTGCACC---------------CACCCGCATTACGGTTACGGACTGAGCCCTGCACCTCGTTCGCACCAGAGACACA---------------------------------------------------------------------GAGACTGACGTCGACG---------TCGACGT-----TAGCTGCTGTTGCCGAACTGTTGTTGT---T----GTTCTTTCTGGTTGTTGCTTTTGCCTT-G--TTTTTTTCTGCT---------TTTTTTTGTGTTTTCTTCTTTGGCTCTGTTGCT-TTGT---TGC---TGTTGTTTTGCACATTCTGTCTGGTTCTCTCTTCTCGCATGCATTTTGTGTATCTCATCTCGTGTGCGCTTTCGCCGCC------------------------------TTTTTCAATCTCT-C----GGCATCG--------------------------------------------------------------------------------------------------------TTGACGTCGCCGTTGCCGT------------------TGC---CGTCGTC---GTCGTCG---------G--------CGTCGTCA-TCGTTTTCTCTATTTTCCCCAATCGCTTTTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTTGGTTGAGTGCTCCGCCGC---------------TGC-CCAGAG
droVir3 scaffold_13049:23573972-23574531 + ATGTATGGTTGTGGCACAGCACACCAGTCTCCCCCGCCCCCATCCCCTCCCCCGCCATT--------------------------------------------AACTCTATCAGCAGCACCTACGTATTGCCGACAGACACAC----------------------------------ACA---CA--CAC-----------ACACACTCGCAC------ACAC----------------------------------TGTAAATCTGACGTTGCCG---------TCGTCGTCGTTGTCGTTGCTGTTGCCGAAC-----------------------------------------------------------------------------------------------------TGTTGC---TGCCTTTTTTTTTTTGCACATTCTGTCT-GTTCTCTCTTCTCGCTTGCATTTTGTGTATCTCATCTCGTGTGCGCTTTCGCCGTTTTTGCGCTGCTTTTGCCTCTGCCACATTGCTT-TCCAATCTCT-C----GGCATCGC------TGCGCCCC---AACAACAAAAGCAACAACTACAGCAACAA-------------------------------T-CGCCGC-CGTCGCTGTCGCTGTCGCTGG---------------------------------CGTCGTCGTCGTC---GTCGTCGTCGTCGTCGTTGCCCCGACGTCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-TTGCCTTTTCATTTTCAATTCGCATATT-TTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCGTCC---GCTGCCATCGTCGC-------
droMoj3 scaffold_6680:18193294-18193831 + ATGTATGGCTGTGCCACAGCACACCAATCTCCCCCGCCCCCGACCTCT-----ACAGTT--------------------------------------------ACCTCTATCGGCAGCACCTACG---------------TA----------------------------TACACACACA---CACGCACA------C---------------------ACACTTACAGAC-------------GG-----------TGTACA-------TCGTTGTCG---------------------TTGCTATTGCCGAACTGTTGCTGC---TGCT---TTT---TTGTTGTT------------------TTTTTT--T---------T---------------------------------------------TTTTTTTTTTGCACATTCTGTCT-GTTCTCTCTTTTCGCTTGCATTTTGTGTATCTCATCTCGTGTGCGCTTTCGCCGTTTTTGCGCTGCTTTTGCCTCTGCCACATTGCTT-TTCAATCTCT-C----GGCATCGC------TGCGCCCC---AACAACAAAGGCAACAACTACAGCAACAA-------------------------------T-CGC-------------CGCCGCCGCCGCCGTCGTCGTCGTCGCTGCTGCTGCTGTCGCTGGCGTCGTC---------G---------------TTGCCCCGACGTCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-TTGCCTTTTCATTTTCAATTCGCATATT-TTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCGTC---------------CGC-------
droGri2 scaffold_15110:14082292-14082731 - CTC----------------------------------------------------------------------------CCCCTCCCCTCCCACACCCC-TTTAACTCTATCAGCAGCACCTACG------------------------------------------------------------------------------------------------------ACAC-------------AGACAC----------AAAACTGACGTCGCTG------------------------C--------------------TGC---TGCTT--------TTATTATT-TCTT-------------TTTTTT--T---------T---------------------------------------------TTTTGTTTTTGTACATTCTGCCTTGTTCTCTCTTCTCGCTTGCATTTTGTGTATCTCATCTCGTGTGCGCTTTCGCCGTTTTT----------TGCCGC--------TGCTT-TCCAATCTCT-C----GGCATCGC------TGCGCCCC---AACAGCAACAA------C------AATAA-------------------------------G-CGT----------------------CGCCGTCGTCGTCGTCGCT---------------GGCGTCGTC---------GTCGTCG---------TTGCCCCGACGTCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCTTTTGCCTTTTCATTTTCAATTCGCATATT-TTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCGTCCGCCGCTGCTGTCGACGCCTC----

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACA-------------------------------------------------------------------------------------------------------------------------------------CACTTA----------------------------CTCACTCACA---CAGATACA------A-----------GC----------ACCTACACGC-------------GGAGACTTTTGTATGTAAAACTGACGTCGTCG------------------------C--------------------TGC---TGACTCTTCT---T-------------------T--CCTTTTTCTGTC---------T---------------------------------------------TTTTTTTTTTGCACATTCTCCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGG--------------GGCAACA---ACAA------C------GAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCC---------G---------------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGC-------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAGGACGCAGTT------GTGCT................................2113.00330000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGATGTCAAAGGACGC...............................................2111.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGATGTCAAAGGAC.................................................1911.00110000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTCAAAGGACGCAGT............................................2111.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTCAAAGGACGCAGT............................................1811.00100000100000000000
droSec2
