ID:

dsi_12295

 Coordinate:

x:15364110-15364393 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-53.8 -53.7 -53.7

Flybase annnotation

exon [x_15364394_15364529_+]; CDS [x_15364394_15364529_+]; exon [x_15363519_15364109_+]; CDS [x_15363519_15364109_+]; intron [x_15364110_15364393_+]

Repeatable elements

NameClassFamilyStrand
(TTA)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTAAGATATTCGAATATATGGCAGAAAATGTATTTATCAACAGAGTTATGGTTCACTCAACTATTTATAAGCATTTCAAGGAATGGCAGACTGCATGTGATAAACGGTATTATTATTATTACTATTATTATAACTATAACTATTACTTAGTTTCTATCAAGCAGATCTCGACCGGCTAATATAGTACTTGATAGAATACTGGGGATTATACTGATGCTAATACTATTTTCGCTTGCCACACAGCCTGGTGATTTTCTAATACAAATATCTCATGTATGTCCGCCATACAAATTTGATTTTAAATATGTGACATTAACTTGCTTATCTATTGTAGTACGTCATTGACGAATTGTACGGCCTGTTGAAAGTATTAGAGGGCAGTCC
**************************************************.........((.((..(((((((..........((((.(((((((((.((((....((((((....(((((.(((((.(((((............((((((((((((((((.........................)))))))))).))))))..))))).))))).)))))......(((((.((......))..))))).....))))))...)))).)))))).))).))))((((.(((((....))))).)))).........)))))))..)).))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR553487
NRT_0-2 hours eggs
................................................................................................................................................................................................................................................................................................................................................................TACGGCCTGTTGAAAGTATTAGAGGGC..... 27 0 1 2.00 2 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................TTGACGAATTGTACGGCCTGTTGAAAG................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................TGTACGGCCTGTTGAAAGTATTAGAGGG...... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................AAGGAATGGCAGACTGCATG............................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................CGGCCTGTTGAAAGTATTAGAGGGCAG... 27 0 1 1.00 1 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................CATTGACGAATTGTACGGCCT........................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................TGTACGGCCTGTTGAAAGTATTAGA......... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................ACGGCCTGTTGAAAGT............... 16 0 1 1.00 1 0 1 0 0 0 0 0 0
.......................................................................................AGACTGCCAGTGATAAAC....................................................................................................................................................................................................................................................................................... 18 2 2 0.50 1 0 0 0 0 0 1 0 0
........................................................................................................................................................................................TAGTTGATAGAATAATGTGGA................................................................................................................................................................................... 21 3 4 0.25 1 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................TTGATAGAATAATGTGGAT.................................................................................................................................................................................. 19 2 4 0.25 1 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................TTGATAGAATAATGTGGA................................................................................................................................................................................... 18 2 8 0.25 2 0 0 0 0 1 0 0 1
........................................................................ATATCAAGGATTGACAGACT.................................................................................................................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 1 0
............................................................................CAAGGATTGACAGACTG................................................................................................................................................................................................................................................................................................... 17 2 12 0.17 2 0 0 0 0 2 0 0 0
................................................................................................................................................................................................................................................................................................................................................................TACGGCCTGTTGAGA................. 15 1 7 0.14 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................CGAATCGTACGGCCT........................ 15 1 10 0.10 1 0 0 0 0 0 0 0 1
.........................................................................................................................................................................................AGTTGATAGAATAATGTGGA................................................................................................................................................................................... 20 3 10 0.10 1 0 0 1 0 0 0 0 0
............................................................................CAAGGATTGACAGACTGG.................................................................................................................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 1 0 0 0 0 0

Anti-sense strand reads

AATTCTATAAGCTTATATACCGTCTTTTACATAAATAGTTGTCTCAATACCAAGTGAGTTGATAAATATTCGTAAAGTTCCTTACCGTCTGACGTACACTATTTGCCATAATAATAATAATGATAATAATATTGATATTGATAATGAATCAAAGATAGTTCGTCTAGAGCTGGCCGATTATATCATGAACTATCTTATGACCCCTAATATGACTACGATTATGATAAAAGCGAACGGTGTGTCGGACCACTAAAAGATTATGTTTATAGAGTACATACAGGCGGTATGTTTAAACTAAAATTTATACACTGTAATTGAACGAATAGATAACATCATGCAGTAACTGCTTAACATGCCGGACAACTTTCATAATCTCCCGTCAGG
**************************************************.........((.((..(((((((..........((((.(((((((((.((((....((((((....(((((.(((((.(((((............((((((((((((((((.........................)))))))))).))))))..))))).))))).)))))......(((((.((......))..))))).....))))))...)))).)))))).))).))))((((.(((((....))))).)))).........)))))))..)).))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 O001
Testis
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 M025
embryo
.............................................................................................................................................................................................................................................................................................................................................................ACCATGCCGGACAAC.................... 15 1 7 5.29 37 18 14 2 0 0 3 0 0
