ID:

dsi_12665

 Coordinate:

4:889823-889972 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.0

Flybase annnotation

intergenic

No Repeatable elements found

mature
  1. 2r:705719-705740 +
  2. 2r:1395176-1395197 +
  3. dsi_12665  4:889938-889959 +
star

Sense Strand Reads

TCTATTCGGCTTGTAATATTTCTTTCTCTCTTACTTGAATACAAAAAAGGGTAAGCCATACTCTCTGAAGAATATGTAACAGACAGAACAAAGAGGATGTATACCTAACATTAGGCATTACAAATAAATATTTTAACGCTTGAAACAAGCAAGAGCCTCGTAGGAGTTACTAGAATCTGGACGGATACGGGTTGAAAAACTTCATCTATGCTGTTATCTAAAAACGTGTTGAACTTTATGAAAGCTAAAT
********************************************************************************...((((.....((((.((((..((((....))))...))))...............(((((...))))).....)))).(((......)))...))))........*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR902008
ovaries
 M023
head
 M053
female body
 GSM343915
embryo
 SRR902009
testis
............................................................................................................................................................................................................................AAAACGTGTTGAACTTTATGAAAGC..... 25 0 2 61.00 122 90 30 0 2 0 0 0 0 0 0 0
.....................................................................................................................................................................GTTACTAGAATCTGGACGGATA............................................................... 22 0 3 40.00 120 0 1 84 31 3 0 0 0 1 0 0
..........................................................................................................................................................................................................................TAAAAACGTGTTGAACTTTATGAAAGC..... 27 0 2 28.00 56 41 8 5 2 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TGTTATCTAAAAACGTGTTGAACT............... 24 0 4 21.00 84 37 46 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................GGAGTTACTAGAATCTGGACGGAT................................................................ 24 0 3 16.33 49 27 19 0 3 0 0 0 0 0 0 0
..................................................................................................................................................................GGAGTTACTAGAATCTGGACGGA................................................................. 23 0 3 12.67 38 24 14 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TAGGAGTTACTAGAATCTGGACGGA................................................................. 25 0 3 12.33 37 6 29 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AACGTGTTGAACTTTATGAAAGCTAAA. 27 0 2 12.00 24 13 11 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGAAACAAGCAAGAGCCTCGTAGGAGT................................................................................... 27 0 3 10.67 32 13 13 2 3 1 0 0 0 0 0 0
..................................................................................................................................................................GGAGTTACTAGAATCTGGACGGATA............................................................... 25 0 3 10.33 31 19 12 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................GAGTTACTAGAATCTGGACGGATA............................................................... 24 0 3 8.67 26 24 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TCTGGGCTGATCCGGGTTGAA...................................................... 21 3 2 5.50 11 0 0 0 0 0 5 0 4 2 0 0
...................................................................................................................................................................GAGTTACTAGAATCTGGACGGAT................................................................ 23 0 3 5.00 15 15 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................AAACGTGTTGAACTTTATGAAAGC..... 24 0 2 5.00 10 9 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................GTTACTAGAATCTGGACGGAT................................................................ 21 0 3 5.00 15 0 0 8 4 3 0 0 0 0 0 0
.....................................................................................................................................................................GTTACTAGAATCTGGACGGATAC.............................................................. 23 0 3 4.67 14 0 0 5 5 4 0 0 0 0 0 0
............................................................................................................................................................................................................................AAAACGTGTTGAACTTTATGAAAGCTAAA. 29 0 2 4.50 9 7 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TGTTATCTAAAAACGTGTTGAACTT.............. 25 0 4 4.25 17 3 13 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AAAACGTGTTGAACTTTATGAAAGCTA... 27 0 2 4.00 8 4 4 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AAAACGTGTTGAACTTTATGAAAGCTAA.. 28 0 2 3.50 7 4 2 0 1 0 0 0 0 0 0 0
...........................................................................................................................................TTGAAACAAGCAAGAGCCTCGTAGGAGT................................................................................... 28 0 3 3.00 9 4 5 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................GGAGTTACTAGAATCTGGACGGATAC.............................................................. 26 0 3 3.00 9 4 5 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TCGTAGGAGTTACTAGAATCTGGACGGA................................................................. 28 0 3 3.00 9 2 7 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TAAAAACGTGTTGAACTTTATGAAAG...... 26 0 2 2.50 5 5 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................GTAGGAGTTACTAGAATCTGGACGGA................................................................. 26 0 3 2.33 7 1 6 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGAAACAAGCAAGAGCCTCGTAGGAGTT.................................................................................. 28 0 3 2.33 7 5 2 0 0 0 0 0 0 0 0 0
................................................................................AGACAGAACAAAGAGGATGTA..................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0
.......................................................................................................................................................................TACTAGAATCTGGACGGATACGGGT.......................................................... 25 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AAAACGTGTTGAACTTTATGAAAG...... 24 0 2 2.00 4 3 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TTGAAACAAGCAAGAGCCTCGTAGGAGTT.................................................................................. 29 0 3 2.00 6 4 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GTTACTAGAATCTGGACGGATACGGG........................................................... 26 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0
.......................................................................................................................................................AGAGCCTCGTAGGAGTTACTAGAATC......................................................................... 26 0 4 1.75 7 0 1 0 0 6 0 0 0 0 0 0
...................................................................................................................................................................................................................TGTTATCTAAAAACGTGTTGAACTTT............. 26 0 4 1.75 7 6 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GTTACTAGAATCTGGACGGA................................................................. 20 0 3 1.67 5 0 0 4 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................AAAACGTGTTGAACTTTATGAAAGCT.... 26 0 2 1.50 3 3 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................AATATTTTAACGCTTGAAACAAGCAAGA................................................................................................ 28 0 3 1.33 4 4 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGAAACAAGCAAGAGCCTCGTAGGA..................................................................................... 25 0 3 1.33 4 0 0 2 2 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TAAAAACGTGTTGAACTTTATGAA........ 24 0 4 1.25 5 4 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGAAACAAGCAAGAGCCTCGTAGG...................................................................................... 24 0 3 1.00 3 2 0 1 0 0 0 0 0 0 0 0
.................................................................TGAAGAATATGTAACAGACAGAACAAAGA............................................................................................................................................................ 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................TAGGAGTTACTAGAATCTGGA..................................................................... 21 0 3 1.00 3 0 2 0 1 0 0 0 0 0 0 0
................................................................................................................................................................TAGGAGTTACTAGAATCTGGACGG.................................................................. 24 0 3 1.00 3 0 2 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................GTTACTAGAATCTGGACGGATAT.............................................................. 23 1 3 1.00 3 0 0 2 1 0 0 0 0 0 0 0
TCTATTCGGCTTGTAATATTTCTT.................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................AGGATGTATACCTAACATTAGGCATT................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................TGTAACAGACAGAACAAAGAGGATGTA..................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
....................................................................AGAATGTGTAACAGACAGAACAAAGA............................................................................................................................................................ 26 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................GTTACTAGAATCTGGACGGATACG............................................................. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................AACGTGTTGAACTTTATGAAAGC..... 23 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0
...................................................TAAGCCATACTCTCTGAAGAATATGTA............................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................TATTTTAACGCTTGAAACAAGCAAGA................................................................................................ 26 0 3 1.00 3 0 2 1 0 0 0 0 0 0 0 0
............................................................................................GAGGATGTATACCTAACATTAGGCA..................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................CAAGAGCCTCGTAGGAGTTACTAGA............................................................................ 25 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AAAACGTGTTGAACTTTATGAAA....... 23 0 4 0.75 3 1 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TAAAAACGTGTTGAACTTTATGAAA....... 25 0 4 0.75 3 2 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TGTTATCTAAAAACGTGTTGAACTTTA............ 27 0 4 0.75 3 3 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TATCTAAAAACGTGTTGAACTTTATG.......... 26 0 4 0.75 3 2 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................CTGGGCTGATCCGGGTTGAA...................................................... 20 3 4 0.75 3 0 0 0 0 0 2 0 1 0 0 0
......................................................................................................................................................AAGAGCCTCGTAGGAGTTACTAGAATC......................................................................... 27 0 4 0.75 3 0 0 0 0 3 0 0 0 0 0 0
....................................................................................................................................................................AGTTACTAGAATCTGGACGGAT................................................................ 22 0 3 0.67 2 0 0 0 2 0 0 0 0 0 0 0
................................................................................................................................................................TAGGAGTTACTAGAATCTGGACG................................................................... 23 0 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................AGCCTCGTAGGAGTTACTAGAATCTGGA..................................................................... 28 0 3 0.67 2 1 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................TAGGAGTTACTAGAATCTGGACGGAA................................................................ 26 1 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0
....................................................................................................................................................GCAAGAGCCTCGTAGGAGT................................................................................... 19 0 3 0.67 2 0 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................GTTACTAGAATCTGGACGGATATT............................................................. 24 2 3 0.67 2 0 0 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................AGTTACTAGAATCTGGACGGATA............................................................... 23 0 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................GTAGGAGTTACTAGAATCTGGACGG.................................................................. 25 0 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TAGGAGTTACTAGAATCTGGACGGAT................................................................ 26 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GTTACTAGAATCTGGACGGATACTT............................................................ 25 2 3 0.67 2 0 0 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................GGAGTTACTAGAATCTGGACGG.................................................................. 22 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................AGTTACTAGAATCTGGACGGATAC.............................................................. 24 0 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGAAACAAGCAAGAGCCTCGTAGGAG.................................................................................... 26 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................ACGCTTGAAACAAGCAAGAGCCTCGT......................................................................................... 26 0 3 0.67 2 0 1 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................AGGAGTTACTAGAATCTGGACGGATA............................................................... 26 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TTGAAACAAGCAAGAGCCTCGTAGGA..................................................................................... 26 0 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AACAAGCAAGAGCCTCGTAGGAGT................................................................................... 24 0 3 0.67 2 0 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................GTTACTAGAATCTGGA..................................................................... 16 0 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0
..........................................................................................................................................................................................................................TAAAAACGGGTTGAACTTTATGAAAGC..... 27 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
...................................................TAAGCCGTATTCTGTGAAGAAT................................................................................................................................................................................. 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................................................AAACGGGTTGAACTTTATGAAAGC..... 24 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................AAACGTGTTGAACTTTATGAAAGCTAAA. 28 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................AAACGTGTTGAACTTTATGAAAGCTAA.. 27 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AAATCGTGTTGAACTTTATGAAAGC..... 25 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AAAACGTGTTGAACTTTATGAAAGCTAAT. 29 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................TTGAACTTTATGAAAGCT.... 18 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................AACGTGTTGAACTTTATGAAAGCTAAAA 28 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TCTGGGCTGATTCGGGTTGAA...................................................... 21 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................AAAACGTGTTGAACTTTATGAAGG...... 24 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AAAATGTGTTGAACTTTATGAAAGC..... 25 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AACGTGTTGAACTTTATGAAAGCTAA.. 26 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TAAAAACGTGTTGAACTTTATGAAAGCA.... 28 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AACGTGTTGAACTTTCTGAAAGC..... 23 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................AAAACGTGTTGAATTTTATGAAAGC..... 25 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CGTTATCTAAAAACGTGTTGAACT............... 24 1 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TATCTAAAAACGTGTTGAACTTTATGAA........ 28 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AACGTGTTGAACTTTATGAAAGCTA... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................GTGTTGAACTTTATGAAAGCTAAA. 24 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................TTGAACTTTATGAAAGCTAAA. 21 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................AAAACGTTTTGAACTTTATGAAAGC..... 25 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................AAACGTGTTGAACTTTATGAAAGCTAAAA 29 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................AAACGTGTTGAACTTTATGAAAGCTA... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AAAACCTGTTGAACTTTATGAAAGC..... 25 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GTTACTAGAATCTGGAAGGATA............................................................... 22 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................TTAACGCTTGAAACAAGCAAGAGCCTCGTA........................................................................................ 30 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................GGAGTTACTAGAATCTGGATGGAT................................................................ 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GAAACAAGCAAGAGCCTCGTAGGAGTT.................................................................................. 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TAACGCTTGAAACAAGCGAGAGCCTC........................................................................................... 26 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................GGACTGATCCGGGTTGAAGA.................................................... 20 3 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................AATATTTTAACGCTTGAAACAAG..................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGAAACAAGCAAGAGCCTCGTAGGAGA................................................................................... 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................GGAGTTAATAGAATCTGGACGGAT................................................................ 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TCGTAGGAGTTACTAGAATCTGGA..................................................................... 24 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................CGCTTGAAACAAGCAAGAGCCTCGTAGG...................................................................................... 28 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................AGTTACTAGAATCTGGACGGA................................................................. 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................AACGCTTGAAACAAGCAAGAGC.............................................................................................. 22 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................GTTACTAGAATCTGGACGGATACT............................................................. 24 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................TGAAACAAGCAAGAGCCTCGTAGGATTA.................................................................................. 28 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GTTACTAGAGTCTGGACGGATA............................................................... 22 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................GAGTTACTAGAATCTGGACGGA................................................................. 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TAGGAGTTACTAGAATCTGGACGGATA............................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................CAAGCAAGAGCCTCGTAGGAGT................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GTTACTAGAATCTGGACCGATA............................................................... 22 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................GAGTTATTAGAATCTGGACGGATA............................................................... 24 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................GTAGGAGTTACTAGAATCTGGACGGATAC.............................................................. 29 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................TGAAACAAGCAAGAGCC............................................................................................. 17 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CTCGTAGGAGTTACTAGAATCTGGAC.................................................................... 26 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................AAACAAGCAAGAGCCTCGTAGGAGTTAC................................................................................ 28 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................TTTAACGCTTGAAACAAGCAAGAGC.............................................................................................. 25 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................AACGCTTGAAACAAGCAAGAGCCTC........................................................................................... 25 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................AAACAAGCAAGAGCCTCGTAGGAGT................................................................................... 25 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................GTAGGAGTTACTAGAATCTGGACGGAA................................................................ 27 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TTGAAACAAGCAAGAGCCTCGTAGGAG.................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TAACGCTTGAAACAAGCAAGAGCCTC........................................................................................... 26 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................GTTACTAGAATCTGGACGGATAA.............................................................. 23 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................GTTACCAGAATCTGGACGGAT................................................................ 21 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GTTACTAGAATCTGGACGG.................................................................. 19 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................TTGAAACAAGCAAGAGCCTCGTAAA...................................................................................... 25 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................AACAAGCAAGAGCCTCGTAGGAT.................................................................................... 23 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................TTGAAACAAGCAAGAGCCTCGTAGGAGTTA................................................................................. 30 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGAATCTGGACGGATAC.............................................................. 17 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................ACAAGCAAGAGCCTCGTAGGAGTTAC................................................................................ 26 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TAACGCTTGAAACAAGCAAGAGC.............................................................................................. 23 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................ACAAGCAAGAGCCTCGTAGGAGTTA................................................................................. 25 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TTGAAACAAGCAAGAGCCTCGTAGGAT.................................................................................... 27 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................AACAAGCAAGAGCCTCGTAGGAGTT.................................................................................. 25 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................TCTGGGCTGATCCGGGTTG........................................................ 19 3 12 0.33 4 0 0 0 0 0 0 0 0 4 0 0
