ID:

dsi_12683

 Coordinate:

2l:3361747-3362018 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.6 -24.5 -24.4

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

GTTACAGCTATCTGGTGGAGGAATTGCACATGCAACTGCTTTCCAATGCGGTATGTCGAGATTGATAATGAAATTATTATAAGTACTATAATTTCGATTTTCTTAAAAACAATTTTACACACACTAACTAACTAATTGAGACAGAACAAGGTGAATTTTTGATTTATGATGTGCTCATGCCTTTTTATATGTTTTTTATAAGGCTTAGTAGATTAGGTTCATTCTCTTTTAAAATACCTCACATACTGCTTTTCTTATTTTAATTATGATATTATATAGTATAATAAAAACTAAAGAGAACTTCTCGGATTTCCCTCAGAAGGTGCCCATTGACACATCGCACTTCTTCTGGCTGGTCACCTACTTCCTGAA
***********************************************************************************************************************................((((((.((.(((..(((((((...)))))))..))).))...(((((................))))).(((((....((((.................))))....))))).(((((((.((((.((((((.(((...))).)))))).))))...)))))))..)))))).........******************************************************* 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR902008
ovaries
 M024
male body		 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR618934
dsim w501 ovaries
.......................................................................................................................CACACTAACTAACTAATTGAGACAG.................................................................................................................................................................................................................................... 25 0 1 8.00 8 8 0 0 0 0 0 0 0 0
......................................................................................................................ACACACTAACTAACTAATTGAGACAG.................................................................................................................................................................................................................................... 26 0 1 4.00 4 3 0 0 1 0 0 0 0 0
.....................................................................................................................CACACACTAACTAACTAATTGAGACAG.................................................................................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................AGAACTTCTCGGATTTCCCTC....................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TATAAGGCTTAGTAGATTAGG........................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................CATACTAACTAACTAATTGAGACAG.................................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................................CTTCTTCTGGCTGGTCACC........... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................ACTAACTAACTAATTGAGACAG.................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............TGGGGGAACTGCACATGCAACTGCA............................................................................................................................................................................................................................................................................................................................................ 25 3 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................TACAGCTTTTCTTATCTTAATA........................................................................................................... 22 3 4 0.25 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................................................................................................GATAACTTCTCGGAT.............................................................. 15 1 4 0.25 1 0 0 0 0 1 0 0 0 0
.....................AGTAGCACATGCAACT............................................................................................................................................................................................................................................................................................................................................... 16 2 20 0.20 4 0 0 0 0 0 4 0 0 0
........................TGCACATGCAACTGC............................................................................................................................................................................................................................................................................................................................................. 15 0 6 0.17 1 0 0 0 0 0 1 0 0 0
..............................................................................................................................ACTAACTAAATGGGACAGGA.................................................................................................................................................................................................................................. 20 3 8 0.13 1 0 0 0 0 0 0 1 0 0
.....................................................TGTGGAAATTGATAATGAAATCA........................................................................................................................................................................................................................................................................................................ 23 3 8 0.13 1 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................................................................TTAGATAGTAGAATAATAACT................................................................................ 21 3 8 0.13 1 0 1 0 0 0 0 0 0 0
...ACAGCTATCAGGTGGAAGGA............................................................................................................................................................................................................................................................................................................................................................. 20 3 8 0.13 1 0 0 0 0 0 1 0 0 0