.............................................................................................................................................................................................................................................................................................................................................................ACCATGCCGGACAACT................... 16 1 3 4.67 14 6 6 0 2 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................ATGCCGGACAACTCT................. 15 1 7 1.86 13 8 2 1 0 0 2 0 0
...............................................................................................................................................................................................................................................................................................................................................................CATGCCGGACAACTCT................. 16 1 3 1.67 5 2 1 0 1 0 1 0 0
..............................................................................................................................................................................................................................................................................................................................................................ACATGCCGGACAACT................... 15 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................CATGCCGGACAACTT.................. 15 0 1 1.00 1 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................ACCATGCCGGACAACTTTCAA.............. 21 2 1 1.00 1 0 0 1 0 0 0 0 0
....................CGTCTTTTACATAAATAGT......................................................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................TAACCATGCCGGACAACTT.................. 19 2 2 0.50 1 0 0 0 0 1 0 0 0
............................................................................................................................................................................................................................................................................GAGTACAGCCAGCCGGTATGT............................................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 1 0
...............................................................................................................................................................................................................................................................................................................................................................CATGCCGGACAACTC.................. 15 1 4 0.50 2 1 1 0 0 0 0 0 0
.........................................................................AAAGCTCCTTTCCGTCTG..................................................................................................................................................................................................................................................................................................... 18 2 5 0.40 2 0 0 0 2 0 0 0 0
...................TCGTCTTTTTCAAAAATAGTTGT...................................................................................................................................................................................................................................................................................................................................................... 23 3 3 0.33 1 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................CCATGCCGGACAACT................... 15 1 3 0.33 1 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................CGCTAATCATGCCGGACAAC.................... 20 3 4 0.25 1 0 0 0 0 0 0 1 0
...........................................................................................................................................................................................................................................................................................................................................................ATAACCTGCCGGACAACT................... 18 2 4 0.25 1 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................CCGATAAACATGCCGGACAAC.................... 21 3 5 0.20 1 0 0 0 0 0 0 1 0
...................................................................................................................................................................................................................................................................................................................................................................CCGGACAACTCTCAAAATAT......... 20 3 11 0.18 2 0 0 0 0 0 0 0 2
......................................................................................................................................ATATTGATAATGAGTCAAAGTTAATT................................................................................................................................................................................................................................ 26 3 6 0.17 1 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................AAATGCCGGACAACT................... 15 1 15 0.13 2 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................GACCATGCCGGACAACT................... 17 2 9 0.11 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................................................................ATTATGTTTGTAGAG................................................................................................................. 15 1 13 0.08 1 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:15364060-15364443 + dsi_12295 TTAAGATATTCGAATATATGGCAGAAAATGTATTTATCAACAGAGTTATGGTTCACTCAACTATTTATAAGCATTTCAAGGAATGGCAGACTGCATGTGATAAACGGTATTATTA--TT---A-TTACTATTA--------------------T-TATA-----------------------------ACTATAACTATTA-----------------------------------------------CTTA-------------------G--T------------------------TTCTATC----------------AAGCAGATCTCGACCGGCTAATATAGTACTTGATAGAATACTGGGGATTATACTGATGCTAATACTATTTTCGCTTGCCACACAGCCTGGTGATTTTCTAATACAAATATCTCATGTATGTCCGCCA------------------TACAAATTTGATTTTAAAT----------------ATGTGACATTAA---CTT----------GCTTATCTATTGTAGTACGTCATTGACGAATTGTACGGCCTGTTGAAAGTATTAGAGGGCAGTCC
droSec2 scaffold_17:71446-71823 + TTAAGATATTCGAATATATGGCGGAAAATGTATTTATCAACAGAGTTATGGTTCACTCAACAATTTATAAGCATTTCAAGGAATGGCAGACTGCATGTGATAAAAGGTATTATTA--TT---A-CTA--------------------------T-TATA-----------------------------ACTATAACTATTA-----------------------------------------------CTTA-------------------G--T------------------------TTCTATC----------------AAGCAGATCTCGACCGGCTAATATAGTACTTGATAGAATACTGGGGATTATATTGATGCTAATACTATTTTCGCTTGCCACACAGCCTGGTGATTTTCTAATACAAATATCTCATGTATGTCCGCCA------------------TAAAAATTTGATTTTACAT----------------ATGTGCCATTAA---CTT----------GCTTATCTATTGTAGTACGTCATTGATGAATTGTACGGCCTGTTGAAAGTATTAGAGGGCAGTCC