.....................................................................................................................................TAACGCTTGAAACAAGCAAGAGCCTCA.......................................................................................... 27 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................CTTGAAACAAGCAAGAGCCTCT.......................................................................................... 22 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................GTGACTAGAATCTGGACGGATA............................................................... 22 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................CTTGAAACAAGCAAGAGCCTCGTAGGAGT................................................................................... 29 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TAGGAGTTACTAGAATCTGGACGGATAC.............................................................. 28 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................GTAGGAGTTACTAGAATCTGGACGGATA............................................................... 28 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................AACGCTTGAAACAAGCAAGAGCCTCGTA........................................................................................ 28 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TTGAAACAAGCAAGAGCCTC........................................................................................... 20 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AAACAAGCAAGAGCCTCGTAGGAGTT.................................................................................. 26 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................GAGTTACTAGAATCTGGACGGATAC.............................................................. 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GGTACTAGAATCTGGACGGATAC.............................................................. 23 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................ACAAGCAAGAGCCTCGTAGGAGT................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TACTAGAATCTGGACGGATA............................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGAAACAAGCAAGAGCCTCGA......................................................................................... 21 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TAGGAGTTACTAGAATCTGGACGGT................................................................. 25 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................GCCTCGTAGGAGTTACTAGAATCTGGA..................................................................... 27 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................AGAGCCTCGTAGGAGTTACTAGAATCTGGA..................................................................... 30 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TTGAAACAAGCAAGAGCCTCGTAGAAA.................................................................................... 27 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................GAAACAAGCAAGAGCCTCGTGGGAGT................................................................................... 26 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................TAACGCTTGAAACAAGCAAGAGCCTCG.......................................................................................... 27 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................TGGTAGGAGTTACTAGAATCTGG...................................................................... 23 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TGTTATCTAAAAACGTGTTGAAC................ 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GCTGTTATCTAAAAACTTGTTGAACTT.............. 27 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GCTGTTATCTAAAAAAGTGTTGAACTT.............. 27 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................AGAGCCTCGTAGGAGT................................................................................... 16 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................TGTTATCTAAAAACGTGTTAAACTT.............. 25 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CAAGAGCCTCGTAGGAGTTACTAGAA........................................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TATCTAAAAACGTGTTGAAC................ 20 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TGTTATCTAAAAACGTGTTGAACTTTAA........... 28 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................TCTGGGCTGATCCGGGTTGA....................................................... 20 3 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................AGAGCCTCGTAGGAGTTACTAGAAT.......................................................................... 25 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AAAACGTGTTGAACTT.............. 16 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................AAGAGCCTCGTAGGAGTTACTAGAAT.......................................................................... 26 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................GAGCCTCGTAGGAGTTACTAGAATC......................................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................AGAGCCTCGTAGGAGTTACTAGAAAC......................................................................... 26 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................AGAGCCTCGTAGGAGTTACTAGA............................................................................ 23 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................TCTGGTCTGATCCGGGTTGAA...................................................... 21 3 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................TCCATGCTGTTATGTAAAA........................... 19 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0
....................................................................................AGAACGAGGAGGATGTATAA.................................................................................................................................................. 20 3 13 0.15 2 0 0 0 0 0 0 0 0 0 0 2
.....................................................................................GAACGAGGAGGATGTATAA.................................................................................................................................................. 19 3 20 0.15 3 0 0 0 0 0 0 0 0 0 0 3
................................................................................................................................................ACACGCAAGAGCCTC........................................................................................... 15 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................TCGGGGCGGATCCGGGTTG........................................................ 19 3 9 0.11 1 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................TCGGGACTGATCCGGGTTG........................................................ 19 3 9 0.11 1 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................TAGGAGTTACTAGAATAA........................................................................ 18 2 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TGGGCTGATCCGGGTTGAA...................................................... 19 3 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................TCTGAAGGATATGTA............................................................................................................................................................................ 15 1 13 0.08 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................CCATGCTGTTATGTAAA............................ 17 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................CCCGTAGGAGTTACCATA............................................................................ 18 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
...............................................AGGGTAAGCCGTCCT............................................................................................................................................................................................ 15 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AGATAAGCCGAACATTATAAAGAAAGAGAGAATGAACTTATGTTTTTTCCCATTCGGTATGAGAGACTTCTTATACATTGTCTGTCTTGTTTCTCCTACATATGGATTGTAATCCGTAATGTTTATTTATAAAATTGCGAACTTTGTTCGTTCTCGGAGCATCCTCAATGATCTTAGACCTGCCTATGCCCAACTTTTTGAAGTAGATACGACAATAGATTTTTGCACAACTTGAAATACTTTCGATTTA
***************************************************************...((((.....((((.((((..((((....))))...))))...............(((((...))))).....)))).(((......)))...))))........******************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 M023
head
 SRR902009
testis
 M024
male body
.......................................................................................................................................................TCTCGGAGCATCCTCAATGATCTT........................................................................... 24 0 4 31.25 125 24 34 19 10 35 0 3 0 0 0 0
....................................................................................................................................................................................................................CAATAGATTTTTGCACAACTTGAAAT............ 26 0 4 22.00 88 53 6 10 1 10 0 6 2 0 0 0
..........................................................................................................................................................CGGAGCATCCTCAATGATCTTAGAC....................................................................... 25 0 4 12.25 49 19 5 14 8 0 3 0 0 0 0 0
........................................................................................................................................................................................................................AGATTTTTGCACAACTTGAAAT............ 22 0 4 10.50 42 25 1 16 0 0 0 0 0 0 0 0
.......................................................................................................................................TGCGAACTTTGTTCGTTCTCGGAGCAT........................................................................................ 27 0 3 10.00 30 1 28 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................CCTCAATGATCTTAGACCTGCCTAT............................................................... 25 0 3 9.33 28 0 1 0 26 0 0 0 0 1 0 0
........................................................................................................................................................................................................................AGATTTTTGCACAACTTGAAATACTTT....... 27 0 4 8.00 32 23 0 5 0 0 2 2 0 0 0 0
...................................................................................................................................................................................................................ACAATAGATTTTTGCACAACTTGAAAT............ 27 0 4 7.50 30 14 0 12 2 0 0 0 2 0 0 0
..........................................................................................................................................................CGGAGCATCCTCAATGATCTTAGACC...................................................................... 26 0 4 7.25 29 11 0 7 0 0 7 4 0 0 0 0
..........................................................................................................................................................CGGAGCATCCTCAATGATCTTAGACCT..................................................................... 27 0 3 6.67 20 8 0 11 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................AGATTTTTGCACAACTTGAAATACTT........ 26 0 4 6.25 25 15 0 5 0 0 3 2 0 0 0 0
....................................................................................................................................................CGTTCTCGGAGCATCCTCAATGATCTT........................................................................... 27 0 3 5.67 17 7 1 3 2 4 0 0 0 0 0 0
........................................................................................................................................................CTCGGAGCATCCTCAATGATCTT........................................................................... 23 0 4 5.00 20 10 2 3 5 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AGATTTTTGCACAACTTGAAATACT......... 25 0 4 4.75 19 4 0 1 0 0 13 1 0 0 0 0
......................................................................................................................................................................................................................ATAGATTTTTGCACAACTTGAAAT............ 24 0 4 4.50 18 13 4 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AATAGATTTTTGCACAACTTGAAAT............ 25 0 4 4.25 17 7 1 6 0 0 0 3 0 0 0 0
..................................................................................................................................................................CCTCAATGATCTTAGACCTGCCTA................................................................ 24 0 3 3.33 10 0 0 0 9 1 0 0 0 0 0 0
.......................................................................................................................................................TCTCGGAGCATCCTCAATGATCTTAGAC....................................................................... 28 0 4 3.25 13 6 4 2 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................................CGACAATAGATTTTTGCACAACTTGAAAT............ 29 0 4 3.25 13 0 0 13 0 0 0 0 0 0 0 0
.....................................................................................................................AATGTTTATTTATAAAATTGCGAACTT.......................................................................................................... 27 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................TTATTTATAAAATTGCGAACTTTGTT...................................................................................................... 26 0 3 3.00 9 3 2 4 0 0 0 0 0 0 0 0
.....................................................................................................................................................GTTCTCGGAGCATCCTCAATGATCTT........................................................................... 26 0 4 2.75 11 2 1 0 0 7 0 1 0 0 0 0
......................................................................................................................................................TTCTCGGAGCATCCTCAATGATCTT........................................................................... 25 0 4 2.75 11 0 2 0 0 2 0 1 6 0 0 0
..........................................................................................................................................................CGGAGCATCCTCAATGATCTT........................................................................... 21 0 4 2.75 11 2 1 0 5 0 0 0 3 0 0 0
................................................................................................................................................................ATCCTCAATGATCTTAGACCTGCCT................................................................. 25 0 3 2.33 7 2 0 2 0 0 1 2 0 0 0 0
......................................................................................................................................TTGCGAACTTTGTTCGTTCTCGGAGCAT........................................................................................ 28 0 3 2.33 7 3 3 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................AGCATCCTCAATGATCTTAGACCTGCCT................................................................. 28 0 3 2.33 7 1 0 0 3 1 2 0 0 0 0 0
..............................................................................................................................................................................................................................TTGCACAACTTGAAAT............ 16 0 4 2.25 9 1 8 0 0 0 0 0 0 0 0 0
......................................................................................................................ATGTTTATTTATAAAATTGCGAACTTTGT....................................................................................................... 29 0 1 2.00 2 0 0 1 0 0 0 1 0 0 0 0
...............................................................AGACTTCTTATACATTGTCTGTCTTGTTT.............................................................................................................................................................. 29 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
.......................................................................................................................TGTTTATTTATAAAATTGCGAACTT.......................................................................................................... 25 0 3 1.67 5 2 0 1 0 0 0 2 0 0 0 0
...................................................................................................................................................TCGTTCTCGGAGCATCCTCAATGATCTT........................................................................... 28 0 3 1.67 5 5 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................GAACTTTGTTCGTTCTCGGAGCATCCT..................................................................................... 27 0 3 1.67 5 1 4 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TCGGAGCATCCTCAATGATCTT........................................................................... 22 0 4 1.50 6 4 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................TGCGAACTTTGTTCGTTCTCGGAG........................................................................................... 24 0 3 1.33 4 0 4 0 0 0 0 0 0 0 0 0
..........................................................................................................................TTATTTATAAAATTGCGAACTTTGT....................................................................................................... 25 0 3 1.33 4 3 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................TCGGAGCATCCTCAATGATCTTAGAC....................................................................... 26 0 4 1.25 5 1 3 1 0 0 0 0 0 0 0 0
........................................................................................................................................................CTCGGAGCATCCTCAATGATCTTAGACCT..................................................................... 29 0 3 1.00 3 0 0 3 0 0 0 0 0 0 0 0
........................................................................................................................................................CTCGGAGCATCCTCAATGATCTTAGA........................................................................ 26 0 4 1.00 4 4 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................GGCATCCTCAATGATCTTAGACCTGCCT................................................................. 28 1 3 1.00 3 0 0 0 3 0 0 0 0 0 0 0
.......................................................................................................................................................TCTCGGAGCATCCTCAATGATCTTA.......................................................................... 25 0 4 1.00 4 0 4 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TCTCGGAGCATCCTCAATGATCT............................................................................ 23 0 4 1.00 4 0 1 0 0 3 0 0 0 0 0 0
............................................TTTTCCCATTCGGTATGAGAGACTT..................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................TTGCGAACTTTGTTCGTTCTCGGAG........................................................................................... 25 0 3 1.00 3 0 3 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TCTCGGAGCATCCTCAATGATCTTAG......................................................................... 26 0 4 1.00 4 0 0 0 0 0 4 0 0 0 0 0
.......................................................................................................................TGTTTATTTATAAAATTGCGAACTTTGT....................................................................................................... 28 0 3 1.00 3 3 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................TCAATGATCTTAGACCTGCCTATCC............................................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................ATCCTCAATGATCTTAGACCTGCCTAT............................................................... 27 0 3 1.00 3 3 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................CTCAATGATCTTAGACCTGCCTAT............................................................... 24 0 3 1.00 3 0 0 0 3 0 0 0 0 0 0 0
..........................................................................................................................................................CGGAGCATCCTCAATGATCTTAGACCTGC................................................................... 29 0 3 1.00 3 1 0 2 0 0 0 0 0 0 0 0
....................AGAAAGAGAGAATGAACTTATGTTTTTT.......................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................ATGTTTATTTATAAAATTGCGAACTT.......................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.................................GAACTTATGTTTTTTCCCATTCGGT................................................................................................................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................CTCGGAGCATCCTCAATGATCTTAGAC....................................................................... 27 0 4 0.75 3 0 0 1 0 0 1 1 0 0 0 0
