ID:

dsi_12264

 Coordinate:

x:10143957-10144106 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.4 -16.2 -16.0 -15.9

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TACAAATGAAAACTAAATGAAAGAATGAAAAGGAAAAACGTTTTTAGCGGTACAAACATGAGTACAAATCAAGTTTTATTATTTTCGAATACATTAATTTTTTTTGTCTATTATGAAAGGGGAGTGTTTACCTATCGGAAGGAGATTTCTTTAGGCATATACATAAAATGAAGCGAAGTTGTTTTTTCTTCAATTGTTAGGCGCGTAAAAATTAAAGAGAGAGACAACAGCAACCAAGTTAGGTAGCCAG
**************************************************************...((...............(((((....((((.........((((((........(((((((.(((.((....))..))).))))))))))))).........))))...)))))...))******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 M053
female body
 M023
head
 SRR902009
testis
.................TGAAAGAATGAAAAGGAAAAACGTT................................................................................................................................................................................................................ 25 0 1 5.00 5 3 0 2 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TTAAAGAGAGAGACAACAGCAACCAAGT........... 28 0 1 5.00 5 0 0 1 4 0 0 0 0 0 0
...............................................................................................................................................................TACATAAAATGAAGCGAAGTTGTT................................................................... 24 0 1 4.00 4 1 2 0 0 1 0 0 0 0 0
..............................................................TACAAATCAAGTTTTATTATTTTCGAA................................................................................................................................................................. 27 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TACATAAAATGAAGCGAAGTTGTTTT................................................................. 26 0 1 4.00 4 2 2 0 0 0 0 0 0 0 0
....................................................................................................................................TATCGGAAGGAGATTTCTTTAGGCATA........................................................................................... 27 0 1 3.00 3 0 2 0 1 0 0 0 0 0 0
...............................................................................................................................TTACCTATCGGAAGGAGATTTCTTT.................................................................................................. 25 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TAAAGAGAGAGACAACAGCAACCAAGT........... 27 0 1 3.00 3 0 0 1 1 0 0 0 0 0 1
..........................................................................................................................................................................................TCTTCAATTGTTAGGCGCGTAAAAAT...................................... 26 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0
................................................................................................................................TACCTATCGGAAGGAGATTTCTTT.................................................................................................. 24 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0
......................................................................................................TTTGTCTATTATGAAAGGGGAGTTT........................................................................................................................... 25 1 1 2.00 2 1 0 0 0 1 0 0 0 0 0
.................TGAAAGAATGAAAAGGAAAAACGTTT............................................................................................................................................................................................................... 26 0 1 2.00 2 0 0 1 0 0 1 0 0 0 0
..................................................................................................TTTTTTTGTCTATTATGAAAGGGGA............................................................................................................................... 25 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................TCGGAAGGAGATTTCTTTAGGCATA........................................................................................... 25 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0
....................................................................................................................................TATCGGAAGGAGATTTCTTTAGGCAT............................................................................................ 26 0 1 2.00 2 0 0 0 1 0 1 0 0 0 0
..................................................................................................................................................................................................TGTTAGGCGCGTAAAAATTAAAGAGGGA............................ 28 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TAGGCGCGTAAAAATTAAAGAGGGA............................ 25 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TTTTCTTCAATTGTTAGGCGC.............................................. 21 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0
............................................................................................................................TGTTTACCTATCGGAAGGAGATT....................................................................................................... 23 0 1 2.00 2 0 0 0 0 0 0 0 0 2 0
...................................................................................................................................................................TAAAATGAAGCGAAGTTGTTTTTTCTT............................................................ 27 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................GTTTTTTCTTCAATTGTTAGGCGC.............................................. 24 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0
.....................................................................................................................................ATCGGAAGGAGATTTCTTTAGGC.............................................................................................. 23 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0
............................................................................................................................................................................................TTCAATTGTTAGGCGCGTAAAAAT...................................... 24 0 1 2.00 2 0 0 0 1 1 0 0 0 0 0
.............................................................................................................................................................TATACATAAAATGAAGCGAAGTTGTT................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TACATAAAATGAAGCGAAGTTGTTT.................................................................. 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................TCTTCAATTGTTAGGCGCGTAAAAATA..................................... 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................TTCTTCAATTGTTAGGCGCGTA........................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................ATGAAAGAATGAAAAGGAAAAACGTT................................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................TGTCTATTATGAAAGGGGAGTTTTA......................................................................................................................... 25 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................TAAAGAGAGAGACAACAGCAACCA.............. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................TGTTTTTTCTTCAATTGTTAGGCGCGT............................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................TTTCTTTAGGCATATACATAAAATGAT.............................................................................. 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................TATACATAAAATGAAGCGAAGTTGTTTT................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TTTTCTTCAATTGTTAGGCGCGTAAA......................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................................TTGTCTATTATGAAAGGGGAGT............................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
..........................................................TGAGTACAAATCAAGTTTTGTTATT....................................................................................................................................................................... 25 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................TTTTTTCTTCAATTGTTAGGCGCGTA........................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................AGAGACAACAGCAACCAAGTTAGGTAGC... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................CGCGTAAAAATTAAAGAGAGA............................ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
................................................................CAAATCAAGTTTTATTATTTTCGAATACA............................................................................................................................................................. 29 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................................GAGGGAGACAACAGCAACCAAGTTAGG....... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................TTTTTTGTCTATTATGAAAGGGGAGT............................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................TTTTTGTCTATTATGAAAGGGGAGTGTT.......................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
..................................................................................................................................................................................................................ATTAAAGAGAGAGACAACAGCAACCA.............. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................TTCTTCAATTGTTAGGCGCGTAAAAAT...................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..........................................TTTAGCGGTACAAACATGAGTACAAA...................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................TGAAAGAATGAAAAGGAAAAACGT................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................TTAGGCATATACATAAAATGAAGCGA.......................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................CAATTGTTAGGCGCGTAAAAATTAAA.................................. 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................TTTTTCAATTGTTAGCCGCGTAAA......................................... 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................AGGCATATACATAAAATGAAGCGAAGT....................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................AAAATTAAAGAGAGAGACAACAGC................... 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
....................................................................................................TTTTTGTCTATTATGAAAGGGGAGTTT........................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................AGTTTTTACCTATCGGAAGGAGATT....................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................TGTTTACCTATCGGAAGGAGATTTC..................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................CGGAAGGAGATTTCTTTAGGCATATACA....................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGTTAGGCGCGTAAAAATTAAAGAG............................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................TCTTCAATTGTTAGGCGCGTAA.......................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................TCTTCAATTGTTAGGCGCGTAAAAA....................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................TGTTTTTTCTTCAATTGTTAGGCGC.............................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
............................................................................................................TATTATGAAAGGGGAGTGTTTACCTATC.................................................................................................................. 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TTAAAGAGAGAGACAACAGCAACCA.............. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................TCAATTGTTAGGCGCGTAAAAAT...................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................TAGGCGCGTAAAAATTAAAGAGGGAGA.......................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TTCTTTAGGCATATACATAAAATGA............................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................TCAATTGTTAGGCGCGTAAAAATTAAAGA................................ 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................AACATGAGTACAAATCA................................................................................................................................................................................... 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................AGGGGAGTTTTTACCTATCGGAAGGAGA......................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................CCAAGTTACGTAGCCAG 17 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................TGTTTACCTATCGGAAGGAGATTTCTT................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AAGAGAGAGACAACAGCAACCAAGTT.......... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................ATTAAAGAGAGAGACAACAGCAACCAAGT........... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TCTTCAATTGTTAGGCGCGTAAA......................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................TAAAATGAAGCGAAGTT...................................................................... 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................CATAAAATGAAGCGAAGTTGTTTTT................................................................ 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................TTTCTTCAATTGTTAGGCGCGTAAAAAT...................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................TCTTCAATTGTTAGGCGCGTAAAAATT..................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TAAAAATTAAAGAGAGAGACAACAGC................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
......................................................................................................TTTGTCTATTATGAAAGGGGAGTTTT.......................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................TTTTTTTTGTCTATTATGAAAGGGGA............................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................TTACCTATCGGAAGGAGATTTCTTTA................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................ATTAAAGAGAGAGACAACAGCAACCAAG............ 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGTTAGGCGCGTAAAAATTAAAGAGAA............................. 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................CCATCGGAAGGAGATTTCTTTAGGC.............................................................................................. 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
TACAAATGAAAACTAAATGAAAGA.................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................TTCAATTGTTAGGCGCGTAAAAATT..................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TTAGGCGCGTAAAAATTAAAGAGGGA............................ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................TACAAACATGAGTACAAATCAAGT................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
...................................................................................TTCGGATACAATAATTTTTTTT................................................................................................................................................. 22 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................CAATTGTTAGGCGCGTAAAAATTAAAGAG............................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................ATGACAGAATGAATAGGTAAAA.................................................................................................................................................................................................................... 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0
.....................................................................CAAGTTTTTTTTTTTTCGAAT................................................................................................................................................................ 21 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0
...........................................TAAGCGATGCAAACATGAGTA.......................................................................................................................................................................................... 21 3 13 0.15 2 0 0 0 0 2 0 0 0 0 0
...............................................................................................................................TTAACTTTAGGAAGGAGAT........................................................................................................ 19 3 20 0.10 2 0 0 2 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TAAAAATTAAAGAGG.............................. 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................ATTAAAGAGCGTAACAACA..................... 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

ATGTTTACTTTTGATTTACTTTCTTACTTTTCCTTTTTGCAAAAATCGCCATGTTTGTACTCATGTTTAGTTCAAAATAATAAAAGCTTATGTAATTAAAAAAAACAGATAATACTTTCCCCTCACAAATGGATAGCCTTCCTCTAAAGAAATCCGTATATGTATTTTACTTCGCTTCAACAAAAAAGAAGTTAACAATCCGCGCATTTTTAATTTCTCTCTCTGTTGTCGTTGGTTCAATCCATCGGTC
*******************************************************************...((...............(((((....((((.........((((((........(((((((.(((.((....))..))).))))))))))))).........))))...)))))...))************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 SRR553488
RT_0-2 hours eggs
 M053
female body
.................................................................................................AAAAAAAACAGCTAGTACTT..................................................................................................................................... 20 2 1 1.00 1 1 0 0 0
...................................................................................AAGCTTCTGTAACTAAAAAA................................................................................................................................................... 20 2 3 0.33 1 0 1 0 0
...................................................................................AGGCTTCTGTAACTAAAAAAAA................................................................................................................................................. 22 3 8 0.13 1 0 1 0 0
......................................................................................................................................AGCGTTCCCCTAAAGAAA.................................................................................................. 18 2 10 0.10 1 0 0 1 0
..................................................................TTGGTTCAAAAAAAAAAAAGCT.................................................................................................................................................................. 22 3 14 0.07 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:10143907-10144156 - dsi_12264 TAC----------AA-----ATG-AA----AACTAAATGAAAGAATGAA-A------------------------------------------AGGAAAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATTTT------C-GAATACATTAA--------------TTTTTTT--T-GTCTA---TTATGAA------------AGGG-----GAGTGTTTACCT----ATCGGA----AGGAGATTTCTTTAGGCATATACA-TAA-----------AATGAAG--------------------------CG------AAGTTGT---TT--TTTCTTC-AATTGTTA-GGCGC--GTA--AAAATTA-AAGA--GAGAGACA---ACAGCAACCAAGTTAGGTA------GC--CAG
droSec2 scaffold_15:1383421-1383670 - TAC----------AA-----ATG-AA----AACTAAATGAAAGAATGAA-A------------------------------------------AGGAAAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATTTT------C-GAATACATTAA--------------TTTTTTT--T-GTCTA---TTATGAA------------AGGG-----GAGTTTTTACCT----ATCGGA----AGGAGATTTCTTTAGGCATATATA-TAA-----------AATGAAG--------------------------CG------AAGTTGT---TT--TTTCTTC-AATTGTTA-GGCGC--GTA--AAAATTA-AAGA--GAGAGACA---ACAGCAACCCAGTTAGGTA------GC--CAG
dm3 chrX:10685796-10686050 - TAC----------AA-----ATG-AA----AACTAAATGAATGAAAGAA-A------------------------------------------GAGAAAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATTTT------C-GAATACATTAA------TT----TTTTTTTTT--T-GTCTA---TTATGAA------------AGGG-----GAGTTTTTACCT----ATCGGA----AGGAGATTTCTTTAGGCATATACA-TAA-----------AATGAAG--------------------------CG------AAGTTGT---TT-TTTTCTTC-AATTGTTA-GGCGC--GTA--AAAATTA-AAGA--GCGAGACA---GCAGCAACCAAGTTAGGTA------GC--CAG
droEre2 scaffold_4690:4444387-4444618 + TAC----------AA-----AAGGAA----AACTAAATGAAAG----AA-A------------------------------------------GGGAAAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAT--TTTTATTATTTT------C-TAATACATTAA--------------TTTTTTT--T-GTCTA---TTATGAG------------AGGG-----GAGTTTTTACCT----ATCGGA----A---GATTTCTTTAGGCATATACA-TAA-----------AATGAAG--------------------------CG------AAGTTGT---TT--TTTCTTC-AATTGTTA-GGCGC--GTG--AAAATTA-AAGA--GCGAGACA---GCAGCAGCCA--------------------AG
droYak3 X:19255658-19255887 - TAC----------AA-----AGG-AA----AACTAAATGAAAG----GA-A------------------------------------------GGGATAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATTTT------C-TAATACATT---------------ATTTTTTT--T-GTCTA---TTATGAG------------AGGG-----GAGTTTTTACCT----ATCGGA----A---GATTTCTTTAGGCATATACA-TAA-----------AATGAAG--------------------------CG------AAGTTGT---TT-TTTTCTTC-AATTGTTA-GGCGC--GTA--AAAATTA-AAGA--GCGAGACA---GCAG-------------TA------GC--CAG
droEug1 scf7180000409901:7459-7733 - TAC----------AA-----AGGAGA----AACTAATCGAGAG----GA-A------------------------------------------GGGAAAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATTTT------T-TAAACGATAT---ATAC------TTTTTTTTT--T-GTCTA---TTATGAG-----------GAGGG-----GAATTTTTACCT----ATCGGA----TGGAGTTTTCTTTAGGCATATACA-AAA---AC---AAAAACAAAA--A---A---GAAACAAGAA---------GGATGGAATTGTTTTTT-TTTTCTTC-AATTGTTA-GGCGC--GTA--GAAGTTA-GAAA----GAGACA---GCAGCAGCAGAGACAGAGG------GA--AAG
