ID:

dsi_12680

 Coordinate:

3r:11711383-11711532 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.4 -10.4 -10.0 -10.0

Flybase annnotation

exon [3r_11711254_11711382_+]; CDS [3r_11711254_11711382_+]; intron [3r_11711383_11716563_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGGCGACTACTATGCCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAAAGTAGTGCTCAAAACAATTATTACAATAACAACACGTCGAGTAATTACCATCAAAACAAGAACAATAGCAACAACTATCAGCAGTTCTAAGTAGAGCTCAGCCGCATAAGCTGGCCAGCAACAAAATCAGAAAAAAAATAATCAAACAAAGCAAACAACAACAACCGCAGAACATAAAAA
*************************************************************...............................................((((........((......(((((.((((......)))).....))))).....))))))********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR902009
testis
 GSM343915
embryo
 O001
Testis
 SRR553488
RT_0-2 hours eggs
.................................................................................................................................................TATCAGCAGTTCTAAGTAGAGCTC................................................................................. 24 0 1 8.00 8 1 0 0 2 3 1 0 1 0 0 0 0 0
.........................................................................................................................................................GTTCTAAGTAGAGCTCAGCC............................................................................. 20 0 1 5.00 5 3 2 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TTCTAAGTAGAGCTCAGCCGCATAAGC..................................................................... 27 0 1 5.00 5 0 3 0 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................AAGTAGAGCTCAGCCGCATAAGCT.................................................................... 24 0 1 4.00 4 1 2 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AACTATCAGCAGTTCTAAGTAGAGCTC................................................................................. 27 0 1 4.00 4 2 0 0 0 2 0 0 0 0 0 0 0 0
..........................................................................................................................................................TTCTAAGTAGAGCTCAGCC............................................................................. 19 0 1 3.00 3 1 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................CAACTATCAGCAGTTCTAAGTAGAGC................................................................................... 26 0 1 3.00 3 0 0 0 1 0 1 0 0 0 0 0 0 1
......................TACTATAATGGATATGACTACGGT............................................................................................................................................................................................................ 24 0 1 3.00 3 0 0 1 0 1 0 0 0 1 0 0 0 0
.............................................................AAACAACAAAGTAGTGCTCAAAAC..................................................................................................................................................................... 24 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0
..........TATGCCGGCGGCTACTATAATGGA........................................................................................................................................................................................................................ 24 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0
.................................................................AACAAAGTAGTGCTCAAAACAATT................................................................................................................................................................. 24 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................CAACAAAGTAGTGCTCAAAAC..................................................................................................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................ATCAGCAGTTCTAAGTAGAGCTC................................................................................. 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TCAGCAGTTCTAAGTAGAGCTCAGC.............................................................................. 25 0 1 2.00 2 0 0 0 1 0 0 0 1 0 0 0 0 0
...........................................................................................................................................AACAACTATCAGCAGTTCTAAGTAGAGC................................................................................... 28 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0
..................................................................................................................................................ATCAGCAGTTCTAAGTAGA..................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......................TACTATAATGGATATGACTACGGTTAT......................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................AACAACAAAGTAGTGCTCAAAACAATT................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
......CTACTATGCCGGCGGCTA.................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCTAAGTAGAGCTCAGCCGCATAGAG..................................................................... 26 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................CATCAAAACAAGAACAATAGCAAC............................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CTAAGTAGAGCTCAGCCGCATAAGC..................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................CAGCAGTTCTAAGTAGAGCTCAGCC............................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................AGAGCTCAGCCGCATAAG...................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
..............................................................................................AATAACAACACGTCGAGTA......................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................ACAATTATTACAATAACAACACGTCGA............................................................................................................................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................CAGCAGTTCTCAGTAGAGCTCAG............................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................TATCAGCAGTTCTAAGTAAAGCT.................................................................................. 23 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................AAGTAGTGCTCAAAACAATTATTA............................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................TATCAGCAGTTCTAAGTAGAGCTCAG............................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.GGCGACTACTATGCCGGCGG..................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................AATGGATATGACTACGGTTATGGTAA.................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................AAGTAGTGCTCAAAA...................................................................................................................................................................... 15 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................AATAACAACACGTCGAGTAATTAC.................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTACAATAACAACACGTCGAGT.......................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TTCTAAGTAGAGCTCAGCCGCATA........................................................................ 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................TGAGTACCATCAAAACAAGAACC.................................................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TATTACAATAACAACACGTCGAGTA......................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..................CGGCTACTATAATGGATATGA................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................TACAACAAACAACAAAGTAGT.............................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................CAAAGTAGTGCTCAAAAC..................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................AGTAGAGCTCAGCCGCATAG....................................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.......TACTATGCCGGCGGCTACTATAATGGA........................................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................AACAAACAACAAAGTAGTGCTCAAAACA.................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................................................................CTAAGTAGAGCTCAGCCGCATAGAG..................................................................... 25 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................CAACAAAGTAGTGCTCAAAACAAT.................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................ATCAGCAGTTCTAAGTAGAGCTCAGCC............................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TTCTAAGTAGAGCTCAGCCGCATAG....................................................................... 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................TAAGTAGAGCTCAGCCGCATAAGCTGG.................................................................. 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................AAACAACAAAGTAGTGCC........................................................................................................................................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TAAGTAGAGCTCAGCCGCATAAGCT.................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................TAGAGCTCAGCCGCATAAGCTGGCCAG.............................................................. 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....GACTACTATGCCGGCGGC.................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................TATCAGCAGTTCTAAGTAGAGCTCAGC.............................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................AATTACCATCAAAACAAGAACAATAG................................................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCTAAGTAGAGCTCAGCC............................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................AAACAACAAAGTAGTGCTCAAAACAATT................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................AGTAGTGCTCAAAAC..................................................................................................................................................................... 15 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AACTATCAGCAGTTCTAAGTAGAGCT.................................................................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................AAGTAGTGCTCAAAACAATTA................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................TACAATAACAACACGTCGAGTAATTACC................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................ATCAGCAGTTCTAAGTAGAGCTCAGC.............................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................AGTTCTAAGTAGAGCTCAGC.............................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.....ACTACTATGCCGGCGG..................................................................................................................................................................................................................................... 16 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................AGTTCTAAGTAGAGCTCAGCC............................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................ACGGTTATGGTAAAT.................................................................................................................................................................................................. 15 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCTAAGTAGAGCTCAGCCGC........................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................ACAACTATCAGCAGTTCTAAGTAGAGC................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................TAATGGATATGACTACGGTTATGG....................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................ACGTCGAGTAATTACCATCAA.............................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCTAAGTAGAGCTCAGCCGCATAAGCT.................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TACCATCAAAACAAGAACAATAGCAAC............................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
........................................................................................................CGTCGAGTAATTACCATCAAAACAAGA....................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................ACAACAAAGTAGTGCTCAAAACA.................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................AGAGCTCAGCCGCATAAGCTGGCCAGCA............................................................ 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................GTAGAGCTCAGCCGCATAAGCTGGCC................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................AACAAAGTAGTGCTCAAAACA.................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................AAGTAGAGCTCAGCCGCATA........................................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GTTCTCAGTAGAGCT.................................................................................. 15 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................AAAAAAATAATAAAACGATGCAAA......................... 24 3 18 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................AACAGAATCAGAAAAA............................................. 16 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

ACCGCTGATGATACGGCCGCCGATGATATTACCTATACTGATGCCAATACCATTTATGTTGTTTGTTGTTTCATCACGAGTTTTGTTAATAATGTTATTGTTGTGCAGCTCATTAATGGTAGTTTTGTTCTTGTTATCGTTGTTGATAGTCGTCAAGATTCATCTCGAGTCGGCGTATTCGACCGGTCGTTGTTTTAGTCTTTTTTTTATTAGTTTGTTTCGTTTGTTGTTGTTGGCGTCTTGTATTTTT
*********************************************************************************...............................................((((........((......(((((.((((......)))).....))))).....))))))************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
.........................................................................................................................................................................................GTCGCGGTTTTAGTCTTTTTGTT.......................................... 23 3 2 0.50 1 1 0 0 0 0
....................................................................................GTTAGTAATGTTAGTGGTGTGC................................................................................................................................................ 22 3 2 0.50 1 0 1 0 0 0
......................................................................................................................................................................................................................................AGTTGGCGTCTTGTATTGT. 19 2 7 0.14 1 0 0 1 0 0
......................................................................................................................................................................................................................................TTTTGGCGTCTTGTAT.... 16 1 8 0.13 1 0 0 1 0 0
..................................................................................................................................................................................................TCAGTCGTTTTTTTATTA...................................... 18 2 20 0.10 2 2 0 0 0 0
...................................................................................................................................................................................................................................TGTTGTTTGCGACTTGAATTT.. 21 3 11 0.09 1 0 0 0 1 0
.........................................................................................................CAGCGCACTAATGGTAG................................................................................................................................ 17 2 17 0.06 1 0 0 1 0 0
..................................................................................................................................................GAGTGGTCAAGATTCA........................................................................................ 16 2 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:11711333-11711582 + dsi_12680 TGGCGACTACTATGCCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAA---AGTAGTGCTCAAAACAATTATTACAATAACAACACGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAGTAGAGCTC-AGC-----CGCATA-----------------------AG-----CTG-------------GCCAGCAACAA-----------AATCAGAAAAAA----------AA-TA--A------T----CAAACAAAGCAAAC--AACAACAA------------CCGCAGAACA----------------------TAAA-------------AA
droSec2 scaffold_0:12539127-12539376 + dse_502 TGGCGACTACTATGCCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAA---AGTAGTGCTCAAAACAATTATTACAATAACAACACGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAGTAGAGCTC-AGC-----CGCATA----------------------GAG-----CTG-------------GTCAGCAACAA-----------AATCAGAAAAAA-----------A-TA--A------T----CAAACAAAGCAAAC--AACAACAA------------CCGCAGAACA----------------------TAAA-------------AA
dm3 chr3R:9467815-9468070 - TGGCGACTACTATGCCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAA---AGTAGTGCTCAAAACAATTATTACAATAACAACACGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAGTAGAGCCTCAGC-----CGCATA----------------------GAGCTGGCCTG-------------GCCAGCAACAA-----------AATCAGAAAGAA-----------A-TA--A------T----CAAACAAAGCAAAC--AACAACAA------------CCGCAGAATA----------------------TAAA-------------AA
droEre2 scaffold_4770:12167507-12167760 + der_607 TGGCGACTACTATGCCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAA---AGTAGTGCTCAAAGCAATTATTACAATAACAACACGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAGTAGCGCTC-AGC-----CGTATA----------------------AAT-----CTG-------------G-CAGCAA-AAAA---------AATCAGAAAGAA-----------A-TA--A------TCAAGCAAACAAAGCAAGC--AACAACAA------------CCGCAGAACA----------------------TATA-------------AA
droYak3 3R:13776538-13776790 - dya_1031 TGGCGACTACTATGCCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAA---AGTAGTGCTCAAAGCAATTATTACAATAACAACACGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAGTAGAGCTC-AGC-----CGCATA----------------------AAG-----CTG-------------ACCAGCAA-AA-----------AATCAGAAAGAA-----------A-TA--A------TCAAGCAAACAAAGCAAAC--AACAACAA------------CCGCAGAACA----------------------TATA-------------AT
droEug1 scf7180000409802:507061-507332 + TGGCGACTACTATACCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAA---AGTAGTGCTCAAAACAATTATTACAATAACAACACGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTACCAGCAGTTCTAAGTAGAGCCT-AGC-----GGCAAA----------------------AAG-----CTG-------------GCTAGCAA-AAAAAATATCCAGAATCAGAAACAA-----------A----------------ACAAACAAAGCAAACCAAACAACAA------------CTGCAGAACA--------CCATA-CATATATATATA-------------AA
droBia1 scf7180000302402:2198203-2198453 - TGGCGACTACTATACCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAA---AGTAGTGCTCAGAACAATTATTACAATAACAACACGTC---GAGTAATTACCATCCAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAGTAGAGCCT-AGC-----CGCAAT----------------------CAG-----CAG-------------GCCAGCAA-AA-----------AATCAGAAACAA-----------A-AA---------ACAAGCAAACAAAGC------AACAACAA------------CCGCAAAACA--------CCA-----------TATA-------------AA
droTak1 scf7180000415380:267399-267650 - TGGCGACTACTATACCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAA---AGTAGTGCTCAAAACAATTATTACAATAACAACACGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAGTAGAGCCT-AGC-----CGCAAT----------------------CAG-----CAG-------------GCCAGCAA-AG-----------AATCAGAAACAA-----------A-AA--A------TCAAGCAAACAAAGC------AACAACAA------------CCGCAGAACA--------CCA-----------TATA-------------AA
droEle1 scf7180000491047:1729086-1729333 + TGGCGACTACTATTCCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAA---AGTAGTGCTCAAAACAATTATTACAATAACAACACGTC---GAGTAATTACCATCAAAACAAGA---ATAG---CAACAACTATCAGCAGTTCTAAGTAGAGCCT-AGC-----CACAAA----------------------AAG----AATG-------------GTCAGCAA--------------AATCAGAAAGAA-----------A-AA--T------ACAAGCAAACAAAGC------AACAACAA------------CCGCAGAACA--------CCA-----------TATA-------------AA
droRho1 scf7180000778106:15484-15735 + TGGCGACTACTATTCCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAA---AGTAGTGCTCAAAACAATTATTACAATAACAACACGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAGTAGAGCCT-AGC-----CACAAA----------------------AAG----ACTG-------------GCCAGCAA--------------AATCAGAAAGAA-----------AAAA--A------TCAAACAAACAAAGC------AACAACAA------------CCGCAAAACA--------CCA-----------TATA-------------AA
droFic1 scf7180000453906:28574-28821 + TGGCGACTACTATGCCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAAC---AA---AATAGTGCTCAAAACAATTATTACAATAACAACACGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAGTAGAGCCG-AGC-----CACAAA----------------------GAG----GCTG-------------GCCAGTAA-AA-----------AATCAGAAACAA-------------T---A------TCAAGCAAACAAAGC------AACAACAA------------CCGCAGTACA--------CCA-----------TATG-------------AA
droKik1 scf7180000302392:333410-333675 + TGGCGACTACTATACCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACCACAT---AATAATGCTCAAAACAATTATTACAATAACAACACGTC---GAGTAATTACCATCCAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAGTAG--TCT-AGC-----CGAAAAAA---AACAAACAAAAA-----CAG-----CTG-------------GCCAGCAA-AAGA---------AAACAAAAACAA-----------C-AA--CCTTAAATCAAGCAAACAAAGCA-AC--AACAACAC------------CTGCTGAATA-----------------------------------------
droAna3 scaffold_13340:2016472-2016710 - dan_2855 TGGCGACTACTACGCCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAAC---AT---AATAATGCTCAAAGCAACTATTACAATAACAATGCGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAAA-----TT-AGC-----CAA------------------------------------TAA--------------ACAA-AA------------AACA-AAACAAAAAATAAGGC-A-AACAA-----------AAAACAAATCAAGC--AACAAT--------------CCACAGAACA--------CC-------------ACA-------------AA
droBip1 scf7180000396712:2315336-2315564 + TGGCGACTACTATGCCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAAC---AT---AATAATGCTCAAAGCAACTATTACAATAACAATGCGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAAT------T-AGC-----CAA------------------------------------CAC-----------------ACAA-----------AAAGAGGCAGAA-----------A-TATAA-----------AAAACAAATCAAAC--AACAATAT------------CCACAGAACA--------CC--------------AC-------------AA
dp5 2:16906764-16906991 - dps_595 CGGCGACTACTATGCCGGTGGCTATTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAT---AATAATGCTCATAGCAACTATTACAATAACAACACGTC---GAGTAACTACCACCAAAACAAGAACAGTAGCAGCAACAACTACCAGCAGTTTTAAGTAG--------C-----CACAGT----------------------C-----------------------------CAC------------------------------------------------------C--ACAGA-CAGGC--AACACCAATCACAGCAACAAC-------CA--------CCA---GA-TTAATTATC-------------AA
droPer2 scaffold_13:1975138-1975186 + TGGTGGGGGCTACAACGGCGGCTCACATGGCGGACATGG---CGGTCATGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004943:6550631-6550895 - dwi_3317 CGGTGATTACTATACCGGTGGCTACTATAACGGATATGACTACGGTTATGGTAAATACAACAAACAACAT---AATAATGCTCATACCAATTATTACAATAACAACACGTCGTCAAGTAATTATCATCAGACCAAGAACAATAG---CAACAACTATCAGCAGTTTTAATTA-------AGTAAACATAAGTGTCGGGCATA--------ACCAA-----------TAACAACAACAACAACAGCAACAG-----------CAGCAACAACAA----------CA-TC--A------T----CAAATCACACAAT-----------------------CAACAGAAAA----------------------AAAA-------------AG
droVir3 scaffold_13047:9242005-9242248 - dvi_16116 TGCCGATTACTATGCCGGTGGCTACTATAATGGATATGACTATGGTTATGGTAAATACAACAAACAACAA---AATAATGCTCATAACAATTATTATAATAACACAACGTC---AAGTAATTATCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAA------TCT-AGC-----TAAATA----------------------CA--------G-----------------GCAACAA-----------AAG--------------------------------------CAAAC-----AAAC--AACCACAA------------CAACAATAAACAAAAATGCCATTA--------TA-CAACATTTTGAAACAA
droMoj3 scaffold_6540:31391933-31392181 + dmo_2143 TGCCGATTACTATGCCGGTGGCTACTATAATGGATATGACTATGGTTATGGTAAATACAACAAACAACAT---AATAATACTCATAACAATTATTACAATAACCCAACGTC---AAGTAACTATCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTTTAA-TA-----T-AGC-----CAAATGCAGGCAACA--------AACAA-----------T----------------GCAA-ATGA---------AAGCAAAAACAA-----------A-AA--CA--AAATCCAAC---------AAAC--AACAACTA------------CAACAATAAA----------------------CAAA-------------AA
droGri2 scaffold_14906:4003921-4004158 + TGCCGATTACTATGCCGGTGGCTACTATAATGGATATGACTATGGTTATGGTAAATACAACAAACAACATAATAATAATGCTCATAACAGTT--TATAATAACACAACGAC---AAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAATG------T-AGC-----TAAATA------------------------------CTG-------------GC----AACAA-----------AA---------------------------------------CAAACAAA-CATAC--AACAAGAACTA---------CAACAATAAACAAAAATGCCATTA--------TA-C-------------AA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGGCGACTACTATGCCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAA---AGTAGTGCTCAAAACAATTATTACAATAACAACACGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAGTAGAGCTC-AGC-----CGCATA-----------------------AG-----CTG-------------GCCAGCAACAA-----------AATCAGAAAAAA----------AA-TA--A------T----CAAACAAAGCAAAC--AACAACAA------------CCGCAGAACA----------------------TAAA-------------AASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................TATCAGCAGTTCTAAGTAGAGCTC-..................................................................................................................................................................................................................2418.00801000021103000000
..................................................................................................................................................................GTTCTAAGTAGAGCTC-AGC-----C.........................................................................................................................................................................................................2015.00503200000000000000
...................................................................................................................................................................TTCTAAGTAGAGCTC-AGC-----CGCATA-----------------------AG-----C.....................................................................................................................................................................2715.00500300020000000000
.......................................................................................................................................................................AAGTAGAGCTC-AGC-----CGCATA-----------------------AG-----CT....................................................................................................................................................................2414.00401210000000000000
.......................................................................................................................................................AACTATCAGCAGTTCTAAGTAGAGCTC-..................................................................................................................................................................................................................2714.00402000000002000000
...................................................................................................................................................................TTCTAAGTAGAGCTC-AGC-----C.........................................................................................................................................................................................................1913.00311100000000000000
......................................................................................................................................................CAACTATCAGCAGTTCTAAGTAGAGC.....................................................................................................................................................................................................................2613.00300000011010000000
......................TACTATAATGGATATGACTACGGT.......................................................................................................................................................................................................................................................................................................................................................2413.00300010000001010000
.............................................................AAACAACAA---AGTAGTGCTCAAAAC.............................................................................................................................................................................................................................................................................................................2412.00200010010000000000
..........TATGCCGGCGGCTACTATAATGGA...................................................................................................................................................................................................................................................................................................................................................................2412.00200000002000000000
.................................................................AACAA---AGTAGTGCTCAAAACAATT.........................................................................................................................................................................................................................................................................................................2412.00201000001000000000
................................................................CAACAA---AGTAGTGCTCAAAAC.............................................................................................................................................................................................................................................................................................................2112.00200200000000000000