.........................................................................................................................................CTAACAGAACAAGGTGAATT....................................................................................................................................................................................................................... 20 3 13 0.08 1 0 0 0 0 0 0 0 1 0
.............................................................................................TCCATTTTCTTAGAAACAAG................................................................................................................................................................................................................................................................... 20 3 19 0.05 1 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................................................................................................................TAAAGAGAAATTCTTGGA............................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 1
....................................................ATGTCGTGATTGAAAATGG............................................................................................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................TTCATTCTCTTTTGA............................................................................................................................................ 15 1 20 0.05 1 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

CAATGTCGATAGACCACCTCCTTAACGTGTACGTTGACGAAAGGTTACGCCATACAGCTCTAACTATTACTTTAATAATATTCATGATATTAAAGCTAAAAGAATTTTTGTTAAAATGTGTGTGATTGATTGATTAACTCTGTCTTGTTCCACTTAAAAACTAAATACTACACGAGTACGGAAAAATATACAAAAAATATTCCGAATCATCTAATCCAAGTAAGAGAAAATTTTATGGAGTGTATGACGAAAAGAATAAAATTAATACTATAATATATCATATTATTTTTGATTTCTCTTGAAGAGCCTAAAGGGAGTCTTCCACGGGTAACTGTGTAGCGTGAAGAAGACCGACCAGTGGATGAAGGACTT
*******************************************************................((((((.((.(((..(((((((...)))))))..))).))...(((((................))))).(((((....((((.................))))....))))).(((((((.((((.((((((.(((...))).)))))).))))...)))))))..)))))).........*********************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR618934
dsim w501 ovaries
.......................................................................................................................................................................................................................................................................................................................AGGGAGTCCTACACTGGTAACT....................................... 22 3 1 1.00 1 0 0 1 0 0
...........................................................................................................................................................................................................................................................................................................................AGTCTCCCATGGGTAAATGTGT................................... 22 3 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................CAAGTAAGAGTAAATTGTATGT...................................................................................................................................... 22 3 3 0.67 2 0 2 0 0 0
.......................................................................................................................................................................................................................ACAAGTAAGAGTAAATTGTATG....................................................................................................................................... 22 3 2 0.50 1 0 1 0 0 0
...............................................................................................................................................................................................................................................................................................................................TTCCACGGCTCGCTGTGTAG................................. 20 3 5 0.20 1 1 0 0 0 0
....................................................................................................................................................................................................................................................................ATTAATACGATAATATAT.............................................................................................. 18 1 5 0.20 1 0 0 0 1 0
.....................................................................................................................................................................................................................................................................................................................AAGGGGAGTCTACCGCGGGT........................................... 20 3 6 0.17 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:3361697-3362068 - dsi_12683 GTTACAGCTATCTGGTGGAGGAATTGCACATGCAACTGCTTTCCAATGCGGTATGTCGAG--ATTG--ATAATGAAATTA--TTATAAGTAC--------------TATAATTTCGATTTT-------------------CTTAAAAACAATTTTACACACACTA------ACT---AACTAATTGAGACAGAACAAGGTGAATTTTTG-------------ATTTAT-----------------------------------------------------GATG--------------------------------------------------------------------------------------------TGCTCATGCCTTTT-TA-------------------------------------------------------------------------------------------------------TATGTTTTT------TAT---------------------------------------------------------------------------------------------AAGGCTT--A---GTAGATTAGGTTCATTCTCTTTTAAAATACCTCACATA--------CTGCTTTTCT----TATT------------------TTAATTATGATATTATATA-------------------------------------GTATAATAAAAACTAAAG------------AGAACTTCTCGGA-TTTCCCTCAGAAGGTGCCCATTGACACATCGCACTTCTTCTGGCTGGTCACCTACTTCCTGAA
