ID:

dsi_12622

 Coordinate:

3r:26842464-26842613 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.4 -14.3 -14.2 -13.9

Flybase annnotation

CDS [3r_26841641_26842463_+]; exon [3r_26841611_26842463_+]; intron [3r_26842464_26842953_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CATCGGAACCGTACCAGTAGGTCGTGTGGAGACTGGTCTCCTCAAGCCAGGTAAGGCAGAACTTCCTTGTCTTCCGGGTTGATAAGTGCGGGTGTGGGCTCTCCCTTCTCTTTGGGCACTTCATACATGTATTCTGCAGAATTTGGGTCGACAGTGGGCTGCCATCCAACGCCCACCGCCTCCAAAGCGGAGCTCGCGACGAAGTCTTGCGCATGTATGCATTATTGAGCGAACGTCTTCGTCGAGAGCG
**************************************************************************************.((.......(((((....((((......(((.........))).......))))...)))))........))******************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 SRR902009
testis
......................................................................................TGCGGGTGTGGGCTCTCCCTTC.............................................................................................................................................. 22 0 1 2.00 2 2 0 0 0 0 0 0
...........................................................................................................................................................................................CGGAGCTCGCGACGAAGTC............................................ 19 0 1 2.00 2 0 0 2 0 0 0 0
..........................................................................................................................................................................................................................GCATTATTGAGCGAACGTCT............ 20 0 1 1.00 1 0 0 1 0 0 0 0
................................................................................GATAAGTGCGGGTGTGGGCTC..................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
.....................................................................TCTTCCGGGTTGATAAGTGCG................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0
......................................................................................TGCGGGTGTGGGCTCTCCCTTCTC............................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0
........................................................CAGAACTTCCATGTCTTCCGGGTTGA........................................................................................................................................................................ 26 1 1 1.00 1 0 1 0 0 0 0 0
.........................................................................................................................TATACATGTATTCTGCAGAATTTGGG....................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................TATGCATTATTGAGCGAACGT.............. 21 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................TATTGAGCGAACGTCTTCGTCGAGAGC. 27 0 1 1.00 1 0 0 0 0 0 1 0
.....................................................................TGTTCCGGGTTGATAAGGG.................................................................................................................................................................. 19 2 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................CATACATGTATTCTGCTGAATTTGGGT...................................................................................................... 27 1 1 1.00 1 0 0 0 0 1 0 0
......................................................................................................................................TGCAGAATTTGGGTCGACAGTGGGC........................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0
..............CAGTAGGTCGTGTGGAGACTG....................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0
......................................................................................TGCGGGTGTGGGCTCTCCCTTCTCTTTG........................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................................AGAATTTGGGTCGACAGTGGGCTGC........................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0
......................CGTGTGGAGACTGGT..................................................................................................................................................................................................................... 15 0 2 0.50 1 1 0 0 0 0 0 0
................GTGGGTCGTGTGGAGACTGGT..................................................................................................................................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0
.........................GTGGAGACTGGTGTTCTCA.............................................................................................................................................................................................................. 19 2 3 0.33 1 0 1 0 0 0 0 0
..................GGGTCGTGTGGAGACT........................................................................................................................................................................................................................ 16 1 3 0.33 1 0 1 0 0 0 0 0
............................................................................................................................................................................................................GCTTGCGCATGAATGGATTA.......................... 20 3 4 0.25 1 1 0 0 0 0 0 0
..........................................................................................GATGTCGGCTCTCCCTTCA............................................................................................................................................. 19 3 13 0.15 2 0 0 0 0 0 0 2
................................................................................................................................................................................CGCCTCCAAAGCGGA........................................................... 15 0 8 0.13 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................GACGAAGTCTTCCGCATT................................... 18 2 11 0.09 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................GCGCATGAATGGATTATT........................ 18 2 15 0.07 1 1 0 0 0 0 0 0
.......................................................................TCCCCGGTTGATAAGGGC................................................................................................................................................................. 18 3 20 0.05 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................CCTGCGCATGAATGGATTA.......................... 19 3 20 0.05 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................CGAACGTCTTTGTAGACA... 18 3 20 0.05 1 1 0 0 0 0 0 0
..............CAGTAGGTCGTGAGT............................................................................................................................................................................................................................. 15 2 20 0.05 1 0 0 0 0 1 0 0
.............................................................................................GTCGGCTCTCCCTTCA............................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 1 0 0

Anti-sense strand reads

GTAGCCTTGGCATGGTCATCCAGCACACCTCTGACCAGAGGAGTTCGGTCCATTCCGTCTTGAAGGAACAGAAGGCCCAACTATTCACGCCCACACCCGAGAGGGAAGAGAAACCCGTGAAGTATGTACATAAGACGTCTTAAACCCAGCTGTCACCCGACGGTAGGTTGCGGGTGGCGGAGGTTTCGCCTCGAGCGCTGCTTCAGAACGCGTACATACGTAATAACTCGCTTGCAGAAGCAGCTCTCGC