...........................................................................................................................................................ATCAGCAGTTCTAAGTAGAGCTC-..................................................................................................................................................................................................................2312.00202000000000000000
............................................................................................................................................................TCAGCAGTTCTAAGTAGAGCTC-AGC-----..........................................................................................................................................................................................................2512.00200000010100000000
....................................................................................................................................................AACAACTATCAGCAGTTCTAAGTAGAGC.....................................................................................................................................................................................................................2812.00200000020000000000
...........................................................................................................................................................ATCAGCAGTTCTAAGTAGA.......................................................................................................................................................................................................................1911.00100010000000000000
......................TACTATAATGGATATGACTACGGTTAT....................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
..............................................................AACAACAA---AGTAGTGCTCAAAACAATT.........................................................................................................................................................................................................................................................................................................2711.00100000000000001000
......CTACTATGCCGGCGGCTA.............................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
....................................................................................................................................................................TCTAAGTAGAGCTC-AGC-----CGCATA-----------------------GA-----G.....................................................................................................................................................................2611.00100000000000010000
............................................................................................................................CATCAAAACAAGAACAATAG---CAAC..............................................................................................................................................................................................................................................2411.00101000000000000000
.....................................................................................................................................................................CTAAGTAGAGCTC-AGC-----CGCATA-----------------------AG-----C.....................................................................................................................................................................2511.00101000000000000000
.............................................................................................................................................................CAGCAGTTCTAAGTAGAGCTC-AGC-----C.........................................................................................................................................................................................................2511.00110000000000000000
...........................................................................................................................................................................AGAGCTC-AGC-----CGCATA-----------------------AG-----......................................................................................................................................................................1811.00100001000000000000
.................................................................................................AATAACAACACGTC---GAGTA..............................................................................................................................................................................................................................................................................1911.00100010000000000000
......................................................................................ACAATTATTACAATAACAACACGTC---GA.................................................................................................................................................................................................................................................................................2711.00100000010000000000
.....................................................................A---AGTAGTGCTCAAAACAATTATTA.....................................................................................................................................................................................................................................................................................................2411.00100000000100000000
..........................................................................................................................................................TATCAGCAGTTCTAAGTAGAGCTC-AG................................................................................................................................................................................................................2611.00100000000100000000
.GGCGACTACTATGCCGGCGG................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
............................AATGGATATGACTACGGTTATGGTAA...............................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
.....................................................................A---AGTAGTGCTCAAAA..............................................................................................................................................................................................................................................................................................................1511.00100000001000000000
.................................................................................................AATAACAACACGTC---GAGTAATTAC.........................................................................................................................................................................................................................................................................2411.00100010000000000000
.............................................................................................TTACAATAACAACACGTC---GAGT...............................................................................................................................................................................................................................................................................2211.00100010000000000000
...................................................................................................................................................................TTCTAAGTAGAGCTC-AGC-----CGCATA-----------------------.............................................................................................................................................................................2411.00100000001000000000
...........................................................................................TATTACAATAACAACACGTC---GAGTA..............................................................................................................................................................................................................................................................................2511.00100000000100000000
..................CGGCTACTATAATGGATATGA..............................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
.......................................................TACAACAAACAACAA---AGTAGT......................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
...................................................................CAA---AGTAGTGCTCAAAAC.............................................................................................................................................................................................................................................................................................................1811.00100010000000000000
........................................................................................................................................................................AGTAGAGCTC-AGC-----CGCATA-----------------------G............................................................................................................................................................................2011.00100000010000000000
.......TACTATGCCGGCGGCTACTATAATGGA...................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
..........................................................AACAAACAACAA---AGTAGTGCTCAAAACA............................................................................................................................................................................................................................................................................................................2811.00100000000000001000
.....................................................................................................................................................................CTAAGTAGAGCTC-AGC-----CGCATA-----------------------GA-----G.....................................................................................................................................................................2511.00100000000000010000
................................................................CAACAA---AGTAGTGCTCAAAACAAT..........................................................................................................................................................................................................................................................................................................2411.00100100000000000000
...........................................................................................................................................................ATCAGCAGTTCTAAGTAGAGCTC-AGC-----C.........................................................................................................................................................................................................2711.00100100000000000000
...................................................................................................................................................................TTCTAAGTAGAGCTC-AGC-----CGCATA-----------------------G............................................................................................................................................................................2511.00100000001000000000
......................................................................................................................................................................TAAGTAGAGCTC-AGC-----CGCATA-----------------------AG-----CTG-------------G.....................................................................................................................................................2711.00100000000001000000
.............................................................AAACAACAA---AGTAGTGCC...................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
......................................................................................................................................................................TAAGTAGAGCTC-AGC-----CGCATA-----------------------AG-----CT....................................................................................................................................................................2511.00101000000000000000
..........................................................................................................................................................................TAGAGCTC-AGC-----CGCATA-----------------------AG-----CTG-------------GCCAG.................................................................................................................................................2711.00100000000001000000
....GACTACTATGCCGGCGGC...............................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
..........................................................................................................................................................TATCAGCAGTTCTAAGTAGAGCTC-AGC-----..........................................................................................................................................................................................................2711.00100100000000000000
......................................................................................................................AATTACCATCAAAACAAGAACAATAG---..................................................................................................................................................................................................................................................2611.00100010000000000000
....................................................................................................................................................................TCTAAGTAGAGCTC-AGC-----C.........................................................................................................................................................................................................1811.00110000000000000000
.............................................................AAACAACAA---AGTAGTGCTCAAAACAATT.........................................................................................................................................................................................................................................................................................................2811.00101000000000000000
.........................................................................AGTAGTGCTCAAAAC.............................................................................................................................................................................................................................................................................................................1511.00100000010000000000
.......................................................................................................................................................AACTATCAGCAGTTCTAAGTAGAGCT....................................................................................................................................................................................................................2611.00100000000001000000
.....................................................................A---AGTAGTGCTCAAAACAATTA........................................................................................................................................................................................................................................................................................................2111.00100000010000000000
..............................................................................................TACAATAACAACACGTC---GAGTAATTACC........................................................................................................................................................................................................................................................................2811.00100000001000000000
...........................................................................................................................................................ATCAGCAGTTCTAAGTAGAGCTC-AGC-----..........................................................................................................................................................................................................2611.00101000000000000000
.................................................................................................................................................................AGTTCTAAGTAGAGCTC-AGC-----..........................................................................................................................................................................................................2011.00110000000000000000
.....ACTACTATGCCGGCGG................................................................................................................................................................................................................................................................................................................................................................................1611.00100000000001000000
.................................................................................................................................................................AGTTCTAAGTAGAGCTC-AGC-----C.........................................................................................................................................................................................................2111.00110000000000000000
.........................................ACGGTTATGGTAAAT.............................................................................................................................................................................................................................................................................................................................................1511.00100000010000000000
....................................................................................................................................................................TCTAAGTAGAGCTC-AGC-----CGC.......................................................................................................................................................................................................2011.00100010000000000000
.....................................................................................................................................................ACAACTATCAGCAGTTCTAAGTAGAGC.....................................................................................................................................................................................................................2711.00100000001000000000
...........................TAATGGATATGACTACGGTTATGG..................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
..........................................................................................................ACGTC---GAGTAATTACCATCAA...................................................................................................................................................................................................................................................................2111.00100010000000000000
....................................................................................................................................................................TCTAAGTAGAGCTC-AGC-----CGCATA-----------------------AG-----CT....................................................................................................................................................................2711.00101000000000000000
.........................................................................................................................TACCATCAAAACAAGAACAATAG---CAAC..............................................................................................................................................................................................................................................2711.00100000000000100000
...........................................................................................................CGTC---GAGTAATTACCATCAAAACAAGA............................................................................................................................................................................................................................................................2711.00100000000001000000
...............................................................ACAACAA---AGTAGTGCTCAAAACA............................................................................................................................................................................................................................................................................................................2311.00100100000000000000
...........................................................................................................................................................................AGAGCTC-AGC-----CGCATA-----------------------AG-----CTG-------------GCCAGCA...............................................................................................................................................2811.00100010000000000000
.........................................................................................................................................................................GTAGAGCTC-AGC-----CGCATA-----------------------AG-----CTG-------------GCC...................................................................................................................................................2611.00100100000000000000
.................................................................AACAA---AGTAGTGCTCAAAACA............................................................................................................................................................................................................................................................................................................2111.00100100000000000000
.......................................................................................................................................................................AAGTAGAGCTC-AGC-----CGCATA-----------------------.............................................................................................................................................................................2011.00100000010000000000
droSec2
TGGCGACTACTATGCCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAA---AGTAGTGCTCAAAACAATTATTACAATAACAACACGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAGTAGAGCTC-AGC-----CGCATA----------------------GAG-----CTG-------------GTCAGCAACAA-----------AATCAGAAAAAA-----------A-TA--A------T----CAAACAAAGCAAAC--AACAACAA------------CCGCAGAACA----------------------TAAA-------------AASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................AATGGATATGACTACGGTTATGGT.................................................................................................................................................................................................................................................................................................................................................2413.0030030
.............................ATGGATATGACTACGGTTATGGT.................................................................................................................................................................................................................................................................................................................................................2312.0020020
......................................................................................................CAACACGTC---GAGTAATTACCATC.....................................................................................................................................................................................................................................................................2311.0010100
....................................TGACTACGGTTATGGTAAAT.............................................................................................................................................................................................................................................................................................................................................2011.0010010
..............................................................................................................................................................................GCTC-AGC-----CGCATA----------------------GAG-----CTG-------------GTC...................................................................................................................................................2211.0010010
......................................................................................................CAACACGTC---GAGTAATTAC.........................................................................................................................................................................................................................................................................1911.0010010
............................AATGGATATGACTACGGTTAT....................................................................................................................................................................................................................................................................................................................................................2111.0010010
................................................................................................................................................................................................................................................................................................................AACAAAGCAAAC--AACAACAA------------CCGCA..............................................2511.0010010
.........................................................................................................................................................CTATCAGCAGTTCTAAGTAGAGCTC-..................................................................................................................................................................................................................2511.0010100
.......TACTATGCCGGCGGCTACTATA........................................................................................................................................................................................................................................................................................................................................................................2211.0010010
................................................................CAACAA---AGTAGTGCTCAAAACAATT.........................................................................................................................................................................................................................................................................................................2511.0010010
............................................................................................ATTACAATAACAACACGTC---GAGT...............................................................................................................................................................................................................................................................................2311.0010010
.............................ATGGATATGACTACGGTT......................................................................................................................................................................................................................................................................................................................................................1811.0010010
..........................ATAATGGATATGACTACGGTTATGGT.................................................................................................................................................................................................................................................................................................................................................2611.0010010
.............................................................................................................................................................CAGCAGTTCTAAGTAGAGCTC-AGC-----CGC.......................................................................................................................................................................................................2711.0010010
.................................................................AACAA---AGTAGTGCTCAAAAC.............................................................................................................................................................................................................................................................................................................2011.0010010