droSec2 scaffold_5:1604421-1604793 - GTTACAGCTATCTGGTGGAGGAATTGCACATGCAACTGCTTTCCAATGCGGTATGTCGAT--ATTG--ATATAGAAATTA--TTATAAGTAC--------------TATAATTTCGATTTT-------------------CTTAATAACAAATTTACACACACTA------ACT---AACTAATTGAGACAGAACAAGGTGAATTTTTG-------------ATTTAT-----------------------------------------------------GATG--------------------------------------------------------------------------------------------TGCTCATACCTTTT-CA-------------------------------------------------------------------------------------------------------TATGTTTTT------TTTGAG---------------------------------------------------------------------------------------------GCTT--A---GTAGATTAGGTTCATTATCTTTTGAAATACCTCACATC--------TTGCTATTAT----TATT------------------TTAAATATGATATTATATA-------------------------------------TTATAATAAAAACTAAAG------------AGAACTTCTCGGATTTCCCTCCAGAAGGTGCCCATTGACACGTCGCATTTCTTCTGGCTGGTCACCTACTTCCTGAA
dm3 chr2L:3502074-3502465 - GTTACAGCTATCTGGTGGAGGAACTGCACATGCAACTGCTTTCCAATGCGGTATGTCGAT--ATTG--ATATAGAAATTA--TTATGAGGAC--------------TATAATTTCGATTTT-------------------CTTAAAAACAAATTTACACACACTA------ACT---AACTAATTGAGACAGAACAAGGTGAATTTTTGT-----------CATTTAT-----------------------------------------------------GATG--------------------------------------------------------------------------------------------CGCTCATCGCTTTT-CA-------------------------------------------------------------------------------------------------------TATGTTTTTCGGAGG-------CTT-------A----------------------------------------------------------------------AAACTTAACAGGCTTAAA---GTAGATTAGGTTCATTATCTTTTGAAATACCTCACATC--------TTGCTATTAT----TATT------------------TTAATTATAATATTATATA-------------------------------------TTATCATAAAAACTAAAG------------AGAACTTCTCTGACTTTCCTCCAGAAGGTGCCCATTGACACATCGCACTTCTTCTGGCTGGTCACCTACTTCCTGAA
droEre2 scaffold_4929:3537119-3537515 - GCTACAGCTATCTGGTGGAGGAACTGCACATTCAACTGCTTTCCAATGCGGTAAGCTTATAGATTG--CTATAGAA-TTA--TTATAAATACTGCA------ATTGTCTCATTTCGATTGT-------------------CCTAATAACAAATTGTAACACACTG---------------AACTCGAGACAGAACAAGGTGAAAATCATAAGAAACTTCTAGAT----------T-TTATTGTGCAACA-----------T--------------------GG--AGCTGCTTGTGAA---------------------ATTTT------------------------------------------------------------------AAATTAGCAATAGCTCCTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTTAAA---GTAGA-----CTCAATATCCTTTTAGATGCCACACCTT--------CCCCTATTATATATTATT------------------T------TCCTATTATATG-------------------------------------ATGC--C-AAAACTAAAG------------AGCATTTCTCCGATTTTCCCACAGAAGGTGCCCATTGACACGTCGCACTTCTTCTGGCTGGTCACCTACTTCCTGAA
droYak3 2L:3490526-3490918 - GCTACAGCTACCTGGTGGAGGAGCTGCACATGCAACTGCTTTCCAATGCGGTATGTTTATAGATTG--CTACAGAAAATG--TTATAAATACTACA------ATTGTCTTATTTCGATTTT-------------------CCTAATAACAAATGTAAACACACT--------------TTAACTTGAGACAGAACAAGGTGAAATTCATAAGAAACTTTTAGAT----------CTTTATTTTAAAACA-----------A--------------------TA--AGCTGCTTGTG---------------------------------------------------CA-AAATTTATTTTAATTTTTAATG--------------------------------------------------------------------------------------------------------AA--------------------------TT------TAT---------------------------------------------------------------------------------------------CAAGCTTAAA---GATGATTAG-----------------------TACACC--------TTCCTATTAT----TACT------------------TTATTTTTGCTAGAATATA-------------------------------------TTATCACA-AGACTAAAG------------AGCATTTTTCTGATTTCCCCACAGAAAGTGCCCATTGATACGTCGCACTTCTTCTGGCTGGTCACCTACTTCCTGAA
droEug1 scf7180000409554:2586392-2586719 + GCTACAGCTATCTGGTGGAGGAGCTTCACACCCAACTTCTGTCCAATGCGGTATGCGAAT--ATTA--CTATAATTAATA--TTATA-------TA------ATTGCCTAATTTTGTATTTGT-----------------TTT------------ATA-------TTTGTAAATTGTCACGAAACGAGACAGAACAAGGTGAAACTTATA-----------GATTTTTCTTTGGT-------------------------------------------------------------------------------------------------------------------------------------------------TTTC--------------------------------------------------------------------------------------------------------CTGCTCTGCTA-GATTTTTGGATG-------ATA-------TAAGCTTATCTTAGTTTTTAG---------------TTA-TAA------------------------------------------------------------------CAAATTGAAAAGTTTCAAAAAGCTAAGTC------------------TAT------------------------------------------------------------------------------------------------------------TTTATAATTCTCTCCAGAAGGTGCCCATTGACACATCGCACTTTTTCTGGCTGGTCACTTACTTCCTGAA
droBia1 scf7180000302261:1052225-1052388 - AATAGATTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTATATTATTTA---T--------------------AA------AG---TATA---------------------TTCCTCTT-----ACTACTATATTTGTAAA-TGCTTACATTTTATTTTATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTTTGAAATAC---------------------------------------------------------------------------------------------------------------------------------------------TATTATTCGTATTTCCTTCAGAAGGTGCCCATCGACACATCGCACTTTTTCTGGCTGGTCACCTACTTCCTGAA