*******************************************************************************************.((.......(((((....((((......(((.........))).......))))...)))))........))************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
............................................................................................................................................................................................CCCCGAGCGCGGCTGCAGA........................................... 19 3 6 1.50 9 8 0 0 0 0 0 1 0
........................ACACCTCTGACCAGAGGAGT.............................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0
.......................................................................................................................................CGTCTTAAACCCAGCTGTCAC.............................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0
....................................................................CAGAGGGCCCAGCTATTC.................................................................................................................................................................... 18 2 1 1.00 1 0 0 0 1 0 0 0 0
...................................................................................................................................................................TAGGTTGCGGGTGCC........................................................................ 15 1 9 0.44 4 0 0 2 1 0 0 0 1
.......................................................................AAGGCCCCACTATTC.................................................................................................................................................................... 15 1 8 0.38 3 0 0 2 0 0 1 0 0
...................................................................................................................................................................TAGGTTGCGGGTGCCGT...................................................................... 17 2 20 0.35 7 0 0 7 0 0 0 0 0
............................................................................................................................................................................................CCCCGAGCGCGGCTTCAG............................................ 18 2 3 0.33 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................GTAGGTTGCGGGTGCC........................................................................ 16 1 4 0.25 1 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................GGCCCGAGCGCTGCTGCAGA........................................... 20 3 5 0.20 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................CGAGCGCGGCTGCAGA........................................... 16 2 20 0.15 3 0 0 1 0 0 2 0 0
................................................................................................................................................................................GCGGAGGTTTCGCCT........................................................... 15 0 8 0.13 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................GGCGGAGGTTTCGCCT........................................................... 16 0 8 0.13 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................................GGTTGCTGGTGGCGGA..................................................................... 16 1 9 0.11 1 0 0 0 1 0 0 0 0
.................................................................................................................................................................AGTAGGTTGCGGGTGCCG....................................................................... 18 2 9 0.11 1 0 0 1 0 0 0 0 0
...............................................................................................................................................................ACGGTAGTTTGCGGGTGC......................................................................... 18 2 10 0.10 1 0 1 0 0 0 0 0 0
......................................................................TAAGGCCCCACTATTC.................................................................................................................................................................... 16 2 20 0.10 2 0 0 2 0 0 0 0 0
.....................................................................ACAAGGCCCAACCATTCAG.................................................................................................................................................................. 19 3 10 0.10 1 0 1 0 0 0 0 0 0
...................................................................................................AGAGGGAAGAGAGAC........................................................................................................................................ 15 1 20 0.10 2 0 0 2 0 0 0 0 0
...............................................................................................................................................................................................TGAGCGCTGCTTCAGAGAG........................................ 19 3 12 0.08 1 0 0 0 0 0 0 1 0
......................................................................GAGGGCCCAGCTATTC.................................................................................................................................................................... 16 2 14 0.07 1 0 0 0 1 0 0 0 0
..........................................................CTTGAAGGAATAGAAG................................................................................................................................................................................ 16 1 16 0.06 1 0 1 0 0 0 0 0 0
.................................................................................................................................................CCAGCTGTCACGCGAA......................................................................................... 16 2 20 0.05 1 0 0 0 0 0 1 0 0
.......................................GGAGTTCGGGCCATA.................................................................................................................................................................................................... 15 2 20 0.05 1 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:26842414-26842663 + dsi_12622 CATCGGAACCGTACCAGTAGGTCGTGTGGAGACTGGTCTCCTCAAGCCAGGTAAGGCAG----------------------------------AA------CTTCCTTGTC-TTCCGGGTTGAT--AAGT-G-CGGGTGTGG---------------------------------------------------------------GCTCTCCCTTCT---------------------CTTTGGGCA--CTTCATACATGTATT------CT-------------------GCAGAATTTGGGTCGACAGTGGG----C------------------------------TGCCA-TCCAACGC------------------CCACCGCCT------------CCAAAGCGGAGCT--CGCG-ACGAAGTCTTGCGCATGTATGCATTATTGAGCGAACGTCTTCGT--CGAGAGCG
droSec2 scaffold_31:221397-221646 + CATCGGAACCGTACCAGTAGGTCGTGTGGAGACTGGTCTCCTCAAGCCAGGTAAGGCAG----------------------------------AA------CTTCCTTGTC-TTCCGGGTTGAT--AAGT-G-CGGGTGTGG---------------------------------------------------------------GCTCTCCCTTCT---------------------CTTTGGGCA--CTTCATACATGTATT------CT-------------------GCAGAATTTGGGTCGACAGTGGG----C------------------------------TGCCA-TCCAACGC------------------CCACCGCCT------------CCAAAGCGGAGCT--CGCG-ACGAAGTCTTGCGCATGTATGCATTATTGAGCGAACGTCTTCGT--CGAGAGCG
dm3 chr3R:27566842-27567076 + CATCGGAACCGTACCAGTAGGTCGTGTGGAGACTGGTCTCCTCAAGCCAGGTAAGGCT--------------------------------------------------------CCGGGTTGAT--GAGG-T-CGGGTGTGG---------------------------------------------------------------GCCCTCTTTTCT---------------------CTTTGGGCA--CTTCATACATGTATT------CT-------------------GCAAAATTTGGGTCGACAGTGGG----C------------------------------TGGCA-TCCAACAG------------------CCACCGCCT------------CCAAAGCGGAGCC--CGCA-ACGAAGTCTTGCGCATGTATGCATTATTGAGCGAACGTCTTCGT--CGAGAGCG