droBia1 scf7180000302126:3624235-3624483 - TAC----------AA-----AGG-AA----AACTAAACGAAAA----GGAA------------------------------------------GGG-AAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATTTT------G-TAAAACAC-----------------TTTTTTT--T-GTCTT---TTATGAG------------AGGG-----GATTTTTTACCT----ATCGGA----AGGAGTTTTCTTTAGGCATATACAAAAC--------AAAAACAAAA--------------------------CG------GAGTTGT---TT-TTTTCCTC-AATTGTTA-GGCGC--GTG--AGAGTTG-GAGAAAGCG-GACC---GCAGCAGCCGAGTCAGGTA------GC--CAG
droTak1 scf7180000415394:525485-525724 - TAC----------AA-----AGG-AA----AACTAAACGAAAG----GA-A------------------------------------------GGGAAAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATTTT-----TT-TA-AAT------------------ATTTTTTT--T-GTCTA---TTATGAG------------AGTG-----GAAA-TTTACCT----ATCGGA----AGGAGTTTTCTTTAGGCATATACA-AAA---------------AAA--------------------------CC------GAGTTGT---TTTTTTTCTTC-AATTGTTA-GGCGC--GTA--AAAGTTA-GAGC----GAGACAGCAGCAGCAGCCGAATTAGGTA------GC--CAG
droEle1 scf7180000490214:690905-691144 + TAC----------AA-----AGG-AA----AACTAAACGAAAA----GA-A------------------------------------------GGGAAAAACGTTTTTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATTTT-----TT-TAAAACA------------------TTTTTTT--T-GTCTA---TTATGAG------------AAGG-----GA--TTTTACCTACATATTGAA----AGGAGTTTTCTTTAGGCATATACA-TAC-----------AA--AAA--------------------------C--------AGTTTT---TT--TTTCTTC-AATTGTTA-GGCGC--GTA--AAAGTTA-GAGA--G--CAACA---GCAGCAGCCGATGAAGGTA------GC--CAG
droRho1 scf7180000761121:59906-60146 + TAC----------AA-----AGG-AA----AACTAAACGAAAT----GA-A------------------------------------------AGGAAAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATTTT-----TT-TA-AATA-----------------TTTTTTTT--C-GTCTA---TTATGAG------------AAGG-----CA--TTTTACCTAAATATTGAA----AGAATTTTTCTTTAGGCATATACA-TAC-----------AA-AAAA--------------------------CA------GAGTTGT---TT---TTTTTC-AATCGTTA-GGAGC--GTA--AAAGCTA-GTGA--G--CAACA---GCATCAGCCGAGGTAGGAA------GC--CAG
droFic1 scf7180000453882:539635-539875 - TAC----------AA-----AGG-AA----AACTAAACGAAAG----AA-A------------------------------------------GGGAAAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATTTT-----TT-TAAAACAT----------------TTTTTTTT--T-GTCTA---TTATGAG------------AAGG-----GA-TTTTTACCT----ATCGGA----TGGAGTTTTCTTTAGGCATATACA-AAA-----------A---AAA--------------------------CG------GAGTTGT---TTATTTTCTTC-AATTGTTA-GGCGC--GTA--AAAGTTA-GAGA--G--CGACA---AAAGCAGCCGAATTAGGTA------GC--CAG
droKik1 scf7180000302517:172210-172482 - TAC----------AA-----AGGAGA----AACTAAGCGAAAG----AA-A------------------------------------------GGGAAAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATATT------A-T-------TATTT-TTTTTCGT--A-TGTTTT--C-GTCTA---TTATGAG------------AAGG-----GATTTTTAACCT----ATTGAAAGGAAGGAGTTTTCTTAAGGCATATACA-CAA---GA---AAAA--AAAACAA---A---AAACTAAAACGGAAAACT------GAG--GT---TT--GTTTTTT-AATTGTTA-GGCAC--TTA--AAAGTTG-GATA----GAGACA---GTAGAAAGCCAGACAGAGA------AG--GAG
droAna3 scaffold_13417:1281348-1281632 - TATAAATATTTACAA-----AAG--G----AACTAGGCGAGAG--TGGA-A------------------------------------------GGG-ATAACGTTTTTTAGCGGTACAAACA---TGAGTACAAATCAAGA-GTTTATTATTATAATT--T-TAAAACATAT---ATACTTC----ATTTTTTTCGT-GTCTA---TTATGAA------------AAAA-----GAAT-TTTACCT----ATTGAA------GAGTTTTCTTAAGGCATATACT-TAAA--AAAAAAAAAACAAAACAAAGAAATTAAACTAAAAA---------AGATGAAG--GA---TT--ATTTTTC-AATTGTTA-GGCGC--ATG--AAG------AGA--GCGA-------------------TTGAGAGGAGAGGAAGAGCA
droBip1 scf7180000394795:1716-1991 + TAC----------AA-----AAG-AAAAAAAACTACGCGAATG----GA-A------------------------------------------AGGGATAACGTTTTTTAGCGGTACAAACA---TGAGTACAAATCAAGA-GTTTATTATTATAATTT-TTAAAAACATAT---ATG-----TATTTTTTTTTCGT-GTCTA---TTATGAA------------AAAGAAAATGAATTTTTACCT----ATTGAA----GAGTTTTTTCTTAAGGCATATACT-TAAAAAAC---AAG---------A---A---AAACTAAAAAGAAAA-AGGAGATAAAG--GT---TA--ATTTTTC-AATTGTTA-GGCGC--ATG--AGAGTCACAAGA--GCGA---------------------AGAAA------GC--AAG
droPer2 scaffold_13:959287-959595 - TAT----------ATAACAAAGA-AA----AACAAAAAGATAA----AA-AGGAAACGTAAAAGTAAAAGTAAAGGAAGAAAATTGAAGAGAGAAAGAAAACGTT-TTTAGCGGTACAAACA---CGAGTACAAATCAAGAGTTTTATTATTAT------T-GTATTTTTTAT------TTCGAATCTTTTTTTGGTCATCTACATCTATGAG------------AATG-----GAGT-TTTACAT----GTTTAA----ATGAAAGTTTTTAAGCCATT-ACTATAC-----------GAGGAAA--------------------------TA------TGGGAGAT--TT--GTTTTTCAAATTGTTAAGGCAC--T----AAGGCAG-GAAT--GCAGGAAG---GCAGGAGATAGATAGGGAG------GT--GAG
droVir3 scaffold_12970:10276983-10277137 - TAC----------AT------------------------------------------------------------------------------------AAAGTT-TTTAGCGGTACAAACATCGTGAGTACAAATCAAT--ATTTATTTTTTT------T-TTGTTTT-TT--------------TTTTTTTT--T-GTCTA---TTATAAA------------AA-------GAATTT--------------------AGGGATTTTCTT-AAACATAAA---------------------------------------------------------------AT---T---TGTTTTC-AATTGTTA-GGCGA--GTG--AATGTTT-GAAA--G------------------------------------------
droMoj3 scaffold_6473:11179699-11179896 + TAC----------AT------------------------------------------------------------------------------------AACGTT-TTTAGCGGTACAAACATCGTGAGTACAAATCAAT--ATTTATTTTGTT-----TT-T---TCGT----------------TTGTTTTT--T-GTCTA---TTATAAAGAAGTAACGAGAAGAA-----GAATTT--------------------AGG-GATTTCCTCAAA---------------ACAAAAAAAAAAAAA--------------------------CA------AAAATAT---TT--TGTTTTC-AATTGTTA-GGCGACAGTGAAAAAGTTT-T------CGA-------------------AGAAAAA------AG--AAA
droGri2 scaffold_15203:6571462-6571620 - TAC----------AT------------------------------------------------------------------------------------AAAGTT-TTTAGCGGTACAAACATCGTGAGTACAAATCAAT--TATTAATTTTTT------T-TTTTTTTTTGT--------------TTTTTTT--T-TCCTA---TTATAAA------------AA-------GAATTT--------------------A-GGGATTTCCTTAAACATGAA---------------------------------------------------------------AT---T---TGTTTTC-AATTGTTA-GGCGA--GTG--AAAGTTA-GAAA--A-------------------------GAT--------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TAC----------AA-----ATG-AA----AACTAAATGAAAGAATGAA-A------------------------------------------AGGAAAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATTTT------C-GAATACATTAA--------------TTTTTTT--T-GTCTA---TTATGAA------------AGGG-----GAGTGTTTACCT----ATCGGA----AGGAGATTTCTTTAGGCATATACA-TAA-----------AATGAAG--------------------------CG------AAGTTGT---TT--TTTCTTC-AATTGTTA-GGCGC--GTA--AAAATTA-AAGA--GAGAGACA---ACAGCAACCAAGTTAGGTA------GC--CAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................TGAAAGAATGAA-A------------------------------------------AGGAAAAACGTT-..............................................................................................................................................................................................................................................................................................................................................2515.00500000003002000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTA-AAGA--GAGAGACA---ACAGCAACCAAGT...................2815.00500000000001040000
........................................................................................................................................................................................................................................................................................TACA-TAA-----------AATGAAG--------------------------CG------AAGTTGT---T.........................................................................................2414.00400000021100000000
.................................................................................................................................TACAAATCAAG--TTTTATTATTTT------C-GAA...................................................................................................................................................................................................................................................................................2714.00400000004000000000
........................................................................................................................................................................................................................................................................................TACA-TAA-----------AATGAAG--------------------------CG------AAGTTGT---TT--T.....................................................................................2614.00400000022000000000
.....................................................................................................................................................................................................................................................T----ATCGGA----AGGAGATTTCTTTAGGCATA................................................................................................................................................................2713.00300000020000010000
................................................................................................................................................................................................................................................TTACCT----ATCGGA----AGGAGATTTCTTT.......................................................................................................................................................................2513.00300000000003000000
....................................................................................................................................................................................................................................................................................................................................................................................................TA-AAGA--GAGAGACA---ACAGCAACCAAGT...................2713.00300000000001011000
....................................................................................................................................................................................................................................................................................................................................................................TCTTC-AATTGTTA-GGCGC--GTA--AAAAT....................................................2613.00300000021000000000
.................................................................................................................................................................................................................................................TACCT----ATCGGA----AGGAGATTTCTTT.......................................................................................................................................................................2413.00300000000003000000
.....................................TGAAAGAATGAA-A------------------------------------------AGGAAAAACGTT-T.............................................................................................................................................................................................................................................................................................................................................2612.00200000000011000000
............................................................................................................................................................................................TTTTTT--T-GTCTA---TTATGAA------------AGGG-----GA............................................................................................................................................................................................................2512.00200000011000000000
...........................................................................................................................................................................................................................................................TCGGA----AGGAGATTTCTTTAGGCATA................................................................................................................................................................2512.00200000010000010000
.....................................................................................................................................................................................................................................................T----ATCGGA----AGGAGATTTCTTTAGGCAT.................................................................................................................................................................2612.00200000000010010000
...............................................................................................................................................................................................................................................................................................................................................................T--TTTCTTC-AATTGTTA-GGCGC--..............................................................2112.00200200000000000000
.............................................................................................................................................................................................................................................TGTTTACCT----ATCGGA----AGGAGATT............................................................................................................................................................................2312.00220000000000000000
.............................................................................................................................................................................................................................................................................................TAA-----------AATGAAG--------------------------CG------AAGTTGT---TT--TTTCTT................................................................................2712.00200000010001000000
.........................................................................................................................................................................................................................................................................................................................................................GT---TT--TTTCTTC-AATTGTTA-GGCGC--..............................................................2412.00200200000000000000
..........................................................................................................................................................................................................................................................ATCGGA----AGGAGATTTCTTTAGGC...................................................................................................................................................................2312.00200200000000000000
......................................................................................................................................................................................................................................................................................................................................................................TTC-AATTGTTA-GGCGC--GTA--AAAAT....................................................2412.00200000000100010000
......................................................................................................................................................................................................................................................................................TATACA-TAA-----------AATGAAG--------------------------CG------AAGTTGT---T.........................................................................................2612.00200000002000000000
........................................................................................................................................................................................................................................................................................TACA-TAA-----------AATGAAG--------------------------CG------AAGTTGT---TT--......................................................................................2511.00100000000100000000
....................................................................................................................................................................................................................................................................................................................................................................TCTTC-AATTGTTA-GGCGC--GTA--AAAATA...................................................2711.00100000000000010000
...................................................................................................................................................................................................................................................................................................................................................................TTCTTC-AATTGTTA-GGCGC--GTA--.........................................................2211.00100000001000000000
....................................ATGAAAGAATGAA-A------------------------------------------AGGAAAAACGTT-..............................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................TA-AAGA--GAGAGACA---ACAGCAACCA......................2411.00100000000000010000
........................................................................................................................................................................................................................................................................................................................................................TGT---TT--TTTCTTC-AATTGTTA-GGCGC--GT............................................................2711.00100000000000010000
..........................................................................................................................................................................................................................................................................TTTCTTTAGGCATATACA-TAA-----------AATGAT.......................................................................................................................................2711.00100000010000000000
......................................................................................................................................................................................................................................................................................TATACA-TAA-----------AATGAAG--------------------------CG------AAGTTGT---TT--T.....................................................................................2811.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................T--TTTCTTC-AATTGTTA-GGCGC--GTA--AA.......................................................2611.00100000000000010000
.................................................................................................................................................................................................T--T-GTCTA---TTATGAA------------AGGG-----GAGT..........................................................................................................................................................................................................2211.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................T---TT--TTTCTTC-AATTGTTA-GGCGC--GTA--.........................................................2611.00100000001000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................AGAGACA---ACAGCAACCAAGTTAGGTA------GC--...2811.00100000000100000000
.....................................................................................................................................................................................................................................................................................................................................................................................CGC--GTA--AAAATTA-AAGA--GAGA.......................................2111.00100010000000000000
...................................................................................................................................CAAATCAAG--TTTTATTATTTT------C-GAATACA...............................................................................................................................................................................................................................................................................2911.00100000000010000000
.............................................................................................................................................................................................TTTTT--T-GTCTA---TTATGAA------------AGGG-----GAGT..........................................................................................................................................................................................................2611.00100000010000000000
..............................................................................................................................................................................................TTTT--T-GTCTA---TTATGAA------------AGGG-----GAGTGTT.......................................................................................................................................................................................................2811.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................ATTA-AAGA--GAGAGACA---ACAGCAACCA......................2611.00100000000000010000
...................................................................................................................................................................................................................................................................................................................................................................TTCTTC-AATTGTTA-GGCGC--GTA--AAAAT....................................................2711.00100000000000010000
..........................................................................................................TTTAGCGGTACAAACA---TGAGTACAAA.................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