droTak1 scf7180000415438:401788-401944 + GCTATAGCTATCTGGTGGAGGAGCTCCACATGCAACTGCTTTCCAATGCGGTAGGTGAAT--TTTA--CTAAAGAAAATT--TTATAAATTT--------------CCTAATTTGGGTTTTACAACATTTT---------TTTAA--------------------TGGCCAAAATATAATGAAATGAGACAGAACAAGGTGAAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490728:176085-176268 - GCTACAATTATCTAGTGGAGGAGCTACACACGCAACTGCTTTCCAATGCGGTAGGTAGCG--ATAA--TTCTAGATTTAA--TTAAA---TCTTCA------ATTGCCTAATTTTGTTTTA-------------------CTTAATGTCA---TTAAATTT---------AATTTATTACGAAATGGGGCAGAACAAGGTGAAATTTTTAACATATTTCTAT----------GCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTT------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779523:183029-183539 - GCTACAATTACCTGGTGGAGGAGCTCCACATGCAACTGCTTTCCAATGCGGTAGGTAGAC--ATTA--TTAGAGAAA-------------AATCCC------TTTGCCTAATTTTA-TTTA-------------------CTTAA--------------------TTGCCAATTTAAAACGAAATGGGGCAGAGCAAGGTGACATTTTTAATATGTTTCTAT----------GTTTATATTTAAAGTCATT-TTGAAATCATTTACAAGTTATAATCTATTGATGTACTGC---TAGAAGGAATGTATTTTATATATTTGT------ATTTAATCATTATAG-----CAAAACTTCCTTCT---GTATAATAAAATATCCTCAGCCCT--------------------------------------------------------------------------------------------------------------------------------------------------TCTTCTGCCTCTTTGCGGAAA---------------------------------------------AAACAAAACACGTTTAATTCCTTTTTTTCTG-----------CT-AAAAGTTT--------------------------------TCTTTGG--------------------------AGTACCATTAAAGTTTTAATATAATTTTATTTAATAATATATTTT--T-AAAATTCAAATGCACAATGTTAAACTATTTTTTTATTTGCCTCTAGAAGGTGCCCATTGATACGTCGCACTTTTTCTGGCTGGTCACGTACTTCCTGAA
droFic1 scf7180000453924:1487688-1488057 - GGTACAACTATCTGGTGGAGGAGCTCCACATGCAACTCCTTTCCAATGCGGTAAGTTTAA--AAAC--CCATAGATCATA--TAAGA----------------TTCTCTAATGATATCTTA-------------------CTTAA--------------------CTAACAAATTATAACGAAATGGGGCAGAACAAGGTGATTTGTT-------------------------------TTGTTTAATA-----------T--------------------GA--GGTTGCTGTTATG---------------------ATTTTGTT-----ATTGTTATTGCTATTGA-AACTTTCTTTTTATTTTTAATT--------------------------------------------------------------------------------------------------------AAATCTATATATCCCACCCT---------------------------------------------------T---------------------------------------------------------------------------------------------CCGGGAAAACCTTAAAATCCCTTTCC------------------CGTTTGGTTATTCTGTAATTTAATATCATATTTCATA------------------------------------------------------------------------------CCATTCCCAACAGAAGGTTCCAATTGATACGTCGCACTTCTTCTGGCTGGTGACGTATTTCCTGAA
droKik1 scf7180000302270:1138974-1139477 + GCTATAATTATCTGGTGGAGGAGCTGCACAGCCAGCTGCTGTCCAATGCGGTAGGTGATA--CTTC--TTGGAGATGTTTTTTTAGGA--AATGCC------TAAGACTTATTTTT-TATA------TTTT---------TTTGT-------TTATAA-----AA------ACC---TA-CAAATGATTCAGAACAAGGTGAAATTATGAATATTTATCAAG----------ATT-TTAA----AGTATTT-TTATAA-CA--------------------AA------AG---TACAAGAAATGTAGAATAT---------------------------------------------------------------------ATTGTTTTTAATTATCAGAAGTTTAACTTTTTAAATTATTTTCGATTTTAATTTTATTTTAAACAGTGTAATATTCGCTTGAAATTTTCAAAATAGAGTTATATATCTGCTCTTTTA-AATT---------------------------------------------------------------A-TAATAATTTAATTTATTAATTTTTAATTTTTTAAGTAAACAATTTTAAT---GAAATAAAATTTAATAAACCCCTAAAATACTTCACAAAACTAATCC------------------CAT---------------------------------------------------------------------------------------------------------------TACATTGCCCTCAGAAGGTGCCCATAGATACATCTCACTTTTTCTGGCTGGTCACATACTTCCTAAA
droAna3 scaffold_12916:5548984-5549375 - GATACAACTATTTGGTGGAGGAACTGCATCAGCAACTGCTCTCCAACGCGGTAGGTGGAT--TTTAAACCAAAGATGTC--------A--GATGCCAATTATGTTAC---------------CCATT----TTTATTTCA-------------------------TTGCCAAAT---AATCATGTGAGGCAGAATAAGGTGAAATTAATATT--------------------ATA-TTGA----AGTATATTTTATA---A--------------------AA------GG---TATAAGAACTGTAAGCTA----------------------------------------------------------------------AAAGCTTT-ACTTTTCT----------------CTTTA------------------------------------------------TTCAAAGTAATTTTAT------------------------GTATTTTGTGGCTTTTT------ACTTTTTCTGCCTCTTTAAAAGAAGTATTATCGAATATA----GACTAGTTTAGT----------------------TGAGTTTAGTTCCTTTGACTAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTGTCCCCAGAAGGTGCCCATTGATACCTCGCACTTCTTCTGGCTGGTCACGTACTTCTTGAA
droBip1 scf7180000396568:1289033-1289414 + GATACAACTATTTGGTGGAGGAACTGCATCAGCAACTGCTCTCCAATGCGGTAGGTGGAT--TTTAAACCAAAGATGTC--------A--GATGCCAATTATGTTAC---------------CCATT----TTTATTTCA-------------------------TTGCCAAAT---AATCATGTGAGGCAGAATAAGGTGAAATTAATATT--------------------ATA-TTGA----AGTATATTTTATA---A--------------------AA------GA---TACAAGAATTGTAAGCTA----------------------------------------------------------------------AAAGCTTTTACATTTCG-------------------------------------------------------------------------------------------------------------GTAGTTTGCGGCTTTTTCCTTTAACTTTATCTGCCTCTTTATTAAAAGTATTATCAGATATACATAGTTTAGTCTAGT----------------------TCAGTTTAGTTCCTTTGACTAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTGTCCCCAGAAGGTACCCATTGACACCTCGCACTTCTTCTGGCTGGTCACCTACTTCCTGAA
dp5 4_group3:5245622-5245711 + ATAACAAAAACATACACTAAGC--------------CTCTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTCAACAGCTACCCATTGACACGTCGCACTTTTTCTGGCTGGTCACGTACTTCCTAAA
droPer2 scaffold_1:6737511-6737567 + TCAACAGCTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCATTGACACGTCGCACTTTTTCTGGCTGGTCACGTACTTCCTGAA
droWil2 scf2_1100000004521:8976285-8976397 - GCTACAATTATTTGGTAGAAGAACTACACATTCAATTGCTATCAAATGCGGTAAGTTGAA--TTAA--------------------------------------------------------------------------------------------------------------------------------------GAATATCTA-------------GTCTAT-----------------------------------------------------AATT--------------------------------------------------------------------------------------------TACTTA------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTCCATCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTACAGAAAAT------------------------------------------------
droVir3 scaffold_12963:15280357-15280444 + C-TAGAGATATTTGCTTAAAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCTTTTTCACAGAAGATGCCCATTGATACATCGCATTTCTTCTGGCTTGTCACGTTCTTTCTCAA
droMoj3 scaffold_6500:18257205-18257267 + T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCCAAAAGGTTCTCATTGACACATCGCACTTCTTCTGGCTGGTCACGTTCTTTCTGAA