ACA-------------------------------------------------------------------------------------------------------------------------------------CACTTA----------------------------CTCACTCACA---CAGATACA------A-----------GC----------ACCTACACGC-------------GGAGACTTTTGTATGTAAAACTGACGTCGTCG------------------------C--------------------TGC---TGACTCTTCT---T-------------------T--CCTTCTTATGTC---------T----------------------------------------------TTTTTTTTTGCACATTCTCCCT-GTACTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGG--------------GGCAACA---ACAA------C------GAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCC---------G---------------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGC-------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTCAAAGGACGCA..............................................1911.0010001
dm3
ACA-------------------------------------------------------------------------------------------------------------------------------------CACTTA----------------------------CTCACTCACA---CAGATACA------A-----------GC----------ACCTACACGC-------------GGAGACTTTTGTATGTAAAACTGACGTCGTCG------------------------C--------------------TGC---TGACTCTTCT---T-------------------T--CCTTTTTCTGTC---------T----------TT---------------------------------TTTTTTTTTTGCACATTCTCCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGG--------------GGCAACA---ACAA------C------GAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCC---------G---------------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGC-------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGATGTCAAAGGA..................................................18116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100100010000000130000000000000000000000000300000000000000000000000000000000005000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAAAGGACGCAGTT------GTGCT................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTATTCGCCGATAATTGATGTCAAAG....................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGATGTCAAAGGACGC...............................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000200
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAGTT------GTGCTCCGCCG..........................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTCAAAGGACGCAGT............................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGATGTCAAAGGACGCAGT............................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAAGGACGCAGTT------GTGCTC...............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGATGTCAAAGGACGCAGT............................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTCAAAGGACGCAGT............................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTCAAAGGACGC...............................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCAAAGGACGCAGTT------GTG..................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTCAAAGGACGCAGTT------G....................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGTCAAAGGACGCAGTT------GTGC.................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCCGATAATTGATGT.........................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTCAAAGGACGCAGTT------GTG..................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTATTCGCCGATAATTGATG..........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACA---ACAA------C------GAAAA--------------------------------------------------------GCTG..............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCAAAGGACGCAGTT------GTGCTCC..............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGATAATTGATGTCAAAGGA..................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGATAATTGATGTCAAAGGACG................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CA-------------------------------------------------------------------------------------------------------------------------------------CACTTA----------------------------CTCACTCACA---CAGATACA------A-----------GC----------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGACGCAGTT------GTGCTCCG.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTCAAAGGACGCAGTT------G....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGG--------------GGCAACA---ACAA------C------G..............................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCAGTT------GTGCTCCGC............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---ACAA------C------GAAAA--------------------------------------------------------GCTGG---------------------------------CG..........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATAATTGATGTCAAAGGA..................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGTCAAAGGACGCAGT............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCGCCGATAATTGATGT.........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGATGTCAAAGGAC.................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ACAA------C------GAAAA--------------------------------------------------------GCTGG---------------------------------CG..........................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTTCAGTTATTCGCCGATAATTGA............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCAGTT------GTGCTCCGCC...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAATTGATGTCAAAGGACGCAGT............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAGGACGCAGTT------GT...................