.....................................TGAAAGAATGAA-A------------------------------------------AGGAAAAACGT................................................................................................................................................................................................................................................................................................................................................2411.00100000000010000000
...............................................................................................................................................................................................................................................................................TTAGGCATATACA-TAA-----------AATGAAG--------------------------CG------A...................................................................................................2611.00100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................C-AATTGTTA-GGCGC--GTA--AAAATTA-AA...............................................2611.00100000000010000000
.................................................................................................................................................................................................................................................................................AGGCATATACA-TAA-----------AATGAAG--------------------------CG------AAGT................................................................................................2711.00100000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................AAAATTA-AAGA--GAGAGACA---ACAGC...........................2411.00100010000000000000
.............................................................................................................................................................................................................................................TGTTTACCT----ATCGGA----AGGAGATTTC..........................................................................................................................................................................2511.00100000000001000000
............................................................................................................................................................................................................................................................CGGA----AGGAGATTTCTTTAGGCATATACA-...........................................................................................................................................................2811.00100000010000000000
.............................................................................................................................................................................................................................................................................................................................................................................TGTTA-GGCGC--GTA--AAAATTA-AAGA--G..........................................2511.00100000000010000000
....................................................................................................................................................................................................................................................................................................................................................................TCTTC-AATTGTTA-GGCGC--GTA--A........................................................2211.00100000000000010000
....................................................................................................................................................................................................................................................................................................................................................................TCTTC-AATTGTTA-GGCGC--GTA--AAAA.....................................................2511.00100000001000000000
........................................................................................................................................................................................................................................................................................................................................................TGT---TT--TTTCTTC-AATTGTTA-GGCGC--..............................................................2511.00100000000000010000
.........................................................................................................................................................................................................TA---TTATGAA------------AGGG-----GAGTGTTTACCT----ATC...........................................................................................................................................................................................2811.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTA-AAGA--GAGAGACA---ACAGCAACCA......................2511.00100000000000010000
.......................................................................................................................................................................................................................................................................................................................................................................TC-AATTGTTA-GGCGC--GTA--AAAAT....................................................2311.00100000000000010000
...........................................................................................................................................................................................................................................................................TTCTTTAGGCATATACA-TAA-----------AATGA........................................................................................................................................2511.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................TC-AATTGTTA-GGCGC--GTA--AAAATTA-AAGA--...........................................2911.00100000010000000000
......................................................................................................................AACA---TGAGTACAAATCA..............................................................................................................................................................................................................................................................................................................1711.00100000000001000000
.............................................................................................................................................................................................................................................TGTTTACCT----ATCGGA----AGGAGATTTCTT........................................................................................................................................................................2711.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AAGA--GAGAGACA---ACAGCAACCAAGTT..................2611.00100000000000010000
..................................................................................................................................................................................................................................................................................................................................................................................................ATTA-AAGA--GAGAGACA---ACAGCAACCAAGT...................2911.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................TCTTC-AATTGTTA-GGCGC--GTA--AA.......................................................2311.00100000001000000000
.............................................................................................................................................................................................................................................................................................TAA-----------AATGAAG--------------------------CG------AAGTT...............................................................................................1711.00100000000001000000
..........................................................................................................................................................................................................................................................................................CA-TAA-----------AATGAAG--------------------------CG------AAGTTGT---TT--TT....................................................................................2511.00100000000100000000
..................................................................................................................................................................................................................................................................................................................................................................TTTCTTC-AATTGTTA-GGCGC--GTA--AAAAT....................................................2811.00100000000000010000
....................................................................................................................................................................................................................................................................................................................................................................TCTTC-AATTGTTA-GGCGC--GTA--AAAATT...................................................2711.00100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TA--AAAATTA-AAGA--GAGAGACA---ACAGC...........................2611.00100010000000000000
...........................................................................................................................................................................................TTTTTTT--T-GTCTA---TTATGAA------------AGGG-----GA............................................................................................................................................................................................................2611.00100000000100000000
................................................................................................................................................................................................................................................TTACCT----ATCGGA----AGGAGATTTCTTTA......................................................................................................................................................................2611.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................ATTA-AAGA--GAGAGACA---ACAGCAACCAAG....................2811.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................TGTTA-GGCGC--GTA--AAAATTA-AAGA--GAA........................................2711.00100000000000001000
TAC----------AA-----ATG-AA----AACTAAATGAAAGA............................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000010000000
......................................................................................................................................................................................................................................................................................................................................................................TTC-AATTGTTA-GGCGC--GTA--AAAATT...................................................2511.00100000010000000000
..................................................................................................................TACAAACA---TGAGTACAAATCAAG--T.........................................................................................................................................................................................................................................................................................................2411.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................C-AATTGTTA-GGCGC--GTA--AAAATTA-AAGA--G..........................................2911.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TA--AAAATTA-AAGA--GG.........................................15200.05100000001000000000
droSec2
TAC----------AA-----ATG-AA----AACTAAATGAAAGAATGAA-A------------------------------------------AGGAAAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATTTT------C-GAATACATTAA--------------TTTTTTT--T-GTCTA---TTATGAA------------AGGG-----GAGTTTTTACCT----ATCGGA----AGGAGATTTCTTTAGGCATATATA-TAA-----------AATGAAG--------------------------CG------AAGTTGT---TT--TTTCTTC-AATTGTTA-GGCGC--GTA--AAAATTA-AAGA--GAGAGACA---ACAGCAACCCAGTTAGGTA------GC--CAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACCCAGTTAGGT..............1812.0020020
..........................................................................................................TTTAGCGGTACAAACA---TGAGT......................................................................................................................................................................................................................................................................................................................2111.0010010
....................................ATGAAAGAATGAA-A------------------------------------------AGGA.......................................................................................................................................................................................................................................................................................................................................................1811.0010010
.......................................................................................................................ACA---TGAGTACAAATCAAG--T.........................................................................................................................................................................................................................................................................................................1911.0010010
...............................................................................................................................................................................................TTT--T-GTCTA---TTATGAA------------AGGG-----GA............................................................................................................................................................................................................2211.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................GAGAGACA---ACAGCAACCCAGTTAGGT..............2611.0010010
................................................................................................................................................................................................TT--T-GTCTA---TTATGAA------------AGGG-----GAGTTT........................................................................................................................................................................................................2511.0011000
....................................ATGAAAGAATGAA-A------------------------------------------AGGAAAAA...................................................................................................................................................................................................................................................................................................................................................2211.0010010
....................................................................................................................................................................................................................................................................................................................................................................TCTTC-AATTGTTA-GGCGC--GTA--AAA......................................................2411.0011000
..........................................................................................................................................................................................................................................................................................................................................................................................GTA--AAAATTA-AAGA--GAGAGAC....................................2111.0010010
................................................................................................................................................................................................................................................................................................................................................................................................AAATTA-AAGA--GAGAGACA---ACAGC...........................2311.0010100
TAC----------AA-----ATG-AA----AACTAAATGAAAGAA...........................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
..........................................................................................................................................................................................................................................GAGTTTTTACCT----ATCGGA----AGGAGATT............................................................................................................................................................................2611.0010100
......................................................................................................GTT-TTTAGCGGTACAAAC...............................................................................................................................................................................................................................................................................................................................1811.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................A---ACAGCAACCCAGTTAGGT..............1911.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................A---ACAGCAACCCAGTTAGG...............1811.0010010
...............................................................................................................................................................................................................................................................................................A-----------AATGAAG--------------------------CG------AAGTTGT---TT--TTTCTT................................................................................2511.0010010
............................................................................................................................................................................................................................................GTTTTTACCT----ATCGGA----AGGAGA..............................................................................................................................................................................2211.0010100
dm3
TAC----------AA-----ATG-AA----AACTAAATGAATGAAAGAA-A------------------------------------------GAGAAAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATTTT------C-GAATACATTAA------TT----TTTTTTTTT--T-GTCTA---TTATGAA------------AGGG-----GAGTTTTTACCT----ATCGGA----AGGAGATTTCTTTAGGCATATACA-TAA-----------AATGAAG--------------------------CG------AAGTTGT---TT-TTTTCTTC-AATTGTTA-GGCGC--GTA--AAAATTA-AAGA--GCGAGACA---GCAGCAACCAAGTTAGGTA------GC--CAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................TA-AAGA--GCGAGACA---GCAGCAACCAAG....................261169.001690000000000000000000000000000000000000000000010010000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000110000030000000000000000000000000000000000000200000120000000000400000100000000000000000000000000000000000000000000000000000010000000000000002000000000011000041001200001000000234211600000
..............................................................................................................................................................................................................................................TTTTACCT----ATCGGA----AGGAGATTTCTT........................................................................................................................................................................261148.00148000000000000000000000000000000000000001000000002140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010002000000000000000000000000000000000000010060005000000020000000020010000100000000000000000000000000000000000000000000000000000000000000000000001001600001012010000001000010209200000
.........................................................................................................................................................................................................TA---TTATGAA------------AGGG-----GAGTTTTTACC...................................................................................................................................................................................................241102.0010200000000000000000000000000000000000010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000301000000000000000000000000000000000000000000000000000000000000000000000000000400000010000000000000001208600000
................................................................................................................................................................................................................................................TTACCT----ATCGGA----AGGAGATTTCTT........................................................................................................................................................................24188.008800000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001030000000000000000000000000000000100000000000600000000000100001011101000200000000010000000000000000000000000000000000000000000000000000000000100400000200000000000000001115500000
