ID:

dsi_1221

 Coordinate:

2l:15219-15273 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.1 -4.9

Flybase annnotation

exon [2l_15274_15555_-]; CDS [2l_15274_15555_-]; exon [2l_14339_15218_-]; CDS [2l_14339_15218_-]; intron [2l_15219_15273_-]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------##################################################
TAGTAAATTTACTAGTTATTGGCGAATCGCTCATGGCTGACCCGATGCGCGTGAGTATTAATTAATAGGGATACGTTTTTGTAATAAATAACGCGCTTCACACAGGAGCGCCCATACGTACTCTACACCCACAAGCTCTATGCAGATGGACTTGG
**************************************************((((((.(((.(((.((.(((......))).)).))).)))...)).))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M053
female body
 M025
embryo
 GSM343915
embryo
 O001
Testis
 M023
head
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
..............................................................TAATAGGGATACGTTTTTGTAATAAA................................................................... 26 0 1 1265.00 1265 1186 48 8 23 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATCGCTCA.......................................................................................................................... 24 0 1 221.00 221 185 32 0 4 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTAATAA.................................................................... 25 0 1 179.00 179 173 1 4 1 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATCGCTCATGGC...................................................................................................................... 28 0 1 104.00 104 12 29 57 6 0 0 0 0 0 0 0 0
...................................................................................................................ACGTACTCTACACCCACAAGCTCTA............... 25 0 1 82.00 82 47 18 11 0 6 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTAATA..................................................................... 24 0 1 68.00 68 61 3 0 4 0 0 0 0 0 0 0 0
.............................................................TTAATAGGGATACGTTTTTGTAATAAA................................................................... 27 0 1 63.00 63 61 2 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATCGCTCAT......................................................................................................................... 25 0 1 58.00 58 53 3 0 1 1 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTAATAAATA................................................................. 28 0 1 57.00 57 51 3 0 3 0 0 0 0 0 0 0 0
.................................................................TAGGGATACGTTTTTGTAATAAATA................................................................. 25 0 1 51.00 51 49 0 1 1 0 0 0 0 0 0 0 0
.................................................................TAGGGATACGTTTTTGTAATAAATAA................................................................ 26 0 1 48.00 48 47 0 0 1 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTAATAAAT.................................................................. 27 0 1 47.00 47 47 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................TACGTACTCTACACCCACAAGCTCTA............... 26 0 1 39.00 39 31 3 4 0 0 0 0 0 0 0 1 0
...................................................................................................................ACGTACTCTACACCCACAAGCTCT................ 24 0 1 36.00 36 30 3 1 1 1 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATCGCTCATG........................................................................................................................ 26 0 1 32.00 32 28 4 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ACGTACTCTACACCCACAAGCTCTATG............. 27 0 1 28.00 28 0 1 27 0 0 0 0 0 0 0 0 0
..................................................................................................................TACGTACTCTACACCCACAAGCTC................. 24 0 1 28.00 28 27 0 1 0 0 0 0 0 0 0 0 0
.................................TGGCTGACCCGATGCGCGTGAGT................................................................................................... 23 0 1 24.00 24 22 1 0 0 1 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTAAT...................................................................... 23 0 1 19.00 19 19 0 0 0 0 0 0 0 0 0 0 0
.....................................TGACCCGATGCGCGTGAGTATTAAT............................................................................................. 25 0 1 19.00 19 16 2 0 1 0 0 0 0 0 0 0 0
...................................................................................................................ACGTACTCTACACCCACAAGCTCTATGC............ 28 0 1 18.00 18 0 9 9 0 0 0 0 0 0 0 0 0
.................................................................TAGGGATACGTTTTTGTAATAAA................................................................... 23 0 1 16.00 16 15 1 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATCGCTCATGGCT..................................................................................................................... 29 0 1 16.00 16 0 0 16 0 0 0 0 0 0 0 0 0
.................................TGGCTGACCCGATGCGCGTGAGTA.................................................................................................. 24 0 1 15.00 15 14 1 0 0 0 0 0 0 0 0 0 0
.............AGTTATTGGCGAATCGCTCA.......................................................................................................................... 20 0 1 13.00 13 13 0 0 0 0 0 0 0 0 0 0 0
.................................TGGCTGACCCGATGCGCGTGAGTAT................................................................................................. 25 0 1 13.00 13 9 3 0 1 0 0 0 0 0 0 0 0
...................................................................................................................ACGTACTCTACACCCACAAGCTC................. 23 0 1 13.00 13 4 4 5 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTAATAAAA.................................................................. 27 1 1 12.00 12 12 0 0 0 0 0 0 0 0 0 0 0
.................ATTGGCGAATCGCTCA.......................................................................................................................... 16 0 1 12.00 12 12 0 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATCGCTCATGG....................................................................................................................... 27 0 1 12.00 12 6 4 0 2 0 0 0 0 0 0 0 0
..................................................................................................................TACGTACTCTACACCCACAAGCTCT................ 25 0 1 12.00 12 12 0 0 0 0 0 0 0 0 0 0 0
.................................TGGCTGACCCGATGCGCGTGAG.................................................................................................... 22 0 1 11.00 11 11 0 0 0 0 0 0 0 0 0 0 0
.....................................TGACCCGATGCGCGTGAGT................................................................................................... 19 0 1 11.00 11 11 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ACGTACTCTACACCCACAAGCT.................. 22 0 1 11.00 11 9 1 1 0 0 0 0 0 0 0 0 0
.............................................................TTAATAGGGATACGTTTTTGTAATAA.................................................................... 26 0 1 11.00 11 11 0 0 0 0 0 0 0 0 0 0 0
.................................TGGCTGACCCGATGCGCGTGAGTATT................................................................................................ 26 0 1 10.00 10 6 4 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATCGCTC........................................................................................................................... 23 0 1 10.00 10 8 0 1 1 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTT.............................................................................. 15 0 1 10.00 10 10 0 0 0 0 0 0 0 0 0 0 0
...........................................................AATTAATAGGGATACGTTTTTGTAA....................................................................... 25 0 1 9.00 9 9 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................ATACGTACTCTACACCCACAAGCTC................. 25 0 1 9.00 9 9 0 0 0 0 0 0 0 0 0 0 0
...............TTATTGGCGAATCGCTCA.......................................................................................................................... 18 0 1 9.00 9 9 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTAATAAT................................................................... 26 1 1 9.00 9 8 0 0 1 0 0 0 0 0 0 0 0
.....................................TGACCCGATGCGCGTGAGTATT................................................................................................ 22 0 1 8.00 8 6 0 0 0 2 0 0 0 0 0 0 0
................TATTGGCGAATCGCTCATGGCTGACC................................................................................................................. 26 0 1 8.00 8 4 0 4 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATCGC............................................................................................................................. 21 0 1 7.00 7 3 0 0 1 3 0 0 0 0 0 0 0
..................................................................................................................TACGTACTCTACACCCACAAGCT.................. 23 0 1 7.00 7 5 0 2 0 0 0 0 0 0 0 0 0
.....................................TGACCCGATGCGCGTGAGTATTAATTA........................................................................................... 27 0 1 7.00 7 5 0 2 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATC............................................................................................................................... 19 0 1 7.00 7 6 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................ACGTACTCTACACCCACAAGC................... 21 0 1 6.00 6 0 0 0 0 6 0 0 0 0 0 0 0
.....................................TGACCCGATGCGCGTGAGTATTAA.............................................................................................. 24 0 1 6.00 6 5 1 0 0 0 0 0 0 0 0 0 0
.................................TGGCTGACCCGATGCGC......................................................................................................... 17 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTT............................................................................. 16 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTT............................................................................ 17 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0
..............GTTATTGGCGAATCGCTCA.......................................................................................................................... 19 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0
.....................................TGACCCGATGCGCGTGAGTAT................................................................................................. 21 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATCGCT............................................................................................................................ 22 0 1 6.00 6 3 3 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ACGTACTCTACACCCACAA..................... 19 0 1 6.00 6 0 0 0 0 6 0 0 0 0 0 0 0
..........................................................TAATTAATAGGGATACGTTTTTGTAA....................................................................... 26 0 1 6.00 6 5 0 0 1 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAA................................................................................................................................. 17 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0
.................ATTGGCGAATCGCTCAT......................................................................................................................... 17 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTAATAAG................................................................... 26 1 1 5.00 5 4 1 0 0 0 0 0 0 0 0 0 0
.................................TGGCTGACCCGATGCGCGT....................................................................................................... 19 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0
.............AGTTATTGGCGAATCGCTCAT......................................................................................................................... 21 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TCTACACCCACAAGCTCT................ 18 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTAATAGGGATACGTTTTTGTAAT...................................................................... 24 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGGATACGTTTTTGTAATAAAT.................................................................. 24 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0
...............................................................AATAGGGATACGTTTTTGTAATAAA................................................................... 25 0 1 5.00 5 2 3 0 0 0 0 0 0 0 0 0 0
..............................................................TGATAGGGATACGTTTTTGTAATAAA................................................................... 26 1 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0
.....................................TGACCCGATGCGCGTGAGTA.................................................................................................. 20 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................CAAGCTCTATGCAGATGGACT... 21 0 1 4.00 4 1 0 3 0 0 0 0 0 0 0 0 0
................................................................ATAGGGATACGTTTTTGTAATAAATA................................................................. 26 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATCGCTCATGAC...................................................................................................................... 28 1 1 4.00 4 0 0 4 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTT........................................................................... 18 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAAT................................................................................................................................ 18 0 1 4.00 4 2 0 0 0 2 0 0 0 0 0 0 0
..............................................................TAATAGGGGTACGTTTTTGTAATAAA................................................................... 26 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
.................................TGGCTGACCCGATGCGCG........................................................................................................ 18 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TAACGCGCTTCACACAGGAG............................................... 20 0 1 4.00 4 3 0 0 1 0 0 0 0 0 0 0 0
.................................TGGCTGACCCGATGCGCGTG...................................................................................................... 20 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
................TATTGGCGAATCGCTCA.......................................................................................................................... 17 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TACTCTACACCCACAAGCTCTATGCAGA......... 28 0 1 4.00 4 3 1 0 0 0 0 0 0 0 0 0 0
.......................................................................TACGTTTTTGTAATAAATAACGCGCT.......................................................... 26 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
.....................................TGACCCGATGCGCGTG...................................................................................................... 16 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTA........................................................................ 21 0 1 3.00 3 1 0 0 0 2 0 0 0 0 0 0 0
............TAGTTATTGGCGAATCGCTCATGGC...................................................................................................................... 25 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
.................................TGGCTGACCCGATGCGCGTGA..................................................................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...................TGGCGAATCGCTCATGGCTGACCCGA.............................................................................................................. 26 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...............................................................AATAGGGATACGTTTTTGTAATAAATA................................................................. 27 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATGCGTTTTTGTAATAAA................................................................... 26 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
....................................................GAGTAATGATTAATAGGGACA.................................................................................. 21 3 1 3.00 3 0 0 0 0 0 2 0 0 0 1 0 0
..........ACTAGTTATTGGCGAATCGCTCA.......................................................................................................................... 23 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATCGCTCATGGG...................................................................................................................... 28 1 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0
