dsi_12447

GCATTGAGTAAACGTGGGGGCCCTTTCAACTCTAGCAGGTTCGGGTTAAGAAGGGTCACTGACTCAGAGCAGTTTAGCCTTCCACAATAGCTGCAAGAAAATCTTGCATTTAGCAGCTGCAGGTCCGATAAGAACAAAAGCGATGTAAATATAAGCCAGAATAAGTAACTATAAAATACGTTTATCGTAACGCTTATTAGGTATTTTAGTTTGAGGCAGACACAAGAAAATAATAAATTATCCGTAAAAG *******************************************************************************************************************....(((...(((...(((.......)))...)))..)))............*******************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553486 Makindu_3 day-old ovaries	SRR553488 RT_0-2 hours eggs	SRR553485 Chicharo_3 day-old ovaries	O001 Testis	SRR618934 dsim w501 ovaries	SRR553487 NRT_0-2 hours eggs	GSM343915 embryo
...................................................................................................................................................AATATAAGCCAGAATAAGTAAC.................................................................................	22	0	10	0.30	3	0	0	0	3	0	0	0
.....................................................................................................................TGCAGGTCCGATAAGAACAAAAGCGA...........................................................................................................	26	0	5	0.20	1	0	1	0	0	0	0	0
...........................................................................................................................................................................................................TTTTAGTTTGAGGCAGACACAAGAAAA....................	27	0	5	0.20	1	1	0	0	0	0	0	0
................................................................................................................................TAAGAACAAAAGCGATGTAAATAT..................................................................................................	24	0	5	0.20	1	1	0	0	0	0	0	0
.................................................................................................................................................................TAAGTAACTATAAAATACGTTTATCGT..............................................................	27	0	5	0.20	1	0	1	0	0	0	0	0
..................................GCAGGTTCGGGTCAA.........................................................................................................................................................................................................	15	1	5	0.20	1	0	0	1	0	0	0	0
........................................................................................................TGCATTTAGCAGCTGCAGGTCCGATAAGA.....................................................................................................................	29	0	5	0.20	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................TTATTAGGTATTTTAGTTTGAGACAGA..............................	27	1	5	0.20	1	0	0	0	0	0	1	0
............................GCTCTTGCAGGTTCGGG.............................................................................................................................................................................................................	17	2	7	0.14	1	0	0	0	0	1	0	0
.......................................................................................................................CAGGTCCGAAAAGAAGA..................................................................................................................	17	2	20	0.10	2	0	0	2	0	0	0	0
..................................................................................................................................................................................................TATTTGGTATTCTAGTTGGAG...................................	21	3	15	0.07	1	0	0	0	0	0	0	1
...................................................................................................................................................AATATAAGACAGAATA.......................................................................................	16	1	16	0.06	1	0	0	0	0	1	0	0
...........................AACTCTAACAGGTACTGGT............................................................................................................................................................................................................	19	3	18	0.06	1	0	0	0	0	1	0	0
...................................................................................................................................TAACAAAACCGATGTAAA.....................................................................................................	18	2	18	0.06	1	0	1	0	0	0	0	0

CGTAACTCATTTGCACCCCCGGGAAAGTTGAGATCGTCCAAGCCCAATTCTTCCCAGTGACTGAGTCTCGTCAAATCGGAAGGTGTTATCGACGTTCTTTTAGAACGTAAATCGTCGACGTCCAGGCTATTCTTGTTTTCGCTACATTTATATTCGGTCTTATTCATTGATATTTTATGCAAATAGCATTGCGAATAATCCATAAAATCAAACTCCGTCTGTGTTCTTTTATTATTTAATAGGCATTTTC *******************************************************************************....(((...(((...(((.......)))...)))..)))............*******************************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553487 NRT_0-2 hours eggs	SRR553488 RT_0-2 hours eggs	SRR618934 dsim w501 ovaries	SRR553486 Makindu_3 day-old ovaries	SRR553485 Chicharo_3 day-old ovaries	M024 male body	M053 female body
...........................................................................................................................................................................................AGTGCGAATGATCCATAA.............................................	18	2	6	0.50	3	1	1	0	1	0	0	0
...........................................................................................................................................................................................AGTGCGAATGATCCATAAG............................................	19	3	9	0.22	2	2	0	0	0	0	0	0
................CCACGGGAAGGTTGAGAT........................................................................................................................................................................................................................	18	2	5	0.20	1	0	0	1	0	0	0	0
..............................................................................................................ACCGTCGACGTCCAGGCTATGT......................................................................................................................	22	3	8	0.13	1	0	0	0	0	0	1	0
.................................................................................................................................................................................................................AATCTCCGTCAGTGATCTTTTAT..................	23	3	8	0.13	1	1	0	0	0	0	0	0
...........................................................................................................................................................................................AGTGCGAATGATCCATA..............................................	17	2	10	0.10	1	1	0	0	0	0	0	0
...................................................................TCGTCAAATCGGAAGGTGT....................................................................................................................................................................	19	0	11	0.09	1	0	0	1	0	0	0	0
...............................................................................................ACTTTTAGAACGTAAATCGTCGACGT.................................................................................................................................	26	1	11	0.09	1	0	0	0	0	1	0	0
.........................................................................................................................................................................................TGATTGCGAATGATCCATAA.............................................	20	3	13	0.08	1	0	1	0	0	0	0	0
.............................................................................................................................................................................................TGCGAATGATCCATAA.............................................	16	1	17	0.06	1	1	0	0	0	0	0	0
..........................GTTGTGATCAGCCAAGCC..............................................................................................................................................................................................................	18	3	20	0.05	1	0	1	0	0	0	0	0
...........................................................................................................................................................................................ATTGCGAATGATCCTT...............................................	16	2	20	0.05	1	0	0	0	1	0	0	0
......TCATTTGCACGGCCGG....................................................................................................................................................................................................................................	16	2	20	0.05	1	0	0	0	1	0	0	0
...........................................................................................................................................................................................AGTGCGAATGATCCA................................................	15	2	20	0.05	1	0	1	0	0	0	0	0
.....................................................................................................................................................................................................................................TATTATTTATTAGGCATA...	18	2	20	0.05	1	0	0	0	0	0	0	1
..............................................................................................................................................................................................GCGAATGATCCATAA.............................................	15	1	20	0.05	1	0	0	0	0	1	0	0