....................................................................................................................................................................................................................................................................................................................................................................................................TA-AAGA--GCGAGACA---GCAGCAACCAAGT...................27180.008000000000000000000000001000000000000000000000000000000000000000000000000000000423400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000001000000000000000000000000000000000000000000000000000000000000010000000120600001010000000000000000104900000
...............................................................................................................................................................................................................................................TTTACCT----ATCGGA----AGGAGATTTCTT........................................................................................................................................................................25173.007300000000000000000000000100000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101001000000000000000000000000000000000000000004000000001000000000000001000000000000000000000000000000000000000000000000000000000000001000010000000010600000200000000000000011214500000
...................................................................................................................................................................................................................................................................................................................................................................................................TTA-AAGA--GCGAGACA---GCAGCAACCAAG....................27170.007000000000000000000000000000000000000000010000000100000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000010000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100010000000000000125500000
.............................................................................................................................................................................................................................................TTTTTACCT----ATCGGA----AGGAGATTTCTT........................................................................................................................................................................27143.004300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001120000000000000000000000000000000000000000001000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000010000001000300000001000000000000000002901000
..............................................................................................................................................................................................................................................TTTTACCT----ATCGGA----AGGAGATTTCTTT.......................................................................................................................................................................27139.003900000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000001000001200000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000003000000
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...........................................................................................................TTAGCGGTACAAACA---TGAGTACAAAT................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................T-TTTAGCGGTACAAACA---TGAGTACAAA.................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................ATACA-TAA-----------AATGAAG--------------------------CG------AAGTTGT---TT-T......................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................TTTTCTTC-AATTGTTA-GGCGC--GT............................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................T-TTTAGCGGTACAAACA---TGAGTACA...................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.............................................................................................................................................................................................................................................................................................................................................................................TGTTA-GGCGC--GTA--AAAATTA-AAGA--G..........................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................GCGGTACAAACA---TGAGTACA...................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TAAATGAATGAAAGAA-A------------------------------------------GAGAAAAACGT................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
........................................................................................................................................................................................................................................................................................................................................................................................................AGA--GCGAGACA---GCAGCAACCAAGTTAGG...............2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................TTCTTC-AATTGTTA-GGCGC--GTA--AAA......................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................AAGA--GCGAGACA---GCAGCAACCAAGT...................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000
.............................................................................................................................................................................................................................................TTTTTACCT----ATCGGA----AGGAGATTTCTTT.......................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................GATTTCTTTAGGCATATACA-TAA-----------AATGA........................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................TTTACCT----ATCGGA----AGGAGATTTCT.........................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................TA---TTATGAA------------AGGG-----GAGTTTTTAC....................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................TGAATGAAAGAA-A------------------------------------------GAGAAAAACGTT-TT............................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................A-----------AATGAAG--------------------------CG------AAGTTGT---TT-TTTTCTT................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................GAATGAAAGAA-A------------------------------------------GAGAAAAACGT................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................AA------------AGGG-----GAGTTTTTACCT----ATCGGA----....................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................ATCGGA----AGGAGATTTCTTTAGGC...................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TGAA------------AGGG-----GAGTTTTTACCT----ATCG..........................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.................................................................................................................................................................................................T--T-GTCTA---TTATGAA------------AGGG-----GAGTTTTT......................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..............................................................................................................................................................................................................TTATGAA------------AGGG-----GAGTTTTTACCT----ATCGGA----....................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................G-AA----AACTAAATGAATGAAAGAA-A------------------------------------------GAGA.......................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATTGTTA-GGCGC--GTA--AAAATTA-AAGA--GC.........................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................T-TTTTCTTC-AATTGTTA-GGCGC--GTA--A........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................A-AAGA--GCGAGACA---GCAGCAACCAA.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................TG-AA----AACTAAATGAATGAAAGAA-A------------------------------------------GAGAA......................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GGCATATACA-TAA-----------AATGAAG--------------------------C...........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................GTTTTTACCT----ATCGGA----AGGAGATTTCTTTA......................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................GAGTTTTTACCT----ATCGGA----AGGAGATTTC..........................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................TTTT------C-GAATACATTAA------TT----TTTTTTTTT--T-..................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TTCTTC-AATTGTTA-GGCGC--GTA--AAAATT...................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TT-TTTAGCGGTACAAACA---TGAGTACAA..................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................AATGAAG--------------------------CG------AAGTTGT---TT-TTT....................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................AGTTTTTACCT----ATCGGA----AGGAG...............................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................TTTTTTTT--T-GTCTA---TTATGAA------------AGG....................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................CCT----ATCGGA----AGGAGATTTC..........................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................TAGGCATATACA-TAA-----------AATGAAG--------------------------CG------AA..................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................GACA---GCAGCAACCAAGTTAGGTA------GC--...2511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TA---TTATGAA------------AGGG-----GAGTTTTTACCT----..............................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................A------------AGGG-----GAGTTTTTACCT----ATCGGA----AGGA................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................CGTT-TTTAGCGGTACAAACA---TGA........................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TC-AATTGTTA-GGCGC--GTA--AAAATTA-AAA..............................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................ATTTCTTTAGGCATATAC.............................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................TTT--T-GTCTA---TTATGAA------------AGG....................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................TGAATGAAAGAA-A------------------------------------------GAGAAAAACGTT-TTT...........................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.............................................................................................................................................................................................TTTTT--T-GTCTA---TTATGAA------------AGGG-----GAG...........................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................TATTTT------C-GAATACATTAA------TT----TTTTTTT........................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................GT---TT-TTTTCTTC-AATTGTTA-GGCGC--GTA--.........................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................AGAAAAACGTT-TTTAGCGGTAC...................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................TTTACCT----ATCGGA----AGGAGA..............................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AATGAATGAAAGAA-A------------------------------------------GAGAAAAACGT................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TGT---TT-TTTTCTTC-AATTGTTA-GGCGC--G.............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GAATGAAAGAA-A------------------------------------------GAGAAAAACGTT-..............................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TTTATTATTTT------C-GAATACA...............................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TGAAAGAA-A------------------------------------------GAGAAAAACGTT-TTTTTT........................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................GAGAAAAACGTT-TTTAGCGGTACAAACA---...........................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................T----ATCGGA----AGGAGATTTCTTTAGGCAATC...............................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................ATCGGA----AGGAGATTTCTTTAGGCAT.................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................C-AATTGTTA-GGCGC--GTA--AAAATTA-AA...............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................TT--T-GTCTA---TTATGAA------------AGGG-----G.............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................TAGCGGTACAAACA---TGAGTACA...................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................................................................AGA--GCGAGACA---GCAGCAACC.......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TT------C-GAATACATTAA------TT----TTTTTTTTT--....................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ACTAAATGAATGAAAGAA-A------------------------------------------GAGAAAAA...................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................GAGTTTTTACCT----ATCGGA----AGGAGATT............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................TTTT--T-GTCTA---TTATGAA------------AGGG-----GAGTT.........................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................A----AACTAAATGAATGAAAGAA-A------------------------------------------GA.........................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GAATGAAAGAA-A------------------------------------------GAGAAAAA...................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TTTTTTT--T-GTCTA---TTATGAA------------AGGG-----GAG...........................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................AACTAAATGAATGAAAGAA-A------------------------------------------GAGAA......................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................AAGA--GCGAGACA---GCAGCAAC........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................T---TT-TTTTCTTC-AATTGTTA-GGCGC--GT............................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................AGGAGATTTCTTTAGGCATA................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................T-GTCTA---TTATGAA------------AGGG-----GAGTTTTT......................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................ACCT----ATCGGA----AGGAGATTTCTTTAGGC...................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TACAAACA---TGAGTACAAATCAAG--T.........................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................TCGGA----AGGAGATTTCTTTAGGCATATACA-T..........................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TTAGGCATATACA-TAA-----------AATGAAG--------------------------CG------AA..................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TGTTA-GGCGC--GTA--AAAATTA-AAGA--GCGAG......................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................AGGAGATTTCTTTAGGCATATACA-TA.........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TTAGGCATATACA-TAA-----------AATGAAG--------------------------CG------AAA.................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................TTTCTTTAGGCATATACA-TAA-----------AATGA........................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................ATCGGA----AGGAGATTTCTTTAGGCATA................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................ACAAATCAAG--TTTTATTATTTT------C-GA....................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TAC----------AA-----AAGGAA----AACTAAATGAAAG----AA-A------------------------------------------GGGAAAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAT--TTTTATTATTTT------C-TAATACATTAA--------------TTTTTTT--T-GTCTA---TTATGAG------------AGGG-----GAGTTTTTACCT----ATCGGA----A---GATTTCTTTAGGCATATACA-TAA-----------AATGAAG--------------------------CG------AAGTTGT---TT--TTTCTTC-AATTGTTA-GGCGC--GTG--AAAATTA-AAGA--GCGAGACA---GCAGCAGCCA--------------------AGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................TA-AAGA--GCGAGACA---GCAGCAGCCA--------------------AG2612.0022000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTA-AAGA--GCGAGACA---GCAGCAGCCA--------------------AG2712.0022000000
................................................................................................................................................................................................................................................TTACCT----ATCGGA----A---GATTTCTTT.......................................................................................................................................................................2211.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................G--AAAATTA-AAGA--GCGAGACA---GCAGC...........................2511.0011000000
.............................................................................................................................................................................................................................................TTTTTACCT----ATCGGA----A---GATTTCTTT.......................................................................................................................................................................2511.0011000000
...............................................................................................................................................................................................................TATGAG------------AGGG-----GAGTTTTTACCT----ATCGGA----....................................................................................................................................................................................2811.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................A-AAGA--GCGAGACA---GCAGCAGCCA--------------------AG2511.0010001000
............................................................................................................................................................................................................................................GTTTTTACCT----ATCGGA----A---GATTTCTTTAGG....................................................................................................................................................................2911.0010100000
................................................................................................................................................................................................................................................TTACCT----ATCGGA----A---GATTTCTT........................................................................................................................................................................2111.0010000100
........................................................................................................................................................................................................................................................................................TACA-TAA-----------AATGAAG--------------------------CG------AAGTTGT---TT--TT....................................................................................2711.0011000000
........................................................................................................................................................................................................................................................................................TACA-TAA-----------AATGAAG--------------------------CG------AAGTTGT---TT--T.....................................................................................2611.0011000000
...............................................................................................................................................................................................................................................TTTACCT----ATCGGA----A---GATTTCT.........................................................................................................................................................................2111.0011000000
......................................................................................................GTT-TTTAGCGGTACAAACA---TGAGT......................................................................................................................................................................................................................................................................................................................2411.0011000000
...........................................................................................................................................................................................................................................................TCGGA----A---GATTTCTTTAGGCATATACA-...........................................................................................................................................................2611.0011000000
...................................AATGAAAG----AA-A------------------------------------------GGGAAAAAC..................................................................................................................................................................................................................................................................................................................................................2011.0010100000