...........................................................................................................................................................................AGAGCTC-AGC-----CGCATA----------------------GAG-----CTG-------------GTC...................................................................................................................................................2511.0010010
..............................................................................................................................................................................GCTC-AGC-----CGCATA----------------------GAG-----CTG-------------GT....................................................................................................................................................2111.0010010
...............................................................ACAACAA---AGTAGTGCTCAAAACAATT.........................................................................................................................................................................................................................................................................................................2611.0010001
...........................................................................................................................................................................AGAGCTC-AGC-----CGCATA----------------------GAG-----CTG-------------GT....................................................................................................................................................2411.0010010
........................................................................................................................................................................AGTAGAGCTC-AGC-----CGCATA----------------------GA............................................................................................................................................................................2111.0010010
.................................................................AACAA---AGTAGTGCTCAAAA..............................................................................................................................................................................................................................................................................................................1911.0010010
.....................................................................................................................................................................CTAAGTAGAGCTC-AGC-----CGC.......................................................................................................................................................................................................1911.0010010
..............................................................................................................................................................................GCTC-AGC-----CGCATA----------------------GAG-----CTG-------------......................................................................................................................................................1911.0010010
.....................................................AATACAACAAACAACAA---AGT.........................................................................................................................................................................................................................................................................................................................2011.0010010
.........................................................................................................................................................................GTAGAGCTC-AGC-----CGCATA----------------------GAG-----CT....................................................................................................................................................................2311.0010010
..................................................................ACAA---AGTAGTGCTCAAAACAATTATT......................................................................................................................................................................................................................................................................................................2611.0010010
.....................................................................................................................................................................CTAAGTAGAGCTC-AGC-----CGCAT.....................................................................................................................................................................................................2111.0010010
..................................................................................................ATAACAACACGTC---GAGTAATTACC........................................................................................................................................................................................................................................................................2411.0010010
...................................................................................................................................................................TTCTAAGTAGAGCTC-AGC-----CGCA......................................................................................................................................................................................................2211.0010010
..............................................................................................................................................AG---CAACAACTATCAGCAGTT................................................................................................................................................................................................................................2011.0010010
......................................................................................................................................................................TAAGTAGAGCTC-AGC-----CGCATA----------------------GCT-----......................................................................................................................................................................2411.0010010
....................................................................................................................................................AACAACTATCAGCAGTTCTAAGTAGAGC.....................................................................................................................................................................................................................2811.0010100
......................................................................................................................AATTACCATCAAAACAAGA............................................................................................................................................................................................................................................................1911.0010010
.................................................................................................................................................................................................................................................CAGCAACAA-----------AATCAGAAAA......................................................................................................................1911.0010010
dm3
TGGCGACTACTATGCCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAA---AGTAGTGCTCAAAACAATTATTACAATAACAACACGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAGTAGAGCCTCAGC-----CGCATA----------------------GAGCTGGCCTG-------------GCCAGCAACAA-----------AATCAGAAAGAA-----------A-TA--A------T----CAAACAAAGCAAAC--AACAACAA------------CCGCAGAATA----------------------TAAA-------------AASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................TATTACAATAACAACACGTC---GAGTAAT............................................................................................................................................................................................................................................................................27128.00280000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100001000000002000000000000030509300000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................TACCATCAAAACAAGAACAATAG---CAAC..............................................................................................................................................................................................................................................27122.002200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000304011200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................AACTATCAGCAGTTCTAAGTAGAGC.....................................................................................................................................................................................................................25121.00210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000010000300000000000000000000000000000000000000000000423500000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................TACTATAATGGATATGACTACGGT.......................................................................................................................................................................................................................................................................................................................................................24120.00200000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010100000000000000000000000000000000000000000000000001000100000020000000010203100000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000001000002
..........................................................................................................................................................TATCAGCAGTTCTAAGTAGAGCCTCAGC-----..........................................................................................................................................................................................................28119.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000040206001000000000000000000000000000000000000000000000000000000000000000000100000000300000000000000000000100000
...........................................................................................TATTACAATAACAACACGTC---GAG................................................................................................................................................................................................................................................................................23119.00190000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000050000001000000000000000406000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TTCTAAGTAGAGCCTCAGC-----CGCATA----------------------..............................................................................................................................................................................25119.00190000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000400000000000000000000000000000000000000000000000001000000000000000406010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................TATTACAATAACAACACGTC---GAGTAA.............................................................................................................................................................................................................................................................................26118.00180000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000010030005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................ACTATCAGCAGTTCTAAGTAGAGCC....................................................................................................................................................................................................................25116.00160000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000002000000000000000000000000000000000000000000000000000000200000000000100000000000000000000000000000000100000000000000000000000000000000000000101000000400000000000000000100000000
......................................................................................................................................................................TAAGTAGAGCCTCAGC-----CGCATA----------------------GAGC..........................................................................................................................................................................26114.00140000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000200000000000000000000000000000000000000000000000000000000000000000000000000000010001311001000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000
.........................................................................................................................TACCATCAAAACAAGAACAATAG---CA................................................................................................................................................................................................................................................25114.00140000000000000000000000000000000000000000000000000000000000200000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010213210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................TATCAGCAGTTCTAAGTAGAGCCTCAG................................................................................................................................................................................................................27114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102000000000000000000000000000000000000000000000100000000000002000100000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000301000000000000000000000000
....................................................................................................................................................................TCTAAGTAGAGCCTCAGC-----CGCATA----------------------GAGC..........................................................................................................................................................................28113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000010205200000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................ACTATAATGGATATGACTACGGTTAT....................................................................................................................................................................................................................................................................................................................................................26112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TCTAAGTAGAGCCTCAGC-----CGCATA----------------------GA............................................................................................................................................................................26112.00120000000000000000000000000000000000000010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000100000200000201200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................TCAAAACAAGAACAATAG---CAACAACTA.........................................................................................................................................................................................................................................27112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000020206100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................AACTATCAGCAGTTCTAAGTAGAGCCTC..................................................................................................................................................................................................................28111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002701000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
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............................AATGGATATGACTACGGTTA.....................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................AGAGCCTCAGC-----CGCATA----------------------GAGCT.........................................................................................................................................................................2212.0020000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................TG-------------GCCAGCAACAA-----------AATCAGAAAGA.....................................................................................................................2412.0020000000000000000000000000000000000000000001000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................AAACAACAA---AGTAGTGCTCAA................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................GCATA----------------------GAGCTGGCCTG-------------GCC...................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010000000000000000000000000000
.........................................................................................................................................ACAATAG---CAACAACTATCAGCAGTTC...............................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................ACAA---AGTAGTGCTCAAAACAATTATTAC....................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................ACTATCAGCAGTTCTAAGTAGAG......................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
...................................................TAAATACAACAAACAACAA---AGTAGT......................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
....................................................................AA---AGTAGTGCTCAAAACAATTATTA.....................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................A---AGTAGTGCTCAAAACAATT.........................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................GAAAGAA-----------A-TA--A------T----CAAACAAAGCA............................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................AAAGCAAAC--AACAACAA------------CCGCAGAA...........................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................ACCATCAAAACAAGAACAATAG---CAACAAC...........................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................ACAATAG---CAACAACTATCAGCAGT.................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................ACGGTTATGGTAAATACAAC........................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................AATAACAACACGTC---GAGTAAT............................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................AGCCTCAGC-----CGCATA----------------------GAGC..........................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................CGCATA----------------------GAGCTGGCCTG-------------GCCA..................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................CAGCAGTTCTAAGTAGAGCCT...................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................ATATGACTACGGTTATGGCG................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................AACAACTATCAGCAGTTCTAAGTAGA.......................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................GAGCCTCAGC-----CGCATA----------------------GAGCT.........................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000
.......................................................................................................................................................................AAGTAGAGCCTCAGC-----CGCATA----------------------GAG...........................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TTCTAAGTAGAGCCTCAGC-----CGC.......................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000
.................................................................................................AATAACAACACGTC---GAGTA..............................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................AACAACTATCAGCAGTTCTAAGT..........................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................TAG---CAACAACTATCAGCA...................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................AATTACCATCAAAACAAGAACAATAG---CA................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................CAGCAGTTCTAAGTAGAGC.....................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AACAACAA---AGTAGTGCTCAAAAC.............................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................CCAGCAACAA-----------AATCAGAAA.......................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TAACAACACGTC---GAGTAATTACCATCA....................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................................................................................................................AGTAGAGCCTCAGC-----CGCATA----------------------GAGCT.........................................................................................................................................................................2512.0020000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................ATCAGCAGTTCTAAGTAGAGC.....................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................CTAAGTAGAGCCTCAGC-----CGCATA----------------------GA............................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................CTAAGTAGAGCCTCAGC-----CGCATA----------------------GAGCT.........................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TAGTGCTCAAAACAATTATT......................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................AACAACACGTC---GAGTAATTACCATC.....................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................TATAATGGATATGACTACGG........................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................ATCAGCAGTTCTAAGTAGAGCC....................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................CTCAAAACAATTATTACAATAAC..............................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................CAACACGTC---GAGTAATTACCAT......................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................CATCAAAACAAGAACAATAG---CA................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GACTACTATGCCGGCGGC...............................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................TAATGGATATGACTACGGTT......................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................CATA----------------------GAGCTGGCCTG-------------GCCAGCAAC.............................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................ACAACTATCAGCAGTTCTAAGTAGAGCCT...................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TTCTAAGTAGAGCCTCAGC-----CGCATA----------------------GAG...........................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................TAGAGCCTCAGC-----CGCATA----------------------GAGCTGGCCTG-------------GC....................................................................................................................................................3111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................CAGCAGTTCTAAGTAGAGCCTCAGC-----..........................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................AAACAAGAACAATAG---CAACAACTATC.......................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................CAACAAACAACAA---AGTAGTGCTCAAAA..............................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................AATCAGAAAGAA-----------A-TA--A------T----CAAACAAAGCA............................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATAATGGATATGACTACGGTTATT...................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................TACCATCAAAACAAGAACAA........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................C---GAGTAATTACCATCAAAAC................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................ACAA---AGTAGTGCTCAAAACAATTATT......................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................CAACACGTC---GAGTAATTAC.........................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................GTTCTAAGTAGAGCCTCAGC-----CGCA......................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................AACAA---AGTAGTGCTCAAAACAAT..........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ACTATGCCGGCGGCTACTATAAT......................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................AGCAGTTCTAAGTAGAGC.....................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................ACAAACAACAA---AGTAGTGCTCAAAACA............................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CGGTTATGGTAAATACAACAAA.....................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TATCAGCAGTTCTAAGTAG........................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................CCTCAGC-----CGCATA----------------------GAGCTGGCCTG-------------GC....................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ATAACAACACGTC---GAGTAATTACCATCA....................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................ACAA-----------AATCAGAAAGAA-----------A-T......................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AATGGATATGACTACGGTTATG...................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................AACAA---AGTAGTGCTCAAAACAATTATT......................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TCAGC-----CGCATA----------------------GAGCTGGCCTG-------------GC....................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TACAACAAACAACAA---AGTAGTGCTC..................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................CGCATA----------------------GAGCTGGCCTG-------------GCCAGCAAC.............................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ATTACCATCAAAACAAGA............................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................GAAAGAA-----------A-TA--A------T----CAAACAA................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ATTACCATCAAAACAAGAACAATAG---CA................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................AACAAAGCAAAC--AACAACA................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AACAACAA---AGTAGTGCTCAAA...............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................CAATTATTACAATAACAACACGTC---G..................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AATACAACAAACAACAA---AGTAGTGCTCAA................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................C---GAGTAATTACCATCAAAACAAGAACA.........................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................ACACGTC---GAGTAATTACCATCA....................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................A--A------T----CAAACAAAGCAAAC--AACAACAA------------CCGCA..............................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TGGCGACTACTATGCCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAA---AGTAGTGCTCAAAGCAATTATTACAATAACAACACGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAGTAGCGCTC-AGC-----CGTATA----------------------AAT-----CTG-------------G-CAGCAA-AAAA---------AATCAGAAAGAA-----------A-TA--A------TCAAGCAAACAAAGCAAGC--AACAACAA------------CCGCAGAACA----------------------TATA-------------AASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................AGTAGCGCTC-AGC-----CGTATA----------------------AAT-----CTG-------------G-CAGC................................................................................................................................................3018.0080000008
............................AATGGATATGACTACGGTTATGGT.................................................................................................................................................................................................................................................................................................................................................2414.0040000220
............................................................................................ATTACAATAACAACACGTC---GAGT...............................................................................................................................................................................................................................................................................2314.0040100300
.....................................................................................................................................................................CTAAGTAGCGCTC-AGC-----CGTAT.....................................................................................................................................................................................................2112.0020001010
.................................................................AACAA---AGTAGTGCTCAAAGC.............................................................................................................................................................................................................................................................................................................2012.0020001100
...................................................................................................................................................................TTCTAAGTAGCGCTC-AGC-----CGT.......................................................................................................................................................................................................2112.0020001010