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCCGATAATTGATGT.........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTCAAAGGACGCAGTT------GT...................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGATGTCAAAGGACG................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGGACGCAGTT------GTGCTCC..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGATGTCAAAGGACGCAGTT------G....................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTCAAAGGACGCAGTT------GTGC.................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGATGTCAAAGGACGC...............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAATTGATGTCAAAGGACGCAG.............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TCCAATCTCTTC----GGCATCGG--------------G.........................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGATGTCAAAGGACGC...............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTCGCCGATAATTGATGT.........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGG--------------GGCAACA---ACAA------C------GAA............................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTTTTCTGTC---------T----------TT---------------------------------TTTTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ACA-------------------------------------------------------------------------------------------------------------------------------------CACTCAC-TTA-----------------------CTCACTCACA---CACATACATAAGCCA-----------GC----------ACCTACACGC-------------GGAGACTTTTGTATGTAAAACTGACGTCGTCG------------------------C--------------------TGC---TGACTCTTCT---T-------------------T--CCTTTTTCCGTC---------T----------------------------------------------TTTTTTTTTGCACATTCTCCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGG--------------GGCAACA---ACAA------C------GAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCC---------GTCGCCG---------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGC-------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
ACA-------------------------------------------------------------------------------------------------------------------------------------CACTTA----------------------------CTCACTCACA---CATACACAGAAGCAA-----------GC----------ACCTACACGC-------------GGAGACTTTTGTATGTAAAACTGACGTCGTCG------------------------C--------------------TGC---TGACTCTTCT---T-------------------T--CCTTTTTCTGTC--------------------------------------------------------TTTTTTTTTGCACATTCTCCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGG--------------GGCAACA---ACAA------C------GAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCC---------G---------------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGC-------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
ACA-------------------------------------------------------------------------------------------------------------------------------------CACTTA----------------------------CTCACTCACT---CATATAT-----------------------------ACACCTACACGC-------------GGAGACTTTTGTATGTAAAACTGACGTCGTCG------------------------C--------------------TGT---TGCCTCTTCT---T-------------------T--CTTTTTTCTGTCTTTTTACTTT---------------------------------------------TTATTTTTTTGCACATTCTCCCA-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGG--------------GGCAACA---ACAA------C------GAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCC---------G---------------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGT-------SizeHit CountTotal NormTotal
No Reads
droBia1
ACA-------------------------------------------------------------------------------------------------------------------------------------CACTCA----------------------------TCCACTCACC---CAT--AC-----------------------------ACACCTACAAGC-------------GGAGACTTTTGTATGTAAAACTGACGTCGTCG------------------------C--------------------TGC---CGCCTCTTC----TTGTTGTTGTCTT---CTT-T--CTTTTTTCAGCT--------------------------------------------------------TTATTTTTTGCACATTCGCCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGG--------------GGCAACA---ACAA------CGCCAGCGAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCC---------G---------------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGT-------SizeHit CountTotal NormTotal
No Reads
droTak1
ACA-------------------------------------------------------------------------------------------------------------------------------------CACTCA--------------------------------CCCAT----------------------------------------ACACCTACAAGC-------------GGAGACTTTTGTATGTAAAACTGACGTCGTCG------------------------C--------------------TGCCGCTGCCTCGTTT---TTGTTGTTGTCTT---CTT-A--CT-TCTTCAGCT---------TT--------------------------------ATTT---TG----CTTTTTTTTGCACATTCTCCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGG--------------GGCAACA---ACAA------C------GAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCC---------G---------------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGT-------SizeHit CountTotal NormTotal
No Reads
droEle1