.............................................................................................................................................................AGCATCCTCAATGATCTT........................................................................... 18 0 4 0.75 3 0 0 0 0 0 0 0 3 0 0 0
...........................................................................................................................................................GGAGCATCCTCAATGATCTTAGACC...................................................................... 25 0 4 0.75 3 0 0 0 0 0 2 1 0 0 0 0
.......................................................................................................................TGTTTATTTATAAAATTGCGAACTTT......................................................................................................... 26 0 3 0.67 2 0 0 1 0 0 1 0 0 0 0 0
..................................................................................................................................................TTCGTTCTCGGAGCATCCTCAATGATCTT........................................................................... 29 0 3 0.67 2 0 0 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................AGCATCCTCAATGATCTTAGACCTGC................................................................... 26 0 3 0.67 2 0 0 0 2 0 0 0 0 0 0 0
.......................................................................................................................................TGCGAACTTTGTTCGTTC................................................................................................. 18 0 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................TTGCGAACTTTGTTCGTTCTCGGAGC.......................................................................................... 26 0 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................TGCGAACTTTGTTCGTTCTCGGAGC.......................................................................................... 25 0 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................TCCTCAATGATCTTAGACCTGCCT................................................................. 24 0 3 0.67 2 0 0 0 2 0 0 0 0 0 0 0
....................................................................................................................................................CGTTCTCGGAGCATCCTCAATGATCT............................................................................ 26 0 3 0.67 2 0 0 1 0 1 0 0 0 0 0 0
................................................................................................................................................TGTTCGTTCTCGGAGCAT........................................................................................ 18 0 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................CATCCTCAATGATCTTAGACCTGCCT................................................................. 26 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................ATAAAATTGCGAACTTTGTTCGT................................................................................................... 23 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GTTTATTTATAAAATTGCGAACTTTGT....................................................................................................... 27 0 3 0.67 2 0 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................CAATAGATTTTTGCACAACTT................. 21 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TCTCGGAGCATCCTCAA.................................................................................. 17 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0
................................................................................................................................................................ATCCTCAATGATCTTAGAC....................................................................... 19 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TCTCGGAGCATCCTCAATGATCTTAGA........................................................................ 27 0 4 0.50 2 0 0 0 2 0 0 0 0 0 0 0
.......................................................................................................................................................TCTCGGAGCATCCTCAATG................................................................................ 19 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................................GAGCATCCTCAATGATCTTAGACC...................................................................... 24 0 4 0.50 2 0 0 0 0 0 0 2 0 0 0 0
.......................................................................................................................................................TCTCGGAGCATCCTCAATGAT.............................................................................. 21 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TCTCGGAGCATCCTCAATGA............................................................................... 20 0 4 0.50 2 0 1 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................AGATTTTTGCACAACTTGAAATAC.......... 24 0 4 0.50 2 0 0 1 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................................AGATTTTTGCACAACTTGAAATACTTTCGA.... 30 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CAATAGATTTTTGCACAACTTGAA.............. 24 0 4 0.50 2 0 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................TCGGAGCATCCTCAATG................................................................................ 17 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................GCTCGGAGCATCCTCAATGATCTT........................................................................... 24 1 4 0.50 2 0 0 0 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CAATAGATTTTTGCACAACTTGAAA............. 25 0 4 0.50 2 0 0 0 0 2 0 0 0 0 0 0
.............................................................................................................................................................................................CCAACTTTTTGAAGTA............................................. 16 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TCTCGGAGCATCCTCAATGGTCTTAGACCT..................................................................... 30 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................TTGTTCGTTCTCGGAGCATCCTCAA.................................................................................. 25 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................ATAAAATTGCGAACTTTGT....................................................................................................... 19 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................ATTTATAAAATTGCGAACTTTGTT...................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................AGCATCCTCAATGATCTTAGACCTG.................................................................... 25 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................TCGTTCTAGGAGCATCCTCAATGATCTT........................................................................... 28 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................CGGAGCATCCTCAATGATCTTAGACCTG.................................................................... 28 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................TCCTCAATGATCTTAGACCTGTCTAT............................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................ATATTTATAAAATTGCGAACTTTGTT...................................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................GCGAACTTTGTTCGTTCTCGGAGCATC....................................................................................... 27 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................AGCATCCTCAATGATCTTAGACCT..................................................................... 24 0 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................TGCGAACTTTGTTCGTTCT................................................................................................ 19 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................TTTATTTATAAAATTGCGAACTTTGTT...................................................................................................... 27 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................TTTATAAAATTGCGAACTT.......................................................................................................... 19 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................AAATTGCGAACTTTGTT...................................................................................................... 17 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................GTTTATTTATAAAATTGCGAACTT.......................................................................................................... 24 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................TGTTCGTTCTCGGAGCATCCTCAATGAT.............................................................................. 28 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TGATCTTAGACCTGCCTATG.............................................................. 20 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................TTATAAAATTGCGAACT........................................................................................................... 17 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................GAACTTTGTTCGTTCTCGGAGC.......................................................................................... 22 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................TTGCGAACTTTGTTCGTT.................................................................................................. 18 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................GCGAACTTTGTTCGTTCTCGGAGCAT........................................................................................ 26 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................CGTTCTCGGAGCATCCTCAATGATC............................................................................. 25 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................TCGTTCTCGGAGCATC....................................................................................... 16 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................CTCAATGATCTTAGACCTGCCTA................................................................ 23 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................CGAACTTTGTTCGTTCTCGGAGCAT........................................................................................ 25 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................GTTCGTTCTCGGAGCATCCTCAATGAT.............................................................................. 27 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................TATTTATAAAATTGCGAACTTTGT....................................................................................................... 24 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................TCAATGATCTTAGACCTGCCT................................................................. 21 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................CGTTCTCGGAGCATCCTCAATGATCTTA.......................................................................... 28 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................TCGTTCTCGGAGCAT........................................................................................ 15 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................CCTCAATGATCTTAGACCTGCCT................................................................. 23 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................GGAGCATCCTCAATGATCTTAGACCT..................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................ATGATCTTAGACCTGCCT................................................................. 18 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................CGTTCTCGGAGCATCCTCAATGGT.............................................................................. 24 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TTTTTGCACAACTTGAAATACTTT....... 24 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................GGCATCCTCAATGATCTT........................................................................... 18 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CGGCAATAGATTTTTGCACAACTTGAAAT............ 29 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................GTTCTCGGAGCATCCTCAATGAT.............................................................................. 23 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................TCTCGGAGCATCCTCAATGATCTTAGACC...................................................................... 29 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TTAGATTTTTGCACAACTTGAAAT............ 24 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................AAAAAATAGATTTTTGCACAACTTGAAAT............ 29 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TCTCGGAGCATCCTCAATGATCGT........................................................................... 24 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AATAGATTTTTGCACAACTTGCAAT............ 25 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................TCGGAGCATCCTCAATGA............................................................................... 18 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................CGGAGCATCCTCAATGATCTTACAC....................................................................... 25 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................TTCTCGGAGCATCCTCAATGAT.............................................................................. 22 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TGCACAACTTGAAAT............ 15 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TAGACCTGCCTCTGCCAAAT........................................................ 20 3 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................CGGCAATAGATTTTTGCACAACTTGAA.............. 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CAATAGATTTTTTCACAACTTGAAAT............ 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TCGGAGCATCCTCAATGAT.............................................................................. 19 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AGATTTTTGTACAACTTGAAAT............ 22 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TTTGCACAACTTGAAATA........... 18 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCAATGGATTTTTGCACAACTTGAAA............. 26 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AATAGATTTTTGCACAACTTGAGAT............ 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................TCTACATTGTCTGTCTTGCTT.............................................................................................................................................................. 21 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TTAGTTCTCGGAGCATCCTCAATGAT.............................................................................. 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................ATTTTTGCACAACTTGAAAT............ 20 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CAATAGATTTTTGCACA..................... 17 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GACAATAGATTTTTGCACAACTTGAAAT............ 28 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CAATAGATTTTTGCACAACTTGAAAA............ 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TTGCACAACTTGAAATAC.......... 18 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................CGGAGCATCCTCAATGATCTTAGA........................................................................ 24 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GACAATAGATTTTTG......................... 15 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AATAGATTTTTGCACAACTTGAAATC........... 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TAGATTTTTGCACAACTTGAAAT............ 23 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................TTAATAGATTTTTGCACAACTTGAAAT............ 27 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AGATTTTTGCACAACTTTAAATACT......... 25 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................AAAAAATTGCGAACTTTGTT...................................................................................................... 20 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................TCTCGGAGCATCCTCAACGATCTT........................................................................... 24 1 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................TCAATAGATTTTTGCACAACTTGAAAT............ 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TCTCGCAGCATCCTCAATGATCTT........................................................................... 24 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................CTCGGAGCATCCTCAATGATCT............................................................................ 22 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CGACAATAGATTTTTGCACAACTT................. 24 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................ATGCACAACTTGAAATAC.......... 18 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TCTCGGAGCATCCTCAACG................................................................................ 19 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TTCTTGCACAACTTGAAAT............ 19 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TCGGAGCATCCTCAA.................................................................................. 15 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGTTTATTTATAAAATTG................................................................................................................. 18 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0
......................................................GGATATGAGAGACTCCTTAT................................................................................................................................................................................ 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TCTCCGCATCCTCAATGATCTTAGAC....................................................................... 26 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
..............................AATGAACCAAGGTTTTTTCCC....................................................................................................................................................................................................... 21 3 7 0.14 1 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................TCGGAGCATCCCCAATCA............................................................................... 18 2 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CTGCATCCTCAATGAT.............................................................................. 16 2 15 0.07 1 0 1 0 0 0 0 0 0 0 0 0
......................................................CGGTATGAGAGACCT..................................................................................................................................................................................... 15 1 18 0.06 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................CTAAGCTTGCGAACTTTGT....................................................................................................... 19 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 1
........................................................................ATACATTGTCTGTCTT.................................................................................................................................................................. 16 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 4:889773-890022 + dsi_12665 TCTATT--CGG--------------------------------------CTTGTAATATTTCTTTCTCTCT---------------------------------------------------------------TACTTGAATACAAAAAAGGGTAAGCCATACTCTC--TGAAGAATATGTAACAGACAGAACAAAGAGGAT---------------------------------------------------------------GTAT--------------ACCTAACATTAGGCATTACAA-----ATAAATAT--------TTTAACGCT-TGAAACAAGCAAGAGCCTCGTAGGAGTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------CGGGT--TG---------------------AAAAACTTCATCTATGCTGTTATCTAAAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGCTA----AAT
droSec2 scaffold_40:151143-151408 + TCTATT--CGG--------------------------------------CTTGTAATATTTCTTTCTCTCT---------------------------------------------------------------TACTTGTATACAAAAAAGGGTAAGCCATACTCTC--TGAAGAATATGTAACAAACAGAACAAAGAGGAT---------------------------------------------------------------GTAT--------------ACCTAACATTAGGCATAACAA-----ATAAATAT--------TTTAACGCT-TAAAACAAGCAAGAGCCTCGTAGGAGTTACTAGAATCTGGACGGAAAACTTCAAA----AAAAAAC----------------------------------------TG-----------CTGGT--TG---------------------A-AAACTTCATCCATGCTGTTATCTAAAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGCTA----AAT
dm3 chr3L:23953702-23953903 - ATTAAA--CTT--------------------------------------ATAAAAAATCTACTTTT----------------------------------------------ATAC-------CCGT-------CACTCGTAGA-ATAAAAGGGTATTCTAGATTCGT--TGAAAAATATGTAACAGGAAGAAGGAAG---------------------------------------------------------------------CGT--------------TTCCGACT-------ATACATATAAAGTATATAG--------TAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------ACGG--------------------------------------TTTTTGTTTTGAGTCAAGCAAATGATCTGTATTTAAACTAAGATCAACGCCGATATAAATAAAAAC----------------------------------------------------------------------TCC
droEre2 scaffold_4512:155263-155640 - TCAGCA--GG-------------------------------------------TAATTTTTGTACATCCCT---------------------------------------------------------------TATTTGTAGAAAATAAGAGGTAAACCATACCCGCGTAGAAGAATATGTAACAGGCAGAACGAAAAGGAACTACGTGCAATTACTATTTCTCCAATTTTTAGTTTGTTACTTACATCATG---TG---TATGTATGTGTGTATGTTTGTATA-----------ACAAAAGAA-----ATAAAT-------------AACGTTTTGAAAGTAACTTGCGCCTCGTAGGAGTTACTAGAATCTTCACGAATAACTTAAACTTTCTAATAACTTAGTTTCCGTGGTTTTTGACGTTCATACGGACGGATCGACTATGTTAGTGATCAGGTTTTG---------------------AAAAACTTCCT-TAAGCTGTTATCTAAAAAAGCGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------CTTATAAAAGTTA----TAA
droYak3 v2_chrUn_1919:3468-3654 + TTTATA--TGG--------------------------------------TCGGAAACGCTTCCTTCTGCCTGTTACATAC-------TTTTCAACGAATCAAGTATACCCTTTTACTC--TACGAGTAACGGG---------------------TATAAA-----------------------------------------------------------------------------------TATT------TAATATA------------------------------CATTTCGAACAATAA-----ATTAATAA--------TTTATGAAA-TTA-AAAA------C-----------------------------------------------------------------------------------------------------------------AAGAGAGAACGCTATAGTCGA------------------------------------------------------------------------------------------------------------GTTCCCCGACTATCT--------------------------------------------GATACCA----GTT