droGri2 scaffold_8317:2759-2833 - GATACAACTTTTTGGTGGAGGAGCTGCACTCTCAGCTATTATGTAATGCGGTAGGTGTAC--AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATAGAACTTAT-----------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTTACAGCTATCTGGTGGAGGAATTGCACATGCAACTGCTTTCCAATGCGGTATGTCGAG--ATTG--ATAATGAAATTA--TTATAAGTAC--------------TATAATTTCGATTTT-------------------CTTAAAAACAATTTTACACACACTA------ACT---AACTAATTGAGACAGAACAAGGTGAATTTTTG-------------ATTTAT-----------------------------------------------------GATG--------------------------------------------------------------------------------------------TGCTCATGCCTTTT-TA-------------------------------------------------------------------------------------------------------TATGTTTTT------TAT---------------------------------------------------------------------------------------------AAGGCTT--A---GTAGATTAGGTTCATTCTCTTTTAAAATACCTCACATA--------CTGCTTTTCT----TATT------------------TTAATTATGATATTATATA-------------------------------------GTATAATAAAAACTAAAG------------AGAACTTCTCGGA-TTTCCCTCAGAAGGTGCCCATTGACACATCGCACTTCTTCTGGCTGGTCACCTACTTCCTGAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................CACACTA------ACT---AACTAATTGAGACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2518.00880000000000000000
.............................................................................................................................................................ACACACTA------ACT---AACTAATTGAGACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.00430100000000000000
............................................................................................................................................................CACACACTA------ACT---AACTAATTGAGACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00220000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACTTCTCGGA-TTTCCCTC.......................................................2111.00110000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT---------------------------------------------------------------------------------------------AAGGCTT--A---GTAGATTAGG...........................................................................................................................................................................................................................................2111.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTTCTGGCTGGTCACC...........1911.00101000000000000000
.................................................................................................................................................................ACTA------ACT---AACTAATTGAGACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
........................TGCACATGCAACTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1560.17100000001000000000
droSec2
GTTACAGCTATCTGGTGGAGGAATTGCACATGCAACTGCTTTCCAATGCGGTATGTCGAT--ATTG--ATATAGAAATTA--TTATAAGTAC--------------TATAATTTCGATTTT-------------------CTTAATAACAAATTTACACACACTA------ACT---AACTAATTGAGACAGAACAAGGTGAATTTTTG-------------ATTTAT-----------------------------------------------------GATG--------------------------------------------------------------------------------------------TGCTCATACCTTTT-CA-------------------------------------------------------------------------------------------------------TATGTTTTT------TTTGAG---------------------------------------------------------------------------------------------GCTT--A---GTAGATTAGGTTCATTATCTTTTGAAATACCTCACATC--------TTGCTATTAT----TATT------------------TTAAATATGATATTATATA-------------------------------------TTATAATAAAAACTAAAG------------AGAACTTCTCGGATTTCCCTCCAGAAGGTGCCCATTGACACGTCGCATTTCTTCTGGCTGGTCACCTACTTCCTGAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGTGCCCATTGACACGTCG................................2211.0010100
GTTACAGCTATCTGGTGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGCCCATTGACACGTCGC...............................2111.0010001
..TACAGCTATCTGGTGGAGGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
................................................................................................................................................................CACTA------ACT---AACTAATTGAGACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGTGCCCATTGACACGTCGC...............................2311.0010100
..TACAGCTATCTGGTGGAGGAATTGCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
...........CTGGTGGAGGAATTGCACATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.......CTATCTGGTGGAGGAATTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT------TTTGAG---------------------------------------------------------------------------------------------GCTT--A---GTAGATTAGGT..........................................................................................................................................................................................................................................2511.0010100
........TATCTGGTGGAGGAATTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
dm3
GTTACAGCTATCTGGTGGAGGAACTGCACATGCAACTGCTTTCCAATGCGGTATGTCGAT--ATTG--ATATAGAAATTA--TTATGAGGAC--------------TATAATTTCGATTTT-------------------CTTAAAAACAAATTTACACACACTA------ACT---AACTAATTGAGACAGAACAAGGTGAATTTTTGT-----------CATTTAT-----------------------------------------------------GATG--------------------------------------------------------------------------------------------CGCTCATCGCTTTT-CA-------------------------------------------------------------------------------------------------------TATGTTTTTCGGAGG-------CTT-------A----------------------------------------------------------------------AAACTTAACAGGCTTAAA---GTAGATTAGGTTCATTATCTTTTGAAATACCTCACATC--------TTGCTATTAT----TATT------------------TTAATTATAATATTATATA-------------------------------------TTATCATAAAAACTAAAG------------AGAACTTCTCTGACTTTCCTCCAGAAGGTGCCCATTGACACATCGCACTTCTTCTGGCTGGTCACCTACTTCCTGAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................CACACACTA------ACT---AACTAATTGAGACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ACAGCTATCTGGTGGAGGAACTGCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GTTACAGCTATCTGGTGGAGGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000000