ACA-------------------------------------------------------------------------------------------------------------------------------------CACTCACA---------------------------TTACTCAT----------------------------------------ACACCTACACGA--GC--------GGGAGACTTTTGTATGTAAAACTGACGTCG---------------------------C--------------------TGC---TGCCTCTTTT---TTGTTGTTGTCTT---CTT--------------TC---------T---------------------------------------------TTATTTTTTTGCACATTCTCCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGA--------------GGCAGCAACAACAA------ACACAACGAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGTC---------G---------------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------TTGCTCCGCCGG---------------CG--------SizeHit CountTotal NormTotal
No Reads
droRho1
ACA-------------------------------------------------------------------------------------------------------------------------------------CACTCACA---------------------------TTACTCAT----------------------------------------ACACCTACACGC--GC--------GGGAGACTTTTGTATGTAAAACTGACGTCG---------------------------C--------------------TGC---TGCCTCTTTT---TTGTTGTTGTCTT---CTT--------------TC---------T---------------------------------------------TTATTTTTTTGCACATTCTCCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGA--------------GGCAGCAACAACAA------CAACATCGAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGTC---------G---------------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGT-------SizeHit CountTotal NormTotal
No Reads
droFic1
ACA-------------------------------------------------------------------------------------------------------------------------------------CACTCA----------------------------GTCACTCAT----------------------------------------ACACCTACACGC-------------GGAGACTTTTGTATGTAAAACTGACGTCGCTG------------------------C--------------------TGT---TGCCTCTTTT---TTGTTGTTGTCTT---CAT-T--CTTT----------------------------------------------------------------TTTCTTTTTGCACATTCTCCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGG--------------GGCAACA---ACAA---------CAGCGAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCC---------GTCGTCG---------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCCCAATCGCT-GTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGT-------SizeHit CountTotal NormTotal
No Reads
droKik1
ACA-------------------------------------------------------------------------------------------------------------------------------------CACACA----------------------------GTC----------------------------------------------ACACCTACGCCC--AG--------CCAAGACTTTTGTATGTAAAACTGAC----------------------------------------------------TGC---T------------T-------------------T--ATTTTTTC-------------------------------------------------CCCCGTA----TTTTTTTTTGCACATTCTGCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGG--------------GGCAACAACAGCAA------CTACAACCAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCTGTCGCC---GTCGTCG---------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-CTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGG---------------CGC-------SizeHit CountTotal NormTotal
No Reads
droAna3
ACA-------------------------------------------------------------------------------------------------------------------------------------GACACAC----------------------------------A-----------CA------ACC-ACACACCCGC----------ACCTATACACCAATGGACAGCTGAGAGACTTTTGTATGTAAAACTGACGTCGTCG------------------------T--------------------TGC---T-------------------------------TTAG-CTTT--------------------------------------------------TCGC---TG----CTTTTTTTTGCACATTCTGCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTTCGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGGC-----ATCGCCC-GGCAACAGCAACAGCAACAACAACAACGAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCCGTCGCCACCGTCGTCG---------T--------CGTCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-CTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCTAC---------------CGC-------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCCGATAATTGATGT.........................................................1911.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAACAACAACAAC...............................................................................................................................................................................................................................................................................................................20200.051100000
droBip1
ACA-------------------------------------------------------------------------------------------------------------------------------------GACACAC----------------------------------ACA---CA--CA---------CCAACACACCCGCACACCCATACACCTATACACCAATGGACAGCTGAGAGACTTTTGTATGTAAAACTGACGTCGTTG------------------------C--------------------T-------------------------------------TTAG-CTTT--------------------------------------------------TCGC---TG----CTTTTTTTTGCACATTCTGCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTTCGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTC----GGCATCGGC-----ATCGCCC-GGCAACAGCAACACCAACAACAACAGCGAAAA--------------------------------------------------------GCTGG---------------------------------CGTCGCCGTCGCCGCCGTCGTCG---------T--------CGCCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-CTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCCGC------TAC------CGC-------SizeHit CountTotal NormTotal
No Reads
dp5