................................................................................................................................................................................................TT--T-GTCTA---TTATGAG------------AGGG-----GAGTTTT.......................................................................................................................................................................................................2611.0011000000
..............................................................................................................................................................................................................................................TTTTACCT----ATCGGA----A---GATTTCTTT.......................................................................................................................................................................2411.0011000000
..............................................................................................................................................................................................................................................................................................................................................................TT--TTTCTTC-AATTGTTA-GGCGC--..............................................................2211.0011000000
......................................................................................................................................................................................................................................................................................TATACA-TAA-----------AATGAAG--------------------------CG------AAGTTGT---T.........................................................................................2611.0011000000
....................................................................................................................................................................................................................G------------AGGG-----GAGTTTTTACCT----ATCGGA----A---GATT............................................................................................................................................................................2811.0010000001
.........................................................................................................................................................................................................................................................................................................................................................................................................GA--GCGAGACA---GCAGCAGCCA--------------------AG2211.0010001000
............................................................................................................TAGCGGTACAAACA---TGAGTACAAATC...............................................................................................................................................................................................................................................................................................................2611.0011000000
.............................................................................................................................................................................................TTTTT--T-GTCTA---TTATGAG------------AGGG-----GAGTT.........................................................................................................................................................................................................2711.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................GTTA-GGCGC--GTG--AAAATTA-AAGA--GCGA.......................................2711.0010000010
.........................................................................................................................................................................................................TA---TTATGAG------------AGGG-----GAGTTTTTACC...................................................................................................................................................................................................2411.0011000000
droYak3
TAC----------AA-----AGG-AA----AACTAAATGAAAG----GA-A------------------------------------------GGGATAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATTTT------C-TAATACATT---------------ATTTTTTT--T-GTCTA---TTATGAG------------AGGG-----GAGTTTTTACCT----ATCGGA----A---GATTTCTTTAGGCATATACA-TAA-----------AATGAAG--------------------------CG------AAGTTGT---TT-TTTTCTTC-AATTGTTA-GGCGC--GTA--AAAATTA-AAGA--GCGAGACA---GCAG-------------TA------GC--CAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................................................................................................................TGT---TT-TTTTCTTC-AATTGTTA-GG...................................................................2311.00101000000000
...........................................................................................................................................................................................................................................................TCGGA----A---GATTTCTTTAGGCATATACA-...........................................................................................................................................................2611.00101000000000
..................................AAATGAAAG----GA-A------------------------------------------GGGATAAAC..................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
......................................................................................................GTT-TTTAGCGGTACAAACA---TGAGT......................................................................................................................................................................................................................................................................................................................2411.00100000010000
..........................................................................................................TTTAGCGGTACAAACA---TGAGTACAAA.................................................................................................................................................................................................................................................................................................................2611.00100000010000
...............................................................................................................................................................................................................................................................................TTAGGCATATACA-TAA-----------AATGA........................................................................................................................................2111.00100100000000
..........................................................................................................TTTAGCGGTACAAACA---TGAGT......................................................................................................................................................................................................................................................................................................................2111.00100100000000
.AC----------AA-----AGG-AA----AACTAAATGAAAG----G........................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
............................................................................................................TAGCGGTACAAACA---TGAGT......................................................................................................................................................................................................................................................................................................................1911.00100010000000
..................................................................................................................TACAAACA---TGAGTACAAATC...............................................................................................................................................................................................................................................................................................................2011.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................T-TTTTCTTC-AATTGTTA-GG...................................................................1911.00101000000000
..........................................................................................................TTTAGCGGTACAAACA---TGAGTA.....................................................................................................................................................................................................................................................................................................................2211.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................TGTTA-GGCGC--GTA--AAAATTA-AAGA--GCGA.......................................2811.00100000010000
.............................................................................................................................................................................................................................................................GGA----A---GATTTCTTTAGGCATA................................................................................................................................................................2011.00100100000000
...............................................................................................................................................................................................................................................TTTACCT----ATCGGA----A---GATTTCTTT.......................................................................................................................................................................2311.00100000010000
.............................................................................................................................................................................................TTTTT--T-GTCTA---TTATGAG------------AGGG-----..............................................................................................................................................................................................................2211.00100010000000
................................................................................................ATAAACGTT-TTTAGCGGTA....................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.....................................................................................................................................................................................................................................................................................ATATACA-TAA-----------AATGAAG--------------------------CG------AAGTT...............................................................................................2411.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................A--AAAATTA-AAGA--GCGAGACA---GCAG-------------TA------GC--...2811.00100000010000
droEug1
TAC----------AA-----AGGAGA----AACTAATCGAGAG----GA-A------------------------------------------GGGAAAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATTTT------T-TAAACGATAT---ATAC------TTTTTTTTT--T-GTCTA---TTATGAG-----------GAGGG-----GAATTTTTACCT----ATCGGA----TGGAGTTTTCTTTAGGCATATACA-AAA---AC---AAAAACAAAA--A---A---GAAACAAGAA---------GGATGGAATTGTTTTTT-TTTTCTTC-AATTGTTA-GGCGC--GTA--GAAGTTA-GAAA----GAGACA---GCAGCAGCAGAGACAGAGG------GA--AAGSizeHit CountTotal NormTotal
No Reads
droBia1
TAC----------AA-----AGG-AA----AACTAAACGAAAA----GGAA------------------------------------------GGG-AAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATTTT------G-TAAAACAC-----------------TTTTTTT--T-GTCTT---TTATGAG------------AGGG-----GATTTTTTACCT----ATCGGA----AGGAGTTTTCTTTAGGCATATACAAAAC--------AAAAACAAAA--------------------------CG------GAGTTGT---TT-TTTTCCTC-AATTGTTA-GGCGC--GTG--AGAGTTG-GAGAAAGCG-GACC---GCAGCAGCCGAGTCAGGTA------GC--CAGSizeHit CountTotal NormTotal
No Reads
droTak1
TAC----------AA-----AGG-AA----AACTAAACGAAAG----GA-A------------------------------------------GGGAAAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATTTT-----TT-TA-AAT------------------ATTTTTTT--T-GTCTA---TTATGAG------------AGTG-----GAAA-TTTACCT----ATCGGA----AGGAGTTTTCTTTAGGCATATACA-AAA---------------AAA--------------------------CC------GAGTTGT---TTTTTTTCTTC-AATTGTTA-GGCGC--GTA--AAAGTTA-GAGC----GAGACAGCAGCAGCAGCCGAATTAGGTA------GC--CAGSizeHit CountTotal NormTotal
No Reads
droEle1
TAC----------AA-----AGG-AA----AACTAAACGAAAA----GA-A------------------------------------------GGGAAAAACGTTTTTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATTTT-----TT-TAAAACA------------------TTTTTTT--T-GTCTA---TTATGAG------------AAGG-----GA--TTTTACCTACATATTGAA----AGGAGTTTTCTTTAGGCATATACA-TAC-----------AA--AAA--------------------------C--------AGTTTT---TT--TTTCTTC-AATTGTTA-GGCGC--GTA--AAAGTTA-GAGA--G--CAACA---GCAGCAGCCGATGAAGGTA------GC--CAGSizeHit CountTotal NormTotal
No Reads
droRho1
TAC----------AA-----AGG-AA----AACTAAACGAAAT----GA-A------------------------------------------AGGAAAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATTTT-----TT-TA-AATA-----------------TTTTTTTT--C-GTCTA---TTATGAG------------AAGG-----CA--TTTTACCTAAATATTGAA----AGAATTTTTCTTTAGGCATATACA-TAC-----------AA-AAAA--------------------------CA------GAGTTGT---TT---TTTTTC-AATCGTTA-GGAGC--GTA--AAAGCTA-GTGA--G--CAACA---GCATCAGCCGAGGTAGGAA------GC--CAGSizeHit CountTotal NormTotal
No Reads
droFic1
TAC----------AA-----AGG-AA----AACTAAACGAAAG----AA-A------------------------------------------GGGAAAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATTTT-----TT-TAAAACAT----------------TTTTTTTT--T-GTCTA---TTATGAG------------AAGG-----GA-TTTTTACCT----ATCGGA----TGGAGTTTTCTTTAGGCATATACA-AAA-----------A---AAA--------------------------CG------GAGTTGT---TTATTTTCTTC-AATTGTTA-GGCGC--GTA--AAAGTTA-GAGA--G--CGACA---AAAGCAGCCGAATTAGGTA------GC--CAGSizeHit CountTotal NormTotal
No Reads
droKik1
TAC----------AA-----AGGAGA----AACTAAGCGAAAG----AA-A------------------------------------------GGGAAAAACGTT-TTTAGCGGTACAAACA---TGAGTACAAATCAAG--TTTTATTATATT------A-T-------TATTT-TTTTTCGT--A-TGTTTT--C-GTCTA---TTATGAG------------AAGG-----GATTTTTAACCT----ATTGAAAGGAAGGAGTTTTCTTAAGGCATATACA-CAA---GA---AAAA--AAAACAA---A---AAACTAAAACGGAAAACT------GAG--GT---TT--GTTTTTT-AATTGTTA-GGCAC--TTA--AAAGTTG-GATA----GAGACA---GTAGAAAGCCAGACAGAGA------AG--GAGSizeHit CountTotal NormTotal
No Reads
droAna3
TATAAATATTTACAA-----AAG--G----AACTAGGCGAGAG--TGGA-A------------------------------------------GGG-ATAACGTTTTTTAGCGGTACAAACA---TGAGTACAAATCAAGA-GTTTATTATTATAATT--T-TAAAACATAT---ATACTTC----ATTTTTTTCGT-GTCTA---TTATGAA------------AAAA-----GAAT-TTTACCT----ATTGAA------GAGTTTTCTTAAGGCATATACT-TAAA--AAAAAAAAAACAAAACAAAGAAATTAAACTAAAAA---------AGATGAAG--GA---TT--ATTTTTC-AATTGTTA-GGCGC--ATG--AAG------AGA--GCGA-------------------TTGAGAGGAGAGGAAGAGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................CAAATCAAGA-GTTTATTATT................................................................................................................................................................................................................................................................................................2012.002020000
.........................................................................................................TTTTAGCGGTACAAACA---TGAGT......................................................................................................................................................................................................................................................................................................................2211.001010000
....................................................................................................................................................................................................................................................................................................................................................................TTTTC-AATTGTTA-GGCGC--ATG--AA.......................................................2311.001010000
...................................GGCGAGAG--TGGA-A------------------------------------------GGG-ATAACG.................................................................................................................................................................................................................................................................................................................................................2211.001000010
.....................................................................................................................................................................................................................................................................................................................................A---------AGATGAAG--GA---TT--ATTTTTC-..............................................................................2011.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................G------AGA--GCGA-------------------TTGAGAGGAGAGGAA.....2311.001010000
....................AAG--G----AACTAGGCGAGAG--T..........................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
............................................................................................................................................................................................................................................................................................................................................................................TTGTTA-GGCGC--ATG--AAG------AGA--GC.........................................2211.001000010
..............................................................................................................................................................................................................................................................................................................................................................................GTTA-GGCGC--ATG--AAG------AGA--GC.........................................2011.001100000
.......................................................................................................................................................................................................................................................................................................AAAAAACAAAACAAAGAAAA.............................................................................................................................20200.051010000
droBip1
TAC----------AA-----AAG-AAAAAAAACTACGCGAATG----GA-A------------------------------------------AGGGATAACGTTTTTTAGCGGTACAAACA---TGAGTACAAATCAAGA-GTTTATTATTATAATTT-TTAAAAACATAT---ATG-----TATTTTTTTTTCGT-GTCTA---TTATGAA------------AAAGAAAATGAATTTTTACCT----ATTGAA----GAGTTTTTTCTTAAGGCATATACT-TAAAAAAC---AAG---------A---A---AAACTAAAAAGAAAA-AGGAGATAAAG--GT---TA--ATTTTTC-AATTGTTA-GGCGC--ATG--AGAGTCACAAGA--GCGA---------------------AGAAA------GC--AAGSizeHit CountTotal NormTotal
No Reads
droPer2
TAT----------ATAACAAAGA-AA----AACAAAAAGATAA----AA-AGGAAACGTAAAAGTAAAAGTAAAGGAAGAAAATTGAAGAGAGAAAGAAAACGTT-TTTAGCGGTACAAACA---CGAGTACAAATCAAGAGTTTTATTATTAT------T-GTATTTTTTAT------TTCGAATCTTTTTTTGGTCATCTACATCTATGAG------------AATG-----GAGT-TTTACAT----GTTTAA----ATGAAAGTTTTTAAGCCATT-ACTATAC-----------GAGGAAA--------------------------TA------TGGGAGAT--TT--GTTTTTCAAATTGTTAAGGCAC--T----AAGGCAG-GAAT--GCAGGAAG---GCAGGAGATAGATAGGGAG------GT--GAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................AT------TTCGAATCTTTTTTTGGTC..................................................................................................................................................................................................................................................2116.006600000
............................................................................................................................................................................................................................................................................................ATAC-----------GAGGAAA--------------------------TA------TGGGA...............................................................................................1811.001001000
........................................................................................................................................................................................................CTACATCTATGAG------------AATG-----GA............................................................................................................................................................................................................1911.001001000
...........................................................................................................................................................................................................................................................................................................................................................................ATTGTTAAGGCAC--T----AAGGCAG-GAAT--GCA........................................2811.001001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAGATAGATAGGGAG------.......1811.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................C--T----AAGGCAG-GAAT--GCAGG......................................1811.001001000