droEre2 scaffold_4820:408826-409075 - CATCGGAACCGTACCAGTTGGTCGTGTGGAGACTGGTCTCCTCAAGCCAGGTAAAGCTA----------------------------------AA------CTTTCTTGTC-TTCCGGGTTGAT--GATT-G-GGGGTGTAG---------------------------------------------------------------GCTCTCTTTTCG---------------------CTTTGGGTA--TTTCATACATGTATT------CT-------------------GTGCAATTTGGGTCGACAGTGGG----C------------------------------AGCCACTCCAACTC------------------TCACCGCCC-------------CAAAGCGGAGCT--CGCG-ACGAAGTCTTGCGCATGTATGCATTATTGAGCGAACGTCTTCGT--CGAGAGCT
droYak3 3R:28501412-28501661 + CATCGGAACCGTACCAGTGGGTCGTGTGGAGACTGGTCTCCTCAAGCCAGGTAAAGCTC----------------------------------AA------CTTCCTTGTC-TTTCGGGTTGAT--AATG-G-GGGGTGTAG---------------------------------------------------------------GCACTCCTTTCT---------------------CTTCGGGTA--TTTCACACATGTATT------CT-------------------GTGGAATTTGGGTCGACAGTGGG----C------------------------------TGCGACTCCAACTC------------------CCACCGCCT------------CCA-AGCGAAGCT--CGCG-ACGAAGTCTTGCGCATGTATGCATTATTGAGCGAACGTCTTCGT--CGAGAGCG
droEug1 scf7180000409488:338090-338333 - CATCGGTACAGTACCAGTGGGTCGTGTGGAGACTGGTCTCCTCAAGCCAGGTAAAGTAT----------------------------------AA------CTG-----------CATGTTGAT-----TGG-AG-A----GCCTTTCA--------------------------------------------------------ACTCCA----CC---------------------CTCTGATTA--TTTCATTCATGTGCT------GT-------------------AAGAAATTTGGGTCGGCAGTGGG----T------------------------------TGCCACTCCCAATCCCTTTC------------TCGCCACCT------------TTGCAACGGCGCT--CGCAGACGAAGTTTTGCGCATGTATGCATTATTGAGTAAACTTCTCTGC--CGAGAGCG
droBia1 scf7180000302035:230745-231016 + CATCGGCACCGTACCAGTGGGCCGAGTGGAGACTGGTCTCCTCAAGCCAGGTAAAGCCG----------------------------------TA------GTTCCTTGTC-TTCCGGGCTGAGTCCCAT-G-GGGGTGCAGTCTCTCT--------------------------------------------------------GCTCTGCCTTCC---------------------CCCTGATTG--TTTCATTCATGTGCT------CTGGCA-----------CTCAGCGGAATTTGGGTCGGCAGTGGG----C------------------------------TGCCACTCCCACTCCC-------------TTGCCACCGCCT------------ACGAGTCTGAGCT--CGCG-ACGAAGTCTTGCGCATGTATGCATTATTGAGCGAACGCC-TCGT--CGAGAGCG
droTak1 scf7180000415712:653041-653311 + CATCGGCACGGTACCCGTGGGTCGCGTGGAGACCGGTCTCCTCAAGCCAGGTAAACCTG----------------------------------TA------CTTCCCTGTT-TTCCGG----------------------------------------------------------------------------------------CCCTACCCTCC------------------CTCGCTTGATTA--TTTCATTCATGTACTGGTAGTCTGGTACTCCGGTACTCTGAATCGGAATTTGGGTCGCCAGTGGG----C------------------------------TGCCACTCCCACTCCCCCTC-C-----ATTTTCCATTGCCTTCGAATGAGAATCCAAATCTCAGCT--CGCG-ACGAAGTCTTGCGCATGTATGCATTATTGAGAG-------------CGAGGGAG
droEle1 scf7180000491194:1611444-1611695 + CATCGGCACCGTACCAGTGGGTCGCGTGGAGACCGGTCTCCTTAAGCCAGGTAAATCTGCTT-T------TGCCGTTCTCC---TTCT-GATTGGTGT---TCCCCTTGTC-T--------------------GAAGTGAAGA-----------------------CTTG-----------------------------------GTTTCCTGCCCT---------------------CTCTGATTA--TTTCATTCATGTACT------CT-------------------GTGGAATTTGGGTCGGCAGTGGG----C------------------------------GGCCACTCCCACTG------------------CCACCG-------------------------ACT--CGCC-ACGAAGTCTTGCGCATGTATGCATTATTGAGCGA-CTTCGCAGT--CGCGAGCG
droRho1 scf7180000779322:129199-129458 - CATCGGCACCGTACCAGTGGGTCGCGTGGAGACTGGTCTCCTTAAGCCAGGTAAATCTGCTG-T------TGCAGTACCCC---GTCTTGATTGG------TTCCCTTGTC-TTCCGGGTTAAG--TGGT-G-GAAGTAAGG---------------------------------------------------------------TCCTCCCACCCT---------------------CTCTGATTA--TTTCATTCATGTTCT------CT-------------------GCGAAATTTGGGTCGGCAGTGGG----C------------------------------TGCAACTCCCACTG------------------CCACCACCT------------------CGGAG-----------ATAGTCTTGCGCATGTATGCATTATTGAGAGAAT-TCTCCGT--CAAGAGCG
droFic1 scf7180000454114:253174-253460 + CATCGGCACCGTACCAGTGGGTCGTGTGGAGACTGGTCTCCTCAAGCCAGGTAAATACGCTG-T------TGCAGTGCACC---GTCTTGACAGGTGCCCTCTTCCTCCTC-TTCCGGGT---------------------------------------------------------GCTCATGAGTGCTGGGCGAAATTTCCAGTCACCC---------------------------CTCAGCT---------------TTCT------CT-------------------GCGGAATTTGGGTCGCCAGTGGG----C------------------------------TGACACTTCCACTTCCACTC-CGCTCCCCTTGCCACCGCCC------------CCA-AACGGAGCT--CGCG-ACGAAGTCTTGCGCATGTATGCATTATTGAGCGA-CTTCTTCGT--CGAGAGCA
droKik1 scf7180000302810:829092-829363 + AATCGGAACCGTACCCGTTGGCCGCGTGGAGACGGGCATCCTTAAGCCAGGTAAGCTGGG-CT--GCTACTC-------CC---GTCTTATTTAG------CTGCATTGTTTTTCCGGGTCGAG-----TGG-GAGGTGTTT-----CC------TCTCTCTGTCTTTCT-----------------------------------GTCTACCA--CC---------------------CTTTGATTATGTTTCATTCATGTACT------CC-------------------TTGGAATTTGGGTCGGCTGTGGGAGGGG------------------------------TGCCACTCCC--------------------------------------------------TCGGCT--TGCC-ACGATGCCCTGCGCATGTATGCATTATTGAGCGAGTGTCTCTGC--CGAGAGCA
droAna3 scaffold_12911:3523626-3523878 - TATTGGAACGGTACCCGTTGGCCGAGTGGAGACTGGCATCCTGAAGCCAGGTAAGTCAGGCC-AGGCT-------------------------------------ATTTTC-TTTCGTGTGGGT-----T-G-GGGGTGC---------------------------------------------------------------------T------C---------------------CTTCGATTA--TTTCATTCATGTATC------CC-------------------TTTGAATTTGGGTCGCCGGTGGG----TGACAGTCAGTGGTGAGTGGTGAGTGGG---TG---------------------------------TCGTCT------------CCA-ACCGAGGCTCGCTCG-ACGAGTCCTTGCGCATGTATGCATTATTAAACGAACGTCTCCGACACGAGAGCG
droBip1 scf7180000396640:387034-387303 - CATCGGAACCGTACCCGTCGGCCGAGTGGAGACTGGCATCCTAAAACCAGGTAAGTG--------GCT-------------------------------------ATTTTC-T--------------------GTAATTAGTT-----------------------TTTA-----------------------------------GCCTTCCACCCTTTTTTTTGTGGGGCTGTGCTCCTTCGATTA--CTTCATTCATGTACC------TC-------------------ATCGAATTTGGGTCGCTGGTGGG----TGCCAG--------------AGAGTGGGTGTTGCCACCGCCGAT---------------------GTCGTCT------------CCG-ACCGAGGCT--CGCG-ACGAGTCCTTGCGCATGTATGCATTATTAAACGAACGTCTCCGACGCGAGAGCG
dp5 2:16537007-16537274 - CATTGGCACCGTGCCCGTTGGTCGTGTGGAGACCGGCATCCTGAAGCCAGGTAAGGATTGGAT-------GGAATCACAATGCAATCTTGATT-------------------------------------TAA-T-A----TCCCCCCCACACACACACA----------CTGCCCTG--------------------------------------C---------------------CCATGATTAGTGTTCATTCAAGTTTT------CTGC--ATCGAGAGCTGCCCATCTAAATTTGGGTCGGCATTTGG----G------------------------------TGCCGCTGCCGCTGCC---------------GCCACCG----------------T-GACCGAAGCT--CGAC-ACGAAGCCCTGCGCATGTATGCATTATTGAGC----------GT--CGAGAGCG
droPer2 scaffold_0:3859827-3860107 + TATTGGCACAGTGCCCGTTGGTCGTGTGGAGACCGGCATCCTGAAGCCAGGTAAGGATTGGAT-------GGAATCACAATGTAATCTTGATT-------------------------------------TAA-T-A----CCCCCCCCACAC--ACTCA----------CTGCCCTG--------------------------------------C---------------------CCATGATTAGTGTTCATTCAAGTTTT------CTGC--CTCCAGAGCTGCCCATCTAAATTTGGGTCGGCGTTTGG----G------------------------------TGCCGCCGCCGACGCCGCCGCTGCCGCTGCCGCCACCG----------------T-GACCGAAGCT--CGAC-ACGAAGCCCTGCGCATGTATGCATTATTGAGC----------GT--CGAGAGCG
droWil2 scf2_1100000004558:2713285-2713335 - TATCGGAACAGTACCCGTCGGTCGTGTGGAGACTGGTGTCCTGAAGCCTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13047:9381964-9382028 - CATCGGCACAGTGCCAGTCGGTCGTGTGGAAACGGGTATTCTCAAGCCAGGTATGTTAG----------------------------------CA------CTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:11960823-11960877 - CATAGGCACAGTACCAGTTGGTCGTGTAGAGACTGGAGTACTCAAGCCAGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14906:2301101-2301155 - CATCGGCACAGTGCCAGTCGGTCGCGTCGAAACGGGTATTCTCAAGCCAGGTAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CATCGGAACCGTACCAGTAGGTCGTGTGGAGACTGGTCTCCTCAAGCCAGGTAAGGCAG----------------------------------AA------CTTCCTTGTC-TTCCGGGTTGAT--AAGT-G-CGGGTGTGG---------------------------------------------------------------GCTCTCCCTTCT---------------------CTTTGGGCA--CTTCATACATGTATT------CT-------------------GCAGAATTTGGGTCGACAGTGGG----C------------------------------TGCCA-TCCAACGC------------------CCACCGCCT------------CCAAAGCGGAGCT--CGCG-ACGAAGTCTTGCGCATGTATGCATTATTGAGCGAACGTCTTCGT--CGAGAGCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................T-G-CGGGTGTGG---------------------------------------------------------------GCTCTCCCTTC....................................................................................................................................................................................................................................................................2212.00200000000002000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGCT--CGCG-ACGAAGTC..............................................1912.00220000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTATTGAGCGAACGTCT..............2011.00110000000000000000