...............................................................................................ACAATAACAACACGTC---GAGT...............................................................................................................................................................................................................................................................................2012.0020100100
...............................................................................................................................................................................................................................................................................................A--A------TCAAGCAAACAAAGCAAGC--.......................................................................2111.0010000010
...........................................................................................TATTACAATAACAACACGTC---GAGT...............................................................................................................................................................................................................................................................................2411.0011000000
......CTACTATGCCGGCGGCTACTAT.........................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
..............................................................................................TACAATAACAACACGTC---GAGTAAT............................................................................................................................................................................................................................................................................2411.0011000000
................................................................................................CAATAACAACACGTC---GAGT...............................................................................................................................................................................................................................................................................1911.0010001000
.....................................................................................................................................................................................................................................................AA-AAAA---------AATCAGAAAGAA-----------A-T......................................................................................................2011.0010000100
....................................................AAATACAACAAACAACAA---AGT.........................................................................................................................................................................................................................................................................................................................2111.0010001000
.......................................................................................................................................................AACTATCAGCAGTTCTAAGTAGC.......................................................................................................................................................................................................................2311.0010000010
...........................................................................................................................................................ATCAGCAGTTCTAAGTAGC.......................................................................................................................................................................................................................1911.0010000010
....................................................................................................................................................................TCTAAGTAGCGCTC-AGC-----CGTATA----------------------A.............................................................................................................................................................................2411.0010000100
............................................................CAAACAACAA---AGTAGTGCTCAAAGC.............................................................................................................................................................................................................................................................................................................2511.0011000000
......................................................................................................................................................................................................................................................A-AAAA---------AATCAGAAAGAA-----------A-T......................................................................................................1911.0010000010
........ACTATGCCGGCGGCTACTATAATGGAT..................................................................................................................................................................................................................................................................................................................................................................2711.0010100000
..............................................................................................................................................................................................ATA----------------------AAT-----CTG-------------G-CAGCAA-AAAA---------AATC............................................................................................................................2411.0010000010
...................................................................................................................................................................................................................................................................................................................AAAGCAAGC--AACAACAA------------CCGCAGAAC..........................................2611.0010100000
........................................................................................................ACACGTC---GAGTAATTACCATCAA...................................................................................................................................................................................................................................................................2311.0010100000
...............................................................ACAACAA---AGTAGTGCTCAAAGCAA...........................................................................................................................................................................................................................................................................................................2411.0011000000
..............................................................................................................................................................................................................................................................................................................................AACAACAA------------CCGCAGAACA----------------------TAT................2111.0010001000
..............................................................................................................................................AG---CAACAACTATCAGCAGTT................................................................................................................................................................................................................................2011.0010000100
...........................TAATGGATATGACTACGGT.......................................................................................................................................................................................................................................................................................................................................................1911.0010001000
....GACTACTATGCCGGCGGCTACTAT.........................................................................................................................................................................................................................................................................................................................................................................2411.0010010000
...........................................................................................................................................................................................CGTATA----------------------AAT-----CTG-------------G-CAGCAA-A............................................................................................................................................2011.0010000010
..............................................................AACAACAA---AGTAGTGCTCAAAGC.............................................................................................................................................................................................................................................................................................................2311.0011000000
....................................................................................................AACAACACGTC---GAGTAATTACCATC.....................................................................................................................................................................................................................................................................2511.0010000100
...............................GGATATGACTACGGTTATGGT.................................................................................................................................................................................................................................................................................................................................................2111.0010000100
..........................................................................................TTATTACAATAACAACACGT.......................................................................................................................................................................................................................................................................................2011.0010000010
..............................................................................................................................................................................................ATA----------------------AAT-----CTG-------------G-CAGCAA-AAAA---------................................................................................................................................2011.0010000100
...........................................................................................................................................................ATCAGCAGTTCTAAGTAGCGCTC-AGC-----..........................................................................................................................................................................................................2611.0010000100
...............................................................................................................................................................................................................................................................................................................AAACAAAGCAAGC--AACAACAA------------CC.................................................2311.0010100000
......................................................................................................................................................................TAAGTAGCGCTC-AGC-----CGTATA----------------------..............................................................................................................................................................................2111.0011000000
...........................................................................................................................................................ATCAGCAGTTCTAAGTAGCGCTC-AGC-----C.........................................................................................................................................................................................................2711.0010100000
.........................TATAATGGATATGACTACGGTTATGGT.................................................................................................................................................................................................................................................................................................................................................2711.0010000100
.............................ATGGATATGACTACGGTTATGGTAA...............................................................................................................................................................................................................................................................................................................................................2511.0010000010
.....................................................................................................................TAATTACCATCAAAACAAGAACAATAG---C.................................................................................................................................................................................................................................................2811.0011000000
...........................TAATGGATATGACTACGGTTATGGT.................................................................................................................................................................................................................................................................................................................................................2511.0010000010
...............................................ATGGTAAATACAACAAACAACAA---AGT.........................................................................................................................................................................................................................................................................................................................2611.0010000010
.......................................................TACAACAAACAACAA---AGTA........................................................................................................................................................................................................................................................................................................................1911.0011000000
.......................................................................................................................ATTACCATCAAAACAAGAACAATA......................................................................................................................................................................................................................................................2411.0010100000
..................................................................................................................................................................................................................................................................................................................CAAAGCAAGC--AACAACAA------------CCGCAGAAC..........................................2711.0010100000
....................................................AAATACAACAAACAACAA---AGTAGT......................................................................................................................................................................................................................................................................................................................2411.0010000100
........................................................................................................ACACGTC---GAGTAATTACCATCAAAACA...............................................................................................................................................................................................................................................................2711.0011000000
.....................................................................................................................................................................CTAAGTAGCGCTC-AGC-----CGTATA----------------------AAT-----CTG-------------......................................................................................................................................................2811.0010010000
.....................................................................................................................................................................CTAAGTAGCGCTC-AGC-----CGT.......................................................................................................................................................................................................1911.0010100000
....GACTACTATGCCGGCGGCTACT...........................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
.........................................................................................................................................ACAATAG---CAACAACTATCAGCAGTT................................................................................................................................................................................................................................2511.0010000100
......................................................................................................................................................................................................................................................................ATCAGAAAGAA-----------A-TA--A------TCAAGCA.....................................................................................2211.0010000010
...............................................................................................................................................................GCAGTTCTAAGTAGCGCTC-AGC-----C.........................................................................................................................................................................................................2311.0010100000
................................GATATGACTACGGTTATGGTAA...............................................................................................................................................................................................................................................................................................................................................2211.0010100000
droYak3
TGGCGACTACTATGCCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAA---AGTAGTGCTCAAAGCAATTATTACAATAACAACACGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAGTAGAGCTC-AGC-----CGCATA----------------------AAG-----CTG-------------ACCAGCAA-AA-----------AATCAGAAAGAA-----------A-TA--A------TCAAGCAAACAAAGCAAAC--AACAACAA------------CCGCAGAACA----------------------TATA-------------ATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................TCTAAGTAGAGCTC-AGC-----CGCATA----------------------AAG-----CT....................................................................................................................................................................2812.00200000020000
....................................................................................................................................................................TCTAAGTAGAGCTC-AGC-----CGCATA----------------------AAG-----......................................................................................................................................................................2612.00200000020000
..............................................................................................................................................AG---CAACAACTATCAGCAGTTCTAAGT..........................................................................................................................................................................................................................2612.00202000000000
.........................................................................................................................................ACAATAG---CAACAACTATCAGCAGT.................................................................................................................................................................................................................................2412.00200000020000
...............................................................................................ACAATAACAACACGTC---GAGT...............................................................................................................................................................................................................................................................................2012.00201000010000
............................AATGGATATGACTACGGTTATGGT.................................................................................................................................................................................................................................................................................................................................................2412.00200010010000
...........................................................................................................................................................ATCAGCAGTTCTAAGTAGAGCTC-..................................................................................................................................................................................................................2312.00200000020000
......................................................ATACAACAAACAACAA---AGTAGT......................................................................................................................................................................................................................................................................................................................2212.00200000020000
........................................................ACAACAAACAACAA---AGTAGT......................................................................................................................................................................................................................................................................................................................2012.00200000020000
....................................................AAATACAACAAACAACAA---AGT.........................................................................................................................................................................................................................................................................................................................2111.00100100000000
.................................................................................................................................................................................................................................G-------------ACCAGCAA-AA-----------AATCAGAAAGAA-----------A-T......................................................................................................2511.00100000010000
......................................................................................................................................................................TAAGTAGAGCTC-AGC-----CGCATA----------------------..............................................................................................................................................................................2111.00100000010000
..............................................................................................................................................................AGCAGTTCTAAGTAGAGCTC-..................................................................................................................................................................................................................2011.00101000000000
..........................................................................................................................ACCATCAAAACAAGAACAATAG---CAACAAC...........................................................................................................................................................................................................................................2911.00101000000000
........................................................................................................................................................................AGTAGAGCTC-AGC-----CGCATA----------------------AAG-----CT....................................................................................................................................................................2411.00100000010000
.....................................GACTACGGTTATGGTAAATACAACAAAC....................................................................................................................................................................................................................................................................................................................................2811.00101000000000
.....................................................................................................................................................................CTAAGTAGAGCTC-AGC-----CGCAT.....................................................................................................................................................................................................2111.00100000010000
........................................................................................AATTATTACAATAACAACACGT.......................................................................................................................................................................................................................................................................................2211.00101000000000
.....................................GACTACGGTTATGGTAAATAC...........................................................................................................................................................................................................................................................................................................................................2111.00100100000000
..............................................................AACAACAA---AGTAGTGCTCAAAGC.............................................................................................................................................................................................................................................................................................................2311.00100000010000
......................................................................................................................................................CAACTATCAGCAGTTCTAAGTAGAGCTC-..................................................................................................................................................................................................................2811.00100000010000
..........................................................................................................................................................................TAGAGCTC-AGC-----CGCATA----------------------AAG-----CTG-------------ACC...................................................................................................................................................2611.00100000010000
.........................................................................................................CACGTC---GAGTAATTACCATCAAAACAAGAA...........................................................................................................................................................................................................................................................3011.00100000010000
..............................................................................................................................................................................................................................................................................GAA-----------A-TA--A------TCAAGCAAACAAAGC.............................................................................2211.00100100000000
.............................ATGGATATGACTACGGTTATGGT.................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
................................................................CAACAA---AGTAGTGCTCAAAGCA............................................................................................................................................................................................................................................................................................................2211.00100100000000