................................................................................................................................................................................................................................................................................................................AA--------------------------TA------TGGGAGAT--TT--GTTT..................................................................................1811.001001000
........................................................................................................................................................................................................CTACATCTATGAG------------AATG-----G.............................................................................................................................................................................................................1811.001001000
.........................................................................................................................................................................TTAT------TTCGAATCTTTTTTTGGT...................................................................................................................................................................................................................................................2211.001000001
.............................................................................................................................................................................................................................................................................................TAC-----------GAGGAAA--------------------------TA------TGGGAGAT--TT--GTTTTT................................................................................2811.001010000
...................................AAAGATAA----AA-AGGAAACGTAA...........................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
...........................................................................................AGAAAGAAAACGTT-TTTAGCGGT.....................................................................................................................................................................................................................................................................................................................................2311.001000001
droVir3
TAC----------AT------------------------------------------------------------------------------------AAAGTT-TTTAGCGGTACAAACATCGTGAGTACAAATCAAT--ATTTATTTTTTT------T-TTGTTTT-TT--------------TTTTTTTT--T-GTCTA---TTATAAA------------AA-------GAATTT--------------------AGGGATTTTCTT-AAACATAAA---------------------------------------------------------------AT---T---TGTTTTC-AATTGTTA-GGCGA--GTG--AATGTTT-GAAA--G------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............T------------------------------------------------------------------------------------AAAGTT-TTTAGCGGTACAAACATCG...........................................................................................................................................................................................................................................................................................................................26154.005400102030410000000000100222131310000000007200000000000000000000000
...............................................................................................................................................................................................................TATAAA------------AA-------GAATTT--------------------AGGGATTTTCT.........................................................................................................................................................................25138.00380010101010200000000000001581121120000001000000000000000000000000
....................................................................................................................................................................................................T-GTCTA---TTATAAA------------AA-------GAATTT--------------------AGGGA...............................................................................................................................................................................26126.0026000000000100000000000000149801110000000000000000000000000000000
....................................................................................................................................................................................................T-GTCTA---TTATAAA------------AA-------GAATTT--------------------AGGGATT.............................................................................................................................................................................28122.0022000010000000001000000000039510000000002000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TTC-AATTGTTA-GGCGA--GTG--AATGTT...................................................25118.0018000020000000000000000002205210000000003100000000000000000000000
...........................................................................................................TTAGCGGTACAAACATCGTGAGTACAAA.................................................................................................................................................................................................................................................................................................................28114.0014001000000000000000000000025400100000001000000000000000000000000
............................................................................................................TAGCGGTACAAACATCGTGAGTACAAA.................................................................................................................................................................................................................................................................................................................27114.0014000000000000000000000000037300010000000000000000000000000000000
....................................................................................................................................................................................................T-GTCTA---TTATAAA------------AA-------GAATTT--------------------AGGGAT..............................................................................................................................................................................27113.0013000000000000000000000000013500220000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TTTC-AATTGTTA-GGCGA--GTG--AATGTT...................................................26112.0012001010000000000000000001114210000000000000000000000000000000000
.................................................................................................................................................................................................T--T-GTCTA---TTATAAA------------AA-------GAATTT--------------------AGGGA...............................................................................................................................................................................27111.0011000000000000000000000001001600100000000100000000000000000000010
..................................................................................................................TACAAACATCGTGAGTACAAATCAAT--A.........................................................................................................................................................................................................................................................................................................27111.0011000020000000000000000000020401010000001000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TGTTTTC-AATTGTTA-GGCGA--GTG--AATG.....................................................27111.0011000000000000000000000000022120020000002000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TTTTC-AATTGTTA-GGCGA--GTG--AATGTT...................................................2719.009001000000000000000000000114200000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TAAA---------------------------------------------------------------AT---T---TGTTTTC-AATTGTTA-GGCGA--G.............................................................2818.008002000000000000000000000003210000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TC-AATTGTTA-GGCGA--GTG--AATGTTT-GA...............................................2718.008001000000000000000000000032200000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................T---TGTTTTC-AATTGTTA-GGCGA--GTG--AA.......................................................2618.008000001100000000000000000111300000000000000000000000000000000000
TAC----------AT------------------------------------------------------------------------------------AAAGTT-TTTAGCGGTACAAACA..............................................................................................................................................................................................................................................................................................................................2718.008000000000000000000000000004110110000000000000000000000000000000
...........................................................................................................TTAGCGGTACAAACATCGTGAGTAC....................................................................................................................................................................................................................................................................................................................2517.007001010000000000000000000100300000000001000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TGTTTTC-AATTGTTA-GGCGA--GTG--AA.......................................................2517.007000000000000000000000000213100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TT-AAACATAAA---------------------------------------------------------------AT---T---TGTTTTC-AATTGT........................................................................2717.007000000000000000000000000112300000000000000000000000000000000000
..........................................................................................................................TCGTGAGTACAAATCAAT--ATTTATT...................................................................................................................................................................................................................................................................................................2517.007001000000000000000000000013010100000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TC-AATTGTTA-GGCGA--GTG--AATGTT...................................................2417.007001000100000000000000000020200000000001000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TTC-AATTGTTA-GGCGA--GTG--AATG.....................................................2317.007000000200000000000001000020000100000000100000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TC-AATTGTTA-GGCGA--GTG--AATGTTT-.................................................2517.007001010000000000000000001011000000000002000000000000000000000000
...............................................................................................................................................................................................................................................T--------------------AGGGATTTTCTT-AAACATAAA---------------------------------------------------------------AT---..........................................................................................2416.006003000000000000000000000001200000000000000000000000000000000000
.............................................................................................................................................................................................................................................TTT--------------------AGGGATTTTCTT-AAACATAAA---------------------------------------------------------------AT---T---......................................................................................2716.006001000000000000000000000113000000000000000000000000000000000000
................................................................................................................................................................................................TT--T-GTCTA---TTATAAA------------AA-------GAATTT--------------------AGGGA...............................................................................................................................................................................2816.006000010000000000000000000012200000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TAAA---------------------------------------------------------------AT---T---TGTTTTC-AATTGTTA-GGC..................................................................2515.005004000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................TACAAATCAAT--ATTTATTTTTTT------T-TTGT..................................................................................................................................................................................................................................................................................2815.005000000000000000000000000001200020000000000000000000000000000000
...............................................................................................................................................................................................................................................................................T-AAACATAAA---------------------------------------------------------------AT---T---TGTTTTC-AATTGT........................................................................2615.005000010000000000000000000021010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................AAA---------------------------------------------------------------AT---T---TGTTTTC-AATTGTTA-GGCGA--G.............................................................2715.005001000000000000000000000022000000000000000000000000000000000000
..................................................................................................................TACAAACATCGTGAGTACAAATCAAT--AT........................................................................................................................................................................................................................................................................................................2815.005000000000000000000000000011101010000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TTTC-AATTGTTA-GGCGA--GTG--AATG.....................................................2415.005001000000000000000000000011020000000000000000000000000000000000
..........................................................................................................................TCGTGAGTACAAATCAAT--ATTTATTTTT................................................................................................................................................................................................................................................................................................2815.005000000000000000000000000002300000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TTC-AATTGTTA-GGCGA--GTG--AATGT....................................................2414.004000000000000000001000001002000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................T---TGTTTTC-AATTGTTA-GGCGA--GTG--A........................................................2514.004000000000000000000000000101010000000000000000000000000000000001
...............................................................................................................................................................................................................TATAAA------------AA-------GAATTT--------------------AGGGATTTTC..........................................................................................................................................................................2414.004000000100000000000000000000200000000001000000000000000000000000
...........................................................................................................TTAGCGGTACAAACATCGTGAGTACA...................................................................................................................................................................................................................................................................................................................2614.004001000000000000000000000010000100000001000000000000000000000000
...................................................................................................AAAGTT-TTTAGCGGTACAAACATCG...........................................................................................................................................................................................................................................................................................................................2514.004000000000000000001000000000100000000002000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TGTTTTC-AATTGTTA-GGCGA--GTG--A........................................................2414.004001000000000000000000000012000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TTTC-AATTGTTA-GGCGA--GTG--AATGT....................................................2514.004000000100000000000000000200100000000000000000000000000000000000
...............................................................................................................................................................................................................................................T--------------------AGGGATTTTCTT-AAACATAAA---------------------------------------------------------------AT---T---......................................................................................2513.003002000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................TATAAA------------AA-------GAATTT--------------------AGGGATTTTCTT-.......................................................................................................................................................................2613.003000020000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TAAA---------------------------------------------------------------AT---T---TGTTTTC-AATTGTTA-GGCGA--..............................................................2713.003000000100000000000000000001100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TC-AATTGTTA-GGCGA--GTG--AATGT....................................................2313.003000000000000000000000000000001000200000000000000000000000000000
...............................................................................................................................................................................................................TATAAA------------AA-------GAATTT--------------------AGGGATTTTCTC-.......................................................................................................................................................................2613.003000000000010000000000000000000200000000000000000000000000000000
.................................................................................................................................................................................................................TAAA------------AA-------GAATTT--------------------AGGGATT.............................................................................................................................................................................1913.003000000000030000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TTC-AATTGTTA-GGCGA--GTG--AATGTTT-.................................................2613.003000000100000000001000000100000000000000000000000000000000000000
...............................................................................................................................................................................................................................................T--------------------AGGGATTTTCTT-AAACATAAA---------------------------------------------------------------AT---T---TG....................................................................................2713.003001000000000000000000000001100000000000000000000000000000000000
...............................................................................................................................................................................................TTT--T-GTCTA---TTATAAA------------AA-------GAATTT--------------------AGG.................................................................................................................................................................................2713.003000000000000000000000000101000000000000100000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TC-AATTGTTA-GGCGA--GTG--AATGTTT-G................................................2612.002000000000000000000000001010000000000000000000000000000000000000
............................................................................................................TAGCGGTACAAACATCGTGAGTAC....................................................................................................................................................................................................................................................................................................................2412.002000000000000000000000000000200000000000000000000000000000000000