Species	Coordinate	ID	Alignment
droSim2	3l:24010875-24011124 +	dsi_12447	GCATTGAGTAAACGTGGGGGCCCTTTCAACTCTAGCAGGTTCGGGTTAA-------GAAGGGTCACTGACTCAGAGCAGTTTAGCCTTCCACAATAGCTGCAAGAAAATCTTGCATTTAGCAGCTGCAGGTCCGATAAGAACAAAAGCGATGTAAATATAAGCCAGAATAAGTAACTATAAAATACGTTTATCGTAACGCTTATTAGGTATT-TTAG---TTTGA------GGCAGACACAA----GAAAATAATAAATTATCCGTAAAAG
droSec2	scaffold_76:62323-62501 +		-----------------------C----------------------------------------------CCAGAGCAGTTTAGCCTTCCACAATAGCTGCAAGAAAATCTTGCATTTAGCAGCTGCAGGTCCGATGAGAACAAAAAGGATGTTAATATAAGCCAGAATAAGTAACTATAAGATAG---------AACGCTTATTAGGTATT-TTAG---TTTGA------GACAGACACAA----GAAGATAATAAATTATCCGTAAAAG
dm3	chr3L:24143449-24143599 -		-----------------------A------------------------A-------GGAAGACTTTTGTCCCAGTTGAGTTCAGCATTCCACAATTGTTGCAAGAAGATCTGGCATATAGCAACTGCAGGTCCAATGAGACCAAGGTGGTCGTAGATATGAGCAATAGT------CGATAAGATAG---------AACGCTTACTAGGTTTT-TTAG---TTTG-----------------------------------------------
droEre2	scaffold_4784:25547049-25547252 -		-----------------------TTGCAACTCTA-------------AA-------GAAAGACTTTCGTCCCAGTTCAGTGTAGCCTTCTACAATTGCTGCAAGAAAATCTTGCATTTAGCAACTGCAGGTCCGATAAGTCCCAGAAAGTCGTAAGTATAAGCAATATT------CGATAAGATAG---------AGCGCTTACTAGGTTTTTTTAG---TTTAA------GGCAGAGACAAAAACGAAAATAATAAATTATCCGTAGATG
droYak3	v2_chr2L_random_010:166965-167136 -		-----------------------C------------------------------------------------AGTTCAGTTCAGCCTTCCACAATTGCTGCAAGAAAATCTTGCAATTAGCAACTGCAGGTACGAAAAGACCAAAAGGGTCGTAAATATGAGCAATATT------CGATAAGATAG---------AACCCTTTCTACGTTTT-AA-A---TTTGA------GGCACACATAAGGACG--AATAATAAATTCTCCGTAGATG
droBia1	scf7180000299726:1038-1092 -		-----------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAGAAT--TTAC---TTTAA------GATAAAAACAA----GAAAACAACAATATATTGACAAAAA
droTak1	scf7180000415315:8459-8637 -		-----------------------A------------------------A-------GAAAGACTCTCATCCCAAGTCAGCTTTGCCTTCCATAGATTCTGCAAAAAAATCTTGCACTTTGCCATTACTGGTCCGATAAGGCCAAGGGGGTTGTATAAATGGGCCACAGT------TGATAGGATGG---------AACGTTTACTGGGTTTT-GTAC---TTTGG------GGTAGCGATAACAATGAAAACAAGAAA-------------
droEle1	scf7180000487787:1982-2165 +		-----------------------A-----------------------AA-------GGTCGACTCTCATCCC-------TTTAGCCTTCCATAAATTGAGCAA-AAAATCTTGCA-CTTGCAATTACCGGTCCGATAAAGCCAAGAGGGTCGTAGAAATGGGCAACATT------TGATAGGATGG---------AACGCTTACTGGGTTTT-GCAC---TTTGT------GGTAGCGATAACAATGAAAATAATAAATTCTCAATAGAGG
droRho1	scf7180000779853:2344-2411 +		-----------------------C-----------------------------------------------------AACTTCGCTCTACAGACTTGTTGCAGGAAAATCTTGGCCTTGGCAACCACAGGACCAATGAGACCAA-------------------------------------------------------------------------------------------------------------------------------
droFic1	scf7180000451740:6312-6398 +		-----------------------C----------------------------------------------CCAGTGTAGCTTCTCCTTCCAGAGCTCCTGTAGGAAGATTTTGGCTTTGGTTATGACCGGGCTTATGAGTCCAAGCGGGTCATAAA-------------------------------------------------------------------------------------------------------------------
droAna3	scaffold_13250:2189831-2189888 +		-----------------------C------------------------------------------------------------------ACAGCTTCTGCAAGAATATTTTTGATTTGGTAGCGACTGGACCAACAAGGCCCAAAG----------------------------------------------------------------------------------------------------------------------------
dp5	Unknown_group_93:5470-5646 +		-----------------------C----------------------------------------------CCAATGAAGCTTTTCTTTCCACAGCTGCTGTAGAAATATTTTTGCTTTAGTAATTACTGACCCTATAAGTCCGAGTGGATCATAAAATCGTGCAATAGT------TGACAATACAA---------TTCGCTTAGTTGGTTTC-GAAGGGACT--TGATTGGGAC-------AGAATGAAAATAATAGCTCATCCGAAGTGG
droPer2	scaffold_1701:1465-1675 -		-----------------------CAAGTTGTG------------CGTAAGGAGACTGGCAGACTTTCATCCCAATGAAGCTTTTCTTTCCACAGCTGCTGTAGAAATATTTTTGCTTTAGTAATAACTGGCCCTATAAGTCCGAGTGGATCATAAAATCGTGCAATAGT------TGACAATACAA---------CTCGCTTAGTTGGTTTC-GAAGGGACT--TGATTGGGAC-------AGAATGAAAATAATAGCTTATCCGAAGTGG
droVir3	scaffold_12958:2466841-2466936 -		-----------------------C----------------------------------------------TCACTCAAGCTTCTCCTTCCAGATCTGCTGCATAAAGATTTTAGCCTTGGCAATTACCGGCCCTATGAGTCCAAGCGGGTCATACAAGCGAGCTA----------------------------------------------------------------------------------------------------------
droMoj3	scaffold_6540:772839-773007 -		-----------------------------------------------------------------------------AGTTTATACCTCCAGAGTTGTTGCAAGAAAATTTTAGCCTTCGTTATTACTGGGCCGACCAGGCCGAGGGGATCATAAAACCGAGCAATAGA------CGAGAGAACAG---------AGCGCCTGGAGGGCTTA-GAGG---CTGAA------TTCAGGGCTAGATATGAGAAAAGAAGTTGATCAGATGCCG
droGri2	scaffold_14940:4150-4315 +		--------------------------------------------------------------------------------TTTGCCTTCCAGAGTTGCTGCAGGAATATTTTGCACCTAGCAATTGCAGGTCCAATAAGACCAAGAGGATCATAGATACACGCAATCGT------GTACAAGATGG---------ATCGCTTGGAGAGTTTT-GAAT---TTGGG------CGAACAGGTGACAACAAAAACAAAAGATTATCCGAAACTG