ATG----G-------------------------------------------------T---------------------CCCTTCGCCCCCTACACACCCTTT-G---------------------------------------------------------------------------------------------CCAAAGCACCCGC----------ACCTACAC-----------------A-------------------GACGTCGTTGTCGTTGTCGTCG----------------------------------------------------TCGTCGTCGTCTCTGCCT-GTAG-CTTTTTCTGCT---------CTG-CCTGTGTTC-------TGCCGCTGCCGCTGTCGC---TGC---CTTTTTTTTGCACATTCTGCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTCGTTCGGCATC--CATCGCTGCGCCCC---AACAACAACAACAACAAC------AAAAACAAAAAGAAGAGGTAGAAACAGCAACACCAATACGCCGCGCGTCGACGCCACCGCCGCCGCCGT------------------------------CGT---CGTCGTC---GTCGTCGTCGCCGTCGT--------CTCCGTCATTCGTTTTCTCTATTTTCCTCAATCGCT-TTGCCTTTTCATTTTCAATTCGCATATTTTTGCA-ACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGT--GCT--GAGCTCCGTCGT---------------TGC-------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCAAAGGACGCAGT--GCT--GAG..................................2313.0030200001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAGGACGCAGT--GCT--GAG..................................2111.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTCAAAGGACGCAGT--G.........................................2211.0010000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGACGCAGT--GCT--GAGCTC...............................2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGGACGCAGT--GCT--GAGCTCCG.............................2411.0010000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAAC------AAAAAC.........................................................................................................................................................................................................................................................................................................20200.0510010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGTC---GTCGTCGTCGCCGTC.............................................................................................................................................................................22200.0510000001000
...................................................................................................................................................................................................................................................................................GTCGTTGTCGTCG----------------------------------------------------TCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.0510000000001
droPer2
ATG----G-------------------------------------------------T---------------------CCCTTCGCCCCCTATACACCCTTT-G---------------------------------------------------------------------------------------------CCAAAGCACCCGC----------ACCTACAC-----------------A-------------------GACGTCGTTGTCGTTGTCGTCGTCG-------------------------------------------------TCGTCGTCGTCTCTGCCT-GTAG-CTTTTTCTGCT---------CTG-CCTGTGTTC-------TGCCGCTGCCGCTGTCGC---TGC--CTTTTTTTTTGCACATTCTGCCT-GTTCTCTCTTCTCGCCTGCATTTTGTGTATCTCATCTCGTGTACGCTTTCGCTGCC------------------------------TT-TCCAATCTCTTCGTTCGGCATC--CATCGCTGCGCCCCAACAACAACAACAACAACAAC------AAAAACAAAAAGAAGAGGTAGAAACAGCAACACCAATACGCCGCGCGTCGACGCCACCGCCGCCGCCGT------------------------------CGT---CGTCGTC---GTCGTCGCCGTCGTCGT--------CTCCGTCATTCGTTTTCTCTATTTTCCTCAATCGCT-TTGCCTTTTCATTTTCAATTCGCATATTTTTGCA-ACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGT--GCT--GTGCTCCGTCGT---------------TGC-------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGT--GCT--GTGCTCCGT............................1811.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGT------------------------------CGT---CGTCGTC---GTC.........................................................................................................................................................................................19200.153300000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCGCCGT------------------------------CGT---CGTCG.................................................................................................................................................................................................1880.131100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGT------------------------------CGT---CGTCGTC---GT..........................................................................................................................................................................................18200.102200000
.....................................................................................................................................................................................................................................................................................CGTTGTCGTCGTCG-------------------------------------------------TCGTCGTCGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25120.081100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT------------------------------CGT---CGTCGTC---GTCGTCGCC...................................................................................................................................................................................21200.051100000
droWil2