dm3 chrX:16253914-16254305 + TTAAGATATTCGAATATATGGCGGAAAATGTATTTATCAACAGCATTATGGTTCACACAACTATTTATAAGCATTTCAAGGAATGGCAGACAGCATGTGATAAAAGGTAGTTG--GGTT---A-A-----------------------------------------------ATCGA-TGATGCTAAA--------TA---------------------------------TCAT---ATTACTATTACTTA-------------------G--T------------------------TTCTATC----------------AAGCAGATCTCGACCGGCTAATATAGTTCTTGATAGAATACTGGGGATTATATTGATGCTAATACTATTTACGCTTGCCACACAGCCTGGTGATTTTCTAATACAAATATCTCATGTATGTCCGCCA------------------TACAAATTTGATTTTACAT----------------ATGTGACATTAA---CTTATT-------GCTTATCTATTGTAGTACGTTATTGACGAATTGTACGGCCTGTTGAAAGTATTAGAGGGCAGTCC
droEre2 scaffold_4690:10843312-10843695 - TTAAGATATTCGAATATGTTGCGGAAAATGTAATTGTCAACAGTATTATGGTTCATACAACTATTTATAAGCATTTCAAGGAATGGCAAATAGCATGTGATAAAAGGTAATTG--AGCT---A-A-----------------------------------------------ATCGAATGGT---------------AC-------------------------CAT---TTCAT---ATTACTATTACTAG-------------------T--T------------------------TTCTATC----------------AAGCAGATCTCGACCGGCTAATATAGCACTTGATAGAATAATGGGAATTATATTGATGCTAATACTATTTTCACTTGCCACACAGCCAGGTGATTTTCTAATACAAATATCTCATGTAAGTCCGCCA------------------TCCAAATTTGATTT----G----------------ATATGACATTTA---TGT----------GCTTATTTATTTCAGTATGTCATTGACGAATTATACCGGCTGTTGAAAGTATTAGAGGGCAGCCC
droYak3 X:10375230-10375614 + TTAAGATTTTTGAATATATTGCTGAAAATGTATTTGTTAACAGCATTATGGTTCATACAACTATTTATAAGCATTTTAAGGAATGGCAGGCAGCATGTGATAAAGGGTAATTA--AACT---A-A-----------------------------------------------ATCGA-TGGTACTACA--------TT---------------------------------TCAT---ATTACTATTACTAG-------------------T--T------------------------TTCTATC----------------ACGCAGATCTCGACCGGCTAATATAGCACTTGATAGAATACTGGGGATTATATTGATGTTAATACTATTTTCACTTGCCACACAGCCAGGTGATTTTCTAATACAAATATCTCATGTAAGTCCGCCT------------------TCCAAATTCGTTT----GT----------------ATTTGACATTTA---TTT----------GCTGATTTATTCTAGTATGTCATTGACGAATTGTACAGCCTGTTGAAAGTATTAGAGGGCAGCCC
droEug1 scf7180000409008:1363992-1364370 - TAACGATGTTTAAATATATTGCTGAAAATATATTTGTTAATAGTATAATGGTTCATACAACTATATATAAGCATTTTAAGGAATGGCAGTTAACGTGTGATAAAAGGTAAAATTAATTT---A-A-----------------------------------------------GTCGA----T---------------AC-------------------------TAA---TTTAC---ATTATTAAAATT-----------------------------------------TCATTTAT---------------------GTTTTTAGATCTTGCCTGGCTAATATAGCACTTGATAGAATACTGGGGATTATACTAATGTTAATTCTTTTATCACTTGCGGCACAGCCGGGTGATTTTCTAATACAAATATCCCACGTAAGTATAAAA------------------TCGAAAATTCAAATTATTA----------------GAGTAATATT-----------ACCTTT-TC-------TTATAGTACGTTATTGACGAATTATACATCCTATTGAAAGTATTAGAGGGCAGTCC
droBia1 scf7180000302126:755237-755622 - TAGCGATATTCAGATATATTGCTGAAAATGTGTTTGTCAACAGCATAATGGTTCATACCAGCATCTACAAGCATTTCAGGGAGTGGCAGACCACATGTGAAGAGGGGTAATTC--AGTT---TACCATAGAAGT-----------------------------------------------TTTT---ACCCAATCTATTA-----------------------------------------------TAAT-------------------CTT----------------------TGT---------------------GTCCATAGGTCTCGCCCGCCTAATATTGCACTTGACAGAGCTTTGGGGATCATACTGATGTTAATACTCTTCTCCCTAGCCACACAGCCGGGAGACTTTCTTATACAAATATCCCACGTAGGTCTGATA------------------TCTAAGAT---------------CTCATATCACATA--TTACAT--CCTACTATTTTACCCT-TT-------TCCCAGTACGTTATTGACCAGCTGTACAGCCTGTTAAAAGTACTGGAGGGCAGTCC
droTak1 scf7180000413933:25274-25665 - TAACGGTGTTTAAATATGTTGTTGAAAATGTGTTTGTCAATAGCATAATGGTTCATACAAGCATCTACAAACATTTCAAGGAGTGGCAGACAACCTGTGATGGGCGGTAATTT--ATTT---CAAAATAATAAT----A--------------T----TCACCTTA-------TCAA----T---------------ACTA-----------------------------------------------CT-----------------------------------------TCATTTAC---------------------CTTGACAGATCTCGCCCTGCTAATATTGCACTTGATAGAATATTGGGAATGATATTGATGCTCATACTTTTCTCCCTAGCGACACAGCCGGGAGATTTTCTCATTCAAATATCCCACGTAAGTATTTTTATATATTTAAATA-----TATAAAAT---------------AATTTATAGT--ATATTGTG-----------TTTACTTG-AA-------CATTAGTACGTTATTGATGAGTTATACAGCCTATTGAAGGTACTGGAAGGCAGTCC
droEle1 scf7180000491182:3657-4068 - TTTCAATATTTAAATGTGTTGTTGAAAATGTATTTGTCAATAGCATAATAATTCATACGACTATCTACAAGCACTTCAAGGAATGGCAAGCAACCTGTGATAAACGGTAATGA--ACGT---A-AAATAAACGA----A--------------C----TAACTTAA-------TCGA----T---------------AC-------------------------CAC-------------------CATTT-------ATTTTCGAAAACT----TACGATTTAAC-TTGTTTATTTGT---------------------TTTGACAGTACTCGCTCGGCTAATATTGCTCTTGATAGAATAATTGGAGTTACATTGATGCTTATCCTTTTTTCACTAGCGACACAGCCTGGAGATTTTCTAATACCAATATCCCACGTAAGTCTTTCA------------------CCCAACGTTT-------AA--------AATA----AAGTGACGTC-------ATGTTTTCAA-TT-------TGTTAGTACGTGATTGACGAATTATACAGCCTATTAAAGGTTTTAGAGGGCAGTCC
droRho1 scf7180000779395:16980-17377 + TTACAATGTTTAGATATATTGTAGAAAATGCGTTCGTCAATATCATAATGATTCATACGACTATCTACAAACACTTTAAGGAATGGCAAACAACCTGTGATAATCGGTAATAA--AAGG---A-AAAAAACCAT----A--------------T----TCATTTAA-------TCGA----T---------------AC-------------------------TAAATGTTTGTAAATA-----------------------------------TACCATT---------TTGCTTAT---------------------CTTGGCAGAACTCGCCAGGCTAACATTGCACTTGATAGAATAATGGGAATGATAGTGATGCTAATACTTTTTTCATTAGCGACACAGCCGGGAGATTTTCTTATACCTATATCGCACGTAAGTCTGTCA------------------CTTAACGTTGTCACTTGTT----------------ACGTTACA-----------TTTACCAT-TT-------TGTCAGTACGTTATTGACGAATTATACAGCCTACTAAAGGTATTAGAAGGAAGTCC
droFic1 scf7180000453495:519166-519552 + TTACAATATTCAAATATATTGTTGAAAATGTATTCATTAATAGCATAATGGTTCATACCACTATTTATAAGCACTTTAAGGAATGGCAGACAGCTTGTGATAAACGGTAATGG--CTCT---T-AAATACT------------------------------AT---------------------------------------TTTT--T---------------------------------------CTTT------------------------GTTATTTGACATTATTTCTTCAC---------------------TTTGACAGATCTCGCCCGGCTAACATTGCACTTGATAGAATATTGGGAATGGTTTTAATGGCAATCCTTTTTTCCCTAGCAACGCGGCCAGGGGATTTTGTGATACAAATATCCCACGTAAGTCTGCCATTACAT----ATA-----TGTAAAA----------CG----------------ATATATTATTTT---ATT-CTCCCCCT-GT-------TATTAGTATATTATAGACAAATTATTTAGCCTATTGAAAGTACTGGAGGGAAGTCC
droKik1 scf7180000302698:50955-51393 - TGGCTATATTTAGATATATTGCCGAAAACGTATTTGTGAACAGCATAGTAGTGCATACGACTATATACAAGCATTTTAAAGAATGGCAGTCAACTTGTGATACACGGTAAGAGT--GCAGTTC-A----GATTACATCTTTGATATGTACTTGTACCTG--CCTTGGGTACAATCGAATACAT--------------C---------------------------------TGAA---TATACCATTTTTAATTATTTATTTTTGTAAA--C--C-----------------------------C----------------TGTATAGATCTCGTCCTATAAATATTGCTTTGGATAGAATACTGGGTGTTATTTCCATGATAATACTCTTTTCGCTTGCCACACAACCAGGAGATTTTCTTATACAGATATCACACGTAAGTTGGGCCTATCTC------------CGAAGTAGAA-------TC----------------ATCTAATATTTA---T--ATTTATTTT-CA-------TTTCAGGTTGTTATTGATCAATTATACAGCCTGTTGAAGGTATTGGAGGGCAGTCC
droAna3 scaffold_13137:1022370-1022759 - TGGTATTTTTTCAATATTTTGTTGCAAATATTTTTGTCAATAAACTTATTGAGCATACAACAGTCTACAAAAACTTTAAGGAATGGAATAAGGAATACGATAAAGGGTAATAT--ATTT---A-CATAC---------------------------------TTTGTA----AACGA-TGGG--------TGTAATTATTATAT----------------------------------------ATTTTTTG-------------------T--A------------------------TTATAA----------------TACACAGATCAAGACAAACAAATATAATACTTGATCGTGTTATAGGAATGATATTAATGGTAATACTGTTTTCTTTAGCGATACAGCCAGGAGATTTTCTCATTCAAGTTTCTCACGTAAGTAAGGCT------------------ATAAAATGTT-------AA----------------AAAAAAAGTTTA---ATAATTTATCTC-TG-------TACTAGGCTATTATTGGACATCTGTACAGCCTCCTAAACGTATTAGAAGGAAGCCC