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

GCATTGAGTAAACGTGGGGGCCCTTTCAACTCTAGCAGGTTCGGGTTAA-------GAAGGGTCACTGACTCAGAGCAGTTTAGCCTTCCACAATAGCTGCAAGAAAATCTTGCATTTAGCAGCTGCAGGTCCGATAAGAACAAAAGCGATGTAAATATAAGCCAGAATAAGTAACTATAAAATACGTTTATCGTAACGCTTATTAGGTATT-TTAG---TTTGA------GGCAGACACAA----GAAAATAATAAATTATCCGTAAAAG	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
..........................................................................................................................................................AATATAAGCCAGAATAAGTAAC...............................................................................................	22	10	0.30	3	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................TGCAGGTCCGATAAGAACAAAAGCGA.........................................................................................................................	26	5	0.20	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
..................................................................................................................................................................................................................TT-TTAG---TTTGA------GGCAGACACAA----GAAAA....................	27	5	0.20	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................TAAGAACAAAAGCGATGTAAATAT................................................................................................................	24	5	0.20	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................TAAGTAACTATAAAATACGTTTATCGT............................................................................	27	5	0.20	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
...............................................................................................................TGCATTTAGCAGCTGCAGGTCCGATAAGA...................................................................................................................................	29	5	0.20	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0

droSec2

-----------------------C----------------------------------------------CCAGAGCAGTTTAGCCTTCCACAATAGCTGCAAGAAAATCTTGCATTTAGCAGCTGCAGGTCCGATGAGAACAAAAAGGATGTTAATATAAGCCAGAATAAGTAACTATAAGATAG---------AACGCTTATTAGGTATT-TTAG---TTTGA------GACAGACACAA----GAAGATAATAAATTATCCGTAAAAG	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
No Reads

dm3

-----------------------A------------------------A-------GGAAGACTTTTGTCCCAGTTGAGTTCAGCATTCCACAATTGTTGCAAGAAGATCTGGCATATAGCAACTGCAGGTCCAATGAGACCAAGGTGGTCGTAGATATGAGCAATAGT------CGATAAGATAG---------AACGCTTACTAGGTTTT-TTAG---TTTG-----------------------------------------------	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
....................................................................TCCCAGTTGAGTTCAGCATTCCAC...................................................................................................................................................................................	24	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................TCGTAGATATGAGCAATAGT------CGATAAGA........................................................................................	28	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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............................................................................................................................TGCAGGTCCAATGAGACCAAGGTGG..........................................................................................................................	25	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TAGATATGAGCAATAGT------CGATAAGA........................................................................................	25	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
............................................................................................................................TGCAGGTCCAATGAGACCAAGGTG...........................................................................................................................	24	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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..............................................................................................................................................................TGAGCAATAGT------CGATAAGATAG---------AACGCT......................................................................	28	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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...............................................................................................TGTTGCAAGAAGATCTGGCATATAGCAAC...................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................AGT------CGATAAGATAG---------AACGCTTACTA.................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................GATATGAGCAATAGT------CGATAAGA........................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................AAGAAGATCTGGCATATAGCA.....................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................GATATGAGCAATAGT------CGATAAGATA......................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................AATAGT------CGATAAGATAG---------AACGC.......................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................GATATGAGCAATAGT------CGATAAGATAG---------AA..........................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................CAGGTCCAATGAGACCAAGGTGGTCG.......................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................TTTGTCCCAGTTGAGTTCAGCATTC......................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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...................................................................................................GCAAGAAGATCTGGCATATAGCAAC...................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................TGAGCAATAGT------CGATAAGATAG---------AAC.........................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................TTTTGTCCCAGTTGAGTTCAGCA.........................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................TCCAATGAGACCAAGGTGGTCGTAGATA.................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................TGCAAGAAGATCTGGCATATAGC......................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..................................................................................................................................................................................TAAGATAG---------AACGCTTACTAGGTTTT-TT........................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................TTCCACAATTGTTGCAAGAAGATC.................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................GAGCAATAGT------CGATAAGATAG---------AACGCT......................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................GACCAAGGTGGTCGTACCC..................................................................................................................	19	8	0.13	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

-----------------------TTGCAACTCTA-------------AA-------GAAAGACTTTCGTCCCAGTTCAGTGTAGCCTTCTACAATTGCTGCAAGAAAATCTTGCATTTAGCAACTGCAGGTCCGATAAGTCCCAGAAAGTCGTAAGTATAAGCAATATT------CGATAAGATAG---------AGCGCTTACTAGGTTTTTTTAG---TTTAA------GGCAGAGACAAAAACGAAAATAATAAATTATCCGTAGATG	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

droYak3

-----------------------C------------------------------------------------AGTTCAGTTCAGCCTTCCACAATTGCTGCAAGAAAATCTTGCAATTAGCAACTGCAGGTACGAAAAGACCAAAAGGGTCGTAAATATGAGCAATATT------CGATAAGATAG---------AACCCTTTCTACGTTTT-AA-A---TTTGA------GGCACACATAAGGACG--AATAATAAATTCTCCGTAGATG

Size

Hit Count

Total Norm

Total

M026
Head

M043
Female-body

M056
Embryo

V046
Embryo

V052
Head

V058
Head

V120
Male-body

SRR1275488
Male larvae

SRR1275486
Male prepupae

SRR1275484
Male prepupae

GSM1528802
follicle cells

No Reads

droBia1

-----------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAGAAT--TTAC---TTTAA------GATAAAAACAA----GAAAACAACAATATATTGACAAAAA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

-----------------------A------------------------A-------GAAAGACTCTCATCCCAAGTCAGCTTTGCCTTCCATAGATTCTGCAAAAAAATCTTGCACTTTGCCATTACTGGTCCGATAAGGCCAAGGGGGTTGTATAAATGGGCCACAGT------TGATAGGATGG---------AACGTTTACTGGGTTTT-GTAC---TTTGG------GGTAGCGATAACAATGAAAACAAGAAA-------------	Size	Hit Count	Total Norm	Total
No Reads

droEle1

-----------------------A-----------------------AA-------GGTCGACTCTCATCCC-------TTTAGCCTTCCATAAATTGAGCAA-AAAATCTTGCA-CTTGCAATTACCGGTCCGATAAAGCCAAGAGGGTCGTAGAAATGGGCAACATT------TGATAGGATGG---------AACGCTTACTGGGTTTT-GCAC---TTTGT------GGTAGCGATAACAATGAAAATAATAAATTCTCAATAGAGG	Size	Hit Count	Total Norm	Total
No Reads

droRho1

-----------------------C-----------------------------------------------------AACTTCGCTCTACAGACTTGTTGCAGGAAAATCTTGGCCTTGGCAACCACAGGACCAATGAGACCAA-------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droFic1