ACA----G-------------------------------------------------TCGCCTCTGTCGGCGTTCACTTCACCACCCCCCCAACACCC----TCACCCTGTACCCTGCACC---------------CACCCGCATTACGGTTACGGACTGAGCCCTGCACCTCGTTCGCACCAGAGACACA---------------------------------------------------------------------GAGACTGACGTCGACG---------TCGACGT-----TAGCTGCTGTTGCCGAACTGTTGTTGT---T----GTTCTTTCTGGTTGTTGCTTTTGCCTT-G--TTTTTTTCTGCT---------TTTTTTTGTGTTTTCTTCTTTGGCTCTGTTGCT-TTGT---TGC---TGTTGTTTTGCACATTCTGTCTGGTTCTCTCTTCTCGCATGCATTTTGTGTATCTCATCTCGTGTGCGCTTTCGCCGCC------------------------------TTTTTCAATCTCT-C----GGCATCG--------------------------------------------------------------------------------------------------------TTGACGTCGCCGTTGCCGT------------------TGC---CGTCGTC---GTCGTCG---------G--------CGTCGTCA-TCGTTTTCTCTATTTTCCCCAATCGCTTTTGCCTTTTCATTTTCAATTCGCATATTTTTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTTGGTTGAGTGCTCCGCCGC---------------TGC-CCAGAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCGCCGATAATTGATGTCAAAG....................................................2512.00220000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGGTTGAGTGCTCCG.............................1811.00100001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTCAAAGGACGCAGTTGGTTGAG....................................2611.00100001
................................................................................................................................................TTACGGTTACGGACTGAGCCCTGCACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGGTTGAGTGCTCCGC............................1911.00100001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGCCGT------------------TGC---CGTCGT................................................................................................................................................................................................18110.09100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT------------------TGC---CGTCGTC---GTCGTC......................................................................................................................................................................................18170.06100010
droVir3
ATGTATGGTTGTGGCACAGCACACCAGTCTCCCCCGCCCCCATCCCCTCCCCCGCCATT--------------------------------------------AACTCTATCAGCAGCACCTACGTATTGCCGACAGACACAC----------------------------------ACA---CA--CAC-----------ACACACTCGCAC------ACAC----------------------------------TGTAAATCTGACGTTGCCG---------TCGTCGTCGTTGTCGTTGCTGTTGCCGAAC-----------------------------------------------------------------------------------------------------TGTTGC---TGCCTTTTTTTTTTTGCACATTCTGTCT-GTTCTCTCTTCTCGCTTGCATTTTGTGTATCTCATCTCGTGTGCGCTTTCGCCGTTTTTGCGCTGCTTTTGCCTCTGCCACATTGCTT-TCCAATCTCT-C----GGCATCGC------TGCGCCCC---AACAACAAAAGCAACAACTACAGCAACAA-------------------------------T-CGCCGC-CGTCGCTGTCGCTGTCGCTGG---------------------------------CGTCGTCGTCGTC---GTCGTCGTCGTCGTCGTTGCCCCGACGTCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-TTGCCTTTTCATTTTCAATTCGCATATT-TTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCGTCC---GCTGCCATCGTCGC-------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGTT------GTGCTCCGCGTCC---GC...................2213.003000000000000000000000000000000000000000000000000000000000000003
.................................................CCCCGCCATT--------------------------------------------AACTCTATCAGCAGCAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCCCGACGTCGTCA-TCG.......................................................................................................................................................2011.001000000000000100000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCAAAGGACGCAGTT------.....................................1811.001100000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGATGTCAAAGGA..................................................1811.001000000000000000000000000000000000000000000000000000000000000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTCAAAGGACGCAGTT------GC...................................2411.001000000000000000000000000000000000000000000000000000000000000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCT-GTTCTCTCTTCTCGCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA-------------------------------T-CGCCGC-CGTCGCTGT.........................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTCGTTGCCCCGACGTCGTCA-TC........................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGCAACAA-------------------------------T-CGCCGC-CG................................................................................................................................................................................................................................................................2011.001100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCACATTCTGTCT-GTTCTCTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA-------------------------------T-CGCCGC-CGTCGCTGG.........................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-TCGTTTTCTCTATTTTCC........................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTCAAAGGACGCAGTT------GT...................................2111.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................GTTGCCG---------TCGTCGTCGTTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.002000000000000000000000000000000000000000000000000000000000000110