droEug1 scf7180000409533:491075-491293 + TTTATA--GGG--------------------------------------TCGGAAACGGTTCCTTCTACCTCTTACATCA-------TTTTCAACGAATCTAATATACCCCTATACTC--TATGGATAACGGG---------------------TATAAA-----------------------------------------------------------------------------------AACC------ACGTAAGTAACGCGTATAG------------------------------TAA-----GATTGTAAGTAACGGGTTTA----------ATAAGCATGAAGCTCATACAGA------------------------------------------------------------------------CAGACGGACA-----------TAGCT--TA---------------------ACAGACTTCGCTTTTAATACTGATCAAGAA--CATGT-ACAC-----------------------------------------------------------------------------------------------------------------------TTTA---------------T
droBia1 scf7180000301495:836725-836889 + TTTATG--GGG--------------------------------------TCGGAAACGCTTCCTTCTACCTTTTACATAC-------TTTCCGAGGAATCTAGTCTACCCTTTTACTC--TACGAGTAACAAGT-------A---AATAAAAAACAATTTACTGGTTC--AAAATAT--------------------------------------------------------------------------------------------------------------------------ATAAAA-----ATAAATGG--------CATCA-----AAAG-------------------------------------------------------------------------------------------------------------------------------------------------AATA--------------------------------------TTTTTA---------------------------------------------------------------------TTATTG--------------------------------------------GTAAGCA----AAA
droTak1 scf7180000415261:174501-174657 - TTTATA--GGG--------------------------------------TCGGAAATGCTTCCTTCTAGCTGTTACATAC-------TTTTGCACGAATAAAATATACCCTTTTACTC--TACGAGTAACGGGT-------ATA-ATAAAAATACAATTTTGT---------------------------ATAGAAGG---------------------------------------------------------------------CGA--------------C-------TCAGGCCTTACAAATAT----TATTT--------TTTATTTAT-TGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAA
droEle1 scf7180000490635:28904-28961 + TTAAAT--A---------------------------------------------------------------------------------------------------------------------------------------GAGTAAAGGGTAAATTGTATTCTT--TAAAAATTAAATAACAGATAGAATAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000776832:4043-4297 - TTTATA--GGG--------------------------------------TCGGAAACGCTTCCTTCTAGCTGTTACATAC-------TTTTGCACGAATACAATATACCCTTTTACTC--TACGAGTAACGGG---------------------TATAAT-----------------------------------------------------------------------------------TATTATCATAATATAAATTAAATTTATAT----------------AAATATTTGTAT-----------------ATTAACTATTTTAATAAT-T---------TAGAA-----------------------------------------------------------------------------------------------------------------AAAAGAAAAAGCCAAAGGGGA-----------------------------------------------------------------------------------------------A--ACAAAATAGATTTGCGCG-CTTTCTTTCCAAAAAATCTTCAAATCAAATTTAAAAGGCACAAAATCATTAAACCTA----ATT
droFic1 scf7180000453385:8809-8828 + TCTATT--CTG--------------------------------------CTCGTGATGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302405:388488-388533 + ATATAA--A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAAAA-----ATAAATAT--------TTTAAAATT-TAAAATGGGCAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396569:557493-557548 + TTTGTT--TAT--------------------------------------TTTGA-TTATTGCTTTCTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCAAG----GAGTTTTACTTTCCG---------------------------------------------------------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
dp5 3:740118-740137 + TCGACT--CGG--------------------------------------CTATTGATGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_678:8248-8464 - TCGACT--CGGCTATTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGATTCCTTCTGGACGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAATACTCATTTTGAGTATCGGG---------------------TATAAA-----------------------------------------------------------------------------------AATAAACAAA----GAGTTACAAGTTTTG--------------------------------------------------------------------------------------------------------ATAGA-------------------------------------------------------------TA-----------CGGG--------------------------AGCAACTTC-------CTGTTATATAAAAA--AG----GGAA-----------------------------------------------------------------------------------------------------------------------TTTACGAAA-ATA----AAA
droWil2 scf2_1100000004884:203843-203911 - TTCCTT--T-----------------------------------------------------------------------------------------------------------------------------TACACCCATGCAAAAAAGGGTATATTACTTTAGG--TCAAAAGTATGCAACGCATAGAAGAAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12942:11464-11560 - TCGACGCGGGG--------------------------------------TCGGAGATACTTCCTTCTGCCGATGAT------------------------TAATATG-----------------------------CTTGAATGCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATGGTAGGGATCCGTACG-CATAC--------------------------------------A-------AAAAGATTTAACA
droMoj3 scaffold_1808:1136-1220 + TGCACA--AAA--------------------------------------CCAA--------------------------------------------------TATACTGATTCACTT--T--CGTGAATGAG---------------------TATAAA-----------------------------------------------------------------------------------AATA------------------------------------------------------------------GAAAG--------CATAACATT-CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATG-TAAAA--------------------------------------A-------AAAAAA----CAA
droGri2 scaffold_14906:12727128-12727158 - TTTATG--TGG--------------------------------------TCGGAGATGCTTCCTTCTACCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCTATT--CGG--------------------------------------CTTGTAATATTTCTTTCTCTCT---------------------------------------------------------------TACTTGAATACAAAAAAGGGTAAGCCATACTCTC--TGAAGAATATGTAACAGACAGAACAAAGAGGAT---------------------------------------------------------------GTAT--------------ACCTAACATTAGGCATTACAA-----ATAAATAT--------TTTAACGCT-TGAAACAAGCAAGAGCCTCGTAGGAGTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------CGGGT--TG---------------------AAAAACTTCATCTATGCTGTTATCTAAAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGCTA----AATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGC.........25261.001220000000902300000000
.........................................................................................................................................................................................................................................................................................................................................................................GTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------...................................................................................................................................................................................................................22340.001200001008403113000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGC.........27228.0056000000541280000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTATCTAAAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------T...................24421.00840000000371460000000
......................................................................................................................................................................................................................................................................................................................................................................GGAGTTACTAGAATCTGGACGGA-------------------------------------------------------------T...............................................................................................................................................................................................................................24316.33490000000273190000000
......................................................................................................................................................................................................................................................................................................................................................................GGAGTTACTAGAATCTGGACGGA-------------------------------------------------------------................................................................................................................................................................................................................................23312.67380000000240140000000
....................................................................................................................................................................................................................................................................................................................................................................TAGGAGTTACTAGAATCTGGACGGA-------------------------------------------------------------................................................................................................................................................................................................................................25312.3337000000161290000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGCTA----AA.27212.00240000000130110000000
................................................................................................................................................................................................................................................................................................................................................TGAAACAAGCAAGAGCCTCGTAGGAGT...............................................................................................................................................................................................................................................................................................................27310.67320000002133131000000
......................................................................................................................................................................................................................................................................................................................................................................GGAGTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------...................................................................................................................................................................................................................25310.33310000000190120000000
.......................................................................................................................................................................................................................................................................................................................................................................GAGTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------...................................................................................................................................................................................................................2438.6726000000024020000000
.......................................................................................................................................................................................................................................................................................................................................................................GAGTTACTAGAATCTGGACGGA-------------------------------------------------------------T...............................................................................................................................................................................................................................2335.0015000000015000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGC.........2425.001000000009001000000
.........................................................................................................................................................................................................................................................................................................................................................................GTTACTAGAATCTGGACGGA-------------------------------------------------------------T...............................................................................................................................................................................................................................2135.001500000080403000000
.........................................................................................................................................................................................................................................................................................................................................................................GTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------C..................................................................................................................................................................................................................2334.671400000050504000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGCTA----AA.2924.50900000007110000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTATCTAAAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TT..................2544.2517000000031130000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGCTA----...2724.00800000004040000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGCTA----A..2823.50700000004120000000
..............................................................................................................................................................................................................................................................................................................................................T-TGAAACAAGCAAGAGCCTCGTAGGAGT...............................................................................................................................................................................................................................................................................................................2833.00900000004050000000
......................................................................................................................................................................................................................................................................................................................................................................GGAGTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------C..................................................................................................................................................................................................................2633.00900000004050000000
.................................................................................................................................................................................................................................................................................................................................................................TCGTAGGAGTTACTAGAATCTGGACGGA-------------------------------------------------------------................................................................................................................................................................................................................................2833.00900000002070000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAG..........2622.50500000005000000000
...................................................................................................................................................................................................................................................................................................................................................................GTAGGAGTTACTAGAATCTGGACGGA-------------------------------------------------------------................................................................................................................................................................................................................................2632.33700000001060000000
................................................................................................................................................................................................................................................................................................................................................TGAAACAAGCAAGAGCCTCGTAGGAGTT..............................................................................................................................................................................................................................................................................................................2832.33700000005020000000
.........................................................................................................................................................................................AGACAGAACAAAGAGGAT---------------------------------------------------------------GTA.............................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000000000020000
...........................................................................................................................................................................................................................................................................................................................................................................TACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------CGGGT--............................................................................................................................................................................................................2512.00200000020000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAG..........2422.00400000003010000000
..............................................................................................................................................................................................................................................................................................................................................T-TGAAACAAGCAAGAGCCTCGTAGGAGTT..............................................................................................................................................................................................................................................................................................................2932.00600000014010000000
.........................................................................................................................................................................................................................................................................................................................................................................GTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------CGGG...............................................................................................................................................................................................................2612.00200000000200000000
...........................................................................................................................................................................................................................................................................................................................................................AGAGCCTCGTAGGAGTTACTAGAATC.....................................................................................................................................................................................................................................................................................................2641.75700000000016000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTATCTAAAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTT.................2641.75700000006010000000
.........................................................................................................................................................................................................................................................................................................................................................................GTTACTAGAATCTGGACGGA-------------------------------------------------------------................................................................................................................................................................................................................................2031.67500000040001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGCT........2621.50300000003000000000
.........................................................................................................................................................................................................................................................................................................................AATAT--------TTTAACGCT-TGAAACAAGCAAGA............................................................................................................................................................................................................................................................................................................................2831.33400000004000000000
................................................................................................................................................................................................................................................................................................................................................TGAAACAAGCAAGAGCCTCGTAGGA.................................................................................................................................................................................................................................................................................................................2531.33400000020200000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAA............2441.25500000004010000000