.........................................................................................................................GAT--AAGT-G-CGGGTGTGG---------------------------------------------------------------GCTC...........................................................................................................................................................................................................................................................................2111.00100000000100000000
.............................................................................................................TC-TTCCGGGTTGAT--AAGT-G-CG.....................................................................................................................................................................................................................................................................................................................................................2111.00100000000100000000
.................................................................................................................................T-G-CGGGTGTGG---------------------------------------------------------------GCTCTCCCTTCT---------------------C.............................................................................................................................................................................................................................................2411.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCATTATTGAGCGAACGT................2111.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGAGCGAACGTCTTCGT--CGAGAGC.2711.00100100000000000000
...............................................................................................................................................................................................................................................................................T-------------------GCAGAATTTGGGTCGACAGTGGG----C------------------------------...............................................................................................................................2511.00100000001000000000
..............CAGTAGGTCGTGTGGAGACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
.................................................................................................................................T-G-CGGGTGTGG---------------------------------------------------------------GCTCTCCCTTCT---------------------CTTTG.........................................................................................................................................................................................................................................2811.00100000000001000000
.....................................................................................................................................................................................................................................................................................................AGAATTTGGGTCGACAGTGGG----C------------------------------TGC............................................................................................................................2511.00100000000001000000
......................CGTGTGGAGACTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................CGCCT------------CCAAAGCGGA................................................................1580.13100000000001000000
droSec2
CATCGGAACCGTACCAGTAGGTCGTGTGGAGACTGGTCTCCTCAAGCCAGGTAAGGCAG----------------------------------AA------CTTCCTTGTC-TTCCGGGTTGAT--AAGT-G-CGGGTGTGG---------------------------------------------------------------GCTCTCCCTTCT---------------------CTTTGGGCA--CTTCATACATGTATT------CT-------------------GCAGAATTTGGGTCGACAGTGGG----C------------------------------TGCCA-TCCAACGC------------------CCACCGCCT------------CCAAAGCGGAGCT--CGCG-ACGAAGTCTTGCGCATGTATGCATTATTGAGCGAACGTCTTCGT--CGAGAGCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................GAATTTGGGTCGACAGTGGG----C------------------------------T..............................................................................................................................2211.0011000
............ACCAGTAGGTCGTGTGGAGACTGGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
...................GGTCGTGTGGAGACTGGTCTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
..................AGGTCGTGTGGAGACTGGTCTCCTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
.................TAGGTCGTGTGGAGACTGGTCTCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
dm3
CATCGGAACCGTACCAGTAGGTCGTGTGGAGACTGGTCTCCTCAAGCCAGGTAAGGCT--------------------------------------------------------CCGGGTTGAT--GAGG-T-CGGGTGTGG---------------------------------------------------------------GCCCTCTTTTCT---------------------CTTTGGGCA--CTTCATACATGTATT------CT-------------------GCAAAATTTGGGTCGACAGTGGG----C------------------------------TGGCA-TCCAACAG------------------CCACCGCCT------------CCAAAGCGGAGCC--CGCA-ACGAAGTCTTGCGCATGTATGCATTATTGAGCGAACGTCTTCGT--CGAGAGCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCTTGCGCATGTATGCAT..............................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000
................GTAGGTCGTGTGGAGACTGGTCTCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000
...................GGTCGTGTGGAGACTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................GAGG-T-CGGGTGTGG---------------------------------------------------------------GCCCTCTTTT.....................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AGTAGGTCGTGTGGAGACTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGAGCGAACGTCTTCGT--T.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................GGTCGTGTGGAGACTGGTCTCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......ACCGTACCAGTAGGTCGTGTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AGGCT--------------------------------------------------------CCGGGTTGAT--GAGG-T-.......................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..................................................................................................................CCGGGTTGAT--GAGG-T-CGGGTGTGG---------------------------------------------------------------GCC............................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
............ACCAGTAGGTCGTGTGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................GAT--GAGG-T-CGGGTGTGG---------------------------------------------------------------GCCCT..........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................CCGGGTTGAT--GAGG-T-CGGGTGTGG---------------------------------------------------------------GC.............................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................CCGGGTTGAT--GAGG-T-CGGGTGTGG---------------------------------------------------------------GCATC..........................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGGAACCGTACCAGTAGGTCGTGTGGAGACTGGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................3511.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GTACCAGTAGGTCGTGTGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.................TAGGTCGTGTGGAGACTGGTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TTGGGTCGACAGTGGG----C------------------------------TGGC...........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AGGTCGTGTGGAGACTGGTCTCCTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCGAACGTCTTCGT--CGAGAGC.2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GAACCGTACCAGTAGGTCGTGTGGAGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TAGGTCGTGTGGAGACTGGTCTCCTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..........................................................................................................................................GTGG---------------------------------------------------------------GCCCTCTTTTCT---------------------CTTTG.........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GACTGGTCTCCTCAAGCCAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TTTCT---------------------CTTTGGGCA--CTTCATACATG........................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GTACCAGTAGGTCGTGTGGAGACTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GTAGGTCGTGTGGAGACTGGTCTCCTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................TAGGTCGTGTGGAGACTGGTCTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........TACCAGTAGGTCGTGTGGAGACTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
droEre2
CATCGGAACCGTACCAGTTGGTCGTGTGGAGACTGGTCTCCTCAAGCCAGGTAAAGCTA----------------------------------AA------CTTTCTTGTC-TTCCGGGTTGAT--GATT-G-GGGGTGTAG---------------------------------------------------------------GCTCTCTTTTCG---------------------CTTTGGGTA--TTTCATACATGTATT------CT-------------------GTGCAATTTGGGTCGACAGTGGG----C------------------------------AGCCACTCCAACTC------------------TCACCGCCC-------------CAAAGCGGAGCT--CGCG-ACGAAGTCTTGCGCATGTATGCATTATTGAGCGAACGTCTTCGT--CGAGAGCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........GTACCAGTTGGTCGTGTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000200
.........................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCT--CGCG-ACGAAGTCTTG...........................................2111.0010000010
..................TGGTCGTGTGGAGACTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
...............AGTTGGTCGTGTGGAGACTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...............AGTTGGTCGTGTGGAGACTGGTCTCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
.........CGTACCAGTTGGTCGTGTGGAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
......AACCGTACCAGTTGGTCGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...................GGTCGTGTGGAGACTGGTCTCCTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
droYak3
CATCGGAACCGTACCAGTGGGTCGTGTGGAGACTGGTCTCCTCAAGCCAGGTAAAGCTC----------------------------------AA------CTTCCTTGTC-TTTCGGGTTGAT--AATG-G-GGGGTGTAG---------------------------------------------------------------GCACTCCTTTCT---------------------CTTCGGGTA--TTTCACACATGTATT------CT-------------------GTGGAATTTGGGTCGACAGTGGG----C------------------------------TGCGACTCCAACTC------------------CCACCGCCT------------CCA-AGCGAAGCT--CGCG-ACGAAGTCTTGCGCATGTATGCATTATTGAGCGAACGTCTTCGT--CGAGAGCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................GTGGGTCGTGTGGAGACTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...................GGTCGTGTGGAGACTGGTCTCCTCAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
................GTGGGTCGTGTGGAGACTGGTCTCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
................GTGGGTCGTGTGGAGACTGGTCTCCTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
............ACCAGTGGGTCGTGTGGAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.................TGGGTCGTGTGGAGACTGGTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEug1
CATCGGTACAGTACCAGTGGGTCGTGTGGAGACTGGTCTCCTCAAGCCAGGTAAAGTAT----------------------------------AA------CTG-----------CATGTTGAT-----TGG-AG-A----GCCTTTCA--------------------------------------------------------ACTCCA----CC---------------------CTCTGATTA--TTTCATTCATGTGCT------GT-------------------AAGAAATTTGGGTCGGCAGTGGG----T------------------------------TGCCACTCCCAATCCCTTTC------------TCGCCACCT------------TTGCAACGGCGCT--CGCAGACGAAGTTTTGCGCATGTATGCATTATTGAGTAAACTTCTCTGC--CGAGAGCGSizeHit CountTotal NormTotal
No Reads
droBia1
CATCGGCACCGTACCAGTGGGCCGAGTGGAGACTGGTCTCCTCAAGCCAGGTAAAGCCG----------------------------------TA------GTTCCTTGTC-TTCCGGGCTGAGTCCCAT-G-GGGGTGCAGTCTCTCT--------------------------------------------------------GCTCTGCCTTCC---------------------CCCTGATTG--TTTCATTCATGTGCT------CTGGCA-----------CTCAGCGGAATTTGGGTCGGCAGTGGG----C------------------------------TGCCACTCCCACTCCC-------------TTGCCACCGCCT------------ACGAGTCTGAGCT--CGCG-ACGAAGTCTTGCGCATGTATGCATTATTGAGCGAACGCC-TCGT--CGAGAGCGSizeHit CountTotal NormTotal
No Reads
droTak1
CATCGGCACGGTACCCGTGGGTCGCGTGGAGACCGGTCTCCTCAAGCCAGGTAAACCTG----------------------------------TA------CTTCCCTGTT-TTCCGG----------------------------------------------------------------------------------------CCCTACCCTCC------------------CTCGCTTGATTA--TTTCATTCATGTACTGGTAGTCTGGTACTCCGGTACTCTGAATCGGAATTTGGGTCGCCAGTGGG----C------------------------------TGCCACTCCCACTCCCCCTC-C-----ATTTTCCATTGCCTTCGAATGAGAATCCAAATCTCAGCT--CGCG-ACGAAGTCTTGCGCATGTATGCATTATTGAGAG-------------CGAGGGAGSizeHit CountTotal NormTotal
No Reads
droEle1
CATCGGCACCGTACCAGTGGGTCGCGTGGAGACCGGTCTCCTTAAGCCAGGTAAATCTGCTT-T------TGCCGTTCTCC---TTCT-GATTGGTGT---TCCCCTTGTC-T--------------------GAAGTGAAGA-----------------------CTTG-----------------------------------GTTTCCTGCCCT---------------------CTCTGATTA--TTTCATTCATGTACT------CT-------------------GTGGAATTTGGGTCGGCAGTGGG----C------------------------------GGCCACTCCCACTG------------------CCACCG-------------------------ACT--CGCC-ACGAAGTCTTGCGCATGTATGCATTATTGAGCGA-CTTCGCAGT--CGCGAGCGSizeHit CountTotal NormTotal
No Reads
droRho1
CATCGGCACCGTACCAGTGGGTCGCGTGGAGACTGGTCTCCTTAAGCCAGGTAAATCTGCTG-T------TGCAGTACCCC---GTCTTGATTGG------TTCCCTTGTC-TTCCGGGTTAAG--TGGT-G-GAAGTAAGG---------------------------------------------------------------TCCTCCCACCCT---------------------CTCTGATTA--TTTCATTCATGTTCT------CT-------------------GCGAAATTTGGGTCGGCAGTGGG----C------------------------------TGCAACTCCCACTG------------------CCACCACCT------------------CGGAG-----------ATAGTCTTGCGCATGTATGCATTATTGAGAGAAT-TCTCCGT--CAAGAGCGSizeHit CountTotal NormTotal
No Reads
droFic1
CATCGGCACCGTACCAGTGGGTCGTGTGGAGACTGGTCTCCTCAAGCCAGGTAAATACGCTG-T------TGCAGTGCACC---GTCTTGACAGGTGCCCTCTTCCTCCTC-TTCCGGGT---------------------------------------------------------GCTCATGAGTGCTGGGCGAAATTTCCAGTCACCC---------------------------CTCAGCT---------------TTCT------CT-------------------GCGGAATTTGGGTCGCCAGTGGG----C------------------------------TGACACTTCCACTTCCACTC-CGCTCCCCTTGCCACCGCCC------------CCA-AACGGAGCT--CGCG-ACGAAGTCTTGCGCATGTATGCATTATTGAGCGA-CTTCTTCGT--CGAGAGCASizeHit CountTotal NormTotal
No Reads
droKik1
AATCGGAACCGTACCCGTTGGCCGCGTGGAGACGGGCATCCTTAAGCCAGGTAAGCTGGG-CT--GCTACTC-------CC---GTCTTATTTAG------CTGCATTGTTTTTCCGGGTCGAG-----TGG-GAGGTGTTT-----CC------TCTCTCTGTCTTTCT-----------------------------------GTCTACCA--CC---------------------CTTTGATTATGTTTCATTCATGTACT------CC-------------------TTGGAATTTGGGTCGGCTGTGGGAGGGG------------------------------TGCCACTCCC--------------------------------------------------TCGGCT--TGCC-ACGATGCCCTGCGCATGTATGCATTATTGAGCGAGTGTCTCTGC--CGAGAGCASizeHit CountTotal NormTotal
No Reads
droAna3