droBip1 scf7180000396784:22133-22523 + TTGTATTCTTTCAATATCTTTTTGAAAACATTTTGGTCAATAAACTTATTGAGCATACAACAGTTTACAAAAACTTTAAGGAATGGAAACAAACTTACGGAAAGGGGTAATAC--ATTT---G-T---------------------------------TTGCGTTA-------TAAA----TGATA--AATGTAATGATTATATTTTTT---------------------------------------CTCT-------------------G--A------------------------TTATAA----------------TTTACAGATCCAGACAACCGAATATAATACTTGATCGTGTTATAGGTATGCTATTAATGGTAGTGCTGTTTTCTTTAGCTATACAGCCAGGAGATTTTCTCATTAAAGTTTCTCACGTACGTAAGCTA------------------TACAACATTA-------AA----------------ATATAATATTAA---ATTTTTTCTCTC-TA-------TATAAGGCCATTATTGGAAATGTGTACAGTCTTCTGAACGTATTAGAAGGAAGTCC
dp5 XL_group1e:9831416-9831805 + TACAGTTGTTTAAATATACTGCCGAAAATGTTTTCATTAATAACATAATGGGACACACGACTGTTTACAAGCACTTTAAAGAATGGCAATCAACCTGTGATAAAGGGTAAGAATA--AT---T-TTG--------------------------TACATG--AC---------------------------TT-----------------------------------------------TT-----------------ATTTTTATTGA--T--T------------------------TTCTATACATTTTTTTTGTTTCGTTATAGTAATAGGATGAAAAATATTGTATTAGATCGAGTGTTGGGTATACTCTTGATGGTGATAATGTTTTCATTAGTTACCTCACCGGGCGATTTCCTTATACAAATATCCCATGTAAGTTGGTCG------------------AGAAATGCAC-------AG----------------ATTTAGCAATTA---TCTATTTACCAT-TA-------TTTTAGGGTATTATTAACCAGCTATACAGCCTGTTGAATGTTTTGGAAGGAAGTCC
droPer2 scaffold_22:370045-370435 - TACAGTTGTTTAAATATACTGCCGAAAATGTTTTCATTAATAACATAATGGGACACACGACTGTTTATAAGCACTTTAAAGAATGGCAATCAACCTGTAATAAAGGGTAAGAATC--AT---T-TTG--------------------------TACATG--AC----------------------------------------------------------------------TT---TTT-----------------ATTTTTATTGA--T--T------------------------TTCTATCAATTTTTTTTGTTTCGTTATAGTAATAGGATGAAAAATATTGTATTAGATCGAGTATTGGGTATACTCTTGATGGTGATAATGTTTTCATTAGTTACCTCACCGGGCGATTTCCTTATACAAATATCCCATGTAAGTTGGACG------------------AGAAATGCAC-------AC----------------ATTTAGCAATTA---TCCATTTACCAT-TA-------TTTTAGGGTATTATCAACCAGCTATACAGCCTGTTGAATGTTTTGGAAGGAAGTCC
droWil2 scf2_1100000004909:9140708-9141095 - CAGTTGTATTTAAATATGCTGTTGAAAATAGATTCATTAATAAGCTAATGATGCACACATGTGTCTATAAACATCATAAGGAATGGCAAGAAACATATGATAAAGGGTAAAATTT--GA---A-CACCT---------------------------CCTGG-----------------------------CGTAACAGTTA-----------------------------------------------ATTA--------------------------------------ATCC-----TTGTGT----------------TCAATAGATCCAGACGAACCAATATAATAATCGATCGCATATTGGGCATAATATTGATGATGATATTATTTAAGTTTGTCTCCCATCCCAGTGACTTTCTCATCAAAATGTCACATGTACGTATCCTGTGCAGA-----A-GGATAATGCAGCCAC-------AA----------------AAAAAAAATAAA---TCAATTTCTTCTTAT-------GTTTAGGGTATCATCAAGCAGTTATATGCCTTGTTGAGAGTATTGGAAGGTAGTCC
droVir3 scaffold_12970:7631082-7631477 - dvi_13503 TGCAAATGTTTCAATATATTGTTGGCAACAAATTTATAAATAGTATAATAACCCACACAGTCATTTATAGACATTATAAGGAATGGCAATCGATCTATACAAAGGGGTAAGATTT--GG---T-TAACA---TT----T--------------T------------------------------------------------------TCATTCATTT------TAA---TTTAT---TTATTTATTAAT-----------------------------------------------------------ATATTTT----ATTCTCAGTTCCAGATTGTCGAATATTATGATTGATCGTGCATTGGGCATTATTTTGATGCTGGTATTGTTTACGCTTGTTTCTCATCCAGGCGATTTCCTTATTCAGATCTCCCACGTAAGCTCAACGTTTTTA-----T-AG---ACGACAAACTGCTCTGTCA----------------CTGAAGAGTC----------ATCTTTT-CT-------TTTCAGATTATTATACATCAGCTATATAGTCTTTTGAAGGTTTTGGAGGGTAGTCC
droMoj3 scaffold_6482:2057309-2057691 + TGCAATTATTTAAACATATTGTTGGGAACACATTTGTAAATAGCATTATAACCCATACAGTTATCTATACGCATTATAAGGAATGGCAAACTATATACGCAACAGGGTAAGAT--GTCT---A-AAGTATATTT-----------------------------------------------AT--------------T---------------------------------TGAC---CCCCTTTTTCTCAA-------------------C--T------------------------TTT-------------TGTTTATAATCAGTTCTAGGCTGACAAATATCATGGTAGATCGAGCATTGGGTATTATACTAATGTTGATATTGTTTACACTTGTCTCGCATCCAGGAGATTTTCTAATACAAATCTCCCATGTAAGTTTACCT------------------ATTTCAATTGATGT---------------------A--TTATGG--TTTTAAACAATATATT-AT-------TTACAGATTATAATACAACAGCTATATAGCTTGCTGAAAGTTTTGGAGGGTAGTCC
droGri2 scaffold_15203:6985419-6985821 + TGCAGTTGCTTGAAAATATTATCGGCAATACATTCGTGAATAGTATAATAACCCATACTGTTATCTATAGGCATTATAAGGAATGGCAATTGATATACGCAAATGGGTGAGTT---------T-A----------------------------AACAAA--AC-----------C----------------------------TTT--TAATTTTTTCTGATTCTG-------------------A-----------------------------TACTAATTTGA-TTATTTATATGA---------------------CTTCCCAGTTCTAGATTGAGTAATATAATAATAGATCGAGCATTGGGCATTATATTGATGCTGACATTATTTACGCTTGTTTCGCATCCAGGTGATTACCTTATTCAAATCTCCCACGTAAGCCAAACG------------------TTTTAATT-GA------TAAGATGTTGTACG----CTAAAATACATA---CCTATATAC-CA-TT-------TTACAGATCATTATAAATCAGTTATACAGCCTTCTGAAAGTTTTGGAAGGGAGTCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTAAGATATTCGAATATATGGCAGAAAATGTATTTATCAACAGAGTTATGGTTCACTCAACTATTTATAAGCATTTCAAGGAATGGCAGACTGCATGTGATAAACGGTATTATTA--TT---A-TTACTATTA--------------------T-TATA-----------------------------ACTATAACTATTA-----------------------------------------------CTTA-------------------G--T------------------------TTCTATC----------------AAGCAGATCTCGACCGGCTAATATAGTACTTGATAGAATACTGGGGATTATACTGATGCTAATACTATTTTCGCTTGCCACACAGCCTGGTGATTTTCTAATACAAATATCTCATGTATGTCCGCCA------------------TACAAATTTGATTTTAAAT----------------ATGTGACATTAA---CTT----------GCTTATCTATTGTAGTACGTCATTGACGAATTGTACGGCCTGTTGAAAGTATTAGAGGGCAGTCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGGCCTGTTGAAAGTATTAGAGGGC.....2712.00200000011000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACGAATTGTACGGCCTGTTGAAAG................2711.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACGGCCTGTTGAAAGTATTAGAGGG......2811.00100000010000000000
.............................................................................AAGGAATGGCAGACTGCATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCCTGTTGAAAGTATTAGAGGGCAG...2711.00100000000000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGACGAATTGTACGGCCT........................2111.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACGGCCTGTTGAAAGTATTAGA.........2511.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCCTGTTGAAAGT...............1611.00100000001000000000
droSec2
TTAAGATATTCGAATATATGGCGGAAAATGTATTTATCAACAGAGTTATGGTTCACTCAACAATTTATAAGCATTTCAAGGAATGGCAGACTGCATGTGATAAAAGGTATTATTA--TT---A-CTA--------------------------T-TATA-----------------------------ACTATAACTATTA-----------------------------------------------CTTA-------------------G--T------------------------TTCTATC----------------AAGCAGATCTCGACCGGCTAATATAGTACTTGATAGAATACTGGGGATTATATTGATGCTAATACTATTTTCGCTTGCCACACAGCCTGGTGATTTTCTAATACAAATATCTCATGTATGTCCGCCA------------------TAAAAATTTGATTTTACAT----------------ATGTGCCATTAA---CTT----------GCTTATCTATTGTAGTACGTCATTGATGAATTGTACGGCCTGTTGAAAGTATTAGAGGGCAGTCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................................TAGAATACTGGGGATTATATTGATGCT.....................................................................................................................................................................................................................2711.0010100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGATGAATTGTACGGCCT........................2111.0010100
dm3