.............................................................................................................................................................ACACACTA------ACT---AACTAATTGAGACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GTTACAGCTATCTGGTGGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TACAGCTATCTGGTGGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CTTTT-CA-------------------------------------------------------------------------------------------------------TATGTTTTTCC......................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGGAGGAACTGCACATGCAACTGCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCTATCTGGTGGAGGAACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATTGACACATCGCACTT...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................CACACTA------ACT---AACTAATTGAGACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTACAGCTATCTGGTGGAGGAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTACAGCTATCTGGTGGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TCTGGTGGAGGAACTGCACATGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AGCTATCTGGTGGAGGAACTGCACATGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGGAGGAACTGCACATGCAACTGCTTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAG------------AGAACTTCTCTGACTTTCCT.........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........CTGGTGGAGGAACTGCACATGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCTATCTGGTGGAGGAACTGCACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTCTCTGACTTTCCTCCAG.....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TTTCCAATGCGGTATGTCGAT--....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GCTACAGCTATCTGGTGGAGGAACTGCACATTCAACTGCTTTCCAATGCGGTAAGCTTATAGATTG--CTATAGAA-TTA--TTATAAATACTGCA------ATTGTCTCATTTCGATTGT-------------------CCTAATAACAAATTGTAACACACTG---------------AACTCGAGACAGAACAAGGTGAAAATCATAAGAAACTTCTAGAT----------T-TTATTGTGCAACA-----------T--------------------GG--AGCTGCTTGTGAA---------------------ATTTT------------------------------------------------------------------AAATTAGCAATAGCTCCTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTTAAA---GTAGA-----CTCAATATCCTTTTAGATGCCACACCTT--------CCCCTATTATATATTATT------------------T------TCCTATTATATG-------------------------------------ATGC--C-AAAACTAAAG------------AGCATTTCTCCGATTTTCCCACAGAAGGTGCCCATTGACACGTCGCACTTCTTCTGGCTGGTCACCTACTTCCTGAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATTGACACGTCGCACTTCTTCTGG....................2816.0060000006
.CTACAGCTATCTGGTGGAGGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000110
.CTACAGCTATCTGGTGGAGGAACTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
.........................................................................................................................................................TGTAACACACTG---------------AACTCGAGACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTCTTCTGGCTGGTCACCTACT.......2611.0011000000
GCTACAGCTATCTGGTGGAGGAACTGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTGGCTGGTCACCTACTTCCT...2411.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGTGCCCATTGACACGTCGC...............................2311.0010000010
..TACAGCTATCTGGTGGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
......GCTATCTGGTGGAGGAACTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.CTACAGCTATCTGGTGGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACACGTCGCACTTCTTCTG.....................2311.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATTGACACGTCGCACTTCTTCT......................2611.0010000010
.CTACAGCTATCTGGTGGAGGAACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.CTACAGCTATCTGGTGGAGGAACTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
......GCTATCTGGTGGAGGAACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
......GCTATCTGGTGGAGGAACTGCACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
droYak3
GCTACAGCTACCTGGTGGAGGAGCTGCACATGCAACTGCTTTCCAATGCGGTATGTTTATAGATTG--CTACAGAAAATG--TTATAAATACTACA------ATTGTCTTATTTCGATTTT-------------------CCTAATAACAAATGTAAACACACT--------------TTAACTTGAGACAGAACAAGGTGAAATTCATAAGAAACTTTTAGAT----------CTTTATTTTAAAACA-----------A--------------------TA--AGCTGCTTGTG---------------------------------------------------CA-AAATTTATTTTAATTTTTAATG--------------------------------------------------------------------------------------------------------AA--------------------------TT------TAT---------------------------------------------------------------------------------------------CAAGCTTAAA---GATGATTAG-----------------------TACACC--------TTCCTATTAT----TACT------------------TTATTTTTGCTAGAATATA-------------------------------------TTATCACA-AGACTAAAG------------AGCATTTTTCTGATTTCCCCACAGAAAGTGCCCATTGATACGTCGCACTTCTTCTGGCTGGTCACCTACTTCCTGAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................GCACATGCAACTGCTTTCCAATGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00202000000000
......GCTACCTGGTGGAGGAGCTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATACGTCGCACTTCTTCTGGCTGGT...............2911.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACTTCTTCTGGCTGGTC..............2011.00110000000000
.CTACAGCTACCTGGTGGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCACTTCTTCTGGCTGGTCACCTAC........2811.00110000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATTGATACGTCGCACTTCTT........................2211.00110000000000
.....AGCTACCTGGTGGAGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
....................GAGCTGCACATGCAACTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.....................AGCTGCACATGCAACTGCTTTCCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCACTTCTTCTGGCTGGC...............2111.00110000000000
.....................................................................................................................................................................................................................................................AACA-----------A--------------------TA--AGCTGCTTGTG---------------------------------------------------CA-AAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATACGTCGCACTTCTTCTGGCTGGT...............2811.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTCGCACTTCTTCTGGCTGGTC..............2411.00100001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGTGCCCATTGATACGTCGC...............................2311.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATACGTCGCACTTCTTCTGGCTGGT...............2711.00101000000000
GCTACAGCTACCTGGTGGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..TACAGCTACCTGGTGGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
................GGAGGAGCTGCACATGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGTCGCACTTCTTCTGGC...................2111.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCACTTCTTCTGGCTGGG...............2111.00110000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGTCGCACTTCTTCTGGCT..................2211.00110000000000
.CTACAGCTACCTGGTGGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.........ACCTGGTGGAGGAGCTGCACATGCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCCCATTGATACGTCGCA..............................2111.00100000010000
droEug1
GCTACAGCTATCTGGTGGAGGAGCTTCACACCCAACTTCTGTCCAATGCGGTATGCGAAT--ATTA--CTATAATTAATA--TTATA-------TA------ATTGCCTAATTTTGTATTTGT-----------------TTT------------ATA-------TTTGTAAATTGTCACGAAACGAGACAGAACAAGGTGAAACTTATA-----------GATTTTTCTTTGGT-------------------------------------------------------------------------------------------------------------------------------------------------TTTC--------------------------------------------------------------------------------------------------------CTGCTCTGCTA-GATTTTTGGATG-------ATA-------TAAGCTTATCTTAGTTTTTAG---------------TTA-TAA------------------------------------------------------------------CAAATTGAAAAGTTTCAAAAAGCTAAGTC------------------TAT------------------------------------------------------------------------------------------------------------TTTATAATTCTCTCCAGAAGGTGCCCATTGACACATCGCACTTTTTCTGGCTGGTCACTTACTTCCTGAASizeHit CountTotal NormTotal
No Reads
droBia1
AATAGATTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTATATTATTTA---T--------------------AA------AG---TATA---------------------TTCCTCTT-----ACTACTATATTTGTAAA-TGCTTACATTTTATTTTATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTTTGAAATAC---------------------------------------------------------------------------------------------------------------------------------------------TATTATTCGTATTTCCTTCAGAAGGTGCCCATCGACACATCGCACTTTTTCTGGCTGGTCACCTACTTCCTGAASizeHit CountTotal NormTotal
No Reads
droTak1
GCTATAGCTATCTGGTGGAGGAGCTCCACATGCAACTGCTTTCCAATGCGGTAGGTGAAT--TTTA--CTAAAGAAAATT--TTATAAATTT--------------CCTAATTTGGGTTTTACAACATTTT---------TTTAA--------------------TGGCCAAAATATAATGAAATGAGACAGAACAAGGTGAAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GCTACAATTATCTAGTGGAGGAGCTACACACGCAACTGCTTTCCAATGCGGTAGGTAGCG--ATAA--TTCTAGATTTAA--TTAAA---TCTTCA------ATTGCCTAATTTTGTTTTA-------------------CTTAATGTCA---TTAAATTT---------AATTTATTACGAAATGGGGCAGAACAAGGTGAAATTTTTAACATATTTCTAT----------GCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTT------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GCTACAATTACCTGGTGGAGGAGCTCCACATGCAACTGCTTTCCAATGCGGTAGGTAGAC--ATTA--TTAGAGAAA-------------AATCCC------TTTGCCTAATTTTA-TTTA-------------------CTTAA--------------------TTGCCAATTTAAAACGAAATGGGGCAGAGCAAGGTGACATTTTTAATATGTTTCTAT----------GTTTATATTTAAAGTCATT-TTGAAATCATTTACAAGTTATAATCTATTGATGTACTGC---TAGAAGGAATGTATTTTATATATTTGT------ATTTAATCATTATAG-----CAAAACTTCCTTCT---GTATAATAAAATATCCTCAGCCCT--------------------------------------------------------------------------------------------------------------------------------------------------TCTTCTGCCTCTTTGCGGAAA---------------------------------------------AAACAAAACACGTTTAATTCCTTTTTTTCTG-----------CT-AAAAGTTT--------------------------------TCTTTGG--------------------------AGTACCATTAAAGTTTTAATATAATTTTATTTAATAATATATTTT--T-AAAATTCAAATGCACAATGTTAAACTATTTTTTTATTTGCCTCTAGAAGGTGCCCATTGATACGTCGCACTTTTTCTGGCTGGTCACGTACTTCCTGAASizeHit CountTotal NormTotal
No Reads
droFic1
GGTACAACTATCTGGTGGAGGAGCTCCACATGCAACTCCTTTCCAATGCGGTAAGTTTAA--AAAC--CCATAGATCATA--TAAGA----------------TTCTCTAATGATATCTTA-------------------CTTAA--------------------CTAACAAATTATAACGAAATGGGGCAGAACAAGGTGATTTGTT-------------------------------TTGTTTAATA-----------T--------------------GA--GGTTGCTGTTATG---------------------ATTTTGTT-----ATTGTTATTGCTATTGA-AACTTTCTTTTTATTTTTAATT--------------------------------------------------------------------------------------------------------AAATCTATATATCCCACCCT---------------------------------------------------T---------------------------------------------------------------------------------------------CCGGGAAAACCTTAAAATCCCTTTCC------------------CGTTTGGTTATTCTGTAATTTAATATCATATTTCATA------------------------------------------------------------------------------CCATTCCCAACAGAAGGTTCCAATTGATACGTCGCACTTCTTCTGGCTGGTGACGTATTTCCTGAASizeHit CountTotal NormTotal
No Reads
droKik1
