ID:

dsi_12538

 Coordinate:

x:2200381-2200530 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.8 -20.8 -20.7

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AAACCAACTGAATCTCAAGACCTATCCCGACAGCCAGATCATCAAGGAGAGTAAGTATTGCAATTGTTTTTTCTTTTATTGAAAATTATAAAAAAAAATGAGATGAATCTTCTGTCTGTTAAATGTGCCGGGAGATGTTGTCTAATCTTATGTCTCGTTATTTTGATACCTAAAATTGTTTGGAAAACCCTAATTGCCGTTCTCTGTTCTCGTTAATGCTTAACCCAATCCAATTCTATAAACCAAATAA
**************************************************.........(((((((..((((((............(((..((((.((((((((..((((((((...((.......))))))))))...............)))))))).)))).))).............))))))...)))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 GSM343915
embryo
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M023
head
....CAACTGAATCTCAAGACCTATCCC.............................................................................................................................................................................................................................. 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.AACCAACTGAATCTCAAGAC..................................................................................................................................................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...........................CGACAGCCAGATCATCAAGGAG......................................................................................................................................................................................................... 22 0 1 2.00 2 1 1 0 0 0 0 0 0 0
.............CTCAAGACCTATCCCGACAGCCAGAT................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0
...............................AGCCAGATCATCAAG............................................................................................................................................................................................................ 15 0 1 1.00 1 0 0 0 1 0 0 0 0 0
......ACTGAATCTCAAGACCTATCCCGACA.......................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................GACAGCCAGATCATCAAGGA.......................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
................AAGACCTATCCCGACAGCCAGA.................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..................GACCTATCCCGACAGCCAGAT................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
AAACCAACTGAATCTCAAGACCT................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0
....CAACTGAATCTCAAGACCTATCCCGA............................................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................ACCTATCCCGACAGCCAGATC.................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................GTAAGTATTGCAATTGTTT..................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...............................AGCCAGATCCTCAAGG........................................................................................................................................................................................................... 16 1 6 0.17 1 0 0 0 1 0 0 0 0 0
..................................CAGATCATCAAGGAAA........................................................................................................................................................................................................ 16 1 6 0.17 1 0 0 0 0 0 1 0 0 0
............................................................................................................................GTGCCGGCAGATGTT............................................................................................................... 15 1 9 0.11 1 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................CTAAAAGCCGTTCTCAGTTC......................................... 20 3 10 0.10 1 0 0 0 0 0 0 0 0 1
...................................................................................................................CTTTTAAATGGACCGGGAGA................................................................................................................... 20 3 11 0.09 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................ATGTTGTCTGACCTTAT................................................................................................... 17 2 17 0.06 1 0 0 0 0 0 0 0 1 0
......................................................................................................ATGAATTTTCTGTCT..................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 1 0
.....................................................................TTTCTGTTATTGAAAA..................................................................................................................................................................... 16 1 20 0.05 1 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

TTTGGTTGACTTAGAGTTCTGGATAGGGCTGTCGGTCTAGTAGTTCCTCTCATTCATAACGTTAACAAAAAAGAAAATAACTTTTAATATTTTTTTTTACTCTACTTAGAAGACAGACAATTTACACGGCCCTCTACAACAGATTAGAATACAGAGCAATAAAACTATGGATTTTAACAAACCTTTTGGGATTAACGGCAAGAGACAAGAGCAATTACGAATTGGGTTAGGTTAAGATATTTGGTTTATT
**************************************************.........(((((((..((((((............(((..((((.((((((((..((((((((...((.......))))))))))...............)))))))).)))).))).............))))))...)))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
..........................GGATGTCGGTCTAGTGGTTGCT.......................................................................................................................................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................ATGAGAATACAGAGGAA........................................................................................... 17 2 20 0.95 19 19 0 0 0 0 0 0 0 0
