ID:dsi_12654 |
Coordinate:3r:10058634-10058675 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -9.8 | -9.8 | -9.8 |
 |
 |
 |
exon [3r_10058514_10058924_+]; CDS [3r_10058514_10058924_+]
No Repeatable elements found
| ############################################################################################################################################## TGCTCGTCCTGGCGGAAGCCAGGATAGAGGGGCGCAGCCTGTTCGCCGGCGTGCCATCGATGGGCGAGAACAAGCCCAAGAACTTCATGCAGCTGGCGGGCCGCATCCTGCTGGCCTTCATGTTTATCACTTTGATCCGCTT **************************************************......((..(((((........))))).))...........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M024 male body |
SRR902008 ovaries |
M025 embryo |
M053 female body |
SRR618934 dsim w501 ovaries |
M023 head |
O002 Head |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................GATGGGCGAGAACAAGCC.................................................................. | 18 | 0 | 1 | 2.00 | 2 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ........................TAGAGGGGCGCAGCCTGTTCGCCGG............................................................................................. | 25 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ....................AGGATAGAGGGGCGCAGCCTGTTCGCC............................................................................................... | 27 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........TGGCGGAAGCCAGGATAGAGGGACG............................................................................................................ | 25 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ............................................................................CAAGAACTTCATGCAGCTGGC............................................. | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........CTGGCGGAAGCCAGGATAGAGGGGCGC........................................................................................................... | 27 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................ATAGAGGGGCGCAGCCTGTTCGCC............................................................................................... | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ............................................GCCGGCGTGCCATCGATGGGC............................................................................. | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................GGCGTGCCATCGATGGGC............................................................................. | 18 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................................................TCCTGCTGGCCTTCATGT................... | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .........TGGCGGAAGCCAGGATAGAGGGACGCAG......................................................................................................... | 28 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................GGCGTGCCATCGATGGGCGAGAACAAGC................................................................... | 28 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........TGGCGGAAGCCAGGATAGAGGGACGC........................................................................................................... | 26 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................CAGGATAGAGGGGCGCAGCCTGTT................................................................................................... | 24 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ......................................................................................................................CATGTTTATCACTTTGATCC.... | 20 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................................CCAAGAACTTTATGCAGCTGG.............................................. | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| ...........................................................................CCAAGTACTTCATGCAGCTGGC............................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .....................................CCTGTTCGCCGGCCTGCCC...................................................................................... | 19 | 2 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
|
ACGAGCAGGACCGCCTTCGGTCCTATCTCCCCGCGTCGGACAAGCGGCCGCACGGTAGCTACCCGCTCTTGTTCGGGTTCTTGAAGTACGTCGACCGCCCGGCGTAGGACGACCGGAAGTACAAATAGTGAAACTAGGCGAA
**************************************************......((..(((((........))))).))...........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
M023 head |
SRR553488 RT_0-2 hours eggs |
SRR553485 Chicharo_3 day-old ovaries |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| ..............................CCGCGTCGTACAAGCG................................................................................................ | 16 | 1 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 |
| .....................................................................TGTTAGGATTCTGGAAGTA...................................................... | 19 | 3 | 20 | 0.20 | 4 | 0 | 0 | 0 | 3 | 1 |
| ................................................................................................................CCGGAAGTACAAAAACTG............ | 18 | 2 | 12 | 0.17 | 2 | 0 | 2 | 0 | 0 | 0 |
| .........ACCGCCTTGGGTCCTAGCTT................................................................................................................. | 20 | 3 | 6 | 0.17 | 1 | 0 | 0 | 1 | 0 | 0 |
Generated: 04/24/2015 at 10:22 AM