...........................................................................................................................................................................AGAGCTC-AGC-----CGCATA----------------------AAG-----CT....................................................................................................................................................................2111.00100000010000
...........................................................................................TATTACAATAACAACACGTC---GAGTAAT............................................................................................................................................................................................................................................................................2711.00100000010000
...............................................................................................................................CAAAACAAGAACAATAG---CA................................................................................................................................................................................................................................................1911.00101000000000
.............................................................................GTGCTCAAAGCAATTATTACAAT.................................................................................................................................................................................................................................................................................................2311.00101000000000
..................................................................ACAA---AGTAGTGCTCAAAGC.............................................................................................................................................................................................................................................................................................................1911.00100100000000
....................................................................................................................................................................TCTAAGTAGAGCTC-AGC-----CGCAT.....................................................................................................................................................................................................2211.00100000010000
.......TACTATGCCGGCGGCTACTAT.........................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...............................GGATATGACTACGGTTATGGT.................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.......................................................................................................................................................................AAGTAGAGCTC-AGC-----CGCATA----------------------AAG-----CTG-------------ACC...................................................................................................................................................2911.00100000010000
..................................................................................................ATAACAACACGTC---GAGTAATTAC.........................................................................................................................................................................................................................................................................2311.00100000010000
.....................................................................A---AGTAGTGCTCAAAGCAATTA........................................................................................................................................................................................................................................................................................................2111.00110000000000
........................................................ACAACAAACAACAA---AGTAGTGCTCAAAGC.............................................................................................................................................................................................................................................................................................................2911.00100100000000
.....................................................................................................................................................................CTAAGTAGAGCTC-AGC-----CGCATA----------------------AAG-----CT....................................................................................................................................................................2711.00100000010000
...CGACTACTATGCCGGCGGCTA.............................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
........................................................ACAACAAACAACAA---AGTAGTGCT...................................................................................................................................................................................................................................................................................................................2311.00100000010000
.....................................................................................................................................................................................................................................................................................................................AGCAAAC--AACAACAA------------CCGCAGAAC..........................................2411.00101000000000
.......................................................................................................................................GAACAATAG---CAACAACTATCAGCAGT.................................................................................................................................................................................................................................2611.00100000010000
.....................................................................................AGCAATTATTACAATAACAACACGTC---G..................................................................................................................................................................................................................................................................................2711.00100000010000
.......................................................................................................................................................................AAGTAGAGCTC-AGC-----CGCATA----------------------AAG-----CT....................................................................................................................................................................2511.00101000000000
.....................................................................................................................................................................CTAAGTAGAGCTC-AGC-----CGC.......................................................................................................................................................................................................1911.00101000000000
........................................................................................................................................................................................................................................................................CAGAAAGAA-----------A-TA--A------TCAAGCAAACAA................................................................................2511.00100100000000
.....................................................................................................................................................................CTAAGTAGAGCTC-AGC-----CGCATA----------------------..............................................................................................................................................................................2211.00100000010000
.........................................................................................................................................................................GTAGAGCTC-AGC-----CGCATA----------------------AAG-----CT....................................................................................................................................................................2311.00101000000000
........................................................................................AATTATTACAATAACAACACGTC---...................................................................................................................................................................................................................................................................................2311.00100000010000
....................................................................................................................................................................................................................................................................................................................AAGCAAAC--AACAACAA------------CCGCA..............................................2111.00100010000000
.......................................................................................................................................................AACTATCAGCAGTTCTAAGTAGAGCT....................................................................................................................................................................................................................2611.00100000010000
...............................................................................................................................................................................................................................................ACCAGCAA-AA-----------AATCAGAAAGAA-----------A-T......................................................................................................2411.00100000010000
.......................................................................................................................................................................AAGTAGAGCTC-AGC-----CGCATA----------------------AA............................................................................................................................................................................2211.00100000010000
............................AATGGATATGACTACGGTTAT....................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..............................................................................................TACAATAACAACACGTC---GAGT...............................................................................................................................................................................................................................................................................2111.00100000010000
..............................................................................................................................................................................GCTC-AGC-----CGCATA----------------------AAG-----CT....................................................................................................................................................................1811.00100000100000
..............................................................................................................................................AG---CAACAACTATCAGCAGTT................................................................................................................................................................................................................................2011.00100010000000
..........................................................................................................................................................................................................................................................................................................................AC--AACAACAA------------CCGCAGAACA----------------------TAT................2311.00101000000000
..................................................................................................................................AACAAGAACAATAG---CAACAACT..........................................................................................................................................................................................................................................2211.00101000000000
................................................................................................................................................................................................................................TG-------------ACCAGCAA-AA-----------AATCAGAAAGAA-----------A-T......................................................................................................2611.00100000010000
...........................................................................................................................................AATAG---CAACAACTATCAGCAGTTCC..............................................................................................................................................................................................................................2511.00100100000000
.........................................................................................ATTATTACAATAACAACACGT.......................................................................................................................................................................................................................................................................................2111.00100000010000
.....................................................................................................................................................................CTAAGTAGAGCTC-AGC-----CGCATA----------------------AAG-----C.....................................................................................................................................................................2611.00101000000000
........................................................................................AATTATTACAATAACAACACGTC---GAGT...............................................................................................................................................................................................................................................................................2711.00100000010000
......................................................................................................................................................................TAAGTAGAGCTC-AGC-----CGCATA----------------------AAG-----CT....................................................................................................................................................................2611.00100100000000
..................................................................ACAA---AGTAGTGCTCAAAGCA............................................................................................................................................................................................................................................................................................................2011.00100010000000
droEug1
TGGCGACTACTATACCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAA---AGTAGTGCTCAAAACAATTATTACAATAACAACACGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTACCAGCAGTTCTAAGTAGAGCCT-AGC-----GGCAAA----------------------AAG-----CTG-------------GCTAGCAA-AAAAAATATCCAGAATCAGAAACAA-----------A----------------ACAAACAAAGCAAACCAAACAACAA------------CTGCAGAACA--------CCATA-CATATATATATA-------------AASizeHit CountTotal NormTotal
No Reads
droBia1
TGGCGACTACTATACCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAA---AGTAGTGCTCAGAACAATTATTACAATAACAACACGTC---GAGTAATTACCATCCAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAGTAGAGCCT-AGC-----CGCAAT----------------------CAG-----CAG-------------GCCAGCAA-AA-----------AATCAGAAACAA-----------A-AA---------ACAAGCAAACAAAGC------AACAACAA------------CCGCAAAACA--------CCA-----------TATA-------------AASizeHit CountTotal NormTotal
No Reads
droTak1
TGGCGACTACTATACCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAA---AGTAGTGCTCAAAACAATTATTACAATAACAACACGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAGTAGAGCCT-AGC-----CGCAAT----------------------CAG-----CAG-------------GCCAGCAA-AG-----------AATCAGAAACAA-----------A-AA--A------TCAAGCAAACAAAGC------AACAACAA------------CCGCAGAACA--------CCA-----------TATA-------------AASizeHit CountTotal NormTotal
No Reads
droEle1
TGGCGACTACTATTCCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAA---AGTAGTGCTCAAAACAATTATTACAATAACAACACGTC---GAGTAATTACCATCAAAACAAGA---ATAG---CAACAACTATCAGCAGTTCTAAGTAGAGCCT-AGC-----CACAAA----------------------AAG----AATG-------------GTCAGCAA--------------AATCAGAAAGAA-----------A-AA--T------ACAAGCAAACAAAGC------AACAACAA------------CCGCAGAACA--------CCA-----------TATA-------------AASizeHit CountTotal NormTotal
No Reads
droRho1
TGGCGACTACTATTCCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAA---AGTAGTGCTCAAAACAATTATTACAATAACAACACGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAGTAGAGCCT-AGC-----CACAAA----------------------AAG----ACTG-------------GCCAGCAA--------------AATCAGAAAGAA-----------AAAA--A------TCAAACAAACAAAGC------AACAACAA------------CCGCAAAACA--------CCA-----------TATA-------------AASizeHit CountTotal NormTotal
No Reads
droFic1
TGGCGACTACTATGCCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAAC---AA---AATAGTGCTCAAAACAATTATTACAATAACAACACGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAGTAGAGCCG-AGC-----CACAAA----------------------GAG----GCTG-------------GCCAGTAA-AA-----------AATCAGAAACAA-------------T---A------TCAAGCAAACAAAGC------AACAACAA------------CCGCAGTACA--------CCA-----------TATG-------------AASizeHit CountTotal NormTotal
No Reads
droKik1
TGGCGACTACTATACCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAACCACAT---AATAATGCTCAAAACAATTATTACAATAACAACACGTC---GAGTAATTACCATCCAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAGTAG--TCT-AGC-----CGAAAAAA---AACAAACAAAAA-----CAG-----CTG-------------GCCAGCAA-AAGA---------AAACAAAAACAA-----------C-AA--CCTTAAATCAAGCAAACAAAGCA-AC--AACAACAC------------CTGCTGAATA-----------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TGGCGACTACTACGCCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAAC---AT---AATAATGCTCAAAGCAACTATTACAATAACAATGCGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAAA-----TT-AGC-----CAA------------------------------------TAA--------------ACAA-AA------------AACA-AAACAAAAAATAAGGC-A-AACAA-----------AAAACAAATCAAGC--AACAAT--------------CCACAGAACA--------CC-------------ACA-------------AASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................................................................................................................................AAGC--AACAAT--------------CCACAGAACA--------CC-------------AC................2412.002020000
............................................................................................................................................................................................................................................................................................A-AACAA-----------AAAACAAATCAAGC--AACA...................................................................2412.002020000
.................................................................................................................................................................................................................................................................................................AA-----------AAAACAAATCAAGC--AAC....................................................................1912.002020000
............................................................................................................................................................................................................................................................................AACAAAAAATAAGGC-A-AAC....................................................................................................1912.002020000
.........................................................................................................................TACCATCAAAACAAGAACAATAG---CAAC..............................................................................................................................................................................................................................................2711.001010000
...........................TAATGGATATGACTACGGTTATGGT.................................................................................................................................................................................................................................................................................................................................................2511.001000010
................................................................................................................................................................CAGTTCTAAAA-----TT-AGC-----CAA------------------------------------TAA--------------AC................................................................................................................................................2411.001010000
..............................................................................................TACAATAACAATGCGTC---GAGTAATT...........................................................................................................................................................................................................................................................................2511.001010000
.......................................CTACGGTTATGGTAAATAC...........................................................................................................................................................................................................................................................................................................................................1911.001010000
..............................................................................................................................................AG---CAACAACTATCAGCAGTT................................................................................................................................................................................................................................2011.001001000
....................................................................................................AACAATGCGTC---GAGTAATTACC........................................................................................................................................................................................................................................................................2211.001000010
................GGCGGCTACTATAATGGA...................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.....................................................................................................................................................................................................................................................................................................................ATCAAGC--AACAAT--------------CCACAGAACA--------CC-------------..................2511.001010000
............................................................................................ATTACAATAACAATGCGTC---GT.................................................................................................................................................................................................................................................................................2111.001000010
..................................................................................................................................................................................................................................................................................................................CAAATCAAGC--AACAAT--------------CCACAGA............................................2311.001010000
..........................................................................................................................................................................................................................................................................................................................GC--AACAAT--------------CCACAGAACA--------CC-------------ACA-------------..2311.001010000
..................................................................................................................................................................................................................................................................................................A-----------AAAACAAATCAAGC--AACAAT--------------C..................................................2211.001010000
..........................................................................................................................................CAATAG---CAACAACTATCAGC....................................................................................................................................................................................................................................2011.001010000
.........................................................................................................................................................................................................................................................................................GC-A-AACAA-----------AAAACAAATCAAGC--.......................................................................2211.001010000
......................................................................................................................................................................TAAAA-----TT-AGC-----CAA------------------------------------TAA--------------ACAA-A............................................................................................................................................2111.001010000
...............................................................................................ACAATAACAATGCGTC---GAGT...............................................................................................................................................................................................................................................................................2011.001010000
......................................................................................................................................................................................................................................................................................................................TCAAGC--AACAAT--------------CCACAGAACA--------CC-------------AC................2611.001010000
.......................................................................................CAACTATTACAATAACAATGCGTC---GAGT...............................................................................................................................................................................................................................................................................2811.001010000
................GGCGGCTACTATAATGGATATGAC.............................................................................................................................................................................................................................................................................................................................................................2411.001010000
...........................................................................................TATTACAATAACAATGCGTC---GA.................................................................................................................................................................................................................................................................................2211.001000010
.......................................................................................................................................................................................................................................................................................................................CAAGC--AACAAT--------------CCACAGAAC..........................................2011.001010000
......................................................ATACAACAAAC---AT---AATAAT......................................................................................................................................................................................................................................................................................................................1911.001010000
.............................ATGGATATGACTACGGTTATGGC.................................................................................................................................................................................................................................................................................................................................................2311.001010000
.......................................................................................................................................................................................................................................................................ACA-AAACAAAAAATAAGGC-A-.......................................................................................................2011.001010000