............................................................................................................TAGCGGTACAAACATCGTGAGTACAAAT................................................................................................................................................................................................................................................................................................................2812.002000000000000000000000000101000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AA---------------------------------------------------------------AT---T---TGTTTTC-AATTGTTA-GGCGA--G.............................................................2612.002000010000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................TT--------------------AGGGATTTTCTT-AAACATAAA---------------------------------------------------------------AT---T---T.....................................................................................2712.002000000000000000000000000001100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................AACATAAA---------------------------------------------------------------AT---T---TGTTTTC-AATTGT........................................................................2412.002000000000000000000000000200000000000000000000000000000000000000
..C----------AT------------------------------------------------------------------------------------AAAGTT-TTTAGCGGTACAAACATCG...........................................................................................................................................................................................................................................................................................................................2812.002001000000000000000000000010000000000000000000000000000000000000
...............................................................................................................................................................................................................TATAAA------------AA-------GAATTT--------------------AGGGATTT............................................................................................................................................................................2212.002000000100000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................TT--------------------AGGGATTTTCTT-AAACATAAA---------------------------------------------------------------AT---T---......................................................................................2612.002000000000000000000000000000200000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TTGTTA-GGCGA--GTG--AATGTTT-GAAA--...........................................2512.002000000000000000000000000002000000000000000000000000000000000000
...........................................................................................................................................................................................TTTTTTT--T-GTCTA---TTATAAA------------AA-------GAATT.........................................................................................................................................................................................................2712.002000000000000000000000000000100010000000000000000000000000000000
...................................................................................................................ACAAACATCGTGAGTACAAATCAAT--A.........................................................................................................................................................................................................................................................................................................2612.002001010000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................T---T---TGTTTTC-AATTGTTA-GGCGA--..............................................................2212.002000000000000000000000000000000000000000000000000000000000000002
.......................................................................................................................................................................................................................................................................................................................................................................TC-AATTGTTA-GGCGA--GTG--AATGTTT-GAA..............................................2812.002000000000000000000000000110000000000000000000000000000000000000
..........................................................................................................TTTAGCGGTACAAACATCGTGAGTACA...................................................................................................................................................................................................................................................................................................................2712.002001000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TGTTA-GGCGA--GTG--AATGTTT-GAAA--G------------------------------------------2512.002000000000000000000000000000000010000001000000000000000000000000
...............................................................................................................................................................................................................TATAAA------------AA-------GAATTT--------------------AGGGATT.............................................................................................................................................................................2112.002000010000000000000000000000000000000001000000000000000000000000
................................................................................................................................................................................................TT--T-GTCTA---TTATAAA------------AA-------GAATTT--------------------AGG.................................................................................................................................................................................2612.002000000000000000000000000011000000000000000000000000000000000000
.................................................................................................................................................................................................................................AA-------GAATTT--------------------AGGGATTTTCTT-AAACAT.................................................................................................................................................................2612.002000000000000000000000000000020000000000000000000000000000000000
..............................................................................................................................................................................................TTTT--T-GTCTA---TTATAAA------------AA-------GAATTT--------------------AG..................................................................................................................................................................................2712.002000020000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TA---TTATAAA------------AA-------GAATTT--------------------AGGGATTTTC..........................................................................................................................................................................2712.002000000000000000000000000001100000000000000000000000000000000000
.......................................................................................................TT-TTTAGCGGTACAAACATCGTGAGTAC....................................................................................................................................................................................................................................................................................................................2812.002000010001000000000000000000000000000000000000000000000000000000
..........................................................................................................................TCGTGAGTACAAATCAAT--ATTTATTTT.................................................................................................................................................................................................................................................................................................2712.002000000000000000000000001010000000000000000000000000000000000000
.........................................................................................................................................................................................................TA---TTATAAA------------AA-------GAATTT--------------------AGGGATTT............................................................................................................................................................................2512.002000000000000000000000000200000000000000000000000000000000000000
.................................................................................................................................................................................................T--T-GTCTA---TTATAAA------------AA-------GAATTT--------------------AGGGAT..............................................................................................................................................................................2812.002000000000000000000000000000200000000000000000000000000000000000
...........................................................................................................................CGTGAGTACAAATCAAT--ATTTATTTTT................................................................................................................................................................................................................................................................................................2712.002000000000000000000000000000100100000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TTTC-AATTGTTA-GGCGA--GTG--AA.......................................................2212.002001000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TA-GGCGA--GTG--AATGTTT-GAAA--G------------------------------------------2212.002000000000000000000000000000110000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................GTTA-GGCGA--GTG--AATGTTT-GAAA--...........................................2311.001000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................CATCGTGAGTACAAATCAAT--ATTTAT....................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000100000000000000000000000000000000000000
..............T------------------------------------------------------------------------------------AAAGTT-TTTAGCGGTACAAACATCGTG.........................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000010000000000000000000000000000000
TAC----------AT------------------------------------------------------------------------------------AAAGTT-TTTAGCGGTACAAAC...............................................................................................................................................................................................................................................................................................................................2611.001000010000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................TT--------------------AGGGATTTTCTT-AAACATAAA---------------------------------------------------------------...............................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................T---T---TGTTTTC-AATTGTTA-GGCGA--G.............................................................2311.001000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TTT--------------------AGGGATTTTCTT-AAACATAAA---------------------------------------------------------------AT---..........................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
............................................................................................................TAGCGGTACAAACATCGTGAGTACAAATC...............................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000001
...............................................................................................................................................................................................................TATAAA------------AA-------GAATTT--------------------AGGGAT..............................................................................................................................................................................2011.001000000000000000000000000000000000000000100000000000000000000000
...........................................................................................................TTAGCGGTACAAACATCGTGAGTA.....................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................TCGTGAGTACAAATCAAT--..........................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000001000000000000000000000000000000000000
......................................................................................................GTT-TTTAGCGGTACAAACATCGTGAG.......................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000100000000000000000000000000000000000
.............AT------------------------------------------------------------------------------------AAAGTT-TTTAGCGGTACAAACATCGT..........................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................TTTAGCGGTACAAACATCGTGAGTA.....................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TTTTC-AATTGTTA-GGCGA--GTG--AATGT....................................................2611.001000000000000000000000000100000000000000000000000000000000000000
...............................................................................................................................................................................................................................................T--------------------AGGGATTTTCTT-AAACATA................................................................................................................................................................2011.001000000000000000000000001000000000000000000000000000000000000000
.................................................................................................................................................................................................................................AA-------GAATTT--------------------AGGGATTTTCTT-AAAC...................................................................................................................................................................2411.001000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................................................................................................................................................................T-AAACATAAA---------------------------------------------------------------AT---T---TGTTTTC-AATTGTT.......................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TC-AATTGTTA-GGCGA--GTG--AATGTTT-A................................................2611.001000000100000000000000000000000000000000000000000000000000000000
...................................................................................................AAAGTT-TTTAGCGGTACAAACA..............................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................TT--T-GTCTA---TTATAAA------------AA-------GAATTT--------------------AG..................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TTA-GGCGA--GTG--AATGTTT-GAAA--...........................................2211.001000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................TT--------------------AGGGATTTTCTT-AAACATAAA---------------------------------------------------------------AT---..........................................................................................2511.001000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TTTC-AATTGTTA-GGCGA--GTG--.........................................................2011.001000000000000000000000001000000000000000000000000000000000000000
..............T------------------------------------------------------------------------------------AAAGTT-TTTAGCGGTACAAACATC............................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TC-AATTGTTA-GGCGA--GTG--AATG.....................................................2211.001000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TTTTC-AATTGTTA-GGCGA--GTG--AATG.....................................................2511.001000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TTTC-AATTGTTA-GGCGA--GTG--A........................................................2111.001000000000000000000000000100000000000000000000000000000000000000
.......................................................................................................................................TCAAT--ATTTATTTTTTT------T-TTGTT.................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AT---T---TGTTTTC-AATTGTTA-GG...................................................................2011.001000000000000000000000000000000000000000000000000000000000000001
.............................................................................................................................TGAGTACAAATCAAT--ATTTATTTTTT...............................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................TA---TTATAAA------------AA-------GAATTT--------------------AGGGATTTTCT.........................................................................................................................................................................2811.001000010000000000000000000000000000000000000000000000000000000000
..................................................................................................................TACAAACATCGTGAGTACAAATCAAT--..........................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000001000000000000000000000000
....................................................................................................AAGTT-TTTAGCGGTACAAACATCG...........................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................TAAA------------AA-------GAATTT--------------------AGGGATTTTCAA-.......................................................................................................................................................................2421.002000000000000000000000000000020000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................TTTCTT-AAACATAAA---------------------------------------------------------------AT---T---TGTTTTC-AAT...........................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
............................................................................................................TAGCGGTACAAACATCGTGAGTACAA..................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................GAGTACAAATCAAT--ATTTATTTTTTT------........................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATTGTTA-GGCGA--GTG--AATGTTT-GAAA--...........................................2611.001000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TGTTA-GGCGA--GTG--AATGTT...................................................1911.001000000000000000000000001000000000000000000000000000000000000000
...................................................................................................................ACAAACATCGTGAGTACAAATCAAT--ATT.......................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................AAA------------AA-------GAATTT--------------------AGGGATTTTCTT-AAAC...................................................................................................................................................................2711.001000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TC-AATTGTTA-GGCGA--GTG--AATGTTC-.................................................2511.001000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................GTCTA---TTATAAA------------AA-------GAATTT--------------------AGGGAT..............................................................................................................................................................................2611.001000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................TGAGTACAAATCAAT--ATTTATTTTTTT------........................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TCGTGAGTACAAATCAAT--ATTTA.....................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................AATTGTTA-GGCGA--GTG--AATGTTT-GAAA--...........................................2711.001000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................TCTA---TTATAAA------------AA-------GAATTT--------------------AGGGATTT............................................................................................................................................................................2711.001000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................TAAA------------AA-------GAATTT--------------------AGGGATTTTCTT-AAAC...................................................................................................................................................................2811.001000010000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TA---TTATAAA------------AA-------GAATTT--------------------AGGGATT.............................................................................................................................................................................2411.001000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TGTTA-GGCGA--GTG--AATGTTT-GA...............................................2211.001000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................T---TGTTTTC-AATTGTTA-GGCGA--GT............................................................2311.001000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................T-AAACATAAA---------------------------------------------------------------AT---T---TGTTTTC-AATTGTC.......................................................................2711.001000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................................................................................................................TTATAAA------------AA-------GAATTT--------------------AGGGATTT............................................................................................................................................................................2311.001000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................GTACAAACATCGTGAGTACA...................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................TTC-AATTGTTA-GGCGA--GTG--.........................................................1911.001000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TC-AATTGTTA-GGCGA--GTG--AA.......................................................2011.001000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TT-AAACATAAA---------------------------------------------------------------AT---T---TGTTTTC-AATTGTC.......................................................................2811.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TGTTA-GGCGA--GTG--AATGTTT-GAA..............................................2311.001000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................TATAAA------------AA-------GAATTT--------------------AGGGATTTTCTT-A......................................................................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................TA---TTATAAA------------AA-------GAATTT--------------------AGGG................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................GTTTTC-AATTGTTA-GGCGA--GTG--AATG.....................................................2611.001000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TTC-AATTGTTA-GGCGA--GTG--A........................................................2011.001000000000000000000000001000000000000000000000000000000000000000