-----------------------C----------------------------------------------CCAGTGTAGCTTCTCCTTCCAGAGCTCCTGTAGGAAGATTTTGGCTTTGGTTATGACCGGGCTTATGAGTCCAAGCGGGTCATAAA-------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droAna3

-----------------------C------------------------------------------------------------------ACAGCTTCTGCAAGAATATTTTTGATTTGGTAGCGACTGGACCAACAAGGCCCAAAG----------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
No Reads

dp5

-----------------------C----------------------------------------------CCAATGAAGCTTTTCTTTCCACAGCTGCTGTAGAAATATTTTTGCTTTAGTAATTACTGACCCTATAAGTCCGAGTGGATCATAAAATCGTGCAATAGT------TGACAATACAA---------TTCGCTTAGTTGGTTTC-GAAGGGACT--TGATTGGGAC-------AGAATGAAAATAATAGCTCATCCGAAGTGG	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AGAATG........................	23	9	20.00	180	0	102	0	0	0	0	2	47	29	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AGAAT.........................	22	9	16.22	146	1	77	1	0	0	0	8	52	7	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AGAATGA.......................	24	9	15.56	140	0	53	0	0	0	0	2	51	34	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AGAATGAA......................	25	9	6.22	56	0	19	0	0	0	0	1	15	21	0
..................................................................................................TGTAGAAATATTTTTGCTTTAGTAA....................................................................................................................................................	25	1	6.00	6	0	6	0	0	0	0	0	0	0	0
..................................................................................................TGTAGAAATATTTTTGCTTTAGTA.....................................................................................................................................................	24	1	6.00	6	0	2	0	0	0	0	0	4	0	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AGAA..........................	21	9	5.33	48	0	23	0	0	1	0	1	17	6	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AGAATGAAAA....................	27	9	3.11	28	0	19	0	0	0	0	4	2	3	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AGA...........................	20	9	3.11	28	0	19	0	0	0	0	0	6	3	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AGAAA.........................	22	9	3.00	27	0	13	0	0	0	0	0	13	1	0
..................................................................................................TGTAGAAATATTTTTGCTTTAGT......................................................................................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	3	0	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AGAATGAAA.....................	26	9	2.89	26	0	11	0	0	0	0	2	7	6	0
.................................................................................................................................................TGGATCATAAAATCGTGCAATAGT------TG..............................................................................................	26	6	2.00	12	0	12	0	0	0	0	0	0	0	0
.................................................................................................................................................TGGATCATAAAATCGTGCAATAGT------................................................................................................	24	6	1.83	11	0	9	0	0	0	0	0	1	1	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AGAATA........................	23	9	1.78	16	0	8	0	0	0	0	0	8	0	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AG............................	19	9	1.67	15	0	12	0	0	0	0	0	2	1	0
.................................................................................................................................................TGGATCATAAAATCGTGCAATAGT------TGA.............................................................................................	27	6	1.50	9	0	5	0	0	0	1	0	0	3	0
.................................................................................................................................................TGGATCATAAAATCGTGCAATAG.......................................................................................................	23	6	1.50	9	0	6	0	0	0	0	0	3	0	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AGAAAA........................	23	9	1.33	12	0	12	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................TGATTGGGAC-------AGAATGAAAATAATAGC.............	27	6	1.33	8	0	0	0	0	0	0	0	3	5	0
........................................................................................................................................................................................................................GGGACT--TGATTGGGAC-------AGAATG........................	22	9	1.22	11	0	11	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................GGACT--TGATTGGGAC-------AGAATGAAAA....................	25	9	1.22	11	0	11	0	0	0	0	0	0	0	0
..............................................................................................CTGCTGTAGAAATATTTTTGCTTTAG.......................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................TAGT------TGACAATACAA---------TTCGCTTAGT..................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................GTAGAAATATTTTTGCTTTAGT......................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................GGACT--TGATTGGGAC-------AGAATGAAA.....................	24	9	0.89	8	0	8	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AGAATC........................	23	9	0.89	8	0	0	0	0	0	0	0	0	8	0
..........................................................................TGAAGCTTTTCTTTCCACAGCTGCTG...........................................................................................................................................................................	26	6	0.83	5	0	5	0	0	0	0	0	0	0	0
..........................................................................TGAAGCTTTTCTTTCCACAGCTG..............................................................................................................................................................................	23	6	0.67	4	0	4	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................GGACT--TGATTGGGAC-------AGAATGAA......................	23	9	0.67	6	0	5	0	0	0	0	0	1	0	0
........................................................................................................................................................................................................................GGGACT--TGATTGGGAC-------AGAATGAAA.....................	25	9	0.67	6	0	4	0	0	0	0	0	2	0	0
..........................................................................TGAAGCTTTTCTTTCCACAGCTGC.............................................................................................................................................................................	24	6	0.67	4	0	4	0	0	0	0	0	0	0	0
................................................................................................................................................GTGGATCATAAAATCGTGCAATAGT------TG..............................................................................................	27	6	0.67	4	0	4	0	0	0	0	0	0	0	0
.................................................................................TTTCTTTCCACAGCTGCTGTAGA.......................................................................................................................................................................	23	6	0.67	4	0	4	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................TGGTTTC-GAAGGGACT--TGATTGG........................................	23	8	0.63	5	0	5	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................TGAAAATAATAGCTCATCCGAAG...	23	5	0.60	3	0	3	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................TGGGAC-------AGAATGAAAATAATAGCTCATC........	28	6	0.50	3	0	2	0	0	0	0	0	0	1	0
..............................................................................................................................................GAGTGGATCATAAAATCGTGCAATAG.......................................................................................................	26	6	0.50	3	0	0	0	0	0	0	0	2	1	0
.......................................................................................................................................TAAGTCCGAGTGGATCATAAAATCG...............................................................................................................	25	6	0.50	3	0	3	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................TGGGAC-------AGAATGAAAATAATAGC.............	23	6	0.50	3	0	2	0	0	0	0	0	1	0	0
.................................................................................................................................................TGGATCATAAAATCGTGCA...........................................................................................................	19	6	0.50	3	0	3	0	0	0	0	0	0	0	0
.................................................................................TTTCTTTCCACAGCTGCTGTAGAAA.....................................................................................................................................................................	25	6	0.50	3	0	2	0	0	0	0	0	0	1	0
........................................................................................................................................................................................................................GGGACT--TGATTGGGAC-------AGAAT.........................	21	9	0.44	4	0	4	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................GGGACT--TGATTGGGAC-------AGAATGA.......................	23	9	0.44	4	0	3	0	0	0	0	0	0	1	0
..........................................................................................................................................................................................................................GACT--TGATTGGGAC-------AGAATGAAAA....................	24	9	0.44	4	0	4	0	0	0	0	0	0	0	0
...................................................................................................................................................GATCATAAAATCGTGCAATAGT------TGACAA..........................................................................................	28	6	0.33	2	0	0	0	0	0	0	0	0	2	0
.................................................................................................................................................TGGATCATAAAATCGTGCAATAGT------T...............................................................................................	25	6	0.33	2	0	2	0	0	0	0	0	0	0	0
..................................................................................TTCTTTCCACAGCTGCTGTAGAAA.....................................................................................................................................................................	24	6	0.33	2	0	2	0	0	0	0	0	0	0	0
...................................................................................................................................................GATCATAAAATCGTGCAATAGT------TG..............................................................................................	24	6	0.33	2	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................GGACT--TGATTGGGAC-------AGAATGA.......................	22	9	0.33	3	0	3	0	0	0	0	0	0	0	0
.....................................................................................TTTCCACAGCTGCTGTAGA.......................................................................................................................................................................	19	6	0.33	2	0	0	0	0	0	0	0	2	0	0
........................................................................................................................................................................................................................GGGACT--TGATTGGGAC-------AGAATGAAAA....................	26	9	0.33	3	0	3	0	0	0	0	0	0	0	0
..............................................................................................................................................GAGTGGATCATAAAATCGTGCAA..........................................................................................................	23	6	0.33	2	0	2	0	0	0	0	0	0	0	0
................................................................................................................................................GTGGATCATAAAATCGTGCAATAGT------................................................................................................	25	6	0.33	2	0	1	0	0	1	0	0	0	0	0
........................................................................................................................................................................................................................GGGACT--TGATTGGGAC-------AGAA..........................	20	9	0.33	3	0	1	0	0	0	0	0	2	0	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AGAATT........................	23	9	0.33	3	0	2	0	0	0	0	0	1	0	0
............................................................................................AGCTGCTGTAGAAATATTTTTGC............................................................................................................................................................	23	7	0.29	2	0	1	0	0	0	0	0	1	0	0
...................................................................................................................................................................................................................C-GAAGGGACT--TGATTGGGAC-------..............................	20	8	0.25	2	0	0	0	0	0	0	0	0	2	0
.............................................................................................................................................................................................................TGGTTTC-GAAGGGACT--TGATA..........................................	21	8	0.25	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AA............................	19	9	0.22	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AGAATGAAAAA...................	28	9	0.22	2	0	0	0	0	0	0	0	0	2	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AGTT..........................	21	9	0.22	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------..............................	17	9	0.22	2	0	0	0	0	0	0	0	1	1	0