....................................................................................................................................................................................................................................................................................ATAAGGC-A-AACAA-----------AAAACAAATCAAGC--.......................................................................2711.001010000
........................................TACGGTTATGGTAAATACAACAAAC---.................................................................................................................................................................................................................................................................................................................................2511.001010000
.................................................................................................................................................................................................................................................................................................................................AAT--------------CCACAGAACA--------CC-------------ACA-------------AA2011.001010000
....GACTACTACGCCGGCGGCTA.............................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.......................................................................................................................................................................................................................................................................................................................CAAGC--AACAAT--------------CCACAGAACA--------CC-------------AC................2511.001010000
........................................................................................AACTATTACAATAACAATGCGTC---GAGT...............................................................................................................................................................................................................................................................................2711.001010000
.............................................................................................................................................................CAGCAGTTCTAAAA-----TT-AGC-----..........................................................................................................................................................................................................1911.001010000
............................................................................................ATTACAATAACAATGCGTC---GAGT...............................................................................................................................................................................................................................................................................2311.001010000
....GACTACTACGCCGGCGGCTACT...........................................................................................................................................................................................................................................................................................................................................................................2211.001001000
.....................................................................................................ACAATGCGTC---GAGTAATTACCATCA....................................................................................................................................................................................................................................................................2511.001010000
.........................................................................................................TGCGTC---GAGTAATTACCATCAAAAC................................................................................................................................................................................................................................................................2511.001010000
............................................................................................ATTACAATAACAATGCGTC---GAGC...............................................................................................................................................................................................................................................................................2311.001010000
....GACTACTACGCCGGCGGCT..............................................................................................................................................................................................................................................................................................................................................................................1911.001001000
................................................................................................................................................................................................................................................................................................................AACAAATCAAGC--AACAAT--------------CCACAGAACA--------C................................2911.001010000
...........................................................................................TATTACAATAACAATGCGTC---GAGT...............................................................................................................................................................................................................................................................................2411.001010000
...............................................................................................................................CAAAACAAGAACAATAG---CAACAACT..........................................................................................................................................................................................................................................2511.001010000
................................................................................................................................................................................................................................................................................................................AACAAATCAAGC--AACAAT--------------CC.................................................2011.001010000
.....................................................................................................................................AAGAACAATAG---CAACAACT..........................................................................................................................................................................................................................................1911.001010000
............................................................................................ATTACAATAACAATGCGTC---...................................................................................................................................................................................................................................................................................1911.001010000
..............................................................................................................................................................................................................................................................................CAAAAAATAAGGC-A-AACAA-----------AAAAC..................................................................................2411.001010000
................................................................................................................................................................................................................................................................................................................AACAAATCAAGC--AACAAT--------------CCACA..............................................2311.001010000
....GACTACTACGCCGGCGGCTAC............................................................................................................................................................................................................................................................................................................................................................................2111.001001000
...........................................................................................................................................................ATCAGCAGTTCTAAAA-----TT-AGC-----C.........................................................................................................................................................................................................2211.001010000
...................................................................................................................................................................................................................................................................................................................AAATCAAGC--AACAAT--------------CCACA..............................................2011.001000010
....GACTACTACGCCGGCGGCTACTATAAT......................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.....................................................................................................................................................................CTAAAA-----TT-AGC-----CAA------------------------------------TAA--------------AC................................................................................................................................................1911.001010000
.............................................................AAAC---AT---AATAATGCTCAAAGCAACT.........................................................................................................................................................................................................................................................................................................2511.001010000
.............................ATGGATATGACTACGGTTATGGT.................................................................................................................................................................................................................................................................................................................................................2311.001000001
.............................................................................................................................................................................................A------------------------------------TAA--------------ACAA-AA------------AACA-AAACACC...................................................................................................................21200.051010000
droBip1
TGGCGACTACTATGCCGGCGGCTACTATAATGGATATGACTACGGTTATGGTAAATACAACAAAC---AT---AATAATGCTCAAAGCAACTATTACAATAACAATGCGTC---GAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAAAT------T-AGC-----CAA------------------------------------CAC-----------------ACAA-----------AAAGAGGCAGAA-----------A-TATAA-----------AAAACAAATCAAAC--AACAATAT------------CCACAGAACA--------CC--------------AC-------------AASizeHit CountTotal NormTotal
No Reads
dp5
CGGCGACTACTATGCCGGTGGCTATTATAATGGATATGACTACGGTTATGGTAAATACAACAAACAACAT---AATAATGCTCATAGCAACTATTACAATAACAACACGTC---GAGTAACTACCACCAAAACAAGAACAGTAGCAGCAACAACTACCAGCAGTTTTAAGTAG--------C-----CACAGT----------------------C-----------------------------CAC------------------------------------------------------C--ACAGA-CAGGC--AACACCAATCACAGCAACAAC-------CA--------CCA---GA-TTAATTATC-------------AASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................AACAACACGTC---GAGTAACTAC.........................................................................................................................................................................................................................................................................2112.0020110000000
.................................................................................................AATAACAACACGTC---GAGTAACTACCA.......................................................................................................................................................................................................................................................................2612.0020200000000
.......................ATTATAATGGATATGACTACGGTT......................................................................................................................................................................................................................................................................................................................................................2412.0020200000000
..............................................................................................................................................................................................AGT----------------------C-----------------------------CAC------------------------------------------------------C--ACAGA-CAGGC--.......................................................................1811.0010100000000
.............................................................AAACAACAT---AATAATGCTCATAGCA............................................................................................................................................................................................................................................................................................................2511.0010010000000
................................................................................................................................................................................................................................................................................................................................CACCAATCACAGCAACAAC-------CA--------CCA---GA-TTA.....................2911.0010100000000
..............................................................................................................................................AGCAGCAACAACTACCAGCAGT.................................................................................................................................................................................................................................2211.0010100000000
...................................................................................................................................................................................................................................................................................................................AGA-CAGGC--AACACCAATCACA..........................................................2111.0010100000000
.......TACTATGCCGGTGGCTATTAT.........................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
..............................................................................................................................................................................................AGT----------------------C-----------------------------CAC------------------------------------------------------C--ACAGA-CAGGC--A......................................................................1911.0010100000000
....................................................................................................AACAACACGTC---GAGTAACTACCAC......................................................................................................................................................................................................................................................................2411.0010010000000
...........................................................................................................................................................................AG--------C-----CACAGT----------------------C-----------------------------CAC------------------------------------------------------C--ACAGA-CAG...........................................................................2211.0010010000000
..............................................................................................................................................AGCAGCAACAACTACCAGCAGTTTTAAGT..........................................................................................................................................................................................................................2911.0010010000000
....................................................................................................AACAACACGTC---GAGTAACTACCACC.....................................................................................................................................................................................................................................................................2511.0010010000000
............................AATGGATATGACTACGGTTATGGTA................................................................................................................................................................................................................................................................................................................................................2511.0010000100000
......................................................................................................CAACACGTC---GAGTAACTACCACC.....................................................................................................................................................................................................................................................................2311.0010100000000
..........................................................................................................................................................................TAG--------C-----CACAGT----------------------C-----------------------------CAC------------------------------------------------------C--ACAGA-CAGGC--AAC....................................................................2811.0010010000000
....................................................................................................................................................................TTTAAGTAG--------C-----CACAGT----------------------C-----------------------------CAC------------------------------------------------------C--ACAGA-..............................................................................2611.0010100000000
....................................................AAATACAACAAACAACAT---AATA........................................................................................................................................................................................................................................................................................................................2211.0010100000000
..........................ATAATGGATATGACTACGGTT......................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................................................................................................................................AGAACAGTAGCAGCAACAACTACCAGC....................................................................................................................................................................................................................................2711.0010100000000
...............................................................................................................................................................................................................................................................................................................................ACACCAATCACAGCAACAAC-------CA--------CCA---GA-TT......................2911.0010100000000
..............................................................AACAACAT---AATAATGCTCATAGCAACTAT.......................................................................................................................................................................................................................................................................................................2911.0010010000000
........................................................................................................................CTACCACCAAAACAAGAACAGT.......................................................................................................................................................................................................................................................2211.0010010000000
....................................................AAATACAACAAACAACAT---AAT.........................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................................................................................................................................AGAACAGTAGCAGCAACAAC...........................................................................................................................................................................................................................................2011.0010001000000
............................AATGGATATGACTACGGTT......................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..........................ATAATGGATATGACTACGGTTATGGT.................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...........................................................................................................................................................................................CACAGT----------------------C-----------------------------CAC------------------------------------------------------C--ACAGA-CAGGC--.......................................................................2111.0010010000000
..........................................................................................................................................CAGTAGCAGCAACAACTACCAGCAGTT................................................................................................................................................................................................................................2711.0010010000000
......................................................................................................CAACACGTC---GAGTAACTA..........................................................................................................................................................................................................................................................................1811.0010100000000
..................................................................................................ATAACAACACGTC---GAGTAACTACCACC.....................................................................................................................................................................................................................................................................2711.0010100000000
................................................................................................................................AAAACAAGAACAGTAGCAGCAA...............................................................................................................................................................................................................................................2211.0010000100000
.........................TATAATGGATATGACTACGGTTATGG..................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.............................................................................................TTACAATAACAACACGTC---GAGT...............................................................................................................................................................................................................................................................................2211.0010100000000
...................GGCTATTATAATGGATATG...............................................................................................................................................................................................................................................................................................................................................................1911.0010010000000
..............................................................................................................................................AGCAGCAACAACTACCAGC....................................................................................................................................................................................................................................1911.0010000100000
.........................................................................................................................................ACAGTAGCAGCAACAACTACCAGC....................................................................................................................................................................................................................................2411.0010010000000
...................................................................................................................................................................................................................................................................................................................AGA-CAGGC--AACACCAATCACAGCA.......................................................2411.0010100000000
CGGCGACTACTATGCCGGTGGCTATT...........................................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
.............................ATGGATATGACTACGGTTATGGTAA...............................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.........................................................................................................CACGTC---GAGTAACTACCACC.....................................................................................................................................................................................................................................................................2011.0010010000000
..............................................................................................................................................................................................................................................................................................................................AACACCAATCACAGCAACAAC-------...........................................2111.0010100000000
........................................................................................................ACACGTC---GAGTAACTACCACCAAA..................................................................................................................................................................................................................................................................2411.0010100000000
.......................ATTATAATGGATATGACTACGG........................................................................................................................................................................................................................................................................................................................................................2211.0010000000010
...........................................................................................................................................................ACCAGCAGTTTTAAGTAG--------C-----CACA......................................................................................................................................................................................................2311.0010000100000
.............................ATGGATATGACTACGGTTATG...................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....GACTACTATGCCGGTGGCT..............................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.........................................ACGGTTATGGTAAATACAAC........................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..............................................................................................................................................................................................................................................................................................................................AACACCAATCACAGCAACAAC-------CA--------CCA---...........................2611.0010010000000
.......................................................................................................................................................................................................................................................................................................................................CACAGCAACAAC-------CA--------CCA---GA-TT......................2111.0010100000000
........................................................................................................................................................................AGTAG--------C-----CACAGT----------------------C-----------------------------CAC------------------------------------------------------C--ACAGA-C.............................................................................2311.0010010000000
droPer2