TTAAGATATTCGAATATATGGCGGAAAATGTATTTATCAACAGCATTATGGTTCACACAACTATTTATAAGCATTTCAAGGAATGGCAGACAGCATGTGATAAAAGGTAGTTG--GGTT---A-A-----------------------------------------------ATCGA-TGATGCTAAA--------TA---------------------------------TCAT---ATTACTATTACTTA-------------------G--T------------------------TTCTATC----------------AAGCAGATCTCGACCGGCTAATATAGTTCTTGATAGAATACTGGGGATTATATTGATGCTAATACTATTTACGCTTGCCACACAGCCTGGTGATTTTCTAATACAAATATCTCATGTATGTCCGCCA------------------TACAAATTTGATTTTACAT----------------ATGTGACATTAA---CTTATT-------GCTTATCTATTGTAGTACGTTATTGACGAATTGTACGGCCTGTTGAAAGTATTAGAGGGCAGTCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................TTCAAGGAATGGCAGACAGCATGTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2618.0080000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010100100000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................TAGAATACTGGGGATTATATTGATGC......................................................................................................................................................................................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000011000000000000000010100000
...........................................................................TCAAGGAATGGCAGACAGCATGTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010000000
.........................................................................TTTCAAGGAATGGCAGACAGCATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
........TTCGAATATATGGCGGAAAATGTATT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TGTATTTATCAACAGCATTATGGTTCACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TTTCAAGGAATGGCAGACAGCATGTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.........................................................................................................................................................................................................................................................................................................................................................................ACTGGGGATTATATTGATGCTAAT..................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000
..........................................................................TTCAAGGAATGGCAGACAGCATGTGATA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTGTAGTACGTTATTGACG.....................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................ATAGAATACTGGGGATTATATTGATGC......................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGAAAGTATTAGAGGGCAGT..2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000010000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGAATTGTACGGCCTGTTGAAAG................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGAAAGTATTAGAGGGCAGTCC2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000
...................................................................TAAGCATTTCAAGGAATGGCAGACAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAATTGTACGGCCTGTTGAAAG................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGACGAATTGTACGGCCTGTTGAAA.................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................AGGAATGGCAGACAGCATGTGATAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TATAGTTCTTGATAGAATACTGGGGAT.................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................TGGGGATTATATTGATGCTAA...................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TTCTTGATAGAATACTGGGGATTATAT............................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACGAATTGTACGGCCTGTTGAAAG................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TTCACACAACTATTTATAAGCATTTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGTACGGCCTGTTGAAAG................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTACGGCCTGTTGAAAGT...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TATAAGCATTTCAAGGAATGGCAGACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................TTTATAAGCATTTCAAGGAATGGCAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................GATAAAAGGTAGTTG--GGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----------------ATGTGACATTAA---CTTATT-------G................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTAA---CTTATT-------GCTTATCTATTGTAG..................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................ATAAGCATTTCAAGGAATGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TAAGATATTCGAATATATGGCGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................ACTGGGGATTATATTGATGCT.....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TCTTGATAGAATACTGGGGATTATAT............................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................GCTTGCCACACAGCCTGGT......................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................CATTTCAAGGAATGGCAGACAGCATGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................TTGCCACACAGCCTGGTGATTTTCTAA............................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TAAGCATTTCAAGGAATGGCAGACAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TACTGGGGATTATATTGATGCTAATAC................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................TATAAGCATTTCAAGGAATGGCAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................AGGTAGTTG--GGTT---A-A-----------------------------------------------ATA....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..........................................................................TTCAAGGAATGGCAGACAGCATGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................TTTCAAGGAATGGCAGACAGCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACGGCCTGTTGAAAGTATTAGAG........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................AATACTGGGGATTATATTGATGCTAA...................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................GATAGAATACTGGGGATTATATTGATG.......................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............................................................................CAAGGAATGGCAGACAGCATGTGATA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TTCTTGATAGAATACTGGGGA..................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TAGTTG--GGTT---A-A-----------------------------------------------ATCGA-TGATT............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTACGGCCTGTTGAAAGTG..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................GCTTGCCACACAGCCTGGTGAT...................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................ACTGGGGATTATATTGATGCTAATAC................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................TATC----------------AAGCAGATCTCGACCGGCTAATA..........................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................................AGAATACTGGGGATTATATTGATGCT.....................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TATTTACGCTTGCCACACAGC...........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ATATGGCGGAAAATGTATTTATCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TCGAATATATGGCGGAAAATGTATT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................TGATAGAATACTGGGGATTATATTGAT........................