..............................................................................................................................................ATGAGAATACAGAGGAAT.......................................................................................... 18 2 8 0.75 6 5 0 0 0 0 0 1 0 0
.............................................................................................................................................GATGAGAATACAGAGGAA........................................................................................... 18 2 7 0.71 5 5 0 0 0 0 0 0 0 0
.............................................................................................................................................GATGAGAATACAGAGGA............................................................................................ 17 2 10 0.50 5 5 0 0 0 0 0 0 0 0
..........................GGGTGTCGGTCTAGTGGTTGCT.......................................................................................................................................................................................................... 22 3 4 0.50 2 0 2 0 0 0 0 0 0 0
................................................................................................................................................GAGAATACAGAGGAATGAAACT.................................................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................GATGAGAATACAGAGGAAT.......................................................................................... 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................GAGAATACAGAGCAAT.......................................................................................... 16 1 2 0.50 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................TAGAATACAGAGGAA........................................................................................... 15 1 10 0.40 4 3 0 0 0 0 0 0 0 1
.........................GGCCTGTCGATCTAGTAG............................................................................................................................................................................................................... 18 2 3 0.33 1 0 0 1 0 0 0 0 0 0
..............................................................................................................................................CTTAGAATACAGAGGAAT.......................................................................................... 18 2 7 0.29 2 0 0 0 2 0 0 0 0 0
................................................................................................................................................GAGAATACAGAGGAATAAA....................................................................................... 19 2 4 0.25 1 1 0 0 0 0 0 0 0 0
............................................................................................................................CACGGCCCATTACAACAGGTT......................................................................................................... 21 3 4 0.25 1 0 1 0 0 0 0 0 0 0
.................CCTGGATAGGCCTGTCG........................................................................................................................................................................................................................ 17 2 5 0.20 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................TAGAATACAGAGGAAT.......................................................................................... 16 1 5 0.20 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................GATGAGAATACAGAG.............................................................................................. 15 1 5 0.20 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................TGAGAATACAGAGGAATGAAA...................................................................................... 21 3 7 0.14 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................AGAATACAGAGGAATCAA....................................................................................... 18 2 7 0.14 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................GAGAATACAGAGCAA........................................................................................... 15 1 8 0.13 1 0 0 1 0 0 0 0 0 0
.........................GGGCCGACGGTCTAGTAGGTC............................................................................................................................................................................................................ 21 3 8 0.13 1 0 0 0 0 0 1 0 0 0
.................................................................................................................................................AGAATACAGAGGAATA......................................................................................... 16 1 9 0.11 1 0 0 0 0 0 0 0 1 0
........................AGGGCTGTCCGGCTAGT................................................................................................................................................................................................................. 17 2 9 0.11 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................AGAATACAGAGGAATCA........................................................................................ 17 2 13 0.08 1 0 0 0 0 1 0 0 0 0
...........................................................................................................................................AAGATGAGAATACAGAGGAA........................................................................................... 20 3 17 0.06 1 0 0 0 0 1 0 0 0 0