TGGTGGGGGCTACAACGGCGGCTCACATGGCGGACATGG---CGGTCATGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
CGGTGATTACTATACCGGTGGCTACTATAACGGATATGACTACGGTTATGGTAAATACAACAAACAACAT---AATAATGCTCATACCAATTATTACAATAACAACACGTCGTCAAGTAATTATCATCAGACCAAGAACAATAG---CAACAACTATCAGCAGTTTTAATTA-------AGTAAACATAAGTGTCGGGCATA--------ACCAA-----------TAACAACAACAACAACAGCAACAG-----------CAGCAACAACAA----------CA-TC--A------T----CAAATCACACAAT-----------------------CAACAGAAAA----------------------AAAA-------------AGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................TA-------AGTAAACATAAGTGTCGGGC..............................................................................................................................................................................................22111.001101280
...........................................................................................................................................................................A-------AGTAAACATAAGTGTCGGGC..............................................................................................................................................................................................2115.00500230
....GATTACTATACCGGTGGCTA.............................................................................................................................................................................................................................................................................................................................................................................2015.00500140
....................................................................................................................................................................................GTAAACATAAGTGTCGGGC..............................................................................................................................................................................................1914.00400040
.................................ATATGACTACGGTTATGGT.................................................................................................................................................................................................................................................................................................................................................1913.00300120
..............................................................................................................................TCAGACCAAGAACAATAG---CAACAAC...........................................................................................................................................................................................................................................2513.00330000
............................................................................................ATTACAATAACAACACGTC......................................................................................................................................................................................................................................................................................1913.00300030
........................................................................................................................................................................ATTA-------AGTAAACATAAGTGTCGGGC..............................................................................................................................................................................................2413.00300030
......................................................................................................................................AGAACAATAG---CAACAACT..........................................................................................................................................................................................................................................1822.50550000
......................................................................................................................................................................TAATTA-------AGTAAACATAAGTGTCGGGC..............................................................................................................................................................................................2612.00210010
...........................................................................................................................................................ATCAGCAGTTTTAATTA-------AGT...............................................................................................................................................................................................................2012.00200020
..........................................................................................................................................................................TA-------AGTAAACATAAGTGTCGGGCATA--------ACC................................................................................................................................................................................2812.00211000
..........................................................................................................................................................................................ATAAGTGTCGGGCATA--------ACCA...............................................................................................................................................................................2012.00200020
......................................................................................................................................................................................AAACATAAGTGTCGGGCATA--------ACC................................................................................................................................................................................2312.00200200
........................................................................................................................................................................ATTA-------AGTAAACATAAGTGT...................................................................................................................................................................................................1912.00200020
....GATTACTATACCGGTGGC...............................................................................................................................................................................................................................................................................................................................................................................1812.00200020
...................................................................................................................................................................................AGTAAACATAAGTGTCGGGC..............................................................................................................................................................................................2012.00200020
...................GGCTACTATAACGGATATGAC.............................................................................................................................................................................................................................................................................................................................................................2112.00210010
.....................................................................................................................................................................TTAATTA-------AGTAAACATAAGTGTCGGGC..............................................................................................................................................................................................2712.00200020
..................................................................................................................................................................................................................................................AGCAACAG-----------CAGCAACAACAA----------CA-TC--A------T----C......................................................................................2711.00100010
...............................................................................................................................CAGACCAAGAACAATAG---CAAC..............................................................................................................................................................................................................................................2111.00100010
...................................................................................................................................................................................AGTAAACATAAGTGTCGG................................................................................................................................................................................................1811.00100010
...........................................................................................................................................AATAG---CAACAACTATCAGCAGT.................................................................................................................................................................................................................................2211.00101000
..........................................................................................................................................................................................ATAAGTGTCGGGCATA--------ACC................................................................................................................................................................................1911.00110000
........ACTATACCGGTGGCTACTATAACGGA...................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.......................ACTATAACGGATATGACT............................................................................................................................................................................................................................................................................................................................................................1811.00110000
..............................CGGATATGACTACGGTTA.....................................................................................................................................................................................................................................................................................................................................................1811.00110000
..................................................................................................................................................................................................................................................................................................A------T----CAAATCACACAAT-----------------------CAACA..............................................2011.00100010
.........................................................................................................................TATCATCAGACCAAGAACAAT.......................................................................................................................................................................................................................................................2111.00100001
....GATTACTATACCGGTGGCTACTATAA.......................................................................................................................................................................................................................................................................................................................................................................2611.00101000
...........................................................................................................................................................................A-------AGTAAACATAAGTGTCGGGCATA--------ACCA...............................................................................................................................................................................2811.00100100
.................................................................................................AATAACAACACGTCGTCAAGTAATTAT.........................................................................................................................................................................................................................................................................2711.00110000
..............................................................................................................CGTCAAGTAATTATCATCA....................................................................................................................................................................................................................................................................1911.00101000
...........................................................................................................................................................................A-------AGTAAACATAAGTGTCGGGCATA--------AC.................................................................................................................................................................................2611.00100010
......................................................................................................CAACACGTCGTCAAGTAA.............................................................................................................................................................................................................................................................................1811.00100010
.....................................................................................................................................................................................TAAACATAAGTGTCGGGA..............................................................................................................................................................................................1811.00100010
.......................................................................................................................................................................AATTA-------AGTAAACATAAGTGTCGGGC..............................................................................................................................................................................................2511.00100010
...................................................................................................................................................................................AGTAAACATAAGTGTCGGG...............................................................................................................................................................................................1911.00100010
....................................................................................................AACAACACGTCGTCAAGTAATT...........................................................................................................................................................................................................................................................................2211.00101000
............................AACGGATATGACTACGGTTATGGT.................................................................................................................................................................................................................................................................................................................................................2411.00100010
...............................................................................................................................................................................................................................................................................................C--A------T----CAAATCACACAAT-----------------------CAACAGA............................................2311.00100010
....GATTACTATACCGGTGGCT..............................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...............................................................................................................................................................................................................................................................................AA----------CA-TC--A------T----CAAATCACACAAT-----------------------C..................................................2211.00100010
.......................................................................................................................................................................................AACATAAGTGTCGGGCATA--------ACCA...............................................................................................................................................................................2311.00100010
.GGTGATTACTATACCGGTGGCTA.............................................................................................................................................................................................................................................................................................................................................................................2311.00100010
...................................................................................................................................................CAACAACTATCAGCAGTTTTAATT..........................................................................................................................................................................................................................2411.00101000
...TGATTACTATACCGGTGG................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
...............................................................................................................................................G---CAACAACTATCAGCAGTT................................................................................................................................................................................................................................1911.00100010
........................................................................................................................TTATCATCAGACCAAGAAC..........................................................................................................................................................................................................................................................1911.00100010
.............................ACGGATATGACTACGGTTATGGT.................................................................................................................................................................................................................................................................................................................................................2311.00101000
......................................................................................................................................................................................AAACATAAGTGTCGGGCATA--------ACCAA-----------...................................................................................................................................................................2511.00100010
....................................................................................................................GTAATTATCATCAGACCAAGAACAAT.......................................................................................................................................................................................................................................................2611.00100010
...........................................................................................................................................................................A-------AGTAAACATAAGTGTCGGGCAT............................................................................................................................................................................................2311.00101000
................................GATATGACTACGGTTATGGT.................................................................................................................................................................................................................................................................................................................................................2011.00100010
..............................................................................................................................................AG---CAACAACTATCAGCAGT.................................................................................................................................................................................................................................1911.00100010
.....................CTACTATAACGGATATGACTACG.........................................................................................................................................................................................................................................................................................................................................................2311.00100010
...................GGCTACTATAACGGATATGACT............................................................................................................................................................................................................................................................................................................................................................2211.00100010
............................AACGGATATGACTACGGTTATGGTAAAT.............................................................................................................................................................................................................................................................................................................................................2811.00101000
...........................TAACGGATATGACTACGGTTAT....................................................................................................................................................................................................................................................................................................................................................2211.00100010
....................................................................................................AACAACACGTCGTCAAGTA..............................................................................................................................................................................................................................................................................1911.00100010
..........................................................................................................................ATCATCAGACCAAGAACAATAG---CAACAAC...........................................................................................................................................................................................................................................2911.00110000
......................................................................................................................................................................................AAACATAAGTGTCGGGCA.............................................................................................................................................................................................1811.00100100
...........................................................................................................................................................................A-------AGTAAACATAAGTGTCGGGCATA--------ACC................................................................................................................................................................................2711.00100010
..........................................................................................................................................................................TA-------AGTAAACATAAGTGTCGG................................................................................................................................................................................................2011.00100100
............................AACGGATATGACTACGGTTATG...................................................................................................................................................................................................................................................................................................................................................2211.00100010
.....ATTACTATACCGGTGGCTA.............................................................................................................................................................................................................................................................................................................................................................................1911.00100010
........................................................................................................................................................................................ACATAAGTGTCGGGCATA--------AC.................................................................................................................................................................................2011.00100010
..............................................................................................................................................................................................................................................................................................................CAAATCACACAAT-----------------------CAACAGAA...........................................2111.00100010
............................................................................................................................CATCAGACCAAGAACAATAG---CAACAACT..........................................................................................................................................................................................................................................2811.00110000
.......................................................................................................AACACGTCGTCAAGTAATTATCATC.....................................................................................................................................................................................................................................................................2511.00110000
...........................................................................................TATTACAATAACAACACGTCGTC...................................................................................................................................................................................................................................................................................2311.00100100
............................................................................................ATTACAATAACAACACGTCGTC...................................................................................................................................................................................................................................................................................2211.00100010
..........................................................................................................................................................................................ATAAGTGTCGGGCATA--------ACCAA-----------...................................................................................................................................................................2111.00100100
...TGATTACTATACCGGTGGC...............................................................................................................................................................................................................................................................................................................................................................................1911.00101000
.......................................................................................................................................................................................................................................................CAG-----------CAGCAACAACAA----------CA-TC--A------T----C......................................................................................2280.13100010
............................................................................................................................................................................................................................................AACAACAGCAACAG-----------CAGCAACAA.......................................................................................................................23200.10202000