...........................................................................................................................CGTGAGTACAAATCAAT--ATTTATTT..................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATTGTTA-GGCGA--GTG--AATGTT...................................................2111.001000000000000000000000000010000000000000000000000000000000000000
.............AT------------------------------------------------------------------------------------AAAGTT-TTTAGCGGTACAAACATCG...........................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000100000000000000000000000
...............................................................................................................................................................................................................TATAAA------------AA-------GAATTT--------------------AGGGATTTTCTT-C......................................................................................................................................................................2711.001000000100000000000000000000000000000000000000000000000000000000
...................................................................................................AAAGTT-TTTAGCGGTACAAAC...............................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................................T---TGTTTTC-AATTGTTA-GGC..................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................T-TTTAGCGGTACAAACATCG...........................................................................................................................................................................................................................................................................................................................2011.001000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................TACAAACATCGTGAGTACAAATCAAT--ATT.......................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................TTTAGCGGTACAAACATCGTGAGTACAAA.................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................TTTTT--T-GTCTA---TTATAAA------------AA-------GAATTT--------------------AG..................................................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................ACATAAA---------------------------------------------------------------AT---T---TGTTTTC-AATTGTTA-GG...................................................................2711.001000000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AT---T---TGTTTTC-AATTGTTA-GGC..................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................................................................................................................TATAAA------------AA-------GAATTT--------------------AGGGA...............................................................................................................................................................................1911.001000010000000000000000000000000000000000000000000000000000000000
........................................................................................................T-TTTAGCGGTACAAACATCGTGAGTA.....................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TTT--------------------AGGGATTTTCTT-AAACATAAA---------------------------------------------------------------AT---T---T.....................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TTTC-AATTGTTA-GGCGA--GTG--AATGTTC-.................................................2711.001000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................TT-TTTAGCGGTACAAACATCG...........................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
TAC----------AT------------------------------------------------------------------------------------AAAGTT-TTTAGCGGTACAAACAT.............................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................T--T-GTCTA---TTATAAA------------AA-------GAATTT--------------------AGGG................................................................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................TCGTGAGTACAAATCAAT--ATTTATTT..................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TC-AATTGTTA-GGCGA--GTG--AAT......................................................2111.001000000100000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TTGTTA-GGCGA--GTG--AATGTTT-GAA..............................................2411.001000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TTTC-AATTGTTA-GGCGA--GTG--AATGTTT-G................................................2811.001000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................GTTA-GGCGA--GTG--AATGTTT-GA...............................................2111.001000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TGTTTTC-AATTGTTA-GGCGA--GT............................................................2211.001000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................GTCTA---TTATAAA------------AA-------GAATTT--------------------AGGGATT.............................................................................................................................................................................2711.001000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................T-GTCTA---TTATAAA------------AA-------GAATTT--------------------AG..................................................................................................................................................................................2311.001000000000000000000000000010000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................T---TGTTTTC-AATTGTTA-GGCGA--G.............................................................2211.001100000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................T---TGTTTTC-AATTGTTA-GGCGA--GTG--AAT......................................................2711.001000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................T---TGTTTTC-AATTGTTA-GGCGA--GTG--.........................................................2411.001000000000000000000000000010000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................CTT-AAACATAAA---------------------------------------------------------------AT---T---TGTTTTC-AATTGT........................................................................2811.001000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................TTTTT--T-GTCTA---TTATAAA------------AA-------GAATT.........................................................................................................................................................................................................2511.001000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................TATAAA------------AA-------GAATTT--------------------AGGGATTTT...........................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................TACAAACATCGTGAGTAC....................................................................................................................................................................................................................................................................................................................1811.001000001000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................TT--------------------AGGGATTTTCTT-AAACATAAA---------------------------------------------------------------AT---T---TG....................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................TT--T-GTCTA---TTATAAA------------AA-------GAATTT--------------------AGGG................................................................................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TAAA---------------------------------------------------------------AT---T---TGTTTTC-AATTGTTA-G....................................................................2311.001000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................A-GGCGA--GTG--AATGTTT-GAA..............................................1911.001000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TAAA---------------------------------------------------------------AT---T---TGTTTTC-AATTGTTA-GGCGA--GT............................................................2911.001001000000000000000000000000000000000000000000000000000000000000
TAC----------AT------------------------------------------------------------------------------------AAAGTT-TTTAGCGGT.....................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TGTTA-GGCGA--GTG--AATGTTT-.................................................2011.001000000100000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................ACATAAA---------------------------------------------------------------AT---T---TGTTTTC-AATTGT........................................................................2311.001000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................AGTT-TTTAGCGGTACAAACATCG...........................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000100000000000000000000000000000000000000
........................................................................................................T-TTTAGCGGTACAAACATCGTGAGTAC....................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................................................................................................................................................T--------------------AGGGATTTTCTT-AAACATAAA---------------------------------------------------------------AT---T---T.....................................................................................2611.001000000000000000000000000000100000000000000000000000000000000000
............................................................................................................TAGCGGTACAAACATCGTGAGTACAAAA................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AT---T---TGTTTTC-AATTGTTA-GGCGA--G.............................................................2411.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TTGTTA-GGCGA--GTG--AATGGGA-.................................................2160.171000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................................................TATTTTTTT------T-TTGTTTT-TT--------------TTTTTT........................................................................................................................................................................................................................................................25200.102000010000000000000000000100000000000000000000000000000000000000
.................................................................................................................................................TATTTTTTT------T-TTGTTTT-TT--------------TTTTTTT.......................................................................................................................................................................................................................................................26190.051000001000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TTGTTTT-TT--------------TTTTTTTT--T-GT................................................................................................................................................................................................................................................20200.051000010000000000000000000000000000000000000000000000000000000000
droMoj3
TAC----------AT------------------------------------------------------------------------------------AACGTT-TTTAGCGGTACAAACATCGTGAGTACAAATCAAT--ATTTATTTTGTT-----TT-T---TCGT----------------TTGTTTTT--T-GTCTA---TTATAAAGAAGTAACGAGAAGAA-----GAATTT--------------------AGG-GATTTCCTCAAA---------------ACAAAAAAAAAAAAA--------------------------CA------AAAATAT---TT--TGTTTTC-AATTGTTA-GGCGACAGTGAAAAAGTTT-T------CGA-------------------AGAAAAA------AG--AAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................................................................................................TTC-AATTGTTA-GGCGACAGTGAAAAAGTT...................................................2911.001100000
.............................................................................................................AGCGGTACAAACATCGTGAGT......................................................................................................................................................................................................................................................................................................................2111.001100000
....................................................................................................ACGTT-TTTAGCGGTACAAACATCG...........................................................................................................................................................................................................................................................................................................................2411.001100000
.......................................................................................................................................TCAAT--ATTTATTTTGTT-----TT-T---TCGT----------------T.............................................................................................................................................................................................................................................................2511.001100000
................................................................................................................................................................................................................................................................................................................................................................................TA-GGCGACAGTGAAAAAGT....................................................1911.001100000
..........................................................................................................................................................................................................................................................................................................................................................T---TT--TGTTTTC-AATTGTTA-GGCGACAGT............................................................2711.001100000
.............................................................................................................AGCGGTACAAACATCGTGAGTACA...................................................................................................................................................................................................................................................................................................................2411.001000100
.......................................................................................................................................................................CGT----------------TTGTTTTT--T-GTCTA---TTATAAAGAAG...............................................................................................................................................................................................................................2811.001100000
...............................................................................................................................................................................................................TATAAAGAAGTAACGAGAAGAA-----GAATTT--------------------....................................................................................................................................................................................2811.001100000
...................................................................................................................................................................................................................................................................................................................................................................GTTTTC-AATTGTTA-GGCGACAGTGAAA........................................................2711.001100000
..............................................................................................................................................................................................TTTT--T-GTCTA---TTATAAAGAAGTAACGAGA.......................................................................................................................................................................................................................2911.001000001
...............................................................................................................................................................................................................................GAAGAA-----GAATTT--------------------AGG-GATT............................................................................................................................................................................1911.001000001
..............................................................................................................................................................................................................................................................................................................................................................TT--TGTTTTC-AATTGTTA-GGCGACAGT............................................................2611.001000001
...............................................................................................................................................................................................................TATAAAGAAGTAACGAGAAGAA-----GAATT.........................................................................................................................................................................................................2711.001100000
..................................................................................................................................................................T---TCGT----------------TTGTTTTT--T-GTCTA---TT........................................................................................................................................................................................................................................2111.001000010
........................................................................................................................................................................................................................GTAACGAGAAGAA-----GAATTT--------------------AGG-GATT............................................................................................................................................................................2611.001000001
.....................................................................................................................................................................................................................................................................................................................................................................TTTC-AATTGTTA-GGCGACAGTGAA.........................................................2411.001000001
droGri2
TAC----------AT------------------------------------------------------------------------------------AAAGTT-TTTAGCGGTACAAACATCGTGAGTACAAATCAAT--TATTAATTTTTT------T-TTTTTTTTTGT--------------TTTTTTT--T-TCCTA---TTATAAA------------AA-------GAATTT--------------------A-GGGATTTCCTTAAACATGAA---------------------------------------------------------------AT---T---TGTTTTC-AATTGTTA-GGCGA--GTG--AAAGTTA-GAAA--A-------------------------GAT--------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............AT------------------------------------------------------------------------------------AAAGTT-TTTAGCGGTG....................................................................................................................................................................................................................................................................................................................................1811.00110

Generated: 05/18/2015 at 03:07 PM