................................................................................................................................................................................................................................................................................................................................................TGAAACAAGCAAGAGCCTCGTAGG..................................................................................................................................................................................................................................................................................................................2431.00300000012000000000
..........................................................................................................................................................................TGAAGAATATGTAACAGACAGAACAAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................TAGGAGTTACTAGAATCTGGA.................................................................................................................................................................................................................................................................................................2131.00300000000120000000
....................................................................................................................................................................................................................................................................................................................................................................TAGGAGTTACTAGAATCTGGACGG..............................................................................................................................................................................................................................................................................................2431.00300000000120000000
.........................................................................................................................................................................................................................................................................................................................................................................GTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------T..................................................................................................................................................................................................................2331.00300000020100000000
TCTATT--CGG--------------------------------------CTTGTAATATTTCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
......................................................................................................................................................................................................AGGAT---------------------------------------------------------------GTAT--------------ACCTAACATTAGGCATT.............................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
...................................................................................................................................................................................TGTAACAGACAGAACAAAGAGGAT---------------------------------------------------------------GTA.............................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................GTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------CG.................................................................................................................................................................................................................2411.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGC.........2321.00200000002000000000
..........................................................................................................................................................TAAGCCATACTCTC--TGAAGAATATGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................TAT--------TTTAACGCT-TGAAACAAGCAAGA............................................................................................................................................................................................................................................................................................................................2631.00300000010020000000
.....................................................................................................................................................................................................GAGGAT---------------------------------------------------------------GTAT--------------ACCTAACATTAGGCA...............................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
.........................................................................................................................................................................................................................................................................................................................................................CAAGAGCCTCGTAGGAGTTACTAGA........................................................................................................................................................................................................................................................................................................2540.75300000003000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAA...........2340.75300000001020000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAA...........2540.75300000002010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTATCTAAAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTA................2740.75300000003000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTAAAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATG..............2640.75300000002010000000
..........................................................................................................................................................................................................................................................................................................................................................AAGAGCCTCGTAGGAGTTACTAGAATC.....................................................................................................................................................................................................................................................................................................2740.75300000000003000000
........................................................................................................................................................................................................................................................................................................................................................................AGTTACTAGAATCTGGACGGA-------------------------------------------------------------T...............................................................................................................................................................................................................................2230.67200000000200000000
....................................................................................................................................................................................................................................................................................................................................................................TAGGAGTTACTAGAATCTGGACG...............................................................................................................................................................................................................................................................................................2330.67200000000020000000
.............................................................................................................................................................................................................................................................................................................................................................AGCCTCGTAGGAGTTACTAGAATCTGGA.................................................................................................................................................................................................................................................................................................2830.67200000001001000000
....................................................................................................................................................................................................................................................................................................................................................................TAGGAGTTACTAGAATCTGGACGGA-------------------------------------------------------------A...............................................................................................................................................................................................................................2630.67200000000020000000
........................................................................................................................................................................................................................................................................................................................................................GCAAGAGCCTCGTAGGAGT...............................................................................................................................................................................................................................................................................................................1930.67200000000011000000
.........................................................................................................................................................................................................................................................................................................................................................................GTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------TT.................................................................................................................................................................................................................2430.67200000010100000000
........................................................................................................................................................................................................................................................................................................................................................................AGTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------...................................................................................................................................................................................................................2330.67200000000020000000
...................................................................................................................................................................................................................................................................................................................................................................GTAGGAGTTACTAGAATCTGGACGG..............................................................................................................................................................................................................................................................................................2530.67200000000020000000
....................................................................................................................................................................................................................................................................................................................................................................TAGGAGTTACTAGAATCTGGACGGA-------------------------------------------------------------T...............................................................................................................................................................................................................................2630.67200000002000000000
.........................................................................................................................................................................................................................................................................................................................................................................GTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------CTT................................................................................................................................................................................................................2530.67200000010100000000
......................................................................................................................................................................................................................................................................................................................................................................GGAGTTACTAGAATCTGGACGG..............................................................................................................................................................................................................................................................................................2230.67200000001010000000
........................................................................................................................................................................................................................................................................................................................................................................AGTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------C..................................................................................................................................................................................................................2430.67200000000020000000
................................................................................................................................................................................................................................................................................................................................................TGAAACAAGCAAGAGCCTCGTAGGAG................................................................................................................................................................................................................................................................................................................2630.67200000001010000000
..........................................................................................................................................................................................................................................................................................................................................ACGCT-TGAAACAAGCAAGAGCCTCGT.....................................................................................................................................................................................................................................................................................................................2630.67200000000011000000
.....................................................................................................................................................................................................................................................................................................................................................................AGGAGTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------...................................................................................................................................................................................................................2630.67200000002000000000
..............................................................................................................................................................................................................................................................................................................................................T-TGAAACAAGCAAGAGCCTCGTAGGA.................................................................................................................................................................................................................................................................................................................2630.67200000000020000000
...................................................................................................................................................................................................................................................................................................................................................AACAAGCAAGAGCCTCGTAGGAGT...............................................................................................................................................................................................................................................................................................................2430.67200000000011000000
.........................................................................................................................................................................................................................................................................................................................................................................GTTACTAGAATCTGGA.................................................................................................................................................................................................................................................................................................1630.67200000000002000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGCTA----AA.2820.50100000001000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGCTA----A..2720.50100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGCTA----AT.2920.50100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGCT........1820.50100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGCTA----AAA2820.50100000001000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGCTA----A..2620.50100000010000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGCA........2820.50100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTAAAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAA............2840.50200000000020000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGCTA----...2520.50100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGCTA----AA.2420.50100000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGCTA----AA.2120.50100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGCTA----AAA2920.50100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGCTA----...2620.50100000001000000000
.......................................................................................................................................................................................................................................................................................................................................TTAACGCT-TGAAACAAGCAAGAGCCTCGTA....................................................................................................................................................................................................................................................................................................................3030.33100000001000000000
.................................................................................................................................................................................................................................................................................................................................................GAAACAAGCAAGAGCCTCGTAGGAGTT..............................................................................................................................................................................................................................................................................................................2730.33100000001000000000
.........................................................................................................................................................................................................................................................................................................................AATAT--------TTTAACGCT-TGAAACAAG.................................................................................................................................................................................................................................................................................................................................2330.33100000001000000000
................................................................................................................................................................................................................................................................................................................................................TGAAACAAGCAAGAGCCTCGTAGGAGA...............................................................................................................................................................................................................................................................................................................2730.33100000001000000000