..................................................................................................................................................GAATACAGAGGAATGAA....................................................................................... 17 2 18 0.06 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................AGAATACAGAGGAATGAAC...................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................GTTAGAATACAGAGGAA........................................................................................... 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:2200331-2200580 - dsi_12538 AAACCA-----ACTGAATCTCAAGACCTATCCCGACAGCCAGATCATCAAGGAGAGTAAGTATT-GCAA-----------------------T-----TGTTTTT--TC-----------------------TTTTAT------------------------TGAAAAT-------------TATAAAAAA-AAATGAGATGAATCTTCTGTCTGTTAAATGTGCCGGG----AGATGTTGTCTAATCTTA----------------------TGTC-TCGTTATTTT------GATA-----CCT----------AAAA---TT-------GTTTGGAAAACCC-----TAATTGCCGTTCT-CTGT---T----CTCGTT--AATGCTTAACCCAA--TC-------------------------CAATTCT--AT----AA-----------------------------ACCAA-A--TAA
droSec2 scaffold_10:2161940-2162190 - AAACCA-----ACTGAATCTCAAGACCTATCCCGACAGCCAGATCATCAAGGAGAGTAAGTATT-GCAA-----------------------T-----TGTTTTT--TCT-----------------------TTTATTGAAAAT------------------TAAAAAAACAAAAA---------------AAATGAGATGAATCTT----CTGTTAAATGTGCCGGG----AGACATTGTCTAATCTTA----------------------TGTC-TCGTTATTTT------GATA-----CCT----------AAAA---TT-------GTTTGGAAAACCC-----TAATTGCCGTTCT-CTGT---T----CTCGTT--AATGCTTAACCCAA--TC-------------------------CAATACT--AT----AA-----------------------------ACCAA-A--TAA
dm3 chrX:2386163-2386428 - GAACCA-----ACTGAATCTCAAGACCTATCCCGACAGCCAGATCATCAAGGAGAGTAAGTATTGCCACAT--T-AATTC---------GCAT-----TGTTTTT--CAT-----------------------TTTATTGGAAAT--------T--------C-AAAAA-A-AATAA---------------AAATGAGATGAATCTTCTGTCTGTTAAATGTGCCGGG----AGACATTGTCTAATCTTA----------------------TGTC-TCGTTATTTT------GATA-----CTT----------AAAA---TT-------GTTTGTAAAACCC-----TAATTGCCGTTCT-CTGT---T----CTCGTT--AATGCTTAACCCAA--TC-------------------------AAATTCT--AT----AA-----------------------------ACCAA-A--TAA
droEre2 scaffold_4644:2335458-2335713 - GAACCA-----ACTGAATCTCAAGACCTATCCCGACAGCCAGATCATCAAGGAGAGTAAGTATTACCA------------------GCCACAT-----TGTTTCT--CCT-----------------------ATTATTGCAAAT-----------ATTTAACAAAAAA--CAAAAA---------------AAAAGAGA----------GTCTGTTAAATGTTCCGGG----AGACGTTGTTTAATCTTA----------------------TATC-TCGTTATTCT------GATA-----CCT----------AAAA---TC-------GTTTGGAAAACCC-----TAATTGCCGTTCT-CTGT---T----CTCGTT--AATGCTTAACCCAA--TC-------------------------CAATTCT--AT----AA-----------------------------ACCAA-A--TAA
droYak3 X:5959602-5959829 + GAACCA-----ACTGAATCTCAAGACCTATCCCGACAGCCAGATCATCAAGGAGAGTAAGTATA-TT---------------------------------------------------------------------------------TAAGTT--A-----------------TAA---------------GAAAGAGATGAATCTTCTGTCTGTTAAATGTTCCGGG----AGACGTTGTTTAATCTTA----------------------TATC-TCATTGTTCT------GATA---TACCT----------AAAA---TC-------GTTTGGAAAACCC-----TAATTGCCGTTCT-CTGT---T----CTCGTT--AATGCCTAACCCAA--TT-------------------------CAAATAT--AT----AA-----------------------------ACCAA-A--TAA
droEug1 scf7180000409277:70848-71109 - GCCCCA-----GTTCAATCTCAAGACCTATCCAGACAGCCAGATCATCAAGGAGAGTAAGTATC-CTGCAAGGCATATTCGGCCTAGCCCCAT-----TGTTCT---CC------------------------TATAT------------------------CTGAAAA-------------TATTACCAAA---AAAGATGAAA--GATGTTTGTTAAATGTTTCGGG----AGCAATCG---------------------------------ATC-TCGTTAATTT------GATA-----CT---------TTAAAA---ATGAT----TTTTGGACATCCC-----TAATTGCCGTTCT-TTGT---T----CTCGTT--AATGCTTAACCCAA--CC-------------------------CAATTCTCTAT----AA-----------------------------ACCAA-A--ATA
droBia1 scf7180000301760:4779957-4780208 + GAACCA-----ACTGAAACTCAGGACCTATCCCGACAACCAGATCATCAAGGAGAGTAAGTATT-CCAGAGGTCA-ATTGCGAG-AGCCTCAT-----CGTTTT---CC------------------------TAAGT------------------------ATAAAAA-------------TATGACAAAA---------------------TGTTATATGTTCCGTG----AGCAATTGTTTAATCGTA----------------------AATC-TTGTTGTTTT------GACA-----TT---------TTTAAATA----------TTTTGGACAACCC-----TAATTGCCGTTCT-TTGT---T----CTCGTT--AATGCTTAACCCAA--CC-------------------------CAATTCT---T----AA-----------------------------ACCAAAACAAAA
droTak1 scf7180000415151:421408-421636 + GAACCA-----ATTGAAACTCAAGACCTATCCCGACAACCAAATCATTAAGGAGAGTAAGTATC-ATAG-----------------------T-----TGTT-----C------------------------TTAAAT------------------------C-AAAAA-------------TATTAAAAAA---------------------TGTTAAATGTTTCGGG----AGCCATTATTTAATCTTA----------------------AATC-TCGCTGTTTT------GATG-----TT---------TTAAACTA-CT-------TTTTGGACATCCC-----TAATTGCCGTTCT-TTGT---T----CTCGTT--AATGCTTAACCCAA--CC-------------------------CAATTCT--AT----AA-----------------------------ACCAAAA--TAA
droEle1 scf7180000491011:702608-702882 - GAACCA-----ATTGAATCTCAAGACCTACCCAGCCGCTCAGATCATCAAGGAGAGTAAGTATC-CCAATGGGCA-ATTCTCCA-TGCTCCAT-----TGTTCCT--CGT--------------------ACATATAT------------------------CTAAAAG-------------TATTACAAAA---ATATATCAATCTTGTGTCTGTTAAATGTTCTGGG----AGCAATTATTTAAACTCA----------------------ATTT-TCGTTGTATT------GATA-----TT---------TTAAAATA--T-------TTTTGGACAACCC-----TAATTGCCGTTCT-TTGT---T----CTCGTT--AATGCTTAACCCAA--TT-------------------------CAATTCT--AT----AA-----------------------------ACCAAAA--TAA
