ID:

dsi_12208

Coordinate:

2l:9469737-9469834 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.4 -6.1 -6.04 -6.0

Flybase annnotation

exon [2l_9469835_9471055_+]; CDS [2l_9469835_9470654_+]; exon [2l_9469627_9469736_+]; CDS [2l_9469627_9469736_+]; intron [2l_9469737_9469834_+]

No Repeatable elements found

mature
  1. dsi_12208  2l:9469804-9469824 +
  2. node_14749:348-368 -
  3. node_9137:3-23 +
star

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------##################################################
AAGCAGGCGAAGCCACAGGGCTGGATGCAGCTTTCCGGTCACCCAGAGAGGTAAGAATCTTACAAATAACTTACATTTTTTAGAAAACAATTAAATAAACATTTTATTAGTCAAGTTACTAACTGCTACTATTATTCTTATTTTGCAGCATTGTTCCCACATCGACTGGAATAGTGCGCAAACGGATCTCAGGACTGG
**************************************************...................((.....................((((((..((..((.((((..((((...)))))))).))..))..))))))...))**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
SRR553485
Chicharo_3 day-old ovaries
SRR553487
NRT_0-2 hours eggs
SRR902008
ovaries
O001
Testis
M024
male body
M025
embryo
M053
female body
SRR618934
dsim w501 ovaries
SRR553486
Makindu_3 day-old ovaries
SRR553488
RT_0-2 hours eggs
M023
head
..............................................................................................................................................................................TGCGCAAACGGATCTCAGGAC... 21 0 3 6.67 20 18 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................CACATCGACTGGAATAGTGCG.................... 21 0 3 2.33 7 0 4 3 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................TGGAATAGTGCGCAAACGGAT........... 21 0 3 1.67 5 3 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................GCGCAAACGGATCTCAGGACT.. 21 0 3 1.33 4 0 3 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................CTGGAATAGTGCGCAAACGG............. 20 0 3 1.00 3 3 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................CAAACGGATCTCAGGACT.. 18 0 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0 0
..................................................................................................................................................AGCATTGTTCCCACATCGACTG.............................. 22 0 3 0.67 2 0 0 0 0 0 0 2 0 0 0 0 0
.....................................................................................................................ACTAACTGCTACTATTATTCT............................................................ 21 0 3 0.67 2 0 0 0 2 0 0 0 0 0 0 0 0
.........................................................................................................................................................................AATAGTGCGCAAACGGATCTC........ 21 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................GCGCAAACGGATCTCAGGAC... 20 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................TCGACTGGAATAGTGCGCAAAC............... 22 0 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0 0
......................................................................................................................................................TTGTTCCCACATCGACTGGAA........................... 21 0 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................CTGGAATAGTGCGCAAACGGA............ 21 0 3 0.67 2 1 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................TGGAATAGTGCGCAAACGGA............ 20 0 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0 0
....................................................................................................................................................................ACTGGAATAGTGCGCAAACGG............. 21 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0
.............CACAGGGCTGGATGCAGC....................................................................................................................................................................... 18 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
.AGCAGGCGAAGCCACAGGGCTGGA............................................................................................................................................................................. 24 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0
...........GGCACAGGGCTGGATGGGGCTT..................................................................................................................................................................... 22 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................CACATCGACTGGAATAGGGCG.................... 21 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................GCAAACGGATCTCAGGACTG. 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................ATCGACTGGAATAGTGCGCAA................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AAACGGATCTCAGGACTGG 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................ATAGTGCGCAAACGGATCTCA....... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TGCGCAAACGGATCTCAGGACT.. 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCCACGTCGACTGGAATAGTGCGCAA................. 26 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................ATAGTGCGCAAACGGATCTC........ 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TGCGCAAACGGATCTCAG...... 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................TCGACTGGAATAGTGCGCAAACGGA............ 25 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................CGCAAACGGATCTCAGGACTG. 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TGCGCAAACGGATCTCAGGA.... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................TCGACTGGAATAGTGCGCAAA................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................GCAAACGGATCTCAGGACTGG 21 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................CACATCGACTGGAATAGTG...................... 19 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................CCACATCGACTGGAATAGTGC..................... 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................CGCAAACGGATCTCAGGACTGT 22 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TAGTGCGCAAACGGATCTCAGGACTGG 27 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................TCGACTGGAATAGTGCGCAA................. 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................ATAGTGCGCAAACGGATCTCAA...... 22 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TAGTGCGCAAACGGATCTCAGGA.... 23 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................GCGCAAACGGATCTCAGGACTG. 22 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................ATCGACTGGAATAGTGCGCAT................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................ATAGTGCGCAAACGGATCTCAGGACT.. 26 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................TTGTTCCCACATCGACTGGAAA.......................... 22 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................CGCGGACGGATCTCGGGACTG. 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GTCAAGTTACTAAGAGC........................................................................ 17 2 15 0.13 2 0 0 0 0 0 0 0 0 0 0 2 0
.............CACAGGGATGTATGAAGCT...................................................................................................................................................................... 19 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................................GTCAAGTGACTAAGTGC........................................................................ 17 2 19 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................GTCAAGTTACTAAGAG......................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