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................ATTTCAAGGAATGGCAGACAGCATGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTGTACGGCCTGTTGAAAG................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................AATGGCAGACAGCATGTGATAAAAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCTGGTGATTTTCTAATA..........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TATTACTTA-------------------G--T------------------------TTCTATC----------------.................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CTTGATAGAATACTGGGGATTAT..............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................GTT---A-A-----------------------------------------------ATCGA-TGATGCTGGC--------...............................................................................................................................................................................................................................................................................................................................................................................................................20110.1820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
droEre2
TTAAGATATTCGAATATGTTGCGGAAAATGTAATTGTCAACAGTATTATGGTTCATACAACTATTTATAAGCATTTCAAGGAATGGCAAATAGCATGTGATAAAAGGTAATTG--AGCT---A-A-----------------------------------------------ATCGAATGGT---------------AC-------------------------CAT---TTCAT---ATTACTATTACTAG-------------------T--T------------------------TTCTATC----------------AAGCAGATCTCGACCGGCTAATATAGCACTTGATAGAATAATGGGAATTATATTGATGCTAATACTATTTTCACTTGCCACACAGCCAGGTGATTTTCTAATACAAATATCTCATGTAAGTCCGCCA------------------TCCAAATTTGATTT----G----------------ATATGACATTTA---TGT----------GCTTATTTATTTCAGTATGTCATTGACGAATTATACCGGCTGTTGAAAGTATTAGAGGGCAGCCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
TTAAGATTTTTGAATATATTGCTGAAAATGTATTTGTTAACAGCATTATGGTTCATACAACTATTTATAAGCATTTTAAGGAATGGCAGGCAGCATGTGATAAAGGGTAATTA--AACT---A-A-----------------------------------------------ATCGA-TGGTACTACA--------TT---------------------------------TCAT---ATTACTATTACTAG-------------------T--T------------------------TTCTATC----------------ACGCAGATCTCGACCGGCTAATATAGCACTTGATAGAATACTGGGGATTATATTGATGTTAATACTATTTTCACTTGCCACACAGCCAGGTGATTTTCTAATACAAATATCTCATGTAAGTCCGCCT------------------TCCAAATTCGTTT----GT----------------ATTTGACATTTA---TTT----------GCTGATTTATTCTAGTATGTCATTGACGAATTGTACAGCCTGTTGAAAGTATTAGAGGGCAGCCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................GCTGAAAATGTATTTGTTAACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................CTTGATAGAATACTGGGGATTATATT...........................................................................................................................................................................................................................2611.00100000010000
droEug1
TAACGATGTTTAAATATATTGCTGAAAATATATTTGTTAATAGTATAATGGTTCATACAACTATATATAAGCATTTTAAGGAATGGCAGTTAACGTGTGATAAAAGGTAAAATTAATTT---A-A-----------------------------------------------GTCGA----T---------------AC-------------------------TAA---TTTAC---ATTATTAAAATT-----------------------------------------TCATTTAT---------------------GTTTTTAGATCTTGCCTGGCTAATATAGCACTTGATAGAATACTGGGGATTATACTAATGTTAATTCTTTTATCACTTGCGGCACAGCCGGGTGATTTTCTAATACAAATATCCCACGTAAGTATAAAA------------------TCGAAAATTCAAATTATTA----------------GAGTAATATT-----------ACCTTT-TC-------TTATAGTACGTTATTGACGAATTATACATCCTATTGAAAGTATTAGAGGGCAGTCCSizeHit CountTotal NormTotal
No Reads
droBia1
TAGCGATATTCAGATATATTGCTGAAAATGTGTTTGTCAACAGCATAATGGTTCATACCAGCATCTACAAGCATTTCAGGGAGTGGCAGACCACATGTGAAGAGGGGTAATTC--AGTT---TACCATAGAAGT-----------------------------------------------TTTT---ACCCAATCTATTA-----------------------------------------------TAAT-------------------CTT----------------------TGT---------------------GTCCATAGGTCTCGCCCGCCTAATATTGCACTTGACAGAGCTTTGGGGATCATACTGATGTTAATACTCTTCTCCCTAGCCACACAGCCGGGAGACTTTCTTATACAAATATCCCACGTAGGTCTGATA------------------TCTAAGAT---------------CTCATATCACATA--TTACAT--CCTACTATTTTACCCT-TT-------TCCCAGTACGTTATTGACCAGCTGTACAGCCTGTTAAAAGTACTGGAGGGCAGTCCSizeHit CountTotal NormTotal
No Reads
droTak1
TAACGGTGTTTAAATATGTTGTTGAAAATGTGTTTGTCAATAGCATAATGGTTCATACAAGCATCTACAAACATTTCAAGGAGTGGCAGACAACCTGTGATGGGCGGTAATTT--ATTT---CAAAATAATAAT----A--------------T----TCACCTTA-------TCAA----T---------------ACTA-----------------------------------------------CT-----------------------------------------TCATTTAC---------------------CTTGACAGATCTCGCCCTGCTAATATTGCACTTGATAGAATATTGGGAATGATATTGATGCTCATACTTTTCTCCCTAGCGACACAGCCGGGAGATTTTCTCATTCAAATATCCCACGTAAGTATTTTTATATATTTAAATA-----TATAAAAT---------------AATTTATAGT--ATATTGTG-----------TTTACTTG-AA-------CATTAGTACGTTATTGATGAGTTATACAGCCTATTGAAGGTACTGGAAGGCAGTCCSizeHit CountTotal NormTotal
No Reads
droEle1
TTTCAATATTTAAATGTGTTGTTGAAAATGTATTTGTCAATAGCATAATAATTCATACGACTATCTACAAGCACTTCAAGGAATGGCAAGCAACCTGTGATAAACGGTAATGA--ACGT---A-AAATAAACGA----A--------------C----TAACTTAA-------TCGA----T---------------AC-------------------------CAC-------------------CATTT-------ATTTTCGAAAACT----TACGATTTAAC-TTGTTTATTTGT---------------------TTTGACAGTACTCGCTCGGCTAATATTGCTCTTGATAGAATAATTGGAGTTACATTGATGCTTATCCTTTTTTCACTAGCGACACAGCCTGGAGATTTTCTAATACCAATATCCCACGTAAGTCTTTCA------------------CCCAACGTTT-------AA--------AATA----AAGTGACGTC-------ATGTTTTCAA-TT-------TGTTAGTACGTGATTGACGAATTATACAGCCTATTAAAGGTTTTAGAGGGCAGTCCSizeHit CountTotal NormTotal
No Reads
droRho1
TTACAATGTTTAGATATATTGTAGAAAATGCGTTCGTCAATATCATAATGATTCATACGACTATCTACAAACACTTTAAGGAATGGCAAACAACCTGTGATAATCGGTAATAA--AAGG---A-AAAAAACCAT----A--------------T----TCATTTAA-------TCGA----T---------------AC-------------------------TAAATGTTTGTAAATA-----------------------------------TACCATT---------TTGCTTAT---------------------CTTGGCAGAACTCGCCAGGCTAACATTGCACTTGATAGAATAATGGGAATGATAGTGATGCTAATACTTTTTTCATTAGCGACACAGCCGGGAGATTTTCTTATACCTATATCGCACGTAAGTCTGTCA------------------CTTAACGTTGTCACTTGTT----------------ACGTTACA-----------TTTACCAT-TT-------TGTCAGTACGTTATTGACGAATTATACAGCCTACTAAAGGTATTAGAAGGAAGTCCSizeHit CountTotal NormTotal
No Reads
droFic1
TTACAATATTCAAATATATTGTTGAAAATGTATTCATTAATAGCATAATGGTTCATACCACTATTTATAAGCACTTTAAGGAATGGCAGACAGCTTGTGATAAACGGTAATGG--CTCT---T-AAATACT------------------------------AT---------------------------------------TTTT--T---------------------------------------CTTT------------------------GTTATTTGACATTATTTCTTCAC---------------------TTTGACAGATCTCGCCCGGCTAACATTGCACTTGATAGAATATTGGGAATGGTTTTAATGGCAATCCTTTTTTCCCTAGCAACGCGGCCAGGGGATTTTGTGATACAAATATCCCACGTAAGTCTGCCATTACAT----ATA-----TGTAAAA----------CG----------------ATATATTATTTT---ATT-CTCCCCCT-GT-------TATTAGTATATTATAGACAAATTATTTAGCCTATTGAAAGTACTGGAGGGAAGTCCSizeHit CountTotal NormTotal
No Reads
droKik1
TGGCTATATTTAGATATATTGCCGAAAACGTATTTGTGAACAGCATAGTAGTGCATACGACTATATACAAGCATTTTAAAGAATGGCAGTCAACTTGTGATACACGGTAAGAGT--GCAGTTC-A----GATTACATCTTTGATATGTACTTGTACCTG--CCTTGGGTACAATCGAATACAT--------------C---------------------------------TGAA---TATACCATTTTTAATTATTTATTTTTGTAAA--C--C-----------------------------C----------------TGTATAGATCTCGTCCTATAAATATTGCTTTGGATAGAATACTGGGTGTTATTTCCATGATAATACTCTTTTCGCTTGCCACACAACCAGGAGATTTTCTTATACAGATATCACACGTAAGTTGGGCCTATCTC------------CGAAGTAGAA-------TC----------------ATCTAATATTTA---T--ATTTATTTT-CA-------TTTCAGGTTGTTATTGATCAATTATACAGCCTGTTGAAGGTATTGGAGGGCAGTCCSizeHit CountTotal NormTotal