........CTACTAGTTATTGGCGAATCGCTCATGGC...................................................................................................................... 29 1 1 3.00 3 1 0 2 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTTTAATAAA................................................................... 26 1 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0
....................................................................................................................CGTACTCTACACCCACAAGCTCTA............... 24 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0
............TAGTTATTGGCGAATCGCTCATG........................................................................................................................ 23 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
................................................................ATAGGGATACGTTTTTGTAATAAAT.................................................................. 25 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
............TAGTTATTGGCGAATCGCTCA.......................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TTCACACAGGAGCGCCCATACGTACTC................................ 27 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0
.....................................TGACCCGATGCGCGTGAGTATTAAA............................................................................................. 25 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................TCATAGGGATACGTTTTTGTAATAAA................................................................... 26 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CACAAGCTCTATGCAGA......... 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGGAATAAA................................................................... 26 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0
.................................TGGCTGACCCGATGCGCGTGAAA................................................................................................... 23 2 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................AATAGGGATACGTTTTTGTAATAAAT.................................................................. 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..............GTTATTGGCGAATCGCTCATG........................................................................................................................ 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..........ACTAGTTATTGGCGAATCGCTCATGGC...................................................................................................................... 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................ACTCTACACCCACAAGCTCTA............... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTGATAAA................................................................... 26 1 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0
.............................................TGCGCGTGAGTATTAATTAATAGGGA.................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
......................................GACCCGATGCGCGTGAGTAT................................................................................................. 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTAGTAAA................................................................... 26 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
................................................................ATAGGGATACGTTTTTGTAATAAATAA................................................................ 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATCGCTCCTGGC...................................................................................................................... 28 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
...................................................................................................................ACGTACTCTACACCCACAAGCTCTT............... 25 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.................................................................................................TCACACAGGACCGCCCATACGTACTC................................ 26 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGTTACGTTTTTGTAATAAA................................................................... 26 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGGATACGTTTTTGTAATAA.................................................................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................CTAATAGGGATACGTTTTTGTAATAAA................................................................... 27 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TAACGCGCTTCACACAGGA................................................ 19 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTGATAA.................................................................... 25 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
..........................TCGCTCATGGCTGACCCGATGCGC......................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATGGGGATACGTTTTTGTAATAAA................................................................... 26 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
............................................ATGCGCGTGAGTATTAAT............................................................................................. 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGGTTTTGTAATAAA................................................................... 26 1 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0
.............AGTTATTGGCGAATCGCTCATG........................................................................................................................ 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...................................GCTGACCCGATGCGCGTGAG.................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TAACGCGCTTCACACAGGAGC.............................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................GATGCGCGTGAGTATT................................................................................................ 16 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..................TTGGCGAATCGCTCATGGCTGACCCGA.............................................................................................................. 27 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TACACCCACAAGCTCTATGCAGATGGAC.... 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................CTACACCCACAAGCTC................. 16 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATCCCTCATGGC...................................................................................................................... 28 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCG................................................................................................................................... 15 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................CGCGTGAGTATTAATTAATAGGGA.................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ACGTACTCTACACCCACAAGCTCTATGCA........... 29 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0
......................................................GTAATGATTAATAGGGATA.................................................................................. 19 2 2 2.00 4 0 0 0 0 0 0 2 1 1 0 0 0
.....................................TGACCCGATGCGCGTGAGTATTA............................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGCTTTTGTAATAAA................................................................... 26 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.........AACTAGTTATTGGCGAATCGCTCA.......................................................................................................................... 24 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.................................TGGCTGACCCGATGCGCGTGAGTATTA............................................................................................... 27 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................CTACACCCACAAGCTCTA............... 18 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................TAGTTAATAGGGATACGTTTTTGTAATAAA................................................................... 30 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
......................................................GTAATGATTAATAGGGA.................................................................................... 17 2 13 1.62 21 2 0 0 0 0 0 2 5 4 0 0 8
......................................................................................................CAGGAGCGCCCATACGTACTC................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATCGCTCAC......................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................CAATAAATAACGCGCTTCACACAGG................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................GTATTAATTAATAGGGA.................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........CACTAGTTATTGGCGAATCGCTCA.......................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGGATACGTTTTTGTAATAAT................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTAA....................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGGATACGTTTTTGTAATAGA................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................TGATTAATAGGGATACGTTTTTGTAA....................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATCGCTCCTTGCC..................................................................................................................... 29 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................CACACAGGAGCGCCCATACGTACTCTA.............................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TCCTAGTTATTGGCGAATCGCTCATG........................................................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TTCACACAGGAGCGCCCATACGTAC.................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................GGCGAATCGCTCATGGCTGAC.................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................TACGTACTCTACACCCACAAGCAT................. 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TTCTAGTTATTGGCGAATCGCTCAT......................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........CACTAGTTATTGGCGAATCGCTCATGGC...................................................................................................................... 28 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................TGACCCGATGCGCGTGAGTATTAAAA............................................................................................ 26 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TACACCCACAAGCTCTATGCAGATGGACT... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................GATGCGCGTGAGTATTA............................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................ACGCGCTTCACACAGGAGC.............................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATCGCCCAT......................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TACTTGTTATTGGCGAATCGCTCA.......................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................GGCTGACCCGATGCGCGTGAGTA.................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................ATGGGGATACGTTTTTGTAATAAA................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................TGACCCGATGCGCGTGAGTAGT................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TACTCTACACCCACAAGTTCTA............... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............AGTTATTGGCGAATCGCTC........................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................GGAGCGCCCATACGTACTC................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTCATAAA................................................................... 26 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................ACGTACTCTACACCCAAAAGCT.................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATCGCCCA.......................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................GGAGCGCCCATACGTA................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TCATAGGGATACGTTTTTGTAATAAAT.................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGACTCGCTCATTG....................................................................................................................... 27 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATCCGTTCTTGTAATAAA................................................................... 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGCCGAATCGCTCA.......................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGT......................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGGATACGTTTTTGTAATA..................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTAATAGGGATACGTT.............................................................................. 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATCGCTCATTG....................................................................................................................... 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................TTCACACAGGAGCGCCCAT........................................ 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................GCTTACGTTTTTGTAATAAATAACGCGCTT......................................................... 30 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TCACACAGGAGCGCCCAT........................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CACAAGCTCTATGCAGATGGACAC.. 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGGATACGTTTTCGTAATAAA................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................AGGAGCGCCCATACGTACCCTACACCCA........................ 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................TCGCTGACCCGATGCGCGTGAGTAT................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................TGGCTGACCCGATGCGCGTGAGTG.................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................CGGCTGACCCGATGCGCGTGAGT................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........ATACTAGTTATTGGCGAATCGCTCA.......................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................TTGGCGAATCGCTCAT......................................................................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTAATATA................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................TGCGTACTCTACACCCACAAGCT.................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................ACTCTACATCCACAAGCT.................. 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGAATACGTTTTTGTAATAA.................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................TGGTTGACCCGATGCGCGTGAGT................................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTAATAG.................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................AATTAATAGGGATACGTTTTTGTAG....................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................ACACAGGAGCGCCCATACGTAC.................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................AGACCCGATGCGCGTGAGT................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................AATAGGGATACGTTTTTGTAAT...................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATCCGTTTTTGTAATAAA................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................TGACCCGATGCGCGCGAGTATTAAT............................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGGTACGTTTTTGTAATA..................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TTGTAATAAATAACGCGCTTCACACA................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................AATTAATAGGGATACGTTTTTGTAAT...................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGAGATACGTTTTTGTAATAAA................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................ACTCTACACCCACAAGCTC................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................ATACGTTTTTGTAATAA.................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................TCATGGCTGACCCGATGCGCGTGAG.................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGAGACGTTTTTGTAATAGA................................................................... 26 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................TAGGGATACGTTTTTGTAAT...................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGGGTACGTTTTTGTAATAAATAA................................................................ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TACTAGCTATTGGCGAATCGCTCA.......................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ACGTACTCTAAACCCACAAGCTCTA............... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................TACGTTTTTGTAATAAATAACGCGCTT......................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................ACGTTTTTGTAATAA.................................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTAACAAATAA................................................................ 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGGATGCGTTTTTGTAATAAA................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................CACACAGGAGCGCCCA......................