.........................................................................................................................................................................................................................GGACT--TGATTGGGAC-------AGAATG........................	21	9	0.22	2	0	2	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................TAATAGCTCATCCGAAGTGG	20	5	0.20	1	0	1	0	0	0	0	0	0	0	0
........................................................................AATGAAGCTTTTCTTTCCACAG.................................................................................................................................................................................	22	5	0.20	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................TAATAGCTCATCCGAAGTG.	19	5	0.20	1	0	1	0	0	0	0	0	0	0	0
........................................................................AATGAAGCTTTTCTTTCCACAGC................................................................................................................................................................................	23	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................TGAAAATAATAGCTCATCCGAAGTGG	26	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................TGGATCATAAAATCGTGCAATAGT------TT..............................................................................................	26	6	0.17	1	0	0	0	0	0	0	0	1	0	0
..........................................................................TGAAGCTTTTCTTTCCACAGCT...............................................................................................................................................................................	22	6	0.17	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................TGGGAC-------AGAATGAAAATAATAGCTC...........	25	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................CGAGTGGATCATAAAATCGTG.............................................................................................................	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................GACT--TGATTGGGAC-------AGAATGAAAATAA.................	27	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................ACAGCTGCTGTAGAAATATT.................................................................................................................................................................	20	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................GAGTGGATCATAAAATCGTGC............................................................................................................	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..........................................................................TGAAGCTTTTCTTTCCACAGC................................................................................................................................................................................	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................GAC-------AGAATGAAAATAATAGCTCATCC.......	26	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................TGGATCATAAAATCGTGCAAT.........................................................................................................	21	6	0.17	1	0	0	0	0	0	0	0	1	0	0
.................................................................................TTTCTTTCCACAGCTGCTGTAGAA......................................................................................................................................................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................GAGTGGATCATAAAATCGTGCAATAGT------................................................................................................	27	6	0.17	1	0	0	0	0	0	0	1	0	0	0
........................................................................................................................................AAGTCCGAGTGGATCATAAAATCG...............................................................................................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................TGGGAC-------AGAATGAAAATAATAGCTCATCC.......	29	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................TCCACAGCTGCTGTAGAAATATTT................................................................................................................................................................	24	6	0.17	1	0	0	0	0	0	0	0	0	1	0
.....................................................................................TTTCCACAGCTGCTGTAGAAATATT.................................................................................................................................................................	25	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................GATTGGGAC-------AGAATGAAAATAATAGC.............	26	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................GGATCATAAAATCGTGCA...........................................................................................................	18	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................TCCGAGTGGATCATAAAAT.................................................................................................................	19	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................TTGGGAC-------AGAATGAAAATAATAGC.............	24	6	0.17	1	0	0	0	0	0	0	0	0	1	0
..................................................................................TTCTTTCCACAGCTGCTGTAGA.......................................................................................................................................................................	22	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................TAAGTCCGAGTGGATCATAAAAT.................................................................................................................	23	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................TTGGGAC-------AGAATGAAAATAATAGCTCATC........	29	6	0.17	1	0	0	1	0	0	0	0	0	0	0
..........................................................................TGAAGCTTTTCTTTCCACAGCTGCT............................................................................................................................................................................	25	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................GATCATAAAATCGTGCAATAGT------TGA.............................................................................................	25	6	0.17	1	0	0	0	0	0	0	0	1	0	0
...................................................................................................................................................................................................................................TTGGGAC-------AGAATGAAAATAAT................	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................GGATCATAAAATCGTGCAATAGT------TG..............................................................................................	25	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................TGCTGTAGAAATATTTTT..............................................................................................................................................................	18	7	0.14	1	0	0	0	0	0	0	0	0	1	0
.................................................................................................................................................TGGATCATAAAATCGTGCAATAGA------AA..............................................................................................	26	7	0.14	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................TCGCTTAGTTGGTTTC-GAAGGA....................................................	22	7	0.14	1	0	0	0	0	0	0	0	0	1	0
.............................................................................................................................................................................................................TGGTTTC-GAAGGGACT--TGATTGGG.......................................	24	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................TGGTTTC-GAAGGGACT--TGATTGGGA......................................	25	8	0.13	1	0	1	0	0	0	0	0	0	0	0
................................................................................TTTTCTTTCCACAGCTGCTGTA.........................................................................................................................................................................	22	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TAGTTGGTTTC-GAAGGGACT--...............................................	20	8	0.13	1	0	0	0	0	0	0	0	0	1	0
..................................................................................................................................................................................................................TC-GAAGGGACT--TGATTGGG.......................................	19	8	0.13	1	0	0	0	0	0	0	0	0	1	0
.........................................................................................................................................................................................................TAGTTGGTTTC-GAAGGGACT--A..............................................	21	8	0.13	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................GGTTTC-GAAGGGACT--TGATTGG........................................	22	8	0.13	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................TTTC-GAAGGGACT--TGATTGGG.......................................	21	8	0.13	1	0	0	0	0	0	1	0	0	0	0
.........................................................................................................................................................................................................TAGTTGGTTTC-GAAGGGACT--TGA............................................	23	8	0.13	1	0	0	0	0	0	0	0	0	1	0
............................................................................................................................................................................................................TTGGTTTC-GAAGGGACT--TGATTGGG.......................................	25	8	0.13	1	0	0	1	0	0	0	0	0	0	0
..................................................................................................................................................................................................................TC-GAAGGGACT--TGATTGGGAC-------AGAA..........................	25	8	0.13	1	0	0	1	0	0	0	0	0	0	0
...............................................................................................................................................................................................................GTTTC-GAAGGGACT--TGATTGGGAC-------..............................	24	8	0.13	1	0	0	0	0	0	0	1	0	0	0
................................................................................................................................................................................................................TTTC-GAAGGGACT--TGATTGGGA......................................	22	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TAGTTGGTTTC-GAAGGGACT--TGAT...........................................	24	8	0.13	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................TC-GAAGGGACT--TGATTGGGAC-------AGA...........................	24	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................TGGTTTC-GAAGGGACT--TGATTGGGAC-------..............................	26	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................TGGTTTC-GAAGGGACT--TGATTG.........................................	22	8	0.13	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................C-GAAGGGACT--TGATTGGG.......................................	18	8	0.13	1	0	0	0	0	0	0	0	0	1	0
..................................................................................................................................................................................................................TC-GAAGGGACT--TGATTGGGAC-------..............................	21	8	0.13	1	0	0	0	0	0	0	0	0	0	1
.............................................................................................................................................................................................................TGGTTTC-GAAGGGACT--TGATTGGGAC-------A.............................	27	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................GAAGGGACT--TGATTGGGAC-------..............................	19	8	0.13	1	0	0	0	0	0	0	0	0	1	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------A.............................	18	9	0.11	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................ACT--TGATTGGGAC-------AGAATGAA......................	21	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AGAATGT.......................	24	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AGAATCC.......................	24	9	0.11	1	0	0	0	0	0	0	0	0	1	0
........................................................................................................................................................................................................................GGGACT--TGATTGGGAC-------AG............................	18	9	0.11	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................GACT--TGATTGGGAC-------AGAAT.........................	19	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AGAATGAAAAT...................	28	9	0.11	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................GGGACT--TGATTGGGAC-------AGAAAA........................	22	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................GGACT--TGATTGGGAC-------AGAAT.........................	20	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................T--TGATTGGGAC-------AGAATGAAA.....................	20	9	0.11	1	0	0	0	0	0	0	1	0	0	0
........................................................................................................................................................................................................................GGGACT--TGATTGGGAC-------AGA...........................	19	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AGT...........................	20	9	0.11	1	0	0	0	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................GGACT--TGATTGGGAC-------AGA...........................	18	9	0.11	1	0	1	0	0	0	0	0	0	0	0