No Reads
droAna3
TGGTATTTTTTCAATATTTTGTTGCAAATATTTTTGTCAATAAACTTATTGAGCATACAACAGTCTACAAAAACTTTAAGGAATGGAATAAGGAATACGATAAAGGGTAATAT--ATTT---A-CATAC---------------------------------TTTGTA----AACGA-TGGG--------TGTAATTATTATAT----------------------------------------ATTTTTTG-------------------T--A------------------------TTATAA----------------TACACAGATCAAGACAAACAAATATAATACTTGATCGTGTTATAGGAATGATATTAATGGTAATACTGTTTTCTTTAGCGATACAGCCAGGAGATTTTCTCATTCAAGTTTCTCACGTAAGTAAGGCT------------------ATAAAATGTT-------AA----------------AAAAAAAGTTTA---ATAATTTATCTC-TG-------TACTAGGCTATTATTGGACATCTGTACAGCCTCCTAAACGTATTAGAAGGAAGCCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................AACAAATATAATACTTGATCGTGTTATA......................................................................................................................................................................................................................................2811.001010000
.....................................................................................................................................................................................................................................................................................................................................................AATATAATACTTGATCGTGT..........................................................................................................................................................................................................................................2011.001001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGTATTAGAAGGAAGCCC2120.501010000
.........................................................................CTTTAAGGAATGGAATAAGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACATCTGTACAGCC.........................1920.501001000
droBip1
TTGTATTCTTTCAATATCTTTTTGAAAACATTTTGGTCAATAAACTTATTGAGCATACAACAGTTTACAAAAACTTTAAGGAATGGAAACAAACTTACGGAAAGGGGTAATAC--ATTT---G-T---------------------------------TTGCGTTA-------TAAA----TGATA--AATGTAATGATTATATTTTTT---------------------------------------CTCT-------------------G--A------------------------TTATAA----------------TTTACAGATCCAGACAACCGAATATAATACTTGATCGTGTTATAGGTATGCTATTAATGGTAGTGCTGTTTTCTTTAGCTATACAGCCAGGAGATTTTCTCATTAAAGTTTCTCACGTACGTAAGCTA------------------TACAACATTA-------AA----------------ATATAATATTAA---ATTTTTTCTCTC-TA-------TATAAGGCCATTATTGGAAATGTGTACAGTCTTCTGAACGTATTAGAAGGAAGTCCSizeHit CountTotal NormTotal
No Reads
dp5
TACAGTTGTTTAAATATACTGCCGAAAATGTTTTCATTAATAACATAATGGGACACACGACTGTTTACAAGCACTTTAAAGAATGGCAATCAACCTGTGATAAAGGGTAAGAATA--AT---T-TTG--------------------------TACATG--AC---------------------------TT-----------------------------------------------TT-----------------ATTTTTATTGA--T--T------------------------TTCTATACATTTTTTTTGTTTCGTTATAGTAATAGGATGAAAAATATTGTATTAGATCGAGTGTTGGGTATACTCTTGATGGTGATAATGTTTTCATTAGTTACCTCACCGGGCGATTTCCTTATACAAATATCCCATGTAAGTTGGTCG------------------AGAAATGCAC-------AG----------------ATTTAGCAATTA---TCTATTTACCAT-TA-------TTTTAGGGTATTATTAACCAGCTATACAGCCTGTTGAATGTTTTGGAAGGAAGTCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................................................................................................................TACTCTTGATGGTGATAAT...............................................................................................................................................................................................................1911.0010100000000
......................................................................................................................................................................................................................................................................................................................................................ATATTGTATTAGATCGAGTGTTGGGT...................................................................................................................................................................................................................................2611.0010000000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTATACAGCCTGTTGAAT.................2011.0010100000000
......TGTTTAAATATACTGCCGAAAATGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010100000000
droPer2
TACAGTTGTTTAAATATACTGCCGAAAATGTTTTCATTAATAACATAATGGGACACACGACTGTTTATAAGCACTTTAAAGAATGGCAATCAACCTGTAATAAAGGGTAAGAATC--AT---T-TTG--------------------------TACATG--AC----------------------------------------------------------------------TT---TTT-----------------ATTTTTATTGA--T--T------------------------TTCTATCAATTTTTTTTGTTTCGTTATAGTAATAGGATGAAAAATATTGTATTAGATCGAGTATTGGGTATACTCTTGATGGTGATAATGTTTTCATTAGTTACCTCACCGGGCGATTTCCTTATACAAATATCCCATGTAAGTTGGACG------------------AGAAATGCAC-------AC----------------ATTTAGCAATTA---TCCATTTACCAT-TA-------TTTTAGGGTATTATCAACCAGCTATACAGCCTGTTGAATGTTTTGGAAGGAAGTCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................................................................................................................................................................GTATTAGATCGAGTATTGGGTATACT..............................................................................................................................................................................................................................2612.002200000
.........................................AACATAATGGGACACACGACTGTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002200000
..........................................................................................................................................................................................................................................................................................................................................................................................................ATTAGTTACCTCACCGGGC......................................................................................................................................................................................1911.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................GTTTTCATTAGTTACCTCACCGGGC......................................................................................................................................................................................2511.001010000
.......................................................CACGACTGTTTATAAGCACTTTAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
droWil2