GCTATAATTATCTGGTGGAGGAGCTGCACAGCCAGCTGCTGTCCAATGCGGTAGGTGATA--CTTC--TTGGAGATGTTTTTTTAGGA--AATGCC------TAAGACTTATTTTT-TATA------TTTT---------TTTGT-------TTATAA-----AA------ACC---TA-CAAATGATTCAGAACAAGGTGAAATTATGAATATTTATCAAG----------ATT-TTAA----AGTATTT-TTATAA-CA--------------------AA------AG---TACAAGAAATGTAGAATAT---------------------------------------------------------------------ATTGTTTTTAATTATCAGAAGTTTAACTTTTTAAATTATTTTCGATTTTAATTTTATTTTAAACAGTGTAATATTCGCTTGAAATTTTCAAAATAGAGTTATATATCTGCTCTTTTA-AATT---------------------------------------------------------------A-TAATAATTTAATTTATTAATTTTTAATTTTTTAAGTAAACAATTTTAAT---GAAATAAAATTTAATAAACCCCTAAAATACTTCACAAAACTAATCC------------------CAT---------------------------------------------------------------------------------------------------------------TACATTGCCCTCAGAAGGTGCCCATAGATACATCTCACTTTTTCTGGCTGGTCACATACTTCCTAAASizeHit CountTotal NormTotal
No Reads
droAna3
GATACAACTATTTGGTGGAGGAACTGCATCAGCAACTGCTCTCCAACGCGGTAGGTGGAT--TTTAAACCAAAGATGTC--------A--GATGCCAATTATGTTAC---------------CCATT----TTTATTTCA-------------------------TTGCCAAAT---AATCATGTGAGGCAGAATAAGGTGAAATTAATATT--------------------ATA-TTGA----AGTATATTTTATA---A--------------------AA------GG---TATAAGAACTGTAAGCTA----------------------------------------------------------------------AAAGCTTT-ACTTTTCT----------------CTTTA------------------------------------------------TTCAAAGTAATTTTAT------------------------GTATTTTGTGGCTTTTT------ACTTTTTCTGCCTCTTTAAAAGAAGTATTATCGAATATA----GACTAGTTTAGT----------------------TGAGTTTAGTTCCTTTGACTAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTGTCCCCAGAAGGTGCCCATTGATACCTCGCACTTCTTCTGGCTGGTCACGTACTTCTTGAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................CTGCTCTCCAACGCGGTAGGTGGAT--C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
......ACTATTTGGTGGAGGAACTGCATCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.....AACTATTTGGTGGAGGAACTGCATCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
GATACAACTATTTGGTGGAGGAACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
..TACAACTATTTGGTGGAGGAACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
droBip1
GATACAACTATTTGGTGGAGGAACTGCATCAGCAACTGCTCTCCAATGCGGTAGGTGGAT--TTTAAACCAAAGATGTC--------A--GATGCCAATTATGTTAC---------------CCATT----TTTATTTCA-------------------------TTGCCAAAT---AATCATGTGAGGCAGAATAAGGTGAAATTAATATT--------------------ATA-TTGA----AGTATATTTTATA---A--------------------AA------GA---TACAAGAATTGTAAGCTA----------------------------------------------------------------------AAAGCTTTTACATTTCG-------------------------------------------------------------------------------------------------------------GTAGTTTGCGGCTTTTTCCTTTAACTTTATCTGCCTCTTTATTAAAAGTATTATCAGATATACATAGTTTAGTCTAGT----------------------TCAGTTTAGTTCCTTTGACTAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTTGTCCCCAGAAGGTACCCATTGACACCTCGCACTTCTTCTGGCTGGTCACCTACTTCCTGAASizeHit CountTotal NormTotal
No Reads
dp5
ATAACAAAAACATACACTAAGC--------------CTCTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTTCAACAGCTACCCATTGACACGTCGCACTTTTTCTGGCTGGTCACGTACTTCCTAAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACGTCGCACTTTTTCTGGCTGGT...............2612.0020200000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTTTCTGGCTGGTCACGTAC........2311.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGCACTTTTTCTGGCT..................1911.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCCATTGACACGTCGCACT............................2211.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTTTTCTGGCTGGTCA.............2011.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACGTCGCACTTTTTCTGGCTG.................2411.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCCATTGACACGTCGC...............................1811.0010100000000
droPer2
TCAACAGCTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCATTGACACGTCGCACTTTTTCTGGCTGGTCACGTACTTCCTGAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACGTCGCACTTTTTCTGGCT..................2311.001010000
droWil2
GCTACAATTATTTGGTAGAAGAACTACACATTCAATTGCTATCAAATGCGGTAAGTTGAA--TTAA--------------------------------------------------------------------------------------------------------------------------------------GAATATCTA-------------GTCTAT-----------------------------------------------------AATT--------------------------------------------------------------------------------------------TACTTA------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTCCATCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTACAGAAAAT------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........ATTTGGTAGAAGAACTAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00330000
.......TTATTTGGTAGAAGAACTAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000
..........................CACATTCAATTGCTATCAAATGCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
droVir3
C-TAGAGATATTTGCTTAAAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCTTTTTCACAGAAGATGCCCATTGATACATCGCATTTCTTCTGGCTTGTCACGTTCTTTCTCAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGCTTGTCACGTTCTTTCTCA.2411.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCATTGATACATCGC...............................1811.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACATCGCATTTCTTCTGGCTTGT...............2611.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACATCGCATTTCTTCTGGCTTGTC..............2711.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCATTGATACATCGCAT.............................2011.001000000000000000000000000000000100000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCCATTGATACATCGCATTTCT.........................2511.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCCAAAAGGTTCTCATTGACACATCGCACTTCTTCTGGCTGGTCACGTTCTTTCTGAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACACATCGCACTTCTTCTGGCT..................2611.001000001
droGri2
GATACAACTTTTTGGTGGAGGAGCTGCACTCTCAGCTATTATGTAATGCGGTAGGTGTAC--AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATAGAACTTAT-----------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 10:58 AM