droPer2

-----------------------CAAGTTGTG------------CGTAAGGAGACTGGCAGACTTTCATCCCAATGAAGCTTTTCTTTCCACAGCTGCTGTAGAAATATTTTTGCTTTAGTAATAACTGGCCCTATAAGTCCGAGTGGATCATAAAATCGTGCAATAGT------TGACAATACAA---------CTCGCTTAGTTGGTTTC-GAAGGGACT--TGATTGGGAC-------AGAATGAAAATAATAGCTTATCCGAAGTGG	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.......................CAAGTTGTG------------CGTAAGGAGACTGG.....................................................................................................................................................................................................................	23	20	0.55	11	0	11	0	0	0	0
........................................................................................................................................................................................................................GGGACT--TGATTGGGAC-------AGAATGA.......................	23	20	0.10	2	0	2	0	0	0	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AGAATGAAAA....................	27	20	0.10	2	0	0	0	0	0	2
..........................................................................................................................................................................................................................GACT--TGATTGGGAC-------AGAATGAAA.....................	23	20	0.10	2	2	0	0	0	0	0
.......................................................................................................................................................................................................................AGGGACT--TGATTGGGAC-------AGAATGA.......................	24	20	0.10	2	0	2	0	0	0	0
..............................TG------------CGTAAGGAGACTGGCAGACTTT.............................................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0
........................AAGTTGTG------------CGTAAGGAGACTGG.....................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0
.................................................................................................................................................................................ACAATACAA---------CTCGCTTAGTTGGT..............................................................	23	20	0.05	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................GAAGGGACT--TGATTGGGAC-------AGAAT.........................	24	20	0.05	1	0	0	0	0	0	1
.......................CAAGTTGTG------------CGTAAGGAGA.........................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	1
........................................................................................................................................................................................................................GGGACT--TGATTGGGAC-------AGAATGAG......................	24	20	0.05	1	0	1	0	0	0	0
.................................................................................................................................................TGGATCATAAAATCGTGCAATAGT------TG..............................................................................................	26	20	0.05	1	0	1	0	0	0	0
..................................................................................TTCTTTCCACAGCTGCTGTAG........................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0
...........................................................................................................................................................................................................GTTGGTTTC-GAAGGGACT--TGA............................................	21	20	0.05	1	0	0	0	0	0	1