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTC---GTCGTCGTCGTCGTCGTTGCC.......................................................................................................................................................................2680.252200000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTCGTCGTC---GTCGTC......................................................................................................................................................................................18200.102000000020000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---GTCGTCGTCGTCGTCGTTGCC.......................................................................................................................................................................22100.101010000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CAC----------------------------------ACA---CA--CAC-----------ACACACTCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000020000000000000000000000000000000000000
........................................................................................................................................GACACAC----------------------------------ACA---CA--CAC-----------ACACACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.102002000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---GTCGTCGTCGTCGTCGTTGC........................................................................................................................................................................21140.071000000001000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGTCGTCGTC---GTCGTCGTC...................................................................................................................................................................................22200.051010000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................GACACAC----------------------------------ACA---CA--CAC-----------ACAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................CAC----------------------------------ACA---CA--CAC-----------ACACACTCGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000001000000000000000000000000000
............................................................................................................................................CAC----------------------------------ACA---CA--CAC-----------ACACACTCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTCGTCGTC---GTCGTCGTC...................................................................................................................................................................................20200.051100000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGCTGTCGCTGTCGC................................................................................................................................................................................................................................................18200.051000000000000000000000000000000000000000000000000000000000010000
droMoj3
ATGTATGGCTGTGCCACAGCACACCAATCTCCCCCGCCCCCGACCTCT-----ACAGTT--------------------------------------------ACCTCTATCGGCAGCACCTACG---------------TA----------------------------TACACACACA---CACGCACA------C---------------------ACACTTACAGAC-------------GG-----------TGTACA-------TCGTTGTCG---------------------TTGCTATTGCCGAACTGTTGCTGC---TGCT---TTT---TTGTTGTT------------------TTTTTT--T---------T---------------------------------------------TTTTTTTTTTGCACATTCTGTCT-GTTCTCTCTTTTCGCTTGCATTTTGTGTATCTCATCTCGTGTGCGCTTTCGCCGTTTTTGCGCTGCTTTTGCCTCTGCCACATTGCTT-TTCAATCTCT-C----GGCATCGC------TGCGCCCC---AACAACAAAGGCAACAACTACAGCAACAA-------------------------------T-CGC-------------CGCCGCCGCCGCCGTCGTCGTCGTCGCTGCTGCTGCTGTCGCTGGCGTCGTC---------G---------------TTGCCCCGACGTCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCT-TTGCCTTTTCATTTTCAATTCGCATATT-TTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCGTC---------------CGC-------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................TGTT------------------TTTTTT--T---------T---------------------------------------------TTTTTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.102000020
droGri2
CTC----------------------------------------------------------------------------CCCCTCCCCTCCCACACCCC-TTTAACTCTATCAGCAGCACCTACG------------------------------------------------------------------------------------------------------ACAC-------------AGACAC----------AAAACTGACGTCGCTG------------------------C--------------------TGC---TGCTT--------TTATTATT-TCTT-------------TTTTTT--T---------T---------------------------------------------TTTTGTTTTTGTACATTCTGCCTTGTTCTCTCTTCTCGCTTGCATTTTGTGTATCTCATCTCGTGTGCGCTTTCGCCGTTTTT----------TGCCGC--------TGCTT-TCCAATCTCT-C----GGCATCGC------TGCGCCCC---AACAGCAACAA------C------AATAA-------------------------------G-CGT----------------------CGCCGTCGTCGTCGTCGCT---------------GGCGTCGTC---------GTCGTCG---------TTGCCCCGACGTCGTCA-TCGTTTTCTCTATTTTCCTCAATCGCTTTTGCCTTTTCATTTTCAATTCGCATATT-TTGCAAACTCTACTTTCAGTTATTCGCCGATAATTGATGTCAAAGGACGCAGTT------GTGCTCCGCGTCCGCCGCTGCTGTCGACGCCTC----SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCGCGTCCGCCGCTGCTGTC............2311.00110

Generated: 05/19/2015 at 02:16 PM