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............TAGTTATTGGCGAATCGCTCATGGCT..................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTAATGTA................................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGTCGAATCGCTCATGGC...................................................................................................................... 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................CGGACTCTACACCCACAAGCTCTAT.............. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TCTACACCCACAAGCTCTATGCAGA......... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................GATGCGCGTGAGTATTAAT............................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................CTACACCCACAAGCTCT................ 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTAGCGAATCGCTCATGGC...................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................AATAATAGGGATACGTTTTTGTAATA..................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TCCTAGTTATTGGCGAATTGCTCATTGC...................................................................................................................... 28 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................GGCTGACCCGATGCGCG........................................................................................................ 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................AATTAATAGGGATACGTTTTTGTAATAAA................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATCGCTCAG......................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................TGACCCGATGCGCGT....................................................................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................AATAGGGATACGTTTTTGTAATAAATT................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ACGTACTCTACACCCACAAGCTCTAT.............. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................TATTAATTAATAGGGATACGTTTT............................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATCGCTAA.......................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................AAATAGGGATACGTTTTTGTAATA..................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTATTTGTAATAAATA................................................................. 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAACAGGGATACGTTTTTGTAATAAATA................................................................. 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAAACGCTCATGGC...................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................ACACAGGAGCGCCCAT........................................ 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TACTAGTTATTGGCGAATCGCTCAA......................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................GGAGCGCCCATACGTAC.................................. 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................AAGCTCTATGCAGATGGACT... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................CCGATGCGCGTGAGTATTA............................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTAATAGGGATACGTTTTTGTAAA...................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TTGTAATAAATAACGCGCTTCACAC.................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TAGGGATACGTTTTTGTAAAAAAA.................................................................. 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................TGACCCGATGCGCGTGAG.................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TAACGCGCTTCACACAG.................................................. 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TACCAGTTATTGGCGAATCGCTCA.......................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTAATAAACA................................................................. 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................ATGGCTGACCCGATGCGCGTGAGTAT................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........ACTAGTTATTGGCGAATCGCTCATGG....................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................TACTTACTCTACACCCACAAGCTCTA............... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................ACACAGGAGCGCCCA......................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGACACGTTTTTGTAATAAAT.................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................TATTGGCGAATCGCTCATGGCTGA................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................TATTGGCGAATCGCTCATGGC...................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................AGTAATGATTAATAGGGA.................................................................................... 18 2 3 1.00 3 0 0 0 0 0 0 1 1 1 0 0 0
..........................................CGATGCGCGTGAGTGTTAAT............................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGAATACGTTTTTGTAATAAA................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTAATAAATC................................................................. 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TACTCGTTATTGGCGAATCGCTCA.......................................................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.......TTTACTAGTTATTGGCGAATCGCTCA.......................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................TAATTAATAGGGATACGTT.............................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TAACGCGCTTCACACAGGAGCG............................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................TAACGCGCTTCACACAGGAA............................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................ATACGTACTCTACACCCACAAGCTCT................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTAATAAAC.................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......CCATACTAGTTATTGGCGAATCGCTC........................................................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................GAATCGCTCATGGCTGACC................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTAAG...................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTAATAAAAA................................................................. 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ACGTACTCTACACCCACAAGCTCTATGAA........... 29 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................CGCGCTTCACACAGGAGCGC............................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................TGATGGCTGACCCGATGCGCGTGAG.................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................ATTGGCGAATCGCTCATG........................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TGGTAGGGGTACGTTTTTGTAATAAA................................................................... 26 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................TAGGGATACGTTTTCGTAATAAATAA................................................................ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGAGATACGTTTTTGTAATAA.................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................TGGCGAATCGCTCATG........................................................................................................................ 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................CAATAGGGATACGTTTTTGTAATAAA................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........TACTGGTTATTGGCGAATCGCTCAT......................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGATACGTTTTTGTAATAAC................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................ATGGCTGACCCGATGCGCGTGAGTA.................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................ACAGGAGCGCCCATACGTACT................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................TGACCCGATGCGCGTGAGTT.................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTAATAGGGATACGT............................................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................ATACGTACTCTACACCCACAAGCTCTA............... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................ATGGCTGACCCGATG............................................................................................................ 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TAATAGGGCTACGTTTTTGTAATAAA................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................TGGCTGACCCGATGCGCGAGAGTA.................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................GGCGAATCGCTCATGGCTGAG.................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................TGACCCGATGCGCGTGAGTATA................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ATCATTTAAATGATCAATAACCGCTTAGCGAGTACCGACTGGGCTACGCGCACTCATAATTAATTATCCCTATGCAAAAACATTATTTATTGCGCGAAGTGTGTCCTCGCGGGTATGCATGAGATGTGGGTGTTCGAGATACGTCTACCTGAACC
**************************************************((((((.(((.(((.((.(((......))).)).))).)))...)).))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M053
female body
 O001
Testis
 M025
embryo
 M024
male body		 SRR902008
ovaries
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 M023
head
 SRR553487
NRT_0-2 hours eggs
....................................................................................................GTGTCCTCGCGGGTATGCATGAGA............................... 24 0 1 131.00 131 131 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CGCGCACTCATAATTAATTATCCCTA................................................................................... 26 0 1 60.00 60 55 3 0 0 0 0 2 0 0 0 0 0 0
....................CCGCTTAGCGAGTACCGACTGGGCT.............................................................................................................. 25 0 1 51.00 51 47 3 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TCCTCGCGGGTATGCATGAGAT.............................. 22 0 1 26.00 26 26 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTCCTCGCGGGTATGCATGAGAT.............................. 23 0 1 25.00 25 16 7 2 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TCGCGGGTATGCATGAGA............................... 18 0 1 21.00 21 21 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTCCTCGCGGGTATGCATGAGA............................... 22 0 1 21.00 21 21 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CTCGCGGGTATGCATGAGA............................... 19 0 1 20.00 20 20 0 0 0 0 0 0 0 0 0 0 0 0
........................TTAGCGAGTACCGACTGGGCT.............................................................................................................. 21 0 1 20.00 20 20 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTCCTCGCGGGTATGCATGAGA............................... 23 0 1 19.00 19 19 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TCCTCGCGGGTATGCATGAGA............................... 21 0 1 18.00 18 17 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................CGGGTATGCATGAGAT.............................. 16 0 1 17.00 17 17 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................GTGGGTGTTCGAGATACGTCT......... 21 0 1 16.00 16 15 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................TCGCGGGTATGCATGAGAT.............................. 19 0 1 15.00 15 14 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................CGGGTATGCATGAGA............................... 15 0 1 15.00 15 15 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTCCTCGCGGGTATGCATGAGAT.............................. 24 0 1 13.00 13 7 5 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................CTCGCGGGTATGCATGAGAT.............................. 20 0 1 13.00 13 10 1 0 2 0 0 0 0 0 0 0 0 0
......................GCTTAGCGAGTACCGACTGGGCT.............................................................................................................. 23 0 1 13.00 13 13 0 0 0 0 0 0 0 0 0 0 0 0
.........................TAGCGAGTACCGACTGGGCT.............................................................................................................. 20 0 1 10.00 10 10 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TGTGTCCTCGCGGGTATGCATGAGA............................... 25 0 1 10.00 10 10 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................GTGTCCTCGCGGGTATGCATGAGAT.............................. 25 0 1 9.00 9 9 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................ATGCATGAGATGTGGGTGTTCGAGAT............... 26 0 1 8.00 8 6 0 0 0 0 2 0 0 0 0 0 0 0
.......................CTTAGCGAGTACCGACTGGGCT.............................................................................................................. 22 0 1 8.00 8 8 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................CCTCGCGGGTATGCATGAGAT.............................. 21 0 1 8.00 8 8 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................GTGGGTGTTCGAGATACGT........... 19 0 1 8.00 8 8 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ACGCGCACTCATAATTAATTATCCCTA................................................................................... 27 0 1 7.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0
.....................CGCTTAGCGAGTACCGACTGGGCT.............................................................................................................. 24 0 1 7.00 7 7 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TCGCGGGTATGCATGAGATGTGGGT........................ 25 0 1 5.00 5 2 0 0 0 0 0 0 0 2 1 0 0 0
............................................................................................................................TGTGGGTGTTCGAGATACGTCT......... 22 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0
..........................AGCGAGTACCGACTGGGCT.............................................................................................................. 19 0 1 5.00 5 4 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTCCTCGCGGGTATGCATG.................................. 20 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0
...............................................GCGCACTCATAATTAATTATCCCTA................................................................................... 25 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................CGGGTATGCATGAGATGTGGGTGTT..................... 25 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GTGTTCGAGATACGTCTACCT..... 21 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
............................CGAGTACCGACTGGGCT.............................................................................................................. 17 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................GTGGGTGTTCGAGATACGTCTACCT..... 25 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
...................ACCGCTTAGCGAGTACCGACTGGGCT.............................................................................................................. 26 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................GTGTGTCCTCGCGGGTATGCATGAGA............................... 26 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................GTGGGTGTTCGAGATA.............. 16 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................GTGTCCTCGCGGGTATGCATGAG................................ 23 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TCGCGGGTATGCATGAG................................ 17 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................CCTCGCGGGTATGCATGAGATGTGGGT........................ 27 0 1 4.00 4 3 0 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................CGTGTCCTCGCGGGTATGCATGAGA............................... 25 1 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTCCTCGCGGGTATGCATG.................................. 19 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................GGTATGCATGAGATGTGGGTGTT..................... 23 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GGGTGTTCGAGATACGTCTACCTG.... 24 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AGTGTCCTCGCGGGTATGCATGAGA............................... 25 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
...........................GCGAGTACCGACTGGGCT.............................................................................................................. 18 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................GGTATGCATGAGATGTGGGTGT...................... 22 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................GGGTATGCATGAGATGTGGGTGTT..................... 24 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................GGGTATGCATGAGATGTGGGTGT...................... 23 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CGCGCACTCATAATTAA............................................................................................ 17 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................GGGTATGCATGAGAT.............................. 15 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GGTGTTCGAGATACGTCTACCT..... 22 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