droRho1 scf7180000779506:493110-493372 - TCCCCA-----ATTGAACCTCAAGACCTATCCCGACAGCCAGACCATCAAGGAGAGTAAGTATC-CCAT-------------------------------------------ATATCAAAAATATCTCGTACATATAT------------------------CAAAAAG-------------TATTACAAA-AAAAGAGATCAATCTTGTGTTTGTTAAATGTTCTGGG----AGCAATCGCTTAATCTTA----------------------AATC-TCGTTATGAT------GATA-----TT---------GTAAAATA--T-------TTTTGGACAACCC-----TAATTGCCGTTCT-TTGT---T----CTCGTT--AATGCTTAACCCAA--CC-------------------------CAATCAT--AT----AA-----------------------------ACCAAAA--TAA
droFic1 scf7180000453927:186680-186906 - GACCCA-----ATTGAATCTCAAGACTTATCCCGACAGTCAGATTATCAAGGAGAGTAAGTATG-CCAG--GGCA-A---------------C-----CGTC-----C------------------------CTATAT------------------------CTAAAAA-------------TAT-ACAAAAAGTTTAGATCAATATTTTACCTGTTAAATAATC-AAA----ATCAATTG---------------------------------------------TT------GATA-----TT---------TGAAAATA--T-------TTTTGGACAACCC-----TAATTGCCGTTCT-TTGT---T----CTCGTT--AATGCTTAACCCAA--CC-------------------------CAATTCC--AT----A--------------------------------CAA-A--TAT
droKik1 scf7180000302258:525888-526110 - A--TCAACCGTGCTGAATCTCAAGACCTATCCCGACAGCCAGATCATCAAGGAGAGTAAGTATT-CAGC--CGCA------CAC-TGCC--TT-----TGTTTTTCTCCCAACTAAAAAAAATAT-----------------------TA-----------------AG--CA-AAA---------------CAAAGACATGACA-------------------------------------------------------------------------CCGTTAT------------------------------------G--T-------TCTTCGACAACCC-----TAATTGCCGTTCT-TTGT---T----CTCGTT--AATGCTTAAC--AA--CC-------------------------CAATTAT--TTTAATGA---------ACAAAAAAAACCAAT---------A-A--TAA
droAna3 scaffold_12929:2296123-2296396 - CAATAA-----ATTGAACCTGAAGACCTATCCCGACAGCCAGATCATCAAGGAGAGTAAGTATT-CCAAAC--T-AATCC---------ACCTTAATATGCTTTT--CA-----------------------------------------ACTTCC---------A----------------------------AAGAAA-------TCTGTTCGCGATCTGTTCAGTAACAAAGCAATAT---------------------------------AACTCTGTTATTCTGTTATATATATTTACTT---------TTTAAATACTT-------TTTTGGACAATCC-----TAATTGCCGTTCT-CTGT---T----CTCGTT--AATGCTTAACCCAA--CCAAAAAAAAAAACTCAAAATCAAACCCAATTAT--AT----AA-----------------------------AACAA-----AA
droBip1 scf7180000396434:290081-290340 - CAACAA-----ACTGAACCTGAAGACCTATCCCGACAGCCAGATCATCAAGGAGAGTAAGTATG-CCAGAC--T-AATTCATAC-AACT--TA-----TGCTTTT--CC-----------------------------------------AATTCC---------A-----CA-AAAGAAAGTACTACAAC---CAGAAATCGAGATTTT-----------GTTCAG------------------------------------------------TA-ACATTCTGTT------GATA-----TATACAAATTTTTGAAATA--C--TTTTTGTTTGGAAAATCC-----TAATTGCCGTTCT-CTGT---T----CTCGTT--AATGCTTAACCCAA--CCAA-T---------CAAAATCAAACCCAATTCT--AT-----------------------------------------A--TAA
dp5 XL_group3a:2061669-2061861 - CAGTCA-----ATTGAATCTCAAGACCTATCCCGATAGCCAGATCATCAAGGAGCGTAAGTATC-T-GC--CG-----------TTGCC---------------------ATCAATCAAA-------------------------------------------------------------------------------------------------------------------CCATTGTT--------------------TTGCCGTTCT---------------------------ATGT----------TCTTTA----C-------GTTTCTTCGAATC-----TACATAATGTTCTACCATTACTATAA-CTTTTAAAATGCTTAACCCACAACCAAAAATG----------------------ACC--AT----AA-----------------------------CCC---A--TAA
droPer2 scaffold_11:2614464-2614656 + CAGTCA-----ATTGAATCTCAAGACCTATCCCGATAGCCAGATCATCAAGGAGCGTAAGTATA-T-GC--CG-----------TTGCC---------------------ATCAATCAAA-------------------------------------------------------------------------------------------------------------------CCATTGTT--------------------TTGCCGTTCT---------------------------ATGT----------TCTTTA----C-------GTTTCTTCGAATC-----TACATAATGTTCTACCATTACTATAA-CTTTTAAAATGCTTAACCCACAACCAAAAATG----------------------ACC--AT----AA-----------------------------CCC---A--TAA
droWil2 scf2_1100000004909:12094072-12094358 - AA-TCA-----ATTGTTGCTAAAGACCTATCCCGATAGCCAAAGCATTAAAGAAAGTAAGTATC-GAAT--GATG-A-------------------------------------------------------------------TTATAAAGTT--ATCGATCGGAAAA--TAAA---------CGTCAGT---CTGTGAT------------CGATAGTTATTTAAGG----GATCGTAATTGG-GCTTTGCCTTGATACGATTGCCT-----------------TT------GGCT----TT----------TTTTTATA--T-------TTCTACTCAACTCAACTCT-CAT-GTGTTTTACCATTGTT----TTAATT--AATGCTTAACCCAA--CCAA-AATG----------------------ACT--AT----AACCTACCACAAAAAAAAAAAACAATATTATCATAA-A--TAA
droVir3 scaffold_12928:1380734-1380842 - GT--TG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTT----------------------TTTT-TTTTT--TTT------TT-----TGTTT----------CCAT---TC-------GTTTTTTTGACTC-----TACATAATGTTCTACCAT---T----ACTTTT--AATGCTTAACCCAA--CCAA-AA-----------------------TGAC--AT----AA-----------------------------CCC-A-T--AAA
droMoj3 scaffold_6473:13628547-13628659 + TGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCTT----------------------TGTT-TTTTTTGTCT------ACAA---TGGTT----------ATAA---TG-------GTTTGTTTGATTC-----TACATAATGCTTTACCAT---T----ACTTTT--AATGCTTAACCCAA--CCAA-AA-----------------------TGAC--AT----AA-----------------------------CCC-A-T--AAA
droGri2 scaffold_15203:8351113-8351229 + TGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTT--TCTTT----------------------CCTT-TTGTTCTTTG------TATT-----TG----------TTTAATA--T-------GTTTACTCGACTC-----AACATAATGTTCTACCAT---T----ACTTTT--AATGCTTAACCCAA--CCAAAAA-----------------------TGAC--AT----AA-----------------------------CCCCA-T--AAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAACCA-----ACTGAATCTCAAGACCTATCCCGACAGCCAGATCATCAAGGAGAGTAAGTATT-GCAA-----------------------T-----TGTTTTT--TC-----------------------TTTTAT------------------------TGAAAAT-------------TATAAAAAA-AAATGAGATGAATCTTCTGTCTGTTAAATGTGCCGGG----AGATGTTGTCTAATCTTA----------------------TGTC-TCGTTATTTT------GATA-----CCT----------AAAA---TT-------GTTTGGAAAACCC-----TAATTGCCGTTCT-CTGT---T----CTCGTT--AATGCTTAACCCAA--TC-------------------------CAATTCT--AT----AA-----------------------------ACCAA-A--TAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....CA-----ACTGAATCTCAAGACCTATCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200200000000000000