CAGTTGTATTTAAATATGCTGTTGAAAATAGATTCATTAATAAGCTAATGATGCACACATGTGTCTATAAACATCATAAGGAATGGCAAGAAACATATGATAAAGGGTAAAATTT--GA---A-CACCT---------------------------CCTGG-----------------------------CGTAACAGTTA-----------------------------------------------ATTA--------------------------------------ATCC-----TTGTGT----------------TCAATAGATCCAGACGAACCAATATAATAATCGATCGCATATTGGGCATAATATTGATGATGATATTATTTAAGTTTGTCTCCCATCCCAGTGACTTTCTCATCAAAATGTCACATGTACGTATCCTGTGCAGA-----A-GGATAATGCAGCCAC-------AA----------------AAAAAAAATAAA---TCAATTTCTTCTTAT-------GTTTAGGGTATCATCAAGCAGTTATATGCCTTGTTGAGAGTATTGGAAGGTAGTCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................................................................................................................................................................................................................AATCGATCGCATATTGGGC...................................................................................................................................................................................................................................1912.00200020
................................................................................................................................................................................................................................................................................................................................................GAACCAATATAATAATCGATCGCAT..........................................................................................................................................................................................................................................2511.00110000
........................................................................................................................................................................................................................................................................................................................................................................................................AAGTTTGTCTCCCATCCCAGTGACT..................................................................................................................................................................................2511.00101000
droVir3
TGCAAATGTTTCAATATATTGTTGGCAACAAATTTATAAATAGTATAATAACCCACACAGTCATTTATAGACATTATAAGGAATGGCAATCGATCTATACAAAGGGGTAAGATTT--GG---T-TAACA---TT----T--------------T------------------------------------------------------TCATTCATTT------TAA---TTTAT---TTATTTATTAAT-----------------------------------------------------------ATATTTT----ATTCTCAGTTCCAGATTGTCGAATATTATGATTGATCGTGCATTGGGCATTATTTTGATGCTGGTATTGTTTACGCTTGTTTCTCATCCAGGCGATTTCCTTATTCAGATCTCCCACGTAAGCTCAACGTTTTTA-----T-AG---ACGACAAACTGCTCTGTCA----------------CTGAAGAGTC----------ATCTTTT-CT-------TTTCAGATTATTATACATCAGCTATATAGTCTTTTGAAGGTTTTGGAGGGTAGTCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................GGCATTATTTTGATGCTGGT..................................................................................................................................................................................................................2013.003000000000000000000000000000000000000000000000000000000000000003
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGTTTTGGAGGGTAGT..1911.001000000000000000000000000000000001000000000000000000000000000000
...................................ATAAATAGTATAATAACCCACAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TTATGATTGATCGTGCATTGGGCATT................................................................................................................................................................................................................................2611.001000000000000010000000000000000000000000000000000000000000000000
.....................................................................GACATTATAAGGAATGGCAATCGATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000100000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGAAGGTTTTGGAGGGTAGTCC2511.001000000000100000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TCCAGATTGTCGAATATTATGATTGA................................................................................................................................................................................................................................................2611.001000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCATCCAGGCGATTTCCTTATTCA........................................................................................................................................................................2711.001000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................CGAATATTATGATTGATCGTGCAT........................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000010000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TTTTGATGCTGGTATTGTTTACGCTTG....................................................................................................................................................................................................2711.001000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGCTATATAGTCTTTT.....................2011.001000000000000000000000000000000000000100000000000000000000000000
.......................................ATAGTATAATAACCCACACAGTCATTTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TATGATTGATCGTGCATTGGGCATT................................................................................................................................................................................................................................2511.001000000000000000000000000001000000000000000000000000000000000000
droMoj3
TGCAATTATTTAAACATATTGTTGGGAACACATTTGTAAATAGCATTATAACCCATACAGTTATCTATACGCATTATAAGGAATGGCAAACTATATACGCAACAGGGTAAGAT--GTCT---A-AAGTATATTT-----------------------------------------------AT--------------T---------------------------------TGAC---CCCCTTTTTCTCAA-------------------C--T------------------------TTT-------------TGTTTATAATCAGTTCTAGGCTGACAAATATCATGGTAGATCGAGCATTGGGTATTATACTAATGTTGATATTGTTTACACTTGTCTCGCATCCAGGAGATTTTCTAATACAAATCTCCCATGTAAGTTTACCT------------------ATTTCAATTGATGT---------------------A--TTATGG--TTTTAAACAATATATT-AT-------TTACAGATTATAATACAACAGCTATATAGCTTGCTGAAAGTTTTGGAGGGTAGTCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................TTATAAGGAATGGCAAACTATATAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
droGri2
TGCAGTTGCTTGAAAATATTATCGGCAATACATTCGTGAATAGTATAATAACCCATACTGTTATCTATAGGCATTATAAGGAATGGCAATTGATATACGCAAATGGGTGAGTT---------T-A----------------------------AACAAA--AC-----------C----------------------------TTT--TAATTTTTTCTGATTCTG-------------------A-----------------------------TACTAATTTGA-TTATTTATATGA---------------------CTTCCCAGTTCTAGATTGAGTAATATAATAATAGATCGAGCATTGGGCATTATATTGATGCTGACATTATTTACGCTTGTTTCGCATCCAGGTGATTACCTTATTCAAATCTCCCACGTAAGCCAAACG------------------TTTTAATT-GA------TAAGATGTTGTACG----CTAAAATACATA---CCTATATAC-CA-TT-------TTACAGATCATTATAAATCAGTTATACAGCCTTCTGAAAGTTTTGGAAGGGAGTCCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 12:19 AM