....................ATGCTTAGCGAGTACCGACTGGGCT.............................................................................................................. 25 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TGTGGGTGTTCGAGATACGT........... 20 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................GCAAAAACATTATTTATTGCGCGAAGT....................................................... 27 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
....................CCGCTTAGCGAGTACCGACTG.................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................GCGGGTATGCATGAGATGTGGGTGT...................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CGCGCACTCATAATTAATTA......................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGCGCGAAGTGTGTCCTCG.............................................. 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................GTGTCCTCGCGGGTATGCATG.................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TGTGGGTGTTCGAGATACGTCTACCT..... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GGGTGTTCGAGATACGTCTACCT..... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TCCTCGCGGGTATGC..................................... 15 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................AGTGTGTCCTCGCGGGTATGCATGAG................................ 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..................AACCGCTTAGCGAGTACCGACTGGGCT.............................................................................................................. 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GGGTGTTCGAGATACGTCTACCTGAA.. 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................CGCGGGTATGCATGAGAT.............................. 18 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GGGTGTTCGAGATACGTCTACCTGA... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CGCGCACTCATAATTA............................................................................................. 16 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TGGGTGTTCGAGATACGTCTACCTG.... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ATGTGGGTGTTCGAGATACGTCT......... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CTCGCGGGTATGCATGA................................. 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TGGGTGTTCGAGATACGTCTA........ 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CGAAGTGTGTCCTCGCGGGTA........................................ 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ACGCGCACTCATAATTAATT.......................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................CCTCGCGGGTATGCATGAGA............................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CGAAGTGTGTCCTCGCGGGT......................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................AGTCCTCGCGGGTATGCATGAGA............................... 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TGTGGGTGTTCGAGATA.............. 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGAGATGTGGGTGTTCGAGA................ 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TGGGTGTTCGAGATACGT........... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................GTATGCATGAGATGTGGGTGT...................... 21 0 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................AATGTCCTCGCGGGTATGCATGAGA............................... 25 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGCGCGAAGTGTGTCCTCGCGGGTAT....................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GAGATGTGGGTGTTCGAGATACGTCT......... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTCCTCGCGGGTATGCA.................................... 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...................TCCGCTTAGCGAGTACCGACTGGGCT.............................................................................................................. 26 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................CGGGTATGCATGAGATGTGGGTGT...................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...............................GTACCGACTGGGCTACGCGCACTCAT.................................................................................................. 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................GAAGTGTGTCCTCGCGGGTATGCAT................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CGCGCACTCATAATTAATTAT........................................................................................ 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
....................CCGCTTAGCGAGTACCGACTGGG................................................................................................................ 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................ATGTCCTCGCGGGTATGCATGAGA............................... 24 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................CGAGATACGTCTACCTG.... 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................CGCGGGTATGCATGAGATGTGGGT........................ 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CATAATTAATTATCCCTA................................................................................... 18 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GGTGTTCGAGATACGTCT......... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CGCGCACTCATAATTAATTATCCGTA................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................AGTGTCGTCGCGGGTATGCATGAGA............................... 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................GGAGATACGTCTACCTGA... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TGCATGAGATGTGGGTGTTCGAGAT............... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TCCTCGCGGGTATGCATG.................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................TAGCGAGTACCGACTGGGCC.............................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GAGATGTGGGTGTTCG................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................ACCGCTTAGCGAGTA......................................................................................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................AGTGTGTCCTCGCGGGTAT....................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CGAAGTGTGTCCTCGCGGGTATGCAT................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CTCGCGGGTATGCATGAGC............................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TTATGGGTGTTCGAGATACGT........... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ACGCGCACTCATAATTAATTATCC...................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................GTGGGTGTTCCAGATACG............ 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................TACGCGCACTCATAATTAATTATCCCTA................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ATGTGGGTGTTCGAGATACGTCTACCTG.... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................GCGGGTATGCATGAGATGTGGGTTAACGA.................. 29 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................ATGCATGAGATGTGGGTGTTCG................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CGCGCACTCATAATTAATT.......................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CTCGCGGGTATGCATGAG................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................ACATTATTTATTGCGCGAAGTGTGT................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TCGAGATACGTCTACCTGAA.. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................GGTCCTCGCGGGTATGCATGAGAT.............................. 24 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................CGTCCTCGCGGGTATGCATGAGA............................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................AGTCCTCGCGGGTATGCATGAGAT.............................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GGGTGTTCGAGATACGTCT......... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................CTGCTTAGCGAGTACCGACTGGGCT.............................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTCGAGATACGTCTACCTGAA.. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................GTGTCCTCGCGGGTATGCATGAGATGT............................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AGGGTATGCATGAGAT.............................. 16 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TGTTCGAGATACGTC.......... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTCCTCGCGGGTATGCATGAG................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ACGCGCACTCATAATTA............................................................................................. 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................CGAGATACGTCTACCT..... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................GAGATTGCATGAGATGTGGGTGTT..................... 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TTGGTGTTCGAGATACGTCT......... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................ATGCAAAAACATTATTTATTG............................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................CCGCTTAGCGAGTACCGACTGGCCT.............................................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................GTGTCCTCGCGGCTATGCATGAGA............................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....TTAAATCATCAATAACCGCTTAGCGAGT.......................................................................................................................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GTGTTCGAGATACGTCTACCTG.... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CGCGCACTCATAATTAATTATCCCT.................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................ATGCATGAGATGTGGGTGTT..................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................AACCGCTTAGCGAGTACCGACTGGG................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................TTGCTTAGCGAGTACCGACTGGGCT.............................................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................TTATTTATTGCGCGAAGTGTGT................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CGCGCACTCATAATTAATTATCACTA................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................CCGCTTAGCGAGTACCG...................................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................ACTTAGCGAGTACCGACTG.................................................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTCCTCGCGGGTATACATGAGAAG............................. 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................GAAGTGTGTCCTCGCGGGT......................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGAGATGTGGGTGTTCGAGAT............... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................CGGGTATGCATGAGATG............................. 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................AGCTTAGCGAGTACCGACTGGGCT.............................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................CCTCGCGGGTATGCATG.................................. 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................TTAGCGAGTACCGACTGGGC............................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GTCCTCGCGGGTATGC..................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................GCGGGTATGCATGAGA............................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................TTAGCGGGTACCGACTGGGCT.............................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................ATACGTCTACCTGAA.. 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TGGGCTACGCGCACTCATAAT............................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................TATGCTTAGCGAGTACCGACTGGGCT.............................................................................................................. 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....TTAAATGATCAATAACCGCTTAGCGAGT.......................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................CCGCTTAGCGGGTACCGACTGGGC............................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................ATGAGATGTGGGTGTTCGAGAT............... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................GTGTCCTCGCGGGTATGCATGACA............................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TAGTCCTCGCGGGTATGCATGAGAT.............................. 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CGCGTACTCATAATTAATTATCACTA................................................................................... 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................GTGTCCTCGCTGGTATGCATGAGA............................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ATGTGGGTGTTCGAGAT............... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TGTGTCCTCGCGGGTATGCATGAGAT.............................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TGTTCGAGATACGTCTACCT..... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................ATGAGATGTGGGTGTTCGAGATGCGT........... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................GTTCGAGATACGTCTACCTGA... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TCGAGATACGTCTACC...... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGAGATGTGGGTGTT..................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................GTGTCCTCGCGGGTATG...................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................GTGTACTCGCGGGTATGCATAAGA............................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AGATGTGGGTGTTCGAGAT............... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................ATGTGTCCTCGCGGGTATGCATGAGA............................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................GTTCGAGATACGTCTACCTG.... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CTCGCGGGTATGCATGATA............................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TGTGTCCTCGCGGGTATGC..................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTCCTCGCGGGTATGC..................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GAGATGTGGGTGTTCGAGAT............... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................ACGCGCACTCATAATTAATTAT........................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................GTGGGTGTTCGAGATACCTCT......... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................GAGATGTGGGTGTTCGAGATACGT........... 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................AGGGTATGCATGAGATGTGGGTGTT..................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................ATGGGTGTTCGAGATACGTCT......... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................GAGTACCGACTGGGCTACGCGCACT..................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................TTAGCGAGTACCGACTG.................................................................................................................. 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................AACCGCTTAGCGAGTACCGACTG.................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................ATGGTCCTCGCGGGTATGCATGAGAT.............................. 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................TGCGCGAAGTGTGTCCTCGCG............................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................ACGAAGTGTGTCCTCGCGGGTATGCAT................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GTGGTCCTCGCGGGTATGCATGAGAT.............................. 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TGGGTATGCATGAGATGTGGGTGT...................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CAGTGTGTCCTCGCGGGTATG...................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTCCTCGCGGGTATGCATGAAA............................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GTGTTCGAGATACGTCTACCTGA... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................TGCTTAGCGAGTACCGACTGGGCT.............................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTCCTCGCGGGTATG...................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................CCGCTTAGCGAGTACCGACTGGGTT.............................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................TAGCGAGTACCGACTGGG................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GGTGTTCGAGATACGTCTACCTGAA.. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................GTGTCCTCGCGGGCATGCATGAG................................ 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TTATTGCGCGAAGTGTGT................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................CGCGGGTATGCATGAGATGTGGGTGT...................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................GTGTCCTCTCGGGTATGCATGAGA............................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTCCTCGCGGGTATGCA.................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GCATGAGATGTGGGTGTTCGAGAT............... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................GTGTCCTCGCGGGTATGCAT................