droVir3

-----------------------C----------------------------------------------TCACTCAAGCTTCTCCTTCCAGATCTGCTGCATAAAGATTTTAGCCTTGGCAATTACCGGCCCTATGAGTCCAAGCGGGTCATACAAGCGAGCTA----------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
................................................................................................GCTGCATAAAGATTTTAGCCTTG........................................................................................................................................................	23	20	2.70	54	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	54	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................CCAGATCTGCTGCATAAAGATTTTAGCC...........................................................................................................................................................	28	20	1.65	33	0	0	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................CCAGATCTGCTGCATAAAGATTTTAGC............................................................................................................................................................	27	20	1.25	25	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	20	0	0	1	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GCTGCATAAAGATTTTAGCCTTGG.......................................................................................................................................................	24	20	1.05	21	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	16	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................CCAGATCTGCTGCATAAAGATTT................................................................................................................................................................	23	20	1.05	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	20	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................CCAGATCTGCTGCATAAAGATTTTAGCCT..........................................................................................................................................................	29	20	0.80	16	0	0	12	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GCTGCATAAAGATTTTAGCCTTGGCAAT...................................................................................................................................................	28	20	0.80	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................CCAGATCTGCTGCATAAAGATTTTA..............................................................................................................................................................	25	20	0.65	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GCTGCATAAAGATTTTAGCCTTGGC......................................................................................................................................................	25	20	0.65	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................CCAGATCTGCTGCATAAAGATTTT...............................................................................................................................................................	24	20	0.50	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................TCCAGATCTGCTGCATAAAGATTT................................................................................................................................................................	24	20	0.30	6	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GCTGCATAAAGATTTTAGCCTTGGCAA....................................................................................................................................................	27	20	0.25	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GCTGCATAAAGATTTTAGCCTTGT.......................................................................................................................................................	24	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................TCCAGATCTGCTGCATAAAGATTTTAGC............................................................................................................................................................	28	20	0.20	4	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................TTCCAGATCTGCTGCATAAAGATTT................................................................................................................................................................	25	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GCTGCATAAAGATTTTAGCCTTT........................................................................................................................................................	23	20	0.15	3	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................CCAGATCTGCTGCATAAAGATTTTT..............................................................................................................................................................	25	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GCTGCATAAAGATTTTAGCCTTTT.......................................................................................................................................................	24	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GCTGCATAAAGATTTTAGCCTT.........................................................................................................................................................	22	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................TACCGGCCCTATGAGTCCAAGCGGGT.........................................................................................................................	26	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................TACCGGCCCTATGAGTCCAAGCGG...........................................................................................................................	24	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GCTGCATAAAGATTTTAGCCT..........................................................................................................................................................	21	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................TTCTCCTTCCAGATCTGCTGCATAAAGAT..................................................................................................................................................................	29	20	0.10	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................CAAGCTTCTCCTTCCAGATCTGC.............................................................................................................................................................................	23	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GCTGCATAAAGATTTTAGCCTTA........................................................................................................................................................	23	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................CCAGATCTGCTGCATAAAGATTTTCC.............................................................................................................................................................	26	20	0.10	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................TCCTTCCAGATCTGCTGCATAAAG....................................................................................................................................................................	24	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................TCAAGCTTCTCCTTCCAGATCTG..............................................................................................................................................................................	23	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................TATGAGTCCAAGCGGGTCATA.....................................................................................................................	21	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................TGCTGCATAAAGATTTTAGCCTT.........................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GCTGCATAAAGATTTTAGCCTTGGCAT....................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................TGCTGCATAAAGATTTTAGCCTTGG.......................................................................................................................................................	25	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................CTGCATAAAGATTTTAGCCTTGGCAAT...................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................TCCAAGCGGGTCATACAAGCG...............................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................GATCTGCTGCATAAAGATTTTAGCCTT.........................................................................................................................................................	27	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GCTGCATAAAGATTTTAGCCTTAT.......................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................GCAATTACCGGCCCTATGAG....................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................CCAGATCTGCTGCATAAAGATTTTAG.............................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TTACCGGCCCTATGAGTCCAAGCGGG..........................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................CTCAAGCTTCTCCTTCCAGATCTGC.............................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................AGCGGGTCATACAAGCGAGC............................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................CTTCCAGATCTGCTGCATAAAGATTTTC..............................................................................................................................................................	28	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................TACCGGCCCTATGAGTCCAAGCGGG..........................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................TCTCCTTCCAGATCTGCTGCAT........................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GCTGCATAAAGATTTTAGCCTTGGCTT....................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GCTGCATAAAGATTTTAGCCTTGGCAATT..................................................................................................................................................	29	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................TCAAGCTTCTCCTTCCAGATC................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................TGCTGCATAAAGATTTTAGCCTTGGCA.....................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................CCAGATCTGCTGCATAAAGATTTTGT.............................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................TCCAGATCTGCTGCATAAAGATTTTA..............................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GCTGCATAAAGATTTTAGCCTTTTT......................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................TCCAGATCTGCTGCATAAAGATT.................................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................ATCTGCTGCATAAAGATTTTAGCC...........................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GCTGCATAAAGATTTTAGCCTTGTAT.....................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GCTGCATAAAGATTTTAGCCTTGGT......................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................ACTCAAGCTTCTCCTTCCAGATCTGC.............................................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................GTCCAAGCGGGTCATACAAGCGA..............................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................TCAAGCTTCTCCTTCCAGATCTGCTGC..........................................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................GATCTGCTGCATAAAGATTT................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................TTCCAGATCTGCTGCATAAAG....................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................CAGATCTGCTGCATAAAGATTTTAGCC...........................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.......................................................................................TCCAGATCTGCTGCATAAAGA...................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................CCAGATCTGCTGCATAAAGATTC................................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................CCAGATCTGCTGCATAAAGATTTTATG............................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................TCCTTCCAGATCTGCTGCATAAAGATTT................................................................................................................................................................	28	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GCTGCATAAAGATTTTAGCCTTGGCAC....................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GCTGCATAAAGATTTTAGCCTTGTT......................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................TAAAGATTTTAGCCTTGGCAATTACCG..............................................................................................................................................	27	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