TATTGGAACGGTACCCGTTGGCCGAGTGGAGACTGGCATCCTGAAGCCAGGTAAGTCAGGCC-AGGCT-------------------------------------ATTTTC-TTTCGTGTGGGT-----T-G-GGGGTGC---------------------------------------------------------------------T------C---------------------CTTCGATTA--TTTCATTCATGTATC------CC-------------------TTTGAATTTGGGTCGCCGGTGGG----TGACAGTCAGTGGTGAGTGGTGAGTGGG---TG---------------------------------TCGTCT------------CCA-ACCGAGGCTCGCTCG-ACGAGTCCTTGCGCATGTATGCATTATTAAACGAACGTCTCCGACACGAGAGCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................GTTGGCCGAGTGGAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.005400001
................GTTGGCCGAGTGGAGACTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.004000013
................GTTGGCCGAGTGGAGACTGGCATCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.003000003
.........GGTACCCGTTGGCCGAGTGGAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.003300000
.......................GAGTGGAGACTGGCATCCTGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002100001
.......................GAGTGGAGACTGGCATCCTGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
................GTTGGCCGAGTGGAGACTGGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002100010
................GTTGGCCGAGTGGAGACTGGCATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002200000
..........GTACCCGTTGGCCGAGTGGAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002100001
.......................GAGTGGAGACTGGCATCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002100010
..................TGGCCGAGTGGAGACTGGCATCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002000002
.................TTGGCCGAGTGGAGACTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.ATTGGAACGGTACCCGTTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
...........................GGAGACTGGCATCCTGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...............CGTTGGCCGAGTGGAGACTGGCATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
..TTGGAACGGTACCCGTTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..............CCGTTGGCCGAGTGGAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
....................GCCGAGTGGAGACTGGCATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.......................GAGTGGAGACTGGCATCCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...............CGTTGGCCGAGTGGAGACTGGCATCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.......ACGGTACCCGTTGGCCGAGTGGAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
...............................................................................................................................................................................................................................................................................................................TCGCCGGTGGG----TGACAGTCAGTGGTGAG.............................................................................................................................................2811.001100000
...................GGCCGAGTGGAGACTGGCATCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...................GGCCGAGTGGAGACTGGCATCCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
droBip1
CATCGGAACCGTACCCGTCGGCCGAGTGGAGACTGGCATCCTAAAACCAGGTAAGTG--------GCT-------------------------------------ATTTTC-T--------------------GTAATTAGTT-----------------------TTTA-----------------------------------GCCTTCCACCCTTTTTTTTGTGGGGCTGTGCTCCTTCGATTA--CTTCATTCATGTACC------TC-------------------ATCGAATTTGGGTCGCTGGTGGG----TGCCAG--------------AGAGTGGGTGTTGCCACCGCCGAT---------------------GTCGTCT------------CCG-ACCGAGGCT--CGCG-ACGAGTCCTTGCGCATGTATGCATTATTAAACGAACGTCTCCGACGCGAGAGCGSizeHit CountTotal NormTotal
No Reads
dp5
CATTGGCACCGTGCCCGTTGGTCGTGTGGAGACCGGCATCCTGAAGCCAGGTAAGGATTGGAT-------GGAATCACAATGCAATCTTGATT-------------------------------------TAA-T-A----TCCCCCCCACACACACACA----------CTGCCCTG--------------------------------------C---------------------CCATGATTAGTGTTCATTCAAGTTTT------CTGC--ATCGAGAGCTGCCCATCTAAATTTGGGTCGGCATTTGG----G------------------------------TGCCGCTGCCGCTGCC---------------GCCACCG----------------T-GACCGAAGCT--CGAC-ACGAAGCCCTGCGCATGTATGCATTATTGAGC----------GT--CGAGAGCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........CCGTGCCCGTTGGTCGTGTGGAGACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000001000
..........GTGCCCGTTGGTCGTGTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........CCGTGCCCGTTGGTCGTGTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.............................AGACCGGCATCCTGAAGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
........CCGTGCCCGTTGGTCGTGTGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
.............CCCGTTGGTCGTGTGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
................GTTGGTCGTGTGGAGACCGGCATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001000000
.............CCCGTTGGTCGTGTGGAGACCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
........CCGTGCCCGTTGGTCGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
................GTTGGTCGTGTGGAGACCGGCATCCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.........CGTGCCCGTTGGTCGTGTGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
droPer2
TATTGGCACAGTGCCCGTTGGTCGTGTGGAGACCGGCATCCTGAAGCCAGGTAAGGATTGGAT-------GGAATCACAATGTAATCTTGATT-------------------------------------TAA-T-A----CCCCCCCCACAC--ACTCA----------CTGCCCTG--------------------------------------C---------------------CCATGATTAGTGTTCATTCAAGTTTT------CTGC--CTCCAGAGCTGCCCATCTAAATTTGGGTCGGCGTTTGG----G------------------------------TGCCGCCGCCGACGCCGCCGCTGCCGCTGCCGCCACCG----------------T-GACCGAAGCT--CGAC-ACGAAGCCCTGCGCATGTATGCATTATTGAGC----------GT--CGAGAGCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................GTTGGTCGTGTGGAGACCGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002010001
..........GTGCCCGTTGGTCGTGTGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
................GTTGGTCGTGTGGAGACCGGCATCCTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
..TTGGCACAGTGCCCGTTGGTCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.....GCACAGTGCCCGTTGGTCGTGTGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
...........TGCCCGTTGGTCGTGTGGAGACCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100
.......................GTGTGGAGACCGGCATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
..........GTGCCCGTTGGTCGTGTGGAGACCGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
droWil2
TATCGGAACAGTACCCGTCGGTCGTGTGGAGACTGGTGTCCTGAAGCCTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............ACCCGTCGGTCGTGTGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................20119.001963460
............ACCCGTCGGTCGTGTGGAGACTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................25118.001833660
..........GTACCCGTCGGTCGTGTGGAGACTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................27118.001812870
................GTCGGTCGTGTGGAGACTGGTGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................24115.001520850
..........GTACCCGTCGGTCGTGTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................20115.001501680
................GTCGGTCGTGTGGAGACTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................21115.001501761
................GTCGGTCGTGTGGAGACTGGTGTCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................26112.001201722
.........AGTACCCGTCGGTCGTGTGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................23112.001221630
......AACAGTACCCGTCGGTCGTGTGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................26110.001010810
...................GGTCGTGTGGAGACTGGTGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2119.00900360