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..CATTTAAATGATCAATAACCGCTT................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TGTGGGTGTTCGAGAT............... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................ACCGCTTAGCGAGTACC....................................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................GTATGCATGAGATGTGGGTGTTCG................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTCCTCGCGGGTATGCATGA................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GGAGATGTGGGTGTTCGAGATACGT........... 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................CGCGGGTATGCATGAGA............................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................GTGTCCTCGCGGGTAT....................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AGGTGGGTGTTCGAGATACGTCTACCT..... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TGGGTGTTCGAGATACGTCTACCT..... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TCTCGCGGGTTTGCATGAGA............................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................ACCGCTTAGCGAGTACCGA..................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................CCGCTTAGCGAGTACCGA..................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CGCGCACTCATAATTAATTATCCCCA................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................CGTTAGCGAGTACCGACTGGGCT.............................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TTGTCCTCGCGGGTATGCATGAGAT.............................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TTGTGTTCGAGATACGTCT......... 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................GCGAGTACCGACTGGACT.............................................................................................................. 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TGTGGGTGTTCGAGATACGTCTACCTG.... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................CTTGTGTGTCCTCGCGGGTATGCATGAGA............................... 29 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................GGTATGCATGAGATGTGGG......................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................GTCCGAGATACGTCTACCTG.... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................TGAGCTTAGCGAGTACCGACTGGGCT.............................................................................................................. 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................GCGGGTATGCATGAGATGTGGGTGTT..................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GTGTTCGAGATACGTCTACCTGAA.. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGAGATGTGGGTGTTCGAGATACGT........... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................TTAGCGAGTGCCGACTGGGCT.............................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................TAGCGGGTACCGACTGGGCT.............................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................GTGTCCTCGCGGGTATGCATGAGG............................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................GCATGAGATGTGGGTG....................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CGCGCACTCATAATTAATTATCC...................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CCCTCGCGGGTATGCATGAGA............................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TACTGGGTGTTCGAGATACGT........... 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................AGCGAGTACCGACTGGG................................................................................................................ 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................ATCCTCGCGGGTATGCAT................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CTCGCGGGTATGCATGAGATG............................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................CGACTGGGCTACGCGCACTCAT.................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TCCTCGCGGGTGTGCATGAGAT.............................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................AGTGTGTCCTCGCGGGTATGCAT................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................TGCAAAAACATTATTTATTGCGCGA.......................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ATGTGGGTGTTCGAGATACGT........... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TCCTCGCGGGTATGCATGA................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TGTCCTCGCGGGTATGGA.................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................ACTCATAATTAATTATCCCTA................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........................ACAGCGAGTACCGACTGGGCT.............................................................................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..CATTTAAATGATCAATA........................................................................................................................................ 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................AGTGGGCCACGCGCACTCAT.................................................................................................. 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................CCGGCGAGTACCGACTGGGCT.............................................................................................................. 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................ATGAGATGTGGGTTTTCT................... 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................ACCGCCTGGGCTATGC.......................................................................................................... 16 2 19 0.16 3 0 0 0 0 0 0 0 0 0 0 3 0 0
.......................................................................................................TCCTCGGGGGTAGGCAT................................... 17 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TCACTAGGCAAGAACATTA...................................................................... 19 3 18 0.11 2 0 0 0 0 1 0 0 0 0 0 0 1 0
....................................GACTGCGCAACGCGCTCT..................................................................................................... 18 3 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TGTCGGTGTTCGAGATTGG............ 19 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.........................................................................................................................AGATGTGGGAGATCCAGA................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................GTCGTCGCCGGTATGGATGA................................. 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:15169-15323 - dsi_1221 TAGTAAATTTACTAGTTATTGGCGAATCGCTCATGGCTGACCCGATGCGCGTGAGTATTA---ATTA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAATAA----------------C--GCG-CTTCACACAGGAGCGCCCATACGTACTCTACACCCACAAGCTCTATGCAGATGGACTTGG
droSec2 scaffold_14:28925-29079 - TAGTAAATTTACTAGTTATTGGCGAATCGCTCATGGCTGACCCGATGCGCGTGAGTATTA---ATTA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAATAA----------------C--GCG-CTTCACACAGGAGCGCCCATACGTACTCTACACCCACAAGCTCTATGCAGATGGACTTGG
dm3 chr2L:23824-23978 - TTGTAAATTTACTAGTTATTGGGGAATCGCTCATGGCTGACCCGATGCGCGTGAGTATTG---CTTA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AACAAATAA------------------TGCG-CTTCACACAGGAGCGCCCATACGTACTCTACACCCACAAGCTCTATGCAGATGGACTTGG
droEre2 scaffold_4929:50162-50323 - TAGTTAATTTACTAGTTATTGGGGAATCACTAATGGCTGATCCGATGCGCGTGAGTATAA---ATTA-A-----CAT-GAAT------------------------------TTCATTTACGTATTTCTAATAAATAA------------------CACC-CTTTACACAGGAGCGCCCATACGTGCTCTACACCCACAAGCTCTATGCAGATGGACTTGG
droYak3 2L:18600-18765 - TAGTAAATTTGCTAGTTATTGGAGAGTCACTAATGGCTGATCCGATGCGCGTGAGTATAA---ATTA---------------------------------TGTAACATCGATTTCATTTATCTATTTCTATTAATTAA------------------CACT-CTCTGCACAGGAGCGCCCATACGTGCTCTACACCCACAAGCTCTATGCAGATGGACTTGG
droEug1 scf7180000409154:20715-20876 - TAGTAAATTTACTAGTTATTGGCGAATCTTTAATGGCTGATCCAATGCGCGTGAGTACAC---GTAA-A-TTTATAATAGAC-----------AAATACGAA------------------------------------------TGACGTTAAACACACC-ATCGTTACAGGAACGCCCCTACGTGCTATACACCCACAAGCTATATGCAGATGGCCTTGG
droBia1 scf7180000301455:28775-28930 - TAGTAAATTTACTAGTAATTGGAGAATCTCTAATGGCTGATCCAATGCGCGTGAGTATAA---TTAA-A-----TA----TT-----------GCATTTTTGT--------------------------A--------------TGATATTGGACTTACC-TTTATGACAGGAGCGCCCTTACGTTTTATACACCCATAAACTTTACGCTGACGGTCTTGG
droTak1 scf7180000412120:903-1059 + TAGTAAATTTACTCGTTATCGGAGAGTCACTAATGGCTGACCCAATGCGCGTATGTAAA---------A-TGAATATTGAAC-----------ACATATCTG------------------------------------------TGATATTGGACTTACC-TTCTTAACAGGAGCGCCCATACGTTCTCTACACCCACAAGCTGTACGCAGATGGCCTTGG
droEle1 scf7180000490216:15504-15660 + TAGTAAATTTACTCGTTATCGGAGAGTCACTAATGGCTGACCCAATGCGCGTATGTAAA---------A-TGAATATTGAAC-----------ACATATCTG------------------------------------------TGATATTGGACTTACC-TTCTTAACAGGAGCGCCCATACGTTCTCTACACCCACAAGCTGTACGCAGATGGCCTTGG
droRho1 scf7180000779252:107042-107207 + TAGTAAATTTACTAGTTATCGGAGAGTCACTAATGGCTGACCCAATGCGCGTGAGTAAAA----------TAAATATTGAACATATTTAAT--ATATACGTA------------------------------------------TGAAATTGGACTCACC-TTGTTCACAGGAGCGTCCCTACGTGCTCTACACCCATAAGCTTTACGCAGATGGCCTTGG
droFic1 scf7180000453904:1456404-1456570 - TTGTTAATTTGTTGGTAATTGGCGAGTCTCTTATGGCCGATCCAATGCGCGTGAGTATCG---AGTG-T-TGAATAAAAAAT--A---CGAATATGCGTCCAT--------------------------AA-----------------AATAGACTGAAC-TAAACCACAGGAGCGTCCCTACGTACTGTACACCCACAAACTGTACGCTGATGGCCTCGG
droKik1 scf7180000302401:437517-437669 - TTGTCAATTTGCTGGTCATAGGAGAATCCCTTATGGCCGACCCATTGCGAGTGAGTAGGA---GT-GCTTTGATTAA-GGAAATATTT--------------------------------------------AAA-------------C-----TTTACT-TCTGCCACAGGAGCGTCCTTACGTGCTGTACACCCACAAGCTGTACGCAGATGGCCTCGG
droAna3 scaffold_12916:2008330-2008481 - TCGTGAACTTGCTGGTCATTGGAGAGTCCCTGATGGCAGACCCTCTTCGAGTAAGTATGGAAAGGTA-A-TGGTTATCCAAA------------------------------------------------------------------ATC-CATTTAAATTTCCGCGCAGGAGCGTCCTTATGTTCTGTACACCCACAAGCTCTACGCCGACGGCCTGGG
droBip1 scf7180000396728:662442-662592 - TCGTGAACTTGCTGGTCATTGGAGAGTCCTTGATGTCGGACCCCCTTCGAGTAAGTATGGCAAGGTA-A-TAAATATTGAAA------------------------------------------------------------------C-CCGACTCATC-TGCGCTGCAGGAGCGTCCCTATGTTCTGTACACCCACAAGTTGTACGCCGACGGCCTGGG
dp5 4_group2:122483-122638 + TTGTGAATTTACTCGTTATTGGGGAGTCGCTGATGGCGGATCCAATGCGAGTAAGTACAA---GCTT-A-----TAA-TAAT-----------GCATTCCTT------------------------------------------GGAGATT-CACTCACC-TTTGTCGTAGGAGCGTCCGTACGTATTGTACACCCACAAGCTGTACGCAGATGGTCTCGG
droPer2 scaffold_8:3772141-3772296 - TTGTGAATTTACTCGTTATTGGGGAGTCGCTGATGGCGGATCCAATGCGAGTAAGTACAA---GCTT-A-----TAA-TAAT-----------GCATTCCTT------------------------------------------GGAGATT-CACTCACC-TTTGTCGTAGGAGCGTCCGTACGTATTGTACACCCACAAGCTGTACGCAGATGGTCTCGG
droWil2 scf2_1100000004590:4048194-4048358 + TTGTCAATCTCTTGGTCATTGGAGAGTCTCTGATGACTGATACTGTGAGGGTGAGTATGG---AGTA-A-----TTC------------------CTTTCCGA--------------------------TTCGAATAATTCGAATGTTGTTT---TTTTTTTTACCAAAAGGAACGCCCTTATGTTCTATACACGCATAAACTTTACGCTGATGGCCTGGG
droVir3 scaffold_12970:7661820-7661873 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGGAGCGGCCCTTTGTGCTATACACGCATAAACTGTATGCGGATGGCCTGGG
droMoj3 scaffold_6482:2015708-2015760 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGAGCGACCCTATGTCCTATATACGCACAAGTTATATGCAGATGGTCTAGG
droGri2 scaffold_15203:11320712-11320764 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGAGCGCCCTTATGTGCTATACACACACAACCTGTATGCGGATGGCTTGGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TAGTAAATTTACTAGTTATTGGCGAATCGCTCATGGCTGACCCGATGCGCGTGAGTATTA---ATTA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAATAA----------------C--GCG-CTTCACACAGGAGCGCCCATACGTACTCTACACCCACAAGCTCTATGCAGATGGACTTGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................TA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAA......................................................................................2611265.0012650084800000011862300000
.........TACTAGTTATTGGCGAATCGCTCA............................................................................................................................................................................................241221.0022100032000000185400000
.................................................................TA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAA.......................................................................................251179.001790041000000173100000
.........TACTAGTTATTGGCGAATCGCTCATGGC........................................................................................................................................................................................281104.0010400572900000012600000
.....................................................................................................................................................................................ACGTACTCTACACCCACAAGCTCTA...............25182.008200111860000047000000
.................................................................TA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATA........................................................................................24168.0068000300000061400000
................................................................TTA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAA......................................................................................27163.0063000200000061000000
.........TACTAGTTATTGGCGAATCGCTCAT...........................................................................................................................................................................................25158.0058000310000053100000
.................................................................TA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAATA....................................................................................28157.0057000300000051300000
..........................................................................TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAATA....................................................................................25151.0051001000000049100000
..........................................................................TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAATAA----------------...................................................................26148.0048000000000047100000
.................................................................TA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAAT.....................................................................................27147.0047000000000047000000
....................................................................................................................................................................................TACGTACTCTACACCCACAAGCTCTA...............26139.0039004300000031010000
.....................................................................................................................................................................................ACGTACTCTACACCCACAAGCTCT................24136.0036001310000030100000
.........TACTAGTTATTGGCGAATCGCTCATG..........................................................................................................................................................................................26132.0032000400000028000000
.....................................................................................................................................................................................ACGTACTCTACACCCACAAGCTCTATG.............27128.0028002710000000000000
....................................................................................................................................................................................TACGTACTCTACACCCACAAGCTC.................24128.0028001000000027000000
.................................TGGCTGACCCGATGCGCGTGAGT.....................................................................................................................................................................23124.0024000110000022000000
.................................................................TA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AAT.........................................................................................23119.0019000000000019000000
.....................................TGACCCGATGCGCGTGAGTATTA---AT............................................................................................................................................................25119.0019000200000016100000
.....................................................................................................................................................................................ACGTACTCTACACCCACAAGCTCTATGC............28118.001800990000000000000
..........................................................................TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAA......................................................................................23116.0016000100000015000000
.........TACTAGTTATTGGCGAATCGCTCATGGCT.......................................................................................................................................................................................29116.0016001600000000000000