-----------------------------------------------------------------------------AGTTTATACCTCCAGAGTTGTTGCAAGAAAATTTTAGCCTTCGTTATTACTGGGCCGACCAGGCCGAGGGGATCATAAAACCGAGCAATAGA------CGAGAGAACAG---------AGCGCCTGGAGGGCTTA-GAGG---CTGAA------TTCAGGGCTAGATATGAGAAAAGAAGTTGATCAGATGCCG	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.....................................................................................................................................................................TAGA------CGAGAGAACAG---------AGCGCCTGGAG.................................................................	26	20	22.90	458	457	1	0	0	0	0
..................................................................................................................................................................CAATAGA------CGAGAGAACAG---------AGCGCC......................................................................	24	20	4.20	84	0	0	0	0	84	0
.....................................................................................................................................................................TAGA------CGAGAGAACAG---------AGCGCCTGGAGGG...............................................................	28	20	1.65	33	32	0	0	0	0	1
..................................................................................................................................................................CAATAGA------CGAGAGAACAG---------AGCGCCT.....................................................................	25	20	1.10	22	0	0	0	0	22	0
......................................................................................................................................................................AGA------CGAGAGAACAG---------AGCGCCTGGA..................................................................	24	20	0.80	16	16	0	0	0	0	0
....................................................................................................................................................................................................................................................ATGAGAAAAGAAGTTGATCAGATG...	24	20	0.70	14	14	0	0	0	0	0
..................................................................................................................................................................CAATAGA------CGAGAGAACAG---------AGCGCCTG....................................................................	26	20	0.45	9	9	0	0	0	0	0
...............................................................................................................................TGGGCCGACCAGGCCGAGGGGATCA.......................................................................................................................	25	20	0.35	7	7	0	0	0	0	0
..................................................................................................TGCAAGAAAATTTTAGCCTTCGTTA....................................................................................................................................................	25	13	0.31	4	4	0	0	0	0	0
..................................................................................................................................................................CAATAGA------CGAGAGAACAG---------AGC.........................................................................	21	20	0.30	6	0	0	0	0	6	0
...............................................................................................................................TGGGCCGACCAGGCCGAGGGGATC........................................................................................................................	24	20	0.30	6	6	0	0	0	0	0
.....................................................................................................................................................................TAGA------CGAGAGAACAG---------AGCGCCTGGAA.................................................................	26	20	0.25	5	2	0	0	0	3	0
.....................................................................................................................................................................TAGA------CGAGAGAACAG---------AGCGCCTGGAC.................................................................	26	20	0.25	5	0	0	0	0	5	0
..................................................................................................TGCAAGAAAATTTTAGCCTTCGTTAT...................................................................................................................................................	26	13	0.15	2	2	0	0	0	0	0
...................................................................................................................................................................................................................................................TATGAGAAAAGAAGTTGATCAGATGC..	26	20	0.15	3	0	0	0	0	3	0
.................................................................................................................................................................................................................TTA-GAGG---CTGAA------TTCAGGG.................................	19	20	0.15	3	3	0	0	0	0	0
.....................................................................................................................................................................TAGA------CGAGAGAACAG---------AGC.........................................................................	18	20	0.15	3	3	0	0	0	0	0
.......................................................................................................................................................................GA------CGAGAGAACAG---------AGCGCCTGGAGGG...............................................................	26	20	0.15	3	0	0	0	0	3	0
.................................................................................................................................................................................................................................................GATATGAGAAAAGAAGTTGATCAGATGC..	28	20	0.15	3	0	0	0	0	3	0
.....................................................................................................................................................................TAGA------CGAGAGAACAG---------AGCGCCTG....................................................................	23	20	0.15	3	0	0	0	0	0	3
.................................................................................................................................................................................................................TTA-GAGG---CTGAA------TTCAGGGCTAGATA..........................	26	20	0.10	2	2	0	0	0	0	0
......................................................................................................................................................................................................................AGG---CTGAA------TTCAGGGCTA..............................	18	20	0.10	2	2	0	0	0	0	0
............................................................................................................................TACTGGGCCGACCAGGCCGAGGGG...........................................................................................................................	24	20	0.10	2	2	0	0	0	0	0
................................................................................................GTTGCAAGAAAATTTTAGCCTTCGTTA....................................................................................................................................................	27	13	0.08	1	1	0	0	0	0	0
......................................................................................................AGAAAATTTTAGCCTTCGTT.....................................................................................................................................................	20	16	0.06	1	1	0	0	0	0	0
..................................................................................................................................................................................GAGAACAG---------AGCGCCTGGAGGGC..............................................................	22	20	0.05	1	0	0	0	0	1	0
..................................................................................................................................................................................................................................................ATATGAGAAAAGAAGTTGATCAGATC...	26	20	0.05	1	1	0	0	0	0	0
...................................................................................................................................................................AATAGA------CGAGAGAACAG---------AGCGCCTGG...................................................................	26	20	0.05	1	0	0	0	0	1	0
......................................................................................................................................................................AGA------CGAGAGAACAG---------AGCGCCTGGAGGG...............................................................	27	20	0.05	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................AGAAGTTGATCAGATGCC.	18	20	0.05	1	0	0	0	0	1	0
.................................................................................................................................................................................................................TTA-GAGG---CTGAA------TTCAGGGCTAG.............................	23	20	0.05	1	1	0	0	0	0	0
............................................................................................................................TACTGGGCCGACCAGGCCGAGG.............................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................GATATGAGAAAAGAAGTT............	18	20	0.05	1	1	0	0	0	0	0
................................................................................................................................................................................GAGAGAACAG---------AGCGCCTGGAGGGC..............................................................	24	20	0.05	1	0	0	0	0	1	0
......................................................................................................................................................................AGA------CGAGAGAACAG---------AGCGCCT.....................................................................	21	20	0.05	1	0	0	0	1	0	0
.....................................................................................................................................................................TAGA------CGAGAGAACAG---------AGCGCCTGGC..................................................................	25	20	0.05	1	1	0	0	0	0	0
...................................................................................................................................................................AATAGA------CGAGAGAACAG---------AGCGCCT.....................................................................	24	20	0.05	1	0	0	0	0	1	0
.......................................................................................................................................................................................................................................TTCAGGGCTAGATATGAGAAAAGAAG..............	26	20	0.05	1	1	0	0	0	0	0
...............................................................................................................................TGGGCCGACCAGGCCGAGGGGATCATAA....................................................................................................................	28	20	0.05	1	0	0	0	0	0	1
......................................................................................................................................................................................................GCCTGGAGGGCTTA-GAGG---CTG................................................	21	20	0.05	1	0	0	0	0	0	1
...........................................................................................................................................................................................................GAGGGCTTA-GAGG---CTGAA------TTCAGGGC................................	26	20	0.05	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................AAAGAAGTTGATCAGATGCCG	21	20	0.05	1	1	0	0	0	0	0
.....................................................................................................................................................................TAGA------CGAGAGAACAG---------AGCGCCTGA...................................................................	24	20	0.05	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................TGAGAAAAGAAGTTGATCAG......	20	20	0.05	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................CAGGGCTAGATATGAGAAAAG.................	21	20	0.05	1	0	0	0	1	0	0
.................................................................................................................................................................................................................................................GATATGAGAAAAGAAGTTGATCAGAT....	26	20	0.05	1	0	0	0	0	1	0
...................................................................................................................................................................AATAGA------CGAGAGAACAG---------AGCGCCG.....................................................................	24	20	0.05	1	0	0	0	0	1	0
.................................................................................................................................................................................................................................................GATATGAGAAAAGAAGTTGATCAGATG...	27	20	0.05	1	0	1	0	0	0	0
.....................................................................................................................................................................TAGA------CGAGAGAACAG---------AGCGCCC.....................................................................	22	20	0.05	1	1	0	0	0	0	0
...........................................................................................................................TTACTGGGCCGACCAGGCCGAGG.............................................................................................................................	23	20	0.05	1	1	0	0	0	0	0

droGri2

--------------------------------------------------------------------------------TTTGCCTTCCAGAGTTGCTGCAGGAATATTTTGCACCTAGCAATTGCAGGTCCAATAAGACCAAGAGGATCATAGATACACGCAATCGT------GTACAAGATGG---------ATCGCTTGGAGAGTTTT-GAAT---TTGGG------CGAACAGGTGACAACAAAAACAAAAGATTATCCGAAACTG	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dsi_12447

3l:24010925-24011074 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-0.4	-0.4	-0.1