.AACCA-----ACTGAATCTCAAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200200000000000000
................................CGACAGCCAGATCATCAAGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200100000000100000
..................CTCAAGACCTATCCCGACAGCCAGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
....................................AGCCAGATCATCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000001000000000
...........ACTGAATCTCAAGACCTATCCCGACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
.................................GACAGCCAGATCATCAAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
.....................AAGACCTATCCCGACAGCCAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000100000
.......................GACCTATCCCGACAGCCAGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
AAACCA-----ACTGAATCTCAAGACCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
....CA-----ACTGAATCTCAAGACCTATCCCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
........................ACCTATCCCGACAGCCAGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
.......................................................GTAAGTATT-GCAA-----------------------T-----TGTTT..............................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
droSec2
AAACCA-----ACTGAATCTCAAGACCTATCCCGACAGCCAGATCATCAAGGAGAGTAAGTATT-GCAA-----------------------T-----TGTTTTT--TCT-----------------------TTTATTGAAAAT------------------TAAAAAAACAAAAA---------------AAATGAGATGAATCTT----CTGTTAAATGTGCCGGG----AGACATTGTCTAATCTTA----------------------TGTC-TCGTTATTTT------GATA-----CCT----------AAAA---TT-------GTTTGGAAAACCC-----TAATTGCCGTTCT-CTGT---T----CTCGTT--AATGCTTAACCCAA--TC-------------------------CAATACT--AT----AA-----------------------------ACCAA-A--TAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................AATTGCCGTTCT-CTGT---T----CTC..........................................................................................................2011.0010010
..........................CTATCCCGACAGCCAGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..................CTCAAGACCTATCCCGACAGCCAGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
....................CAAGACCTATCCCGACAGCCAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
...................................CAGCCAGATCATCAAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
....................................AGCCAGATCATCAAGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
dm3
GAACCA-----ACTGAATCTCAAGACCTATCCCGACAGCCAGATCATCAAGGAGAGTAAGTATTGCCACAT--T-AATTC---------GCAT-----TGTTTTT--CAT-----------------------TTTATTGGAAAT--------T--------C-AAAAA-A-AATAA---------------AAATGAGATGAATCTTCTGTCTGTTAAATGTGCCGGG----AGACATTGTCTAATCTTA----------------------TGTC-TCGTTATTTT------GATA-----CTT----------AAAA---TT-------GTTTGTAAAACCC-----TAATTGCCGTTCT-CTGT---T----CTCGTT--AATGCTTAACCCAA--TC-------------------------AAATTCT--AT----AA-----------------------------ACCAA-A--TAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................GCCAGATCATCAAGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................18111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000100100000000000000000010000000000000000000000112000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................ACCC-----TAATTGCCGTTCT-CTGT---T----CTCGT........................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TCCCGACAGCCAGATCATCAAGGAGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AGACCTATCCCGACAGCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
....................................................................................................................................................................................................GAGATGAATCTTCTGTCTGTT............................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TCTCAAGACCTATCCCGACAGCCAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AGCCAGATCATCAAGGAGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TATCCCGACAGCCAGATCATCAAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AGCCAGATCATCAAGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000
.......................GACCTATCCCGACAGCCAGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CCCGACAGCCAGATCATCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GCCAGATCATCAAGGAGAGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................CAAGACCTATCCCGACAGCCAGATCATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CCA-----ACTGAATCTCAAGACCTATCCCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TATCCCGACAGCCAGATCATCAAGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................AAATGTGCCGGG----AGACATTG....................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CTCAAGACCTATCCCGACAGCCAGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CCA-----ACTGAATCTCAAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CAGATCATCAAGGAGAGTAAGTATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................GATGAATCTTCTGTCTGTTA...........................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CTATCCCGACAGCCAGATCATCAAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GCCAGATCATCAAGGAGAGTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................T-AATTC---------GCAT-----TGTTTTT--CA........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CTCAAGACCTATCCCGACAGCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................T-------GTTTGTAAAACCC-----TAATTGCCGT.............................