.................................TGGCTGACCCGATGCGCGTGAGTA....................................................................................................................................................................24115.0015000100000014000000
.............AGTTATTGGCGAATCGCTCA............................................................................................................................................................................................20113.0013000000000013000000
.................................TGGCTGACCCGATGCGCGTGAGTAT...................................................................................................................................................................25113.001300030000009100000
.....................................................................................................................................................................................ACGTACTCTACACCCACAAGCTC.................23113.001300540000004000000
.................................................................TA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAAA.....................................................................................27112.0012000000000012000000
.................ATTGGCGAATCGCTCA............................................................................................................................................................................................16112.0012000000000012000000
.........TACTAGTTATTGGCGAATCGCTCATGG.........................................................................................................................................................................................27112.001200040000006200000
....................................................................................................................................................................................TACGTACTCTACACCCACAAGCTCT................25112.0012000000000012000000
.................................TGGCTGACCCGATGCGCGTGAG......................................................................................................................................................................22111.0011000000000011000000
.....................................TGACCCGATGCGCGTGAGT.....................................................................................................................................................................19111.0011000000000011000000
.....................................................................................................................................................................................ACGTACTCTACACCCACAAGCT..................22111.001100110000009000000
................................................................TTA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAA.......................................................................................26111.0011000000000011000000
.................................TGGCTGACCCGATGCGCGTGAGTATT..................................................................................................................................................................26110.001000040000006000000
.........TACTAGTTATTGGCGAATCGCTC.............................................................................................................................................................................................23110.001000100000008100000
.................................................................TA-A-----TAG-GGAT-----------ACGTT...........................................................................................................................15110.0010000000000010000000
...........................................................A---ATTA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AA..........................................................................................2519.00900000000009000000
...................................................................................................................................................................................ATACGTACTCTACACCCACAAGCTC.................2519.00900000000009000000
...............TTATTGGCGAATCGCTCA............................................................................................................................................................................................1819.00900000000009000000
.................................................................TA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAT......................................................................................2619.00900000000008100000
.....................................TGACCCGATGCGCGTGAGTATT..................................................................................................................................................................2218.00800002000006000000
................TATTGGCGAATCGCTCATGGCTGACC...................................................................................................................................................................................2618.00800400000004000000
.........TACTAGTTATTGGCGAATCGC...............................................................................................................................................................................................2117.00700003000003100000
....................................................................................................................................................................................TACGTACTCTACACCCACAAGCT..................2317.00700200000005000000
.....................................TGACCCGATGCGCGTGAGTATTA---ATTA-.........................................................................................................................................................2717.00700200000005000000
.........TACTAGTTATTGGCGAATC.................................................................................................................................................................................................1917.00700001000006000000
.....................................................................................................................................................................................ACGTACTCTACACCCACAAGC...................2116.00600006000000000000
.....................................TGACCCGATGCGCGTGAGTATTA---A.............................................................................................................................................................2416.00600010000005000000
.................................TGGCTGACCCGATGCGC...........................................................................................................................................................................1716.00600000000006000000
.................................................................TA-A-----TAG-GGAT-----------ACGTTT..........................................................................................................................1616.00600000000006000000
.................................................................TA-A-----TAG-GGAT-----------ACGTTTT.........................................................................................................................1716.00600000000006000000
..............GTTATTGGCGAATCGCTCA............................................................................................................................................................................................1916.00600000000006000000
.....................................TGACCCGATGCGCGTGAGTAT...................................................................................................................................................................2116.00600000000006000000
.........TACTAGTTATTGGCGAATCGCT..............................................................................................................................................................................................2216.00600030000003000000
.....................................................................................................................................................................................ACGTACTCTACACCCACAA.....................1916.00600006000000000000
..........................................................TA---ATTA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AA..........................................................................................2616.00600000000005100000
.........TACTAGTTATTGGCGAA...................................................................................................................................................................................................1715.00500000000005000000
.................ATTGGCGAATCGCTCAT...........................................................................................................................................................................................1715.00500000000005000000
.................................................................TA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAG......................................................................................2615.00500010000004000000
.................................TGGCTGACCCGATGCGCGT.........................................................................................................................................................................1915.00500000000005000000
.............AGTTATTGGCGAATCGCTCAT...........................................................................................................................................................................................2115.00500000000005000000
...........................................................................................................................................................................................TCTACACCCACAAGCTCT................1815.00500000000005000000
................................................................TTA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AAT.........................................................................................2415.00500000000005000000
..........................................................................TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAAT.....................................................................................2415.00500000000005000000
..................................................................A-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAA......................................................................................2515.00500030000002000000
.....................................TGACCCGATGCGCGTGAGTA....................................................................................................................................................................2015.00500000000005000000
.....................................................................................................................................................................................................CAAGCTCTATGCAGATGGACT...2114.00400300000001000000
....................................................................A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAATA....................................................................................2614.00400000000004000000
.................................................................TA-A-----TAG-GGAT-----------ACGTTTTT........................................................................................................................1814.00400000000004000000
.........TACTAGTTATTGGCGAAT..................................................................................................................................................................................................1814.00400002000002000000
.................................TGGCTGACCCGATGCGCG..........................................................................................................................................................................1814.00400000000004000000
.......................................................................................................................................TAA----------------C--GCG-CTTCACACAGGAG...............................................2014.00400000000003100000
.................................TGGCTGACCCGATGCGCGTG........................................................................................................................................................................2014.00400000000004000000
................TATTGGCGAATCGCTCA............................................................................................................................................................................................1714.00400000000004000000
........................................................................................................................................................................................TACTCTACACCCACAAGCTCTATGCAGA.........2814.00400010000003000000
.................................................................................T-----------ACGTTTTTGT--------------------------AATAAATAA----------------C--GCG-CT..........................................................2614.00400000000004000000
.....................................TGACCCGATGCGCGTG........................................................................................................................................................................1613.00300000000003000000
.................................................................TA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------A...........................................................................................2113.00300002000001000000
............TAGTTATTGGCGAATCGCTCATGGC........................................................................................................................................................................................2513.00300000000003000000
.................................TGGCTGACCCGATGCGCGTGA.......................................................................................................................................................................2113.00300000000003000000
...................TGGCGAATCGCTCATGGCTGACCCGA................................................................................................................................................................................2613.00300000000003000000
..................................................................A-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAATA....................................................................................2713.00300010000002000000
..........ACTAGTTATTGGCGAATCGCTCA............................................................................................................................................................................................2313.00300020000001000000
.........TACTAGTTATTGGCGAATCGCTCATGGG........................................................................................................................................................................................2813.00300300000000000000
......................................................................................................................................................................................CGTACTCTACACCCACAAGCTCTA...............2413.00300030000000000000
............TAGTTATTGGCGAATCGCTCATG..........................................................................................................................................................................................2313.00300000000003000000
....................................................................A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAAT.....................................................................................2513.00300000000003000000
............TAGTTATTGGCGAATCGCTCA............................................................................................................................................................................................2112.00200000000002000000
..................................................................................................................................................................TTCACACAGGAGCGCCCATACGTACTC................................2712.00200010000000100000
.....................................TGACCCGATGCGCGTGAGTATTA---AA............................................................................................................................................................2512.00200010000001000000
...................................................................................................................................................................................................CACAAGCTCTATGCAGA.........1712.00200000000002000000
.................................TGGCTGACCCGATGCGCGTGAAA.....................................................................................................................................................................2312.00200010000001000000