...................GGTCGTGTGGAGACTGGTGTCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2319.00900450
.......ACAGTACCCGTCGGTCGTGTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2319.00902250
.......ACAGTACCCGTCGGTCGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2019.00901440
.........AGTACCCGTCGGTCGTGTGGAGACTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2818.00810700
..........GTACCCGTCGGTCGTGTGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2218.00800620
.......ACAGTACCCGTCGGTCGTGTGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2518.00810430
..................CGGTCGTGTGGAGACTGGTGTCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2418.00801412
............ACCCGTCGGTCGTGTGGAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2217.00731030
.................TCGGTCGTGTGGAGACTGGTGTCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2517.00720311
...................GGTCGTGTGGAGACTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1817.00701060
.....GAACAGTACCCGTCGGTCGTGTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2516.00602130
...........TACCCGTCGGTCGTGTGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.00630300
............ACCCGTCGGTCGTGTGGAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.00640200
...................GGTCGTGTGGAGACTGGTGTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2216.00602220
..........GTACCCGTCGGTCGTGTGGAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2416.00631020
..........GTACCCGTCGGTCGTGTGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.00510310
......................CGTGTGGAGACTGGTGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.00501040
..........GTACCCGTCGGTCGTGTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.00501220
......................CGTGTGGAGACTGGTGTCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2015.00500320
.........AGTACCCGTCGGTCGTGTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.00502300
............................GAGACTGGTGTCCTGAAGCCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2214.00420020
......AACAGTACCCGTCGGTCGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.00400130
...................GGTCGTGTGGAGACTGGTGTCCTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.00402110
........CAGTACCCGTCGGTCGTGTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.00400310
.........AGTACCCGTCGGTCGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.00401030
..................CGGTCGTGTGGAGACTGGTGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.00400310
.............CCCGTCGGTCGTGTGGAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.00420200
...............CGTCGGTCGTGTGGAGACTGGTGTCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.00400121
................GTCGGTCGTGTGGAGACTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.00400220
.........AGTACCCGTCGGTCGTGTGGAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.00430100
............ACCCGTCGGTCGTGTGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.00400400
...................GGTCGTGTGGAGACTGGTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00300120
.........AGTACCCGTCGGTCGTGTGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.00300300
........CAGTACCCGTCGGTCGTGTGGAGACTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2913.00310200
.ATCGGAACAGTACCCGTCGGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.00330000
...CGGAACAGTACCCGTCGGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00330000
...........................GGAGACTGGTGTCCTGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00300030
.......ACAGTACCCGTCGGTCGTGTGGAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300210
............ACCCGTCGGTCGTGTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00311010
.....GAACAGTACCCGTCGGTCGTGTGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00301200
...............CGTCGGTCGTGTGGAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.00300030
.......ACAGTACCCGTCGGTCGTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00300120
.........................GTGGAGACTGGTGTCCTGAAGCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00320100
......................CGTGTGGAGACTGGTGTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.00301020
............................GAGACTGGTGTCCTGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................1913.00301020
......AACAGTACCCGTCGGTCGTGTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00300030
......................CGTGTGGAGACTGGTGTCCTGAAGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00330000
........CAGTACCCGTCGGTCGTGTGGAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00310200
......AACAGTACCCGTCGGTCGTGTGGAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.00300300
.............CCCGTCGGTCGTGTGGAGACTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00300210
..........GTACCCGTCGGTCGTGTGGAGACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00300210
.........................GTGGAGACTGGTGTCCTGAAGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................2313.00330000
................GTCGGTCGTGTGGAGACTGGTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200110
..........GTACCCGTCGGTCGTGTGGAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00211000
..................CGGTCGTGTGGAGACTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200020
..............................GACTGGTGTCCTGAAGCCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00201010
................GTCGGTCGTGTGGAGACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00202000
.........AGTACCCGTCGGTCGTGTGGAGACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00201010
.ATCGGAACAGTACCCGTCGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00202000
.............................AGACTGGTGTCCTGAAGCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00210001
.....GAACAGTACCCGTCGGTCGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200020
.........................GTGGAGACTGGTGTCCTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200011
......................CGTGTGGAGACTGGTGTCCTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200110
...........TACCCGTCGGTCGTGTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00201100
...............CGTCGGTCGTGTGGAGACTGGTGTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200020
................GTCGGTCGTGTGGAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00210010
..................CGGTCGTGTGGAGACTGGTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200
..............................GACTGGTGTCCTGAAGCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200020
........CAGTACCCGTCGGTCGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00202000
............ACCCGTCGGTCGTGTGGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000
..............................GACTGGTGTCCTGAAGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200020
....GGAACAGTACCCGTCGGTCGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200110
.............CCCGTCGGTCGTGTGGAGACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200
...........TACCCGTCGGTCGTGTGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00201010
.ATCGGAACAGTACCCGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000
.........AGTACCCGTCGGTCGTGTGGAGACTGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110000
........................TGTGGAGACTGGTGTCCTGAAGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000
.........AGTACCCGTCGGTCGTGTGGAGACTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
.......ACAGTACCCGTCGGTCGTGTGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
...............................ACTGGTGTCCTGAAGCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