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................T-AATTC---------GCAT-----TGTTTTT--CAT-----------------------TTTATTGGA.......................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CTGAATCTCAAGACCTATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGAATCTCAAGACCTATCCCGACAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ATCCCGACAGCCAGATCATCAAGGAGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................GACCTATCCCGACAGCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ACTGAATCTCAAGACCTATCCCGACAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................T-CTGT---T----CTCGTT--AATGCTTAACCCAA--.....................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ACAGCCAGATCATCAAGGAGAGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................TGTGCCGGG----AGACATTGTCTAA...............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.............................TCCCGACAGCCAGATCATCAAGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................AA---TT-------GTTTGTAAAACCC-----TAATTGCTC..............................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................TCTGTTAAATGTGCCGGG----AGACATTGT...................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....CA-----ACTGAATCTCAAGACCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................TTC---------GCAT-----TGTTTTT--CAT-----------------------TTTATTGGA.......................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ATCCCGACAGCCAGATCATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................CC-----TAATTGCCGTTCT-CTGT---T----C............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................TCTGTTAAATGTGCCGGG----AGACATTG....................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................CTATCCCGACAGCCAGATCATCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...............................CCGACAGCCAGATCATCAAGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AGACCTATCCCGACAGCCAGATCATCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....A-----ACTGAATCTCAAGACCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................T-------GTTTGTAAAACCC-----TAATTGCCGTTCT-C........................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CCCGACAGCCAGATCATCAAGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TTCT-CTGT---T----CTCGTT--AATGCTTAACCCAA--.....................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GACAGCCAGATCATCAAGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...........................TATCCCGACAGCCAGATCATCAAGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................CTGTTAAATGTGCCGGG----AG..........................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
........................................................................................................T--CAT-----------------------TTTATTGGAAAT--------T--------C-AAAAA-A-AA.......................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CAGCCAGATCATCAAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TGCCGGG----AGACATTGTCTAATCTTA----------------------....................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TGCTTAACCCAA--TC-------------------------AAATTCT--AT----AA-----------------------------AC..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................T--CAT-----------------------TTTATTGGAAAT--------T--------C-AAAAA-A-AATAA---------------.....................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CAT--T-AATTC---------GCAT-----TGTTAC.............................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GTC-TCGTTATTTT------GATG-----T.....................................................................................................................................................................................18140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
droEre2
GAACCA-----ACTGAATCTCAAGACCTATCCCGACAGCCAGATCATCAAGGAGAGTAAGTATTACCA------------------GCCACAT-----TGTTTCT--CCT-----------------------ATTATTGCAAAT-----------ATTTAACAAAAAA--CAAAAA---------------AAAAGAGA----------GTCTGTTAAATGTTCCGGG----AGACGTTGTTTAATCTTA----------------------TATC-TCGTTATTCT------GATA-----CCT----------AAAA---TC-------GTTTGGAAAACCC-----TAATTGCCGTTCT-CTGT---T----CTCGTT--AATGCTTAACCCAA--TC-------------------------CAATTCT--AT----AA-----------------------------ACCAA-A--TAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................ATCTCAAGACCTATCCCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0021001000
....................................AGCCAGATCATCAAGGAGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0021000100
....................................AGCCAGATCATCAAGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020001100
.....................................GCCAGATCATCAAGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.................................GACAGCCAGATCATCAAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
....................................................................................................................................................................................................................................................................................................................................................AACCC-----TAATTGCCGTTCT-CT.......................................................................................................................2011.0010001000
...CCA-----ACTGAATCTCAAGACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
..............................CCCGACAGCCAGATCATCAAGGAGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
....................................AGCCAGATCATCAAGGAGAGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
...............................CCGACAGCCAGATCATCAAGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
..................CTCAAGACCTATCCCGACAGCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
droYak3
GAACCA-----ACTGAATCTCAAGACCTATCCCGACAGCCAGATCATCAAGGAGAGTAAGTATA-TT---------------------------------------------------------------------------------TAAGTT--A-----------------TAA---------------GAAAGAGATGAATCTTCTGTCTGTTAAATGTTCCGGG----AGACGTTGTTTAATCTTA----------------------TATC-TCATTGTTCT------GATA---TACCT----------AAAA---TC-------GTTTGGAAAACCC-----TAATTGCCGTTCT-CTGT---T----CTCGTT--AATGCCTAACCCAA--TT-------------------------CAAATAT--AT----AA-----------------------------ACCAA-A--TAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................AGCCAGATCATCAAGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
...............AATCTCAAGACCTATCCCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
droEug1
GCCCCA-----GTTCAATCTCAAGACCTATCCAGACAGCCAGATCATCAAGGAGAGTAAGTATC-CTGCAAGGCATATTCGGCCTAGCCCCAT-----TGTTCT---CC------------------------TATAT------------------------CTGAAAA-------------TATTACCAAA---AAAGATGAAA--GATGTTTGTTAAATGTTTCGGG----AGCAATCG---------------------------------ATC-TCGTTAATTT------GATA-----CT---------TTAAAA---ATGAT----TTTTGGACATCCC-----TAATTGCCGTTCT-TTGT---T----CTCGTT--AATGCTTAACCCAA--CC-------------------------CAATTCTCTAT----AA-----------------------------ACCAA-A--ATASizeHit CountTotal NormTotal
No Reads
droBia1
GAACCA-----ACTGAAACTCAGGACCTATCCCGACAACCAGATCATCAAGGAGAGTAAGTATT-CCAGAGGTCA-ATTGCGAG-AGCCTCAT-----CGTTTT---CC------------------------TAAGT------------------------ATAAAAA-------------TATGACAAAA---------------------TGTTATATGTTCCGTG----AGCAATTGTTTAATCGTA----------------------AATC-TTGTTGTTTT------GACA-----TT---------TTTAAATA----------TTTTGGACAACCC-----TAATTGCCGTTCT-TTGT---T----CTCGTT--AATGCTTAACCCAA--CC-------------------------CAATTCT---T----AA-----------------------------ACCAAAACAAAASizeHit CountTotal NormTotal
No Reads
droTak1
GAACCA-----ATTGAAACTCAAGACCTATCCCGACAACCAAATCATTAAGGAGAGTAAGTATC-ATAG-----------------------T-----TGTT-----C------------------------TTAAAT------------------------C-AAAAA-------------TATTAAAAAA---------------------TGTTAAATGTTTCGGG----AGCCATTATTTAATCTTA----------------------AATC-TCGCTGTTTT------GATG-----TT---------TTAAACTA-CT-------TTTTGGACATCCC-----TAATTGCCGTTCT-TTGT---T----CTCGTT--AATGCTTAACCCAA--CC-------------------------CAATTCT--AT----AA-----------------------------ACCAAAA--TAASizeHit CountTotal NormTotal
No Reads
droEle1
GAACCA-----ATTGAATCTCAAGACCTACCCAGCCGCTCAGATCATCAAGGAGAGTAAGTATC-CCAATGGGCA-ATTCTCCA-TGCTCCAT-----TGTTCCT--CGT--------------------ACATATAT------------------------CTAAAAG-------------TATTACAAAA---ATATATCAATCTTGTGTCTGTTAAATGTTCTGGG----AGCAATTATTTAAACTCA----------------------ATTT-TCGTTGTATT------GATA-----TT---------TTAAAATA--T-------TTTTGGACAACCC-----TAATTGCCGTTCT-TTGT---T----CTCGTT--AATGCTTAACCCAA--TT-------------------------CAATTCT--AT----AA-----------------------------ACCAAAA--TAASizeHit CountTotal NormTotal
No Reads
droRho1
TCCCCA-----ATTGAACCTCAAGACCTATCCCGACAGCCAGACCATCAAGGAGAGTAAGTATC-CCAT-------------------------------------------ATATCAAAAATATCTCGTACATATAT------------------------CAAAAAG-------------TATTACAAA-AAAAGAGATCAATCTTGTGTTTGTTAAATGTTCTGGG----AGCAATCGCTTAATCTTA----------------------AATC-TCGTTATGAT------GATA-----TT---------GTAAAATA--T-------TTTTGGACAACCC-----TAATTGCCGTTCT-TTGT---T----CTCGTT--AATGCTTAACCCAA--CC-------------------------CAATCAT--AT----AA-----------------------------ACCAAAA--TAASizeHit CountTotal NormTotal
No Reads
droFic1
GACCCA-----ATTGAATCTCAAGACTTATCCCGACAGTCAGATTATCAAGGAGAGTAAGTATG-CCAG--GGCA-A---------------C-----CGTC-----C------------------------CTATAT------------------------CTAAAAA-------------TAT-ACAAAAAGTTTAGATCAATATTTTACCTGTTAAATAATC-AAA----ATCAATTG---------------------------------------------TT------GATA-----TT---------TGAAAATA--T-------TTTTGGACAACCC-----TAATTGCCGTTCT-TTGT---T----CTCGTT--AATGCTTAACCCAA--CC-------------------------CAATTCC--AT----A--------------------------------CAA-A--TATSizeHit CountTotal NormTotal
No Reads
droKik1
A--TCAACCGTGCTGAATCTCAAGACCTATCCCGACAGCCAGATCATCAAGGAGAGTAAGTATT-CAGC--CGCA------CAC-TGCC--TT-----TGTTTTTCTCCCAACTAAAAAAAATAT-----------------------TA-----------------AG--CA-AAA---------------CAAAGACATGACA-------------------------------------------------------------------------CCGTTAT------------------------------------G--T-------TCTTCGACAACCC-----TAATTGCCGTTCT-TTGT---T----CTCGTT--AATGCTTAAC--AA--CC-------------------------CAATTAT--TTTAATGA---------ACAAAAAAAACCAAT---------A-A--TAASizeHit CountTotal NormTotal
No Reads
droAna3
CAATAA-----ATTGAACCTGAAGACCTATCCCGACAGCCAGATCATCAAGGAGAGTAAGTATT-CCAAAC--T-AATCC---------ACCTTAATATGCTTTT--CA-----------------------------------------ACTTCC---------A----------------------------AAGAAA-------TCTGTTCGCGATCTGTTCAGTAACAAAGCAATAT---------------------------------AACTCTGTTATTCTGTTATATATATTTACTT---------TTTAAATACTT-------TTTTGGACAATCC-----TAATTGCCGTTCT-CTGT---T----CTCGTT--AATGCTTAACCCAA--CCAAAAAAAAAAACTCAAAATCAAACCCAATTAT--AT----AA-----------------------------AACAA-----AASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................AGCCAGATCATCAAGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002020000
.....A-----ATTGAACCTGAAGACCTATCCCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
....AA-----ATTGAACCTGAAGACCTATCCCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
...............AACCTGAAGACCTATCCCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.....................................GCCAGATCATCAAGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
..............GAACCTGAAGACCTATCCCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................CCCAA--CCAAAAAAAAAAACC......................................................................2030.331010000
..................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAACTCAAAA.................................................................18140.071010000
droBip1
CAACAA-----ACTGAACCTGAAGACCTATCCCGACAGCCAGATCATCAAGGAGAGTAAGTATG-CCAGAC--T-AATTCATAC-AACT--TA-----TGCTTTT--CC-----------------------------------------AATTCC---------A-----CA-AAAGAAAGTACTACAAC---CAGAAATCGAGATTTT-----------GTTCAG------------------------------------------------TA-ACATTCTGTT------GATA-----TATACAAATTTTTGAAATA--C--TTTTTGTTTGGAAAATCC-----TAATTGCCGTTCT-CTGT---T----CTCGTT--AATGCTTAACCCAA--CCAA-T---------CAAAATCAAACCCAATTCT--AT-----------------------------------------A--TAASizeHit CountTotal NormTotal
No Reads
dp5
CAGTCA-----ATTGAATCTCAAGACCTATCCCGATAGCCAGATCATCAAGGAGCGTAAGTATC-T-GC--CG-----------TTGCC---------------------ATCAATCAAA-------------------------------------------------------------------------------------------------------------------CCATTGTT--------------------TTGCCGTTCT---------------------------ATGT----------TCTTTA----C-------GTTTCTTCGAATC-----TACATAATGTTCTACCATTACTATAA-CTTTTAAAATGCTTAACCCACAACCAAAAATG----------------------ACC--AT----AA-----------------------------CCC---A--TAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................CAAGACCTATCCCGATAGCCAGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
....CA-----ATTGAATCTCAAGACCTATCCCGATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
.................TCTCAAGACCTATCCCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010000000
.............TGAATCTCAAGACCTATCCCGATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001000000
droPer2
CAGTCA-----ATTGAATCTCAAGACCTATCCCGATAGCCAGATCATCAAGGAGCGTAAGTATA-T-GC--CG-----------TTGCC---------------------ATCAATCAAA-------------------------------------------------------------------------------------------------------------------CCATTGTT--------------------TTGCCGTTCT---------------------------ATGT----------TCTTTA----C-------GTTTCTTCGAATC-----TACATAATGTTCTACCATTACTATAA-CTTTTAAAATGCTTAACCCACAACCAAAAATG----------------------ACC--AT----AA-----------------------------CCC---A--TAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....CA-----ATTGAATCTCAAGACCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
....CA-----ATTGAATCTCAAGACCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
....................................AGCCAGATCATCAAGGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
...............................................................................................................................................................................................................................................TGTT--------------------TTGCCGTTCT---------------------------ATGT----------TCT........................................................................................................................................................................2111.001001000
.AGTCA-----ATTGAATCTCAAGACCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
droWil2
AA-TCA-----ATTGTTGCTAAAGACCTATCCCGATAGCCAAAGCATTAAAGAAAGTAAGTATC-GAAT--GATG-A-------------------------------------------------------------------TTATAAAGTT--ATCGATCGGAAAA--TAAA---------CGTCAGT---CTGTGAT------------CGATAGTTATTTAAGG----GATCGTAATTGG-GCTTTGCCTTGATACGATTGCCT-----------------TT------GGCT----TT----------TTTTTATA--T-------TTCTACTCAACTCAACTCT-CAT-GTGTTTTACCATTGTT----TTAATT--AATGCTTAACCCAA--CCAA-AATG----------------------ACT--AT----AACCTACCACAAAAAAAAAAAACAATATTATCATAA-A--TAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................ATCCCGATAGCCAAAGCATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200020
..................CTAAAGACCTATCCCGATAGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001
.A-TCA-----ATTGTTGCTAAAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.A-TCA-----ATTGTTGCTAAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
AA-TCA-----ATTGTTGCTAAAGACCTAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
............................ATCCCGATAGCCAAAGCATTAAAGAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
....CA-----ATTGTTGCTAAAGACCTATCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
.........................CCTATCCCGATAGCCAAAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001
droVir3
GT--TG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTT----------------------TTTT-TTTTT--TTT------TT-----TGTTT----------CCAT---TC-------GTTTTTTTGACTC-----TACATAATGTTCTACCAT---T----ACTTTT--AATGCTTAACCCAA--CCAA-AA-----------------------TGAC--AT----AA-----------------------------CCC-A-T--AAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
TGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCTT----------------------TGTT-TTTTTTGTCT------ACAA---TGGTT----------ATAA---TG-------GTTTGTTTGATTC-----TACATAATGCTTTACCAT---T----ACTTTT--AATGCTTAACCCAA--CCAA-AA-----------------------TGAC--AT----AA-----------------------------CCC-A-T--AAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTT--TCTTT----------------------CCTT-TTGTTCTTTG------TATT-----TG----------TTTAATA--T-------GTTTACTCGACTC-----AACATAATGTTCTACCAT---T----ACTTTT--AATGCTTAACCCAA--CCAAAAA-----------------------TGAC--AT----AA-----------------------------CCCCA-T--AAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 03:57 AM