..................................................................A-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAAT.....................................................................................2612.00200000000002000000
..............GTTATTGGCGAATCGCTCATG..........................................................................................................................................................................................2112.00200000000002000000
..........ACTAGTTATTGGCGAATCGCTCATGGC........................................................................................................................................................................................2712.00200020000000000000
.........................................................................................................................................................................................ACTCTACACCCACAAGCTCTA...............2112.00200000000002000000
.............................................TGCGCGTGAGTATTA---ATTA-A-----TAG-GGA............................................................................................................................................2612.00200000000002000000
......................................GACCCGATGCGCGTGAGTAT...................................................................................................................................................................2012.00200000000002000000
....................................................................A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAATAA----------------...................................................................2712.00200000000002000000
.....................................................................................................................................................................................ACGTACTCTACACCCACAAGCTCTT...............2512.00200020000000000000
..........................................................................TAG-GGAT-----------ACGTTTTTGT--------------------------AATAA.......................................................................................2212.00200000000002000000
.......................................................................................................................................TAA----------------C--GCG-CTTCACACAGGA................................................1912.00200000000001100000
..........................TCGCTCATGGCTGACCCGATGCGC...........................................................................................................................................................................2412.00200000000002000000
............................................ATGCGCGTGAGTATTA---AT............................................................................................................................................................1812.00200000000002000000
.............AGTTATTGGCGAATCGCTCATG..........................................................................................................................................................................................2212.00200000000002000000
...................................GCTGACCCGATGCGCGTGAG......................................................................................................................................................................2012.00200000000002000000
.......................................................................................................................................TAA----------------C--GCG-CTTCACACAGGAGC..............................................2112.00200000000002000000
...........................................GATGCGCGTGAGTATT..................................................................................................................................................................1612.00200000000002000000
..................TTGGCGAATCGCTCATGGCTGACCCGA................................................................................................................................................................................2712.00200010000001000000
.............................................................................................................................................................................................TACACCCACAAGCTCTATGCAGATGGAC....2812.00200000000002000000
............................................................................................................................................................................................CTACACCCACAAGCTC.................1612.00200000000002000000
.........TACTAGTTATTGGCG.....................................................................................................................................................................................................1512.00200000000002000000
...............................................CGCGTGAGTATTA---ATTA-A-----TAG-GGA............................................................................................................................................2412.00200000000002000000
.....................................................................................................................................................................................ACGTACTCTACACCCACAAGCTCTATGCA...........2912.00200110000000000000
.....................................TGACCCGATGCGCGTGAGTATTA---..............................................................................................................................................................2312.00200000000002000000
.................................TGGCTGACCCGATGCGCGTGAGTATTA---..............................................................................................................................................................2712.00200010000001000000
............................................................................................................................................................................................CTACACCCACAAGCTCTA...............1812.00200000000001100000
........................................................................................................................................................................CAGGAGCGCCCATACGTACTC................................2111.00100000000001000000
.........TACTAGTTATTGGCGAATCGCTCAC...........................................................................................................................................................................................2511.00100000000001000000
......................................................GTATTA---ATTA-A-----TAG-GGA............................................................................................................................................1711.00100000000001000000
..........................................................................TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAT......................................................................................2311.00100000000001000000
.................................................................TA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AA..........................................................................................2211.00100000000001000000
....................................................................................................................................................................CACACAGGAGCGCCCATACGTACTCTA..............................2711.00100000000001000000
..................................................................................................................................................................TTCACACAGGAGCGCCCATACGTAC..................................2511.00100000000001000000
....................GGCGAATCGCTCATGGCTGAC....................................................................................................................................................................................2111.00100000000001000000
....................................................................................................................................................................................TACGTACTCTACACCCACAAGCAT.................2411.00100000000001000000
.....................................TGACCCGATGCGCGTGAGTATTA---AAA...........................................................................................................................................................2611.00100000000001000000
.............................................................................................................................................................................................TACACCCACAAGCTCTATGCAGATGGACT...2911.00100010000000000000
...........................................GATGCGCGTGAGTATTA---..............................................................................................................................................................1711.00100000000001000000
.........................................................................................................................................A----------------C--GCG-CTTCACACAGGAGC..............................................1911.00100000000001000000
..................................GGCTGACCCGATGCGCGTGAGTA....................................................................................................................................................................2311.00100010000000000000
.............AGTTATTGGCGAATCGCTC.............................................................................................................................................................................................1911.00100000000001000000
..........................................................................................................................................................................GGAGCGCCCATACGTACTC................................1911.00100000000001000000
..........................................................................................................................................................................GGAGCGCCCATACGTA...................................1611.00100000000001000000
.................................................................TA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------............................................................................................2011.00100000000001000000
..........................................................................TAG-GGAT-----------ACGTTTTTGT--------------------------AATA........................................................................................2111.00100000000001000000
................................................................TTA-A-----TAG-GGAT-----------ACGTT...........................................................................................................................1611.00100000000001000000
..................................................................................................................................................................TTCACACAGGAGCGCCCAT........................................1911.00100001000000000000
...................................................................................................................................................................TCACACAGGAGCGCCCAT........................................1811.00100000000001000000
...................................................................................................................................................................................................CACAAGCTCTATGCAGATGGACAC..2411.00100000000001000000
.................................TGGCTGACCCGATGCGCGTGAGTG....................................................................................................................................................................2411.00100000000001000000
..................TTGGCGAATCGCTCAT...........................................................................................................................................................................................1611.00100000000001000000
.................................................................TA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAG.......................................................................................2511.00100000000001000000
...........................................................A---ATTA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AG..........................................................................................2511.00100000000001000000
.....................................................................................................................................................................ACACAGGAGCGCCCATACGTAC..................................2211.00100000000001000000
..................................................................A-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AAT.........................................................................................2211.00100010000000000000
...................................................................................................TTGT--------------------------AATAAATAA----------------C--GCG-CTTCACACA...................................................2611.00100000000001000000
...........................................................A---ATTA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AAT.........................................................................................2611.00100000000001000000
.........................................................................................................................................................................................ACTCTACACCCACAAGCTC.................1911.00100000000001000000
................................................................................AT-----------ACGTTTTTGT--------------------------AATAA.......................................................................................1711.00100000000001000000
..............................TCATGGCTGACCCGATGCGCGTGAG......................................................................................................................................................................2511.00100000000001000000
..........................................................................TAG-GGAT-----------ACGTTTTTGT--------------------------AAT.........................................................................................2011.00100000000001000000
.................................................................................T-----------ACGTTTTTGT--------------------------AATAAATAA----------------C--GCG-CTT.........................................................2711.00100000000001000000
.............................................................................................ACGTTTTTGT--------------------------AATAA.......................................................................................1511.00100000000001000000
....................................................................................................................................................................CACACAGGAGCGCCCA.........................................1611.00100000000001000000
............TAGTTATTGGCGAATCGCTCATGGCT.......................................................................................................................................................................................2611.00100000000001000000
...........................................................................................................................................................................................TCTACACCCACAAGCTCTATGCAGA.........2511.00100000000000100000
...........................................GATGCGCGTGAGTATTA---AT............................................................................................................................................................1911.00100000000001000000
............................................................................................................................................................................................CTACACCCACAAGCTCT................1711.00100000000001000000
..................................GGCTGACCCGATGCGCG..........................................................................................................................................................................1711.00100000000001000000
...........................................................A---ATTA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAA......................................................................................2911.00100000000001000000
.........TACTAGTTATTGGCGAATCGCTCAG...........................................................................................................................................................................................2511.00100000000001000000