......................................................................................................................................................................................................................................AACAACAACAACAGCAACAG-----------CAGCAAC.........................................................................................................................27130.08100010
.....................................................................................................................................................................................................................................CAACAACAACAACAGCAACAG-----------CAGCAA..........................................................................................................................27160.06100010
.........................................................................................................................................................................................................................................AACAACAACAGCAACAG-----------CAGCAACAA.......................................................................................................................26190.05100010
........................................................................................................................................................................................................................................CAACAACAACAGCAACAG-----------CAGCAACA........................................................................................................................26200.05100010
.....................................................................................................................................................................................................................................CAACAACAACAACAGCAACAG-----------CAGCA...........................................................................................................................26200.05100010
........................................................................................................................................................................................................................................CAACAACAACAGCAACAG-----------CAGCAAC.........................................................................................................................25200.05100010
.........................................................................................................................................................................................................................................AACAACAACAGCAACAG-----------CAGCAACA........................................................................................................................25200.05100010
...........................................................................................................................................................................................................................................CAACAACAGCAACAG-----------CAGCAAC.........................................................................................................................22200.05100010
..................................................................................................................................................................................................................................TAACAACAACAACAACAGCAA..............................................................................................................................................21200.05100010
..........................................................................................................................................................................................................................................ACAACAACAGCAACAG-----------CAGCAAC.........................................................................................................................23200.05100010
droVir3
TGCCGATTACTATGCCGGTGGCTACTATAATGGATATGACTATGGTTATGGTAAATACAACAAACAACAA---AATAATGCTCATAACAATTATTATAATAACACAACGTC---AAGTAATTATCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAA------TCT-AGC-----TAAATA----------------------CA--------G-----------------GCAACAA-----------AAG--------------------------------------CAAAC-----AAAC--AACCACAA------------CAACAATAAACAAAAATGCCATTA--------TA-CAACATTTTGAAACAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................AATGGATATGACTATGGTTATGGT.................................................................................................................................................................................................................................................................................................................................................2413.003001100000000000000000000000000000000000000000000000000000001000
..........................ATAATGGATATGACTATGGTTAT....................................................................................................................................................................................................................................................................................................................................................2313.003001000000001000100000000000000000000000000000000000000000000000
...............................................................................................ATAATAACACAACGTC---AAGTAATT...........................................................................................................................................................................................................................................................................2412.002002000000000000000000000000000000000000000000000000000000000000
............................AATGGATATGACTATGGT.......................................................................................................................................................................................................................................................................................................................................................1812.002000000000020000000000000000000000000000000000000000000000000000
.............................ATGGATATGACTATGGTTATGGT.................................................................................................................................................................................................................................................................................................................................................2312.002000000020000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AAC--AACCACAA------------CAACAATAAACA.......................................2311.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................ATGCTCATAACAATTATTATAATA................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AAACAAAAATGCCATTA--------TA-C...............2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................AGTTCTAA------TCT-AGC-----TAAATA----------------------CA--------G-----------------GC................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
...CGATTACTATGCCGGTGGCTAC............................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000100000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................A-----------AAG--------------------------------------CAAAC-----AAAC--AACCACAA------------CAAC...............................................2511.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................A-----------AAG--------------------------------------CAAAC-----AAAC--AACCACAA------------CAACA..............................................2611.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................ATTATAATAACACAACGTC---AAGT...............................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................AACCACAA------------CAACAATAAACAAAAA...................................2411.001000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................AAG--------------------------------------CAAAC-----AAAC--AACCACAA------------C..................................................2111.001000000000000000000000000000001000000000000000000000000000000000
....GATTACTATGCCGGTGGCTA.............................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
........ACTATGCCGGTGGCTACTAT.........................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
......TTACTATGCCGGTGGCTACTA..........................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................CTATGGTTATGGTAAATAC...........................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................ATCAGCAGTTCTAA------TCT-AGC-----TAAAT.....................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000001
...........................................................ACAAACAACAA---AATAATGCTC..................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................GCAGTTCTAA------TCT-AGC-----TA........................................................................................................................................................................................................1811.001000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................AG--------------------------------------CAAAC-----AAAC--AACCACAA------------CA.................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................AACAATAG---CAACAACTATCAGC....................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
................GGTGGCTACTATAATGGATATGACT............................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................AA------TCT-AGC-----TAAATA----------------------CA--------G-----------------GCAAC.............................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
............................AATGGATATGACTATGGTTATGGC.................................................................................................................................................................................................................................................................................................................................................2411.001000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................AAACAAGAACAATAG---CAACA.............................................................................................................................................................................................................................................2011.001000000000000000000000000000000000001000000000000000000000000000
.......................................................................................................................................................................AA------TCT-AGC-----TAAATA----------------------CA--------G-----------------GC................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................AATA----------------------CA--------G-----------------GCAACAA-----------AAG--------------------------------------CAAA...................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
..................................................................ACAA---AATAATGCTCATAACA............................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................TATAATAACACAACGTC---AAGTAATTA..........................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000100000000000000000000000000000000
..........................ATAATGGATATGACTATGG........................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................TAG---CAACAACTATCAGCAGTTCTAA------TC....................................................................................................................................................................................................................2711.001000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................AAGAACAATAG---CAACAACT..........................................................................................................................................................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
...................................................TAAATACAACAAACAACAA---AATAATGC....................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TAAACAAAAATGCCATTA--------TA-................2011.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................CAA-----------AAG--------------------------------------CAAAC-----AAAC--AACCAC.................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................ACAACTATCAGCAGTTCTAA------T.....................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................AAACAAGAACAATAG---CAACAACT..........................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...............................GGATATGACTATGGTTATGGT.................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................G--------------------------------------CAAAC-----AAAC--AACCACAA------------C..................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................ATAACACAACGTC---AAGTAATTATC........................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................ACAAGAACAATAG---CAACAACTATCAGC....................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
......TTACTATGCCGGTGGCTACT...........................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................CAATAAACAAAAATGCCATTA--------TA-CAAC............2711.001000000000000000000000000000010000000000000000000000000000000000
.....................................................................A---AATAATGCTCATAACAAT..........................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AAAC-----AAAC--AACCACAA------------CAACA..............................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........CTATGCCGGTGGCTACTATAATGGATATGACTATGGTTATG...................................................................................................................................................................................................................................................................................................................................................4111.001000000000000000000000000000000000000000000000000000001000000000
..................................................................................................................................................................................................................................................................................................................................................................TGCCATTA--------TA-CAACATTTTGAAAC..2411.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TTCTAA------TCT-AGC-----TAAATA----------------------C.............................................................................................................................................................................1911.001000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................AATA----------------------CA--------G-----------------GCAACAA-----------AAG--------------------------------------C......................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TGCCATTA--------TA-CAACATTTTGAAACA.2511.001000000000000000000000000000000001000000000000000000000000000000
..........................................................................ATAATGCTCATAACAATTAT.......................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................TAA------TCT-AGC-----TAAATA----------------------CA--------G-----------------GCAACAA-----------AA..............................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
............................AATGGATATGACTATGGTTATGGTA................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000001000
droMoj3
TGCCGATTACTATGCCGGTGGCTACTATAATGGATATGACTATGGTTATGGTAAATACAACAAACAACAT---AATAATACTCATAACAATTATTACAATAACCCAACGTC---AAGTAACTATCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTTTAA-TA-----T-AGC-----CAAATGCAGGCAACA--------AACAA-----------T----------------GCAA-ATGA---------AAGCAAAAACAA-----------A-AA--CA--AAATCCAAC---------AAAC--AACAACTA------------CAACAATAAA----------------------CAAA-------------AASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................ATTACAATAACCCAACGTC---AAGT...............................................................................................................................................................................................................................................................................2312.002200000
....................................................................................................................................CAAGAACAATAG---CAACAACT..........................................................................................................................................................................................................................................2012.002200000
......................................................................................................................................................................TAA-TA-----T-AGC-----CAAATGCAGG................................................................................................................................................................................................1912.002200000
........................CTATAATGGATATGACTATGGTT......................................................................................................................................................................................................................................................................................................................................................2312.002100001
.................................................................................................AATAACCCAACGTC---AAGTAACTATCATCA....................................................................................................................................................................................................................................................................2911.001100000
....................................................................................................................................................................................................GCAACA--------AACAA-----------T----------------GCAA-ATGA---------AAGCAA..........................................................................................................................2611.001100000
................................................................................................................................................................................................................................................................................A-----------A-AA--CA--AAATCCAAC---------AAAC--AACAACTA------------CA.................................................2911.001000010
......................................................................................................................................................................................................AACA--------AACAA-----------T----------------GCAA-ATGA---------AA..............................................................................................................................2011.001100000
...................GGCTACTATAATGGATATGACT............................................................................................................................................................................................................................................................................................................................................................2211.001100000
..............................................................................................................................................AG---CAACAACTATCAGCAGTTTTAA-TA-----....................................................................................................................................................................................................................2611.001100000
.................................................................................................................................AAACAAGAACAATAG---CAACAACTATCAGC....................................................................................................................................................................................................................................2911.001100000
..................................................................................................................................................................GTTTTAA-TA-----T-AGC-----CAAATGCAGGCAACA--------A..................................................................................................................................................................................2911.001100000
.......................................................TACAACAAACAACAT---AATAATACTCA.................................................................................................................................................................................................................................................................................................................2611.001100000
..............................................................................................................................................AG---CAACAACTATCAGCAGT.................................................................................................................................................................................................................................1911.001000001
....................................................AAATACAACAAACAACAT---AATA........................................................................................................................................................................................................................................................................................................................2211.001100000
.........CTATGCCGGTGGCTACTATA........................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..................................TATGACTATGGTTATGGTAAATACAAC........................................................................................................................................................................................................................................................................................................................................2711.001100000
.........................................................................AATAATACTCATAACAATT.........................................................................................................................................................................................................................................................................................................1911.001100000
....................................................................................................AACCCAACGTC---AAGTAACTATCA.......................................................................................................................................................................................................................................................................2311.001100000
.....................................................................................................ACCCAACGTC---AAGTAACTAT.........................................................................................................................................................................................................................................................................2011.001001000
.....ATTACTATGCCGGTGGCTACTA..........................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...............................................ATGGTAAATACAACAAACAACAT---AATA........................................................................................................................................................................................................................................................................................................................2711.001100000
...............................................................................................................................................................................................................................................................................AA-----------A-AA--CA--AAATCCAAC---------AAAC--AACAA..................................................................2511.001100000
..............................................................................................................C---AAGTAACTATCATCAAAA.................................................................................................................................................................................................................................................................1911.001100000
.GCCGATTACTATGCCGGTGG................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....................GCTACTATAATGGATATGACTATGGTT......................................................................................................................................................................................................................................................................................................................................................2711.001100000
.........CTATGCCGGTGGCTACTATAATGG....................................................................................................................................................................................................................................................................................................................................................................2411.001100000
............................AATGGATATGACTATGGTT......................................................................................................................................................................................................................................................................................................................................................1911.001000001
....................................................................................................................................................................TTTAA-TA-----T-AGC-----CAAATGCAGGCAACA--------...................................................................................................................................................................................2611.001100000
..........................................................................................................................................................TATCAGCAGTTTTAA-TA-----T-AGC-----C.........................................................................................................................................................................................................2211.001100000
.............................ATGGATATGACTATGGTTATGGTAAAT.............................................................................................................................................................................................................................................................................................................................................2711.001100000
............................................................................................................................................................................................................................................................................................................AAC---------AAAC--AACAACTA------------CAACA..............................................2030.331100000
droGri2
TGCCGATTACTATGCCGGTGGCTACTATAATGGATATGACTATGGTTATGGTAAATACAACAAACAACATAATAATAATGCTCATAACAGTT--TATAATAACACAACGAC---AAGTAATTACCATCAAAACAAGAACAATAG---CAACAACTATCAGCAGTTCTAATG------T-AGC-----TAAATA------------------------------CTG-------------GC----AACAA-----------AA---------------------------------------CAAACAAA-CATAC--AACAAGAACTA---------CAACAATAAACAAAAATGCCATTA--------TA-C-------------AASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....GATTACTATGCCGGTGGCTACT...........................................................................................................................................................................................................................................................................................................................................................................2211.00110
......................................................................................................................................................................................................................................................................A---------------------------------------CAAACAAA-CATAC--AACAAGAACTA---------C..................................................2611.00110
......................................................................................................................................AGAACAATAG---CAACAACTATCAGCAGTT................................................................................................................................................................................................................................2811.00110

Generated: 05/18/2015 at 12:28 PM