......................CGTGTGGAGACTGGTGTCCTGAAGCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000
......................CGTGTGGAGACTGGTGTCCTGAAGCCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
TATCGGAACAGTACCCGTCGGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
..........GTACCCGTCGGTCGTGTGGAGACTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.............CCCGTCGGTCGTGTGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100
.ATCGGAACAGTACCCGTCGGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
.ATCGGAACAGTACCCGTCGGTCGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.........................GTGGAGACTGGTGTCCTGAAGCCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
...........................GGAGACTGGTGTCCTGAAGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
........................TGTGGAGACTGGTGTCCTGAAGCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
....GGAACAGTACCCGTCGGTCGTGTGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
.......................GTGTGGAGACTGGTGTCCTGAAGCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
..............CCGTCGGTCGTGTGGAGACTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...........................GGAGACTGGTGTCCTGAAGCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
.....GAACAGTACCCGTCGGTCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
........CAGTACCCGTCGGTCGTGTGGAGACTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000
............ACCCGTCGGTCGTGTGGAGACTGGTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
............ACCCGTCGGTCGTGTGGAGACTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
.................TCGGTCGTGTGGAGACTGGTGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
................GTCGGTCGTGTGGAGACTGGTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.............CCCGTCGGTCGTGTGGAGACTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
................GTCGGTCGTGTGGAGACTGGTGTCCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
.....................TCGTGTGGAGACTGGTGTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
......AACAGTACCCGTCGGTCGTGTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
...................GGTCGTGTGGAGACTGGTGTCCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
...................GGTCGTGTGGAGACTGGTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
.................TCGGTCGTGTGGAGACTGGTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
......AACAGTACCCGTCGGTCGTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.........AGTACCCGTCGGTCGTGTGGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
........CAGTACCCGTCGGTCGTGTGGAGACTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
.............CCCGTCGGTCGTGTGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
...............CGTCGGTCGTGTGGAGACTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.......ACAGTACCCGTCGGTCGTGTGGAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
.............CCCGTCGGTCGTGTGGAGACTGGTGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
......................CGTGTGGAGACTGGTGTCCTGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
......AACAGTACCCGTCGGTCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
................................CTGGTGTCCTGAAGCCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..........................TGGAGACTGGTGTCCTGAAGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...CGGAACAGTACCCGTCGGTCGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
...CGGAACAGTACCCGTCGGTCGTGTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
......................CGTGTGGAGACTGGTGTCCTGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
............ACCCGTCGGTCGTGTGGAGACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
.....GAACAGTACCCGTCGGTCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...............CGTCGGTCGTGTGGAGACTGGTGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
................GTCGGTCGTGTGGAGACTGGTGTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
..................CGGTCGTGTGGAGACTGGTGTCCTGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
...........TACCCGTCGGTCGTGTGGAGACTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000
..............CCGTCGGTCGTGTGGAGACTGGTGTCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
....GGAACAGTACCCGTCGGTCGTGTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.........AGTACCCGTCGGTCGTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.........AGTACCCGTCGGTCGTGTGGAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000
....GGAACAGTACCCGTCGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
............ACCCGTCGGTCGTGTGGAGACTGGTGTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100
...........................GGAGACTGGTGTCCTGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001
.......................GTGTGGAGACTGGTGTCCTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..........GTACCCGTCGGTCGTGTGGAGACTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000
.........................GTGGAGACTGGTGTCCTGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
..................CGGTCGTGTGGAGACTGGTGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.ATCGGAACAGTACCCGTCGGTCGTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
........CAGTACCCGTCGGTCGTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.....GAACAGTACCCGTCGGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
............................GAGACTGGTGTCCTGAAGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000
.ATCGGAACAGTACCCGTCGGTCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
.....GAACAGTACCCGTCGGTCGTGTGGAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100
.............................AGACTGGTGTCCTGAAGCCTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2211.00110000
..................CGGTCGTGTGGAGACTGGTGTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
droVir3
CATCGGCACAGTGCCAGTCGGTCGTGTGGAAACGGGTATTCTCAAGCCAGGTATGTTAG----------------------------------CA------CTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........GTGCCAGTCGGTCGTGTGGAAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000100
...........TGCCAGTCGGTCGTGTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
..........GTGCCAGTCGGTCGTGTGGAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
..............................AACGGGTATTCTCAAGCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000100000000000000000000000000000000000000000
..TCGGCACAGTGCCAGTCGGTCGTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000100000000000000000000000000000000000000000000000000000
..TCGGCACAGTGCCAGTCGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000010000000000000000000000000000000000
..............CAGTCGGTCGTGTGGAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000010000000000000000000000000000000
..........GTGCCAGTCGGTCGTGTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
...............................ACGGGTATTCTCAAGCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
CATCGGCACAGTGCCAGTCGGTCGTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000001000000000000000000000000000000000
.......ACAGTGCCAGTCGGTCGTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
droMoj3
CATAGGCACAGTACCAGTTGGTCGTGTAGAGACTGGAGTACTCAAGCCAGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................GTTGGTCGTGTAGAGACTGGAGTACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000002
....GGCACAGTACCAGTTGGTCGTGTAGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
droGri2
CATCGGCACAGTGCCAGTCGGTCGCGTCGAAACGGGTATTCTCAAGCCAGGTAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 03:42 PM