.................................................................................................................................................................................................................................................................................................................................................................TCGTAGGAGTTACTAGAATCTGGA.................................................................................................................................................................................................................................................................................................2430.33100000000010000000
...........................................................................................................................................................................................................................................................................................................................................CGCT-TGAAACAAGCAAGAGCCTCGTAGG..................................................................................................................................................................................................................................................................................................................2830.33100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................AGTTACTAGAATCTGGACGGA-------------------------------------------------------------................................................................................................................................................................................................................................2130.33100000000010000000
.........................................................................................................................................................................................................................................................................................................................................AACGCT-TGAAACAAGCAAGAGC..........................................................................................................................................................................................................................................................................................................................2230.33100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................GTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------CT.................................................................................................................................................................................................................2430.33100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................GAGTTACTAGAATCTGGACGGA-------------------------------------------------------------................................................................................................................................................................................................................................2230.33100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................TAGGAGTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------...................................................................................................................................................................................................................2730.33100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................CAAGCAAGAGCCTCGTAGGAGT...............................................................................................................................................................................................................................................................................................................2230.33100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................GTAGGAGTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------C..................................................................................................................................................................................................................2930.33100000000100000000
................................................................................................................................................................................................................................................................................................................................................TGAAACAAGCAAGAGCC.........................................................................................................................................................................................................................................................................................................................1730.33100000001000000000
................................................................................................................................................................................................................................................................................................................................................................CTCGTAGGAGTTACTAGAATCTGGAC................................................................................................................................................................................................................................................................................................2630.33100000010000000000
..................................................................................................................................................................................................................................................................................................................................................AAACAAGCAAGAGCCTCGTAGGAGTTAC............................................................................................................................................................................................................................................................................................................2830.33100000000010000000
......................................................................................................................................................................................................................................................................................................................................TTTAACGCT-TGAAACAAGCAAGAGC..........................................................................................................................................................................................................................................................................................................................2530.33100000000001000000
.........................................................................................................................................................................................................................................................................................................................................AACGCT-TGAAACAAGCAAGAGCCTC.......................................................................................................................................................................................................................................................................................................................2530.33100000000001000000
..................................................................................................................................................................................................................................................................................................................................................AAACAAGCAAGAGCCTCGTAGGAGT...............................................................................................................................................................................................................................................................................................................2530.33100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................GTAGGAGTTACTAGAATCTGGACGGA-------------------------------------------------------------A...............................................................................................................................................................................................................................2730.33100000000010000000
..............................................................................................................................................................................................................................................................................................................................................T-TGAAACAAGCAAGAGCCTCGTAGGAG................................................................................................................................................................................................................................................................................................................2730.33100000001000000000
........................................................................................................................................................................................................................................................................................................................................TAACGCT-TGAAACAAGCAAGAGCCTC.......................................................................................................................................................................................................................................................................................................................2630.33100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................GTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------A..................................................................................................................................................................................................................2330.33100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................GTTACTAGAATCTGGACGG..............................................................................................................................................................................................................................................................................................1930.33100000010000000000
..............................................................................................................................................................................................................................................................................................................................................T-TGAAACAAGCAAGAGCCTCGTAAA..................................................................................................................................................................................................................................................................................................................2530.33100000010000000000
...................................................................................................................................................................................................................................................................................................................................................AACAAGCAAGAGCCTCGTAGGAT................................................................................................................................................................................................................................................................................................................2330.33100000000100000000
..............................................................................................................................................................................................................................................................................................................................................T-TGAAACAAGCAAGAGCCTCGTAGGAGTTA.............................................................................................................................................................................................................................................................................................................3030.33100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................AGAATCTGGACGGA-------------------------------------------------------------TA-----------C..................................................................................................................................................................................................................1730.33100000000001000000
....................................................................................................................................................................................................................................................................................................................................................ACAAGCAAGAGCCTCGTAGGAGTTAC............................................................................................................................................................................................................................................................................................................2630.33100000000010000000
........................................................................................................................................................................................................................................................................................................................................TAACGCT-TGAAACAAGCAAGAGC..........................................................................................................................................................................................................................................................................................................................2330.33100000000001000000
....................................................................................................................................................................................................................................................................................................................................................ACAAGCAAGAGCCTCGTAGGAGTTA.............................................................................................................................................................................................................................................................................................................2530.33100000000010000000
..............................................................................................................................................................................................................................................................................................................................................T-TGAAACAAGCAAGAGCCTCGTAGGAT................................................................................................................................................................................................................................................................................................................2730.33100000000100000000
...................................................................................................................................................................................................................................................................................................................................................AACAAGCAAGAGCCTCGTAGGAGTT..............................................................................................................................................................................................................................................................................................................2530.33100000000100000000
........................................................................................................................................................................................................................................................................................................................................TAACGCT-TGAAACAAGCAAGAGCCTCA......................................................................................................................................................................................................................................................................................................................2730.33100000000001000000
.............................................................................................................................................................................................................................................................................................................................................CT-TGAAACAAGCAAGAGCCTCT......................................................................................................................................................................................................................................................................................................................2230.33100000000001000000
.............................................................................................................................................................................................................................................................................................................................................CT-TGAAACAAGCAAGAGCCTCGTAGGAGT...............................................................................................................................................................................................................................................................................................................2930.33100000000010000000
....................................................................................................................................................................................................................................................................................................................................................................TAGGAGTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------C..................................................................................................................................................................................................................2830.33100000000010000000
...................................................................................................................................................................................................................................................................................................................................................................GTAGGAGTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------...................................................................................................................................................................................................................2830.33100000001000000000
.........................................................................................................................................................................................................................................................................................................................................AACGCT-TGAAACAAGCAAGAGCCTCGTA....................................................................................................................................................................................................................................................................................................................2830.33100000000010000000
..............................................................................................................................................................................................................................................................................................................................................T-TGAAACAAGCAAGAGCCTC.......................................................................................................................................................................................................................................................................................................................2030.33100000000010000000
..................................................................................................................................................................................................................................................................................................................................................AAACAAGCAAGAGCCTCGTAGGAGTT..............................................................................................................................................................................................................................................................................................................2630.33100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................GAGTTACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------C..................................................................................................................................................................................................................2530.33100000001000000000
....................................................................................................................................................................................................................................................................................................................................................ACAAGCAAGAGCCTCGTAGGAGT...............................................................................................................................................................................................................................................................................................................2330.33100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................TACTAGAATCTGGACGGA-------------------------------------------------------------TA-----------...................................................................................................................................................................................................................2030.33100000001000000000