.....................................TGACCCGATGCGCGT.........................................................................................................................................................................1511.00100000000001000000
..................................................................A-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAATT....................................................................................2711.00100000000001000000
.....................................................................................................................................................................................ACGTACTCTACACCCACAAGCTCTAT..............2611.00100010000000000000
.......................................................TATTA---ATTA-A-----TAG-GGAT-----------ACGTTTT.........................................................................................................................2411.00100000000001000000
.....................................................................................................................................................................ACACAGGAGCGCCCAT........................................1611.00100000000001000000
.........TACTAGTTATTGGCGAATCGCTCAA...........................................................................................................................................................................................2511.00100010000000000000
..........................................................................................................................................................................GGAGCGCCCATACGTAC..................................1711.00100000000001000000
......................................................................................................................................................................................................AAGCTCTATGCAGATGGACT...2011.00100100000000000000
.........................................CCGATGCGCGTGAGTATTA---..............................................................................................................................................................1911.00100000000001000000
................................................................TTA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AAA.........................................................................................2411.00100000000001000000
...................................................................................................TTGT--------------------------AATAAATAA----------------C--GCG-CTTCACAC....................................................2511.00100000000001000000
.....................................TGACCCGATGCGCGTGAG......................................................................................................................................................................1811.00100000000001000000
.......................................................................................................................................TAA----------------C--GCG-CTTCACACAG..................................................1711.00100000000001000000
................................ATGGCTGACCCGATGCGCGTGAGTAT...................................................................................................................................................................2611.00100000000001000000
..........ACTAGTTATTGGCGAATCGCTCATGG.........................................................................................................................................................................................2611.00100000000001000000
.....................................................................................................................................................................ACACAGGAGCGCCCA.........................................1511.00100000000001000000
................TATTGGCGAATCGCTCATGGCTGA.....................................................................................................................................................................................2411.00100000000001000000
................TATTGGCGAATCGCTCATGGC........................................................................................................................................................................................2111.00100000000001000000
.................................................................TA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAATC....................................................................................2811.00100000000001000000
.......TTTACTAGTTATTGGCGAATCGCTCA............................................................................................................................................................................................2611.00100000000001000000
..........................................................TA---ATTA-A-----TAG-GGAT-----------ACGTT...........................................................................................................................1911.00100000000001000000
.......................................................................................................................................TAA----------------C--GCG-CTTCACACAGGAGCG.............................................2211.00100010000000000000
.......................................................................................................................................TAA----------------C--GCG-CTTCACACAGGAA...............................................2011.00100000000001000000
...................................................................................................................................................................................ATACGTACTCTACACCCACAAGCTCT................2611.00100000000001000000
.................................................................TA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAAC.....................................................................................2711.00100000000001000000
.......................GAATCGCTCATGGCTGACC...................................................................................................................................................................................1911.00100000000001000000
.................................................................TA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AAG.........................................................................................2311.00100000000001000000
..........................................................................................................................................................C--GCG-CTTCACACAGGAGCGC............................................2011.00100000000001000000
.................ATTGGCGAATCGCTCATG..........................................................................................................................................................................................1811.00100000000001000000
...................TGGCGAATCGCTCATG..........................................................................................................................................................................................1611.00100000000001000000
.................................................................TA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAC......................................................................................2611.00100010000000000000
................................ATGGCTGACCCGATGCGCGTGAGTA....................................................................................................................................................................2511.00100100000000000000
.......................................................................................................................................................................ACAGGAGCGCCCATACGTACT.................................2111.00100000000001000000
.....................................TGACCCGATGCGCGTGAGTT....................................................................................................................................................................2011.00100000000001000000
................................................................TTA-A-----TAG-GGAT-----------ACGT............................................................................................................................1511.00100000000001000000
...................................................................................................................................................................................ATACGTACTCTACACCCACAAGCTCTA...............2711.00100000000001000000
................................ATGGCTGACCCGATG..............................................................................................................................................................................1511.00100000000001000000
....................GGCGAATCGCTCATGGCTGAG....................................................................................................................................................................................2111.00100000000001000000
.....................................TGACCCGATGCGCGTGAGTATA..................................................................................................................................................................2211.00100000000001000000
droSec2
TAGTAAATTTACTAGTTATTGGCGAATCGCTCATGGCTGACCCGATGCGCGTGAGTATTA---ATTA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AATAAATAA----------------C--GCG-CTTCACACAGGAGCGCCCATACGTACTCTACACCCACAAGCTCTATGCAGATGGACTTGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................ACGTACTCTACACCCACAAGCTCTATGCA...........2911.0011000
dm3
TTGTAAATTTACTAGTTATTGGGGAATCGCTCATGGCTGACCCGATGCGCGTGAGTATTG---CTTA-A-----TAG-GGAT-----------ACGTTTTTGT--------------------------AACAAATAA------------------TGCG-CTTCACACAGGAGCGCCCATACGTACTCTACACCCACAAGCTCTATGCAGATGGACTTGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................TTG---CTTA-A-----TAG-GGAT-----------ACGTTT..........................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000100000000
................TATTGGGGAATCGCTCATGGC........................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CATGGCTGACCCGATGCGCGTGAG......................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................TAG-GGAT-----------ACGTTTTTGT--------------------------AACAA.......................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
......................................................................................................................................................................CACAGGAGCGCCCATACGTAC..................................2111.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................CGTGAGTATTG---CTTA-A-----TAG-GG.............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................TGACCCGATGCGCGTGAGTATTG---CT............................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TAAATTTACTAGTTATTG........................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CGATGCGCGTGAGTATTG---CTTA-A-----TAG-GG.............................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................TACGTACTCTACACCCACAAGCTCTA...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TTTACTAGTTATTGGGGAATCGCTCATG..........................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ACTAGTTATTGGGGAATCGCTCATG..........................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TTA-A-----TAG-GGAT-----------ACGTTTTAT.......................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...............................CATGGCTGACCCGATGCGCGTGAGT.....................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CATGGCTGACCCGATGCGCGTGAGTA....................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................TACGTACTCTACACCCACAAGC...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................CCATACGTACTCTACACCCACAAGC...................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ACTAGTTATTGGGGAATCGCT..............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................TACGTACTCTACACCCACAAG....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTATTGGGGAATCGCTCATGGCTG......................................................................................................................................................................................2411.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................CATACGTACTCTACACCCACAAGC...................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................TACGTACTCTACACCGGG.......................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TAGTTAATTTACTAGTTATTGGGGAATCACTAATGGCTGATCCGATGCGCGTGAGTATAA---ATTA-A-----CAT-GAAT------------------------------TTCATTTACGTATTTCTAATAAATAA------------------CACC-CTTTACACAGGAGCGCCCATACGTGCTCTACACCCACAAGCTCTATGCAGATGGACTTGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
TAGTAAATTTGCTAGTTATTGGAGAGTCACTAATGGCTGATCCGATGCGCGTGAGTATAA---ATTA---------------------------------TGTAACATCGATTTCATTTATCTATTTCTATTAATTAA------------------CACT-CTCTGCACAGGAGCGCCCATACGTGCTCTACACCCACAAGCTCTATGCAGATGGACTTGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................ATGGCTGATCCGATGCGC...........................................................................................................................................................................1814.00401300000000
.......................GAGTCACTAATGGCTGATCCGATGCGC...........................................................................................................................................................................2711.00110000000000
droEug1
TAGTAAATTTACTAGTTATTGGCGAATCTTTAATGGCTGATCCAATGCGCGTGAGTACAC---GTAA-A-TTTATAATAGAC-----------AAATACGAA------------------------------------------TGACGTTAAACACACC-ATCGTTACAGGAACGCCCCTACGTGCTATACACCCACAAGCTATATGCAGATGGCCTTGGSizeHit CountTotal NormTotal
No Reads
droBia1
TAGTAAATTTACTAGTAATTGGAGAATCTCTAATGGCTGATCCAATGCGCGTGAGTATAA---TTAA-A-----TA----TT-----------GCATTTTTGT--------------------------A--------------TGATATTGGACTTACC-TTTATGACAGGAGCGCCCTTACGTTTTATACACCCATAAACTTTACGCTGACGGTCTTGGSizeHit CountTotal NormTotal
No Reads
droTak1
TAGTAAATTTACTCGTTATCGGAGAGTCACTAATGGCTGACCCAATGCGCGTATGTAAA---------A-TGAATATTGAAC-----------ACATATCTG------------------------------------------TGATATTGGACTTACC-TTCTTAACAGGAGCGCCCATACGTTCTCTACACCCACAAGCTGTACGCAGATGGCCTTGGSizeHit CountTotal NormTotal
No Reads
droEle1
TAGTAAATTTACTCGTTATCGGAGAGTCACTAATGGCTGACCCAATGCGCGTATGTAAA---------A-TGAATATTGAAC-----------ACATATCTG------------------------------------------TGATATTGGACTTACC-TTCTTAACAGGAGCGCCCATACGTTCTCTACACCCACAAGCTGTACGCAGATGGCCTTGGSizeHit CountTotal NormTotal
No Reads
droRho1
TAGTAAATTTACTAGTTATCGGAGAGTCACTAATGGCTGACCCAATGCGCGTGAGTAAAA----------TAAATATTGAACATATTTAAT--ATATACGTA------------------------------------------TGAAATTGGACTCACC-TTGTTCACAGGAGCGTCCCTACGTGCTCTACACCCATAAGCTTTACGCAGATGGCCTTGGSizeHit CountTotal NormTotal
No Reads
droFic1
TTGTTAATTTGTTGGTAATTGGCGAGTCTCTTATGGCCGATCCAATGCGCGTGAGTATCG---AGTG-T-TGAATAAAAAAT--A---CGAATATGCGTCCAT--------------------------AA-----------------AATAGACTGAAC-TAAACCACAGGAGCGTCCCTACGTACTGTACACCCACAAACTGTACGCTGATGGCCTCGGSizeHit CountTotal NormTotal
No Reads
droKik1
TTGTCAATTTGCTGGTCATAGGAGAATCCCTTATGGCCGACCCATTGCGAGTGAGTAGGA---GT-GCTTTGATTAA-GGAAATATTT--------------------------------------------AAA-------------C-----TTTACT-TCTGCCACAGGAGCGTCCTTACGTGCTGTACACCCACAAGCTGTACGCAGATGGCCTCGGSizeHit CountTotal NormTotal
No Reads
droAna3
TCGTGAACTTGCTGGTCATTGGAGAGTCCCTGATGGCAGACCCTCTTCGAGTAAGTATGGAAAGGTA-A-TGGTTATCCAAA------------------------------------------------------------------ATC-CATTTAAATTTCCGCGCAGGAGCGTCCTTATGTTCTGTACACCCACAAGCTCTACGCCGACGGCCTGGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TCGTGAACTTGCTGGTCATTGGAGAGTCCTTGATGTCGGACCCCCTTCGAGTAAGTATGGCAAGGTA-A-TAAATATTGAAA------------------------------------------------------------------C-CCGACTCATC-TGCGCTGCAGGAGCGTCCCTATGTTCTGTACACCCACAAGTTGTACGCCGACGGCCTGGGSizeHit CountTotal NormTotal
No Reads
dp5
TTGTGAATTTACTCGTTATTGGGGAGTCGCTGATGGCGGATCCAATGCGAGTAAGTACAA---GCTT-A-----TAA-TAAT-----------GCATTCCTT------------------------------------------GGAGATT-CACTCACC-TTTGTCGTAGGAGCGTCCGTACGTATTGTACACCCACAAGCTGTACGCAGATGGTCTCGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TTGTGAATTTACTCGTTATTGGGGAGTCGCTGATGGCGGATCCAATGCGAGTAAGTACAA---GCTT-A-----TAA-TAAT-----------GCATTCCTT------------------------------------------GGAGATT-CACTCACC-TTTGTCGTAGGAGCGTCCGTACGTATTGTACACCCACAAGCTGTACGCAGATGGTCTCGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TTGTCAATCTCTTGGTCATTGGAGAGTCTCTGATGACTGATACTGTGAGGGTGAGTATGG---AGTA-A-----TTC------------------CTTTCCGA--------------------------TTCGAATAATTCGAATGTTGTTT---TTTTTTTTACCAAAAGGAACGCCCTTATGTTCTATACACGCATAAACTTTACGCTGATGGCCTGGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGGAGCGGCCCTTTGTGCTATACACGCATAAACTGTATGCGGATGGCCTGGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGAGCGACCCTATGTCCTATATACGCACAAGTTATATGCAGATGGTCTAGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGAGCGCCCTTATGTGCTATACACACACAACCTGTATGCGGATGGCTTGGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 10:29 AM