................................................................................................................................................................................................................................................................................................................................................TGAAACAAGCAAGAGCCTCGA.....................................................................................................................................................................................................................................................................................................................2130.33100000000010000000
....................................................................................................................................................................................................................................................................................................................................................................TAGGAGTTACTAGAATCTGGACGGT-------------------------------------------------------------................................................................................................................................................................................................................................2530.33100000000010000000
..............................................................................................................................................................................................................................................................................................................................................................GCCTCGTAGGAGTTACTAGAATCTGGA.................................................................................................................................................................................................................................................................................................2730.33100000000010000000
...........................................................................................................................................................................................................................................................................................................................................................AGAGCCTCGTAGGAGTTACTAGAATCTGGA.................................................................................................................................................................................................................................................................................................3030.33100000001000000000
........................................................................................................................................................................................................................................................................................................................................TAACGCT-TGAAACAAGCAAGAGCCTCG......................................................................................................................................................................................................................................................................................................................2730.33100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTATCTAAAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------....................2340.25100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................AGAGCCTCGTAGGAGT...............................................................................................................................................................................................................................................................................................................1640.25100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................CAAGAGCCTCGTAGGAGTTACTAGAA.......................................................................................................................................................................................................................................................................................................2640.25100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTAAAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------....................2040.25100000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTATCTAAAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTAA...............2840.25100000000100000000
...........................................................................................................................................................................................................................................................................................................................................................AGAGCCTCGTAGGAGTTACTAGAAT......................................................................................................................................................................................................................................................................................................2540.25100000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TT..................1640.25100000000010000000
..........................................................................................................................................................................................................................................................................................................................................................AAGAGCCTCGTAGGAGTTACTAGAAT......................................................................................................................................................................................................................................................................................................2640.25100000000001000000
............................................................................................................................................................................................................................................................................................................................................................GAGCCTCGTAGGAGTTACTAGAATC.....................................................................................................................................................................................................................................................................................................2540.25100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................AGAGCCTCGTAGGAGTTACTAGA........................................................................................................................................................................................................................................................................................................2340.25100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................TAGGAGTTACTAGAATAA....................................................................................................................................................................................................................................................................................................1890.11100000000010000000
droSec2
TCTATT--CGG--------------------------------------CTTGTAATATTTCTTTCTCTCT---------------------------------------------------------------TACTTGTATACAAAAAAGGGTAAGCCATACTCTC--TGAAGAATATGTAACAAACAGAACAAAGAGGAT---------------------------------------------------------------GTAT--------------ACCTAACATTAGGCATAACAA-----ATAAATAT--------TTTAACGCT-TAAAACAAGCAAGAGCCTCGTAGGAGTTACTAGAATCTGGACGGAAAACTTCAAA----AAAAAAC----------------------------------------TG-----------CTGGT--TG---------------------A-AAACTTCATCCATGCTGTTATCTAAAAA--CGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------TTTATGAAAGCTA----AATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
ATTAAA--CTT--------------------------------------ATAAAAAATCTACTTTT----------------------------------------------ATAC-------CCGT-------CACTCGTAGA-ATAAAAGGGTATTCTAGATTCGT--TGAAAAATATGTAACAGGAAGAAGGAAG---------------------------------------------------------------------CGT--------------TTCCGACT-------ATACATATAAAGTATATAG--------TAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------ACGG--------------------------------------TTTTTGTTTTGAGTCAAGCAAATGATCTGTATTTAAACTAAGATCAACGCCGATATAAATAAAAAC----------------------------------------------------------------------TCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAACTAAGATCAACGCCGATATAAA................................................................................27112.00120000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030402100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................CT-------ATACATATAAAGTATATAG--------....................................................................................................................................................................................................................................................................................................................................................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005110200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TCGT--TGAAAAATATGTAACAGGAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2618.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000300000000201000000000000000000000000
....................................................................................................................................................................TCGT--TGAAAAATATGTAACAGGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTATTTAAACTAAGATCAACGCCGA......................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTAAACTAAGATCAACGCCGATA....................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TCGT--TGAAAAATATGTAACAGGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTATTTAAACTAAGATCAACGC.........................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAACTAAGATCAACGCCGATA....................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTATTTAAACTAAGATCAACGCC........................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000200000000001000000000000000000000000
....................................................................................................................................................................TCGT--TGAAAAATATGTAACAGGAAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TTCGT--TGAAAAATATGTAACAGGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................AAGAAGGAAG---------------------------------------------------------------------CGT--------------TTCCGACT-------...............................................................................................................................................................................................................................................................................................................................................................................2133.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000200010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................AG---------------------------------------------------------------------CGT--------------TTCCGACT-------ATACATATAAAG...................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TCGT--TGAAAAATATGTAACAGGAAGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................TATTCTAGATTCGT--TGAAAAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000000000000000000000000000001000000000000000
...................................................................................................................................................................TTCGT--TGAAAAATATGTAACAGGAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAACTAAGATCAACGCCGATATA..................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................ACAGGAAGAAGGAAG---------------------------------------------------------------------CGT--------------TTCCGACT-------A..............................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............................................................ACTTTT----------------------------------------------ATAC-------CCGT-------CACTCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................AACAGGAAGAAGGAAG---------------------------------------------------------------------CGT--------------TTCCGAC.......................................................................................................................................................................................................................................................................................................................................................................................2622.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001020000000000000000000000000100000
..................................................................................................................................................................................ATGTAACAGGAAGAAGGAAG---------------------------------------------------------------------C..............................................................................................................................................................................................................................................................................................................................................................................................................2132.3370000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010300000002000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTATTTAAACTAAGATCAACGCCG.......................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTATTTAAACTAAGA................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................TAC-------CCGT-------CACTCGTAGA-ATAAAAGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TTCGT--TGAAAAATATGTAACAGGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................TCCGACT-------ATACATATAAAGTATATAG--------....................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................ATTCTAGATTCGT--TGAAAAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TAAAAAATCTACTTTT----------------------------------------------ATAC-------CCGT-------CACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................AAAATATGTAACAGGAAGAAGGAAG---------------------------------------------------------------------C..............................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................GAAG---------------------------------------------------------------------CGT--------------TTCCGACT-------ATACATATAAAG...................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................CGT--TGAAAAATATGTAACAGGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................G---------------------------------------------------------------------CGT--------------TTCCGACT-------ATACATATAAAG...................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................AAAGGGTATTCTAGATTCGT--T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2161.3380000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000002000000000005000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTTTGAGTCAAGCAAATGATC................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TCGT--TGAAAAATATGTAACAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAACTAAGATCAACGCCGATATAAATA..............................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................AACAGGAAGAAGGAAG---------------------------------------------------------------------CGT--------------TTCCGACT-------A..............................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAAACTAAGATCAACGCCGATATAAA................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TAAAGTATATAG--------TAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------ACGG--------------------------------------TTTTTG.....................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................AG---------------------------------------------------------------------CGT--------------TTCCGACT-------ATACATATAAAGT..................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................T----------------------------------------------ATAC-------CCGT-------CACTCGTAGA-ATAAAAGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................................................AATCTACTTTT----------------------------------------------ATAC-------CCGT-------CAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTATTTAAACTAAGATCAACG..........................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................TGTAACAGGAAGAAGGAAG---------------------------------------------------------------------CGT--------------TTC...........................................................................................................................................................................................................................................................................................................................................................................................2521.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000
.......................................................................................................................................................................................ACAGGAAGAAGGAAG---------------------------------------------------------------------CGT--------------TTCCGAC.......................................................................................................................................................................................................................................................................................................................................................................................2521.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TAG--------TAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------ACGG--------------------------------------TTTTTGTTTTGAGTCG...........................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AC-------CCGT-------CACTCGTAGA-ATAAAAGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTATTTAAACTAAGATCAACGCATC......................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TTTT----------------------------------------------ATAC-------CCGT-------CACTCGTAGA-ATAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCAAATGATCTGTATTTAAACTAAG.................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAACTAAGATCAACGCCGATATAAAT...............................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTAAA--CTT--------------------------------------ATAAAAAATCTACTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAAACTAAGATCAACGCCGA......................................................................................2221.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGATCTGTATTTAAACTA...................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TCGT--TGAAAAATATGTAACAGGAAGAAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAACTAAGATCAACGCCGAT.....................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................T-------CACTCGTAGA-ATAAAAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................AAAATATGTAACAGGAAGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................ATAAAAGGGTATTCTAGATTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTTTTGAGTCAAGCAAATGATCT...............................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................AATCTACTTTT----------------------------------------------ATAC-------CCGT-------CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGTCAAGCAAATGATCTGTATT..........................................................................................................2611.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------ACGG--------------------------------------TTTTTGTTTTGAGTCAAGC........................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................TACTTTT----------------------------------------------ATAC-------CCGT-------CACTCGTAGA-ATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TT--------------------------------------ATAAAAAATCTACTTTT----------------------------------------------ATAC-------CCGT-------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................GTAACAGGAAGAAGGAAG---------------------------------------------------------------------CGT--------------TTC...........................................................................................................................................................................................................................................................................................................................................................................................2421.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................T----------------------------------------------ATAC-------CCGT-------CACTCGTAGA-ATAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................AATCTACTTTT----------------------------------------------ATAC-------CCGT-------CACTCGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TAG--------TAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------ACGG--------------------------------------TTTTTGTTTTGAGT.............................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTTTTGAGTCAAGC........................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATTTAAACTAAGATCAACGCCGA......................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TT--------------------------------------ATAAAAAATCTACTTTT----------------------------------------------ATAC-------CCGT-------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TACTTTT----------------------------------------------ATAC-------CCGT-------CACTCGTAGA-A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTTGAGTCAAGCAAATGATCT...............................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................GAAG---------------------------------------------------------------------CGT--------------TTCCGACT-------ATAC...........................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................TTTT----------------------------------------------ATAC-------CCGT-------CACTCGTAGA-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................GAAGAAGGAAG---------------------------------------------------------------------CGT--------------TTCCGACT-------...............................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TGTAACAGGAAGAAGGAAG---------------------------------------------------------------------CGT--------------TT............................................................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................AACAGGAAGAAGGAAG---------------------------------------------------------------------CGT--------------TTC...........................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAACTAAGATCAACGCC........................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................GTAACAGGAAGAAGGAAG---------------------------------------------------------------------CGT--------------TTCCGAC.......................................................................................................................................................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................TTCGT--TGAAAAATATGTAACAGGATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TATGTAACAGGAAGAAGGAAG---------------------------------------------------------------------CGT--------------TT............................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTAAACTAAGATCAACGCC........................................................................................2220.5010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TATGTAACAGGAAGAAGGAAG---------------------------------------------------------------------CGT--------------T.............................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................AGATTCGT--TGAAAAATATGTAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.4330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................CTAGATTCGT--TGAAAAATATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.4330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................TAAAAGGGTATTCTAGATTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..................................................................................................................................................................................ATGTAACAGGAAGAAGGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................................................TATGTAACAGGAAGAAGGAAG---------------------------------------------------------------------C..............................................................................................................................................................................................................................................................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...................................................................................................................................................................................TGTAACAGGAAGAAGGAAG---------------------------------------------------------------------C..............................................................................................................................................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................TAGATTCGT--TGAAAAATATGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000
....................................................................................................................................................................TCGT--TGAAAAATATGTAACAGGAAGAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................CGT--TGAAAAATATGTAACAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TAAAAGGGTATTCTAGATTCGT--................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................TAGATTCGT--TGAAAAATATGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................AAAAGGGTATTCTAGATTCGT--................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................AAAAGGGTATTCTAGATTCGT--T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2260.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAAACTAAGATCAACGC.........................................................................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................GATTCGT--TGAAAAATATGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................AAGGGTATTCTAGATTCGT--TG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................AAGGGTATTCTAGATTCGT--................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................................................AGGAAGAAGGAAG---------------------------------------------------------------------CGT--------------TTCCGT........................................................................................................................................................................................................................................................................................................................................................................................2290.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................................................................................................GAAGGAAG---------------------------------------------------------------------CGT--------------TTCCGACT-------AT.............................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................TAGATTCGT--TGAAAAATATGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................ACAGGAAGAAGGAAG---------------------------------------------------------------------CGT--------------TTT...........................................................................................................................................................................................................................................................................................................................................................................................21130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TATTCTAGATTCGT--TGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................GAAGGAAG---------------------------------------------------------------------CGT--------------TTCCGAC.......................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TCAGCA--GG-------------------------------------------TAATTTTTGTACATCCCT---------------------------------------------------------------TATTTGTAGAAAATAAGAGGTAAACCATACCCGCGTAGAAGAATATGTAACAGGCAGAACGAAAAGGAACTACGTGCAATTACTATTTCTCCAATTTTTAGTTTGTTACTTACATCATG---TG---TATGTATGTGTGTATGTTTGTATA-----------ACAAAAGAA-----ATAAAT-------------AACGTTTTGAAAGTAACTTGCGCCTCGTAGGAGTTACTAGAATCTTCACGAATAACTTAAACTTTCTAATAACTTAGTTTCCGTGGTTTTTGACGTTCATACGGACGGATCGACTATGTTAGTGATCAGGTTTTG---------------------AAAAACTTCCT-TAAGCTGTTATCTAAAAAAGCGTGTTGAAC-----------------------------------------------------------------------------------------------------------------------CTTATAAAAGTTA----TAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
TTTATA--TGG--------------------------------------TCGGAAACGCTTCCTTCTGCCTGTTACATAC-------TTTTCAACGAATCAAGTATACCCTTTTACTC--TACGAGTAACGGG---------------------TATAAA-----------------------------------------------------------------------------------TATT------TAATATA------------------------------CATTTCGAACAATAA-----ATTAATAA--------TTTATGAAA-TTA-AAAA------C-----------------------------------------------------------------------------------------------------------------AAGAGAGAACGCTATAGTCGA------------------------------------------------------------------------------------------------------------GTTCCCCGACTATCT--------------------------------------------GATACCA----GTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................CTTCCTTCTGCCTGTTACATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21201.0020020000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTCGA------------------------------------------------------------------------------------------------------------GTTCCCCGACTATCT--------------------------------------------GA............25200.20404000000000
...............................................................................................................................................................................................................................................................ATATA------------------------------CATTTCGAACAATAA-----ATTAATA.............................................................................................................................................................................................................................................................................................................................................................27200.05101000000000
...............................................................................................................................................................................................................................................................ATATA------------------------------CATTTCGAACAATAA-----ATT.................................................................................................................................................................................................................................................................................................................................................................23200.05101000000000
.....................................................................................................................................................................................................................................................................................................................................................AAA------C-----------------------------------------------------------------------------------------------------------------AAGAGAGAACGCTATAGTCGA------------------------------------------------------------------------------------------------------------GT.......................................................................27200.05100000010000
...............................................................................................................................................................................................................................................................ATATA------------------------------CATTTCGAACAATAA-----ATTAA...............................................................................................................................................................................................................................................................................................................................................................25200.05101000000000
................................................................................................AATCAAGTATACCCTTTTACTC--..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000000000
................................................................................................................................................................................................................................................................TATA------------------------------CATTTCGAACAATAA-----ATT.................................................................................................................................................................................................................................................................................................................................................................22200.05101000000000
................................................................................................................................................................................................................................................................TATA------------------------------CATTTCGAACAATAA-----ATTAA...............................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
..................................................................................................................................................................................................................................................................TA------------------------------CATTTCGAACAATAA-----ATTAATAA--------TT..................................................................................................................................................................................................................................................................................................................................................27200.05101000000000
droEug1
TTTATA--GGG--------------------------------------TCGGAAACGGTTCCTTCTACCTCTTACATCA-------TTTTCAACGAATCTAATATACCCCTATACTC--TATGGATAACGGG---------------------TATAAA-----------------------------------------------------------------------------------AACC------ACGTAAGTAACGCGTATAG------------------------------TAA-----GATTGTAAGTAACGGGTTTA----------ATAAGCATGAAGCTCATACAGA------------------------------------------------------------------------CAGACGGACA-----------TAGCT--TA---------------------ACAGACTTCGCTTTTAATACTGATCAAGAA--CATGT-ACAC-----------------------------------------------------------------------------------------------------------------------TTTA---------------TSizeHit CountTotal NormTotal
No Reads
droBia1
TTTATG--GGG--------------------------------------TCGGAAACGCTTCCTTCTACCTTTTACATAC-------TTTCCGAGGAATCTAGTCTACCCTTTTACTC--TACGAGTAACAAGT-------A---AATAAAAAACAATTTACTGGTTC--AAAATAT--------------------------------------------------------------------------------------------------------------------------ATAAAA-----ATAAATGG--------CATCA-----AAAG-------------------------------------------------------------------------------------------------------------------------------------------------AATA--------------------------------------TTTTTA---------------------------------------------------------------------TTATTG--------------------------------------------GTAAGCA----AAASizeHit CountTotal NormTotal
No Reads
droTak1
TTTATA--GGG--------------------------------------TCGGAAATGCTTCCTTCTAGCTGTTACATAC-------TTTTGCACGAATAAAATATACCCTTTTACTC--TACGAGTAACGGGT-------ATA-ATAAAAATACAATTTTGT---------------------------ATAGAAGG---------------------------------------------------------------------CGA--------------C-------TCAGGCCTTACAAATAT----TATTT--------TTTATTTAT-TGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAASizeHit CountTotal NormTotal
No Reads
droEle1
TTAAAT--A---------------------------------------------------------------------------------------------------------------------------------------GAGTAAAGGGTAAATTGTATTCTT--TAAAAATTAAATAACAGATAGAATAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTTATA--GGG--------------------------------------TCGGAAACGCTTCCTTCTAGCTGTTACATAC-------TTTTGCACGAATACAATATACCCTTTTACTC--TACGAGTAACGGG---------------------TATAAT-----------------------------------------------------------------------------------TATTATCATAATATAAATTAAATTTATAT----------------AAATATTTGTAT-----------------ATTAACTATTTTAATAAT-T---------TAGAA-----------------------------------------------------------------------------------------------------------------AAAAGAAAAAGCCAAAGGGGA-----------------------------------------------------------------------------------------------A--ACAAAATAGATTTGCGCG-CTTTCTTTCCAAAAAATCTTCAAATCAAATTTAAAAGGCACAAAATCATTAAACCTA----ATTSizeHit CountTotal NormTotal
No Reads
droFic1
TCTATT--CTG--------------------------------------CTCGTGATGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
ATATAA--A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAAAA-----ATAAATAT--------TTTAAAATT-TAAAATGGGCAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBip1
TTTGTT--TAT--------------------------------------TTTGA-TTATTGCTTTCTAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATCAAG----GAGTTTTACTTTCCG---------------------------------------------------------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
dp5
TCGACT--CGG--------------------------------------CTATTGATGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TCGACT--CGGCTATTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGATTCCTTCTGGACGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAATACTCATTTTGAGTATCGGG---------------------TATAAA-----------------------------------------------------------------------------------AATAAACAAA----GAGTTACAAGTTTTG--------------------------------------------------------------------------------------------------------ATAGA-------------------------------------------------------------TA-----------CGGG--------------------------AGCAACTTC-------CTGTTATATAAAAA--AG----GGAA-----------------------------------------------------------------------------------------------------------------------TTTACGAAA-ATA----AAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................CTAATATACCCCAATACTCATTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
..................................ATATACTTTATAGGGTCGGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000100
droWil2
TTCCTT--T-----------------------------------------------------------------------------------------------------------------------------TACACCCATGCAAAAAAGGGTATATTACTTTAGG--TCAAAAGTATGCAACGCATAGAAGAAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
TCGACGCGGGG--------------------------------------TCGGAGATACTTCCTTCTGCCGATGAT------------------------TAATATG-----------------------------CTTGAATGCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATGGTAGGGATCCGTACG-CATAC--------------------------------------A-------AAAAGATTTAACASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................TTCCTTCTGCCGATGAT------------------------TAATATG-----------------------------C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................CCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATGGTAGGGATCC......................................................................20200.204000000000000000000000004000000000000000000000000000000000000000
..............................................................................................................................................TGCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATGGTAGGGATC.......................................................................21200.153000000000000000000000000300000000000000000000000000000000000000
................................................................................................................................................CCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATGGTAGGGATCCGTACG-CA..............................................................27200.102000000200000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TGAATGCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATGGTAGGGATCCGT....................................................................28200.102000000000000000000000000020000000000000000000000000000000000000
................................................................................................................................................CCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATGGTAGGGATC.......................................................................19200.051000000000000000000000000000000100000000000000000000000000000000
..............................................................................................................................................TGCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATGGTAGGG..........................................................................18200.051000000001000000000000000000000000000000000000000000000000000000
................................................................................................................................................CCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATGGTAGGGATCCGT....................................................................22200.051000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................CCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATGGTAGGGATCCGTAC..................................................................24200.051000001000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TGAATGCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATGGTAGGG..........................................................................22200.051000000001000000000000000000000000000000000000000000000000000000
droMoj3
TGCACA--AAA--------------------------------------CCAA--------------------------------------------------TATACTGATTCACTT--T--CGTGAATGAG---------------------TATAAA-----------------------------------------------------------------------------------AATA------------------------------------------------------------------GAAAG--------CATAACATT-CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATG-TAAAA--------------------------------------A-------AAAAAA----CAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................TATACTGATTCACTT--T--CGTGAATGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25202.95595900000
..........................................................................................................................................................TATAAA-----------------------------------------------------------------------------------AATA------------------------------------------------------------------GAAAG--------CATAACATT-CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT....................................................................2890.111000010
...............................................................................................................TTCACTT--T--CGTGAATGAG---------------------TAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
.........AA--------------------------------------CCAA--------------------------------------------------TATACTGATTCACTT--..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
.......................................................................................................TATACTGATTCACTT--T--CGTGAATGAG---------------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000001
droGri2
TTTATG--TGG--------------------------------------TCGGAGATGCTTCCTTCTACCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 10:11 AM