TTCGTCCGCTTCGGTGTCCCGACCTACGTCGAAAGGCCAGTGGGTCTCTCCATTCTTAGAATGTTTATTGAATGTAAAAAATCTTTTGTTAATTTATTTGTAAAATAATCAGTTCAATGATTGACGATGATAATAAGAATAAAACGTCGTAACAAGGGTGTAGCTGACCTTATCACGCGTTTGCCTAGAGTCCTGACC
**************************************************...................((.....................((((((..((..((.((((..((((...)))))))).))..))..))))))...))**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
SRR902009
testis
SRR618934
dsim w501 ovaries
SRR553487
NRT_0-2 hours eggs
SRR553486
Makindu_3 day-old ovaries
M023
head
O001
Testis
O002
Head
SRR553488
RT_0-2 hours eggs
M024
male body
SRR902008
ovaries
M025
embryo
GSM343915
embryo
..........................................................................................................................................................AGGGTGTAGCTGACCTTATCACGCGT.................. 26 0 3 5.00 15 11 0 0 3 1 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTAACAAGGGTGTAGCTGACCTTAT......................... 26 0 3 3.67 11 9 0 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................ATCACGCGTTTGCCTAGAGTC...... 21 0 3 2.67 8 0 1 0 0 0 3 0 2 0 2 0 0 0
...................................................................................................................................................CGTAACAAGGGTGTAGCTGACCTT........................... 24 0 3 1.67 5 2 0 1 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................AGGGTGTAGCTGACCTTATCACGCGTT................. 27 0 3 1.67 5 4 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TATCACGCGTTTGCCTAGAGT....... 21 0 3 1.67 5 0 2 0 1 0 0 2 0 0 0 0 0 0
................................................................................................................................................................................GCGTTTGCCTAGAGTCCTGAC. 21 0 3 1.33 4 0 4 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTAACAAGGGTGTAGCTGACCT............................ 23 0 3 1.33 4 3 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CACGCGTTTGCCTAGAGTCCT.... 21 0 3 1.00 3 1 1 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................AATCAGTTCAATGATTGACGATGATA.................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TCACGCGTTTGCCTAGAGTCC..... 21 0 3 1.00 3 2 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................................................AACAATGATTGAAGATGATAAT................................................................ 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................................CGTTTGCCTAGAGTCCTG... 18 0 3 0.67 2 0 0 0 0 0 0 2 0 0 0 0 0 0
................................................................................................................................................CGTCGTAACAAGGGTGTAGCTGACCTT........................... 27 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................CTGACCTTATCACGCGTTTGC.............. 21 0 3 0.67 2 0 0 0 0 0 0 2 0 0 0 0 0 0
..........................................................................................................................................................................TATCACGCGTTTGCCTAGAGTC...... 22 0 3 0.67 2 0 0 0 0 0 2 0 0 0 0 0 0 0
............................................................................................................................................................GGTGTAGCTGACCTTATCACGC.................... 22 0 3 0.67 2 0 0 0 0 0 0 0 2 0 0 0 0 0
..............................................................................................................................................................TGTAGCTGACCTTATCACGCGT.................. 22 0 3 0.67 2 0 0 0 0 0 0 2 0 0 0 0 0 0
....................................................................................................................................................GTAACAAGGGTGTAGCTGACCTTAT......................... 25 0 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0 0 0
..................................................................................................................................................................GCTGACCTTATCACGCGTTTGCCT............ 24 0 3 0.67 2 0 0 0 0 0 0 2 0 0 0 0 0 0
..........................................................................................................................................................AGGGTGTAGCTGACCTTATCA....................... 21 0 3 0.67 2 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................ATAAAACGTCGTAACAAGGGTGTAGC.................................. 26 0 3 0.67 2 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................TGACCTTATCACGCGTTTGCCTAGAGT....... 27 0 3 0.67 2 1 0 0 0 1 0 0 0 0 0 0 0 0
..CGTCCGCTTCGGTGTCCCGACCTA............................................................................................................................................................................ 24 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................CGAAAGGCCAGTGGGTCTCTCCAT................................................................................................................................................. 24 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........TGGTGTCCCGACCTACGTC........................................................................................................................................................................ 19 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................GCTGACCTTATCACGCGTTTG............... 21 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................AGGGTGTAGCTGACCTTATCACGCGG.................. 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................GTAACAAGGGTGTAGCTGACCT............................ 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................AGCTGACCTTATCACGCGTTTGCCT............ 25 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................GGGTGTAGCTGACCTTATCACGCGT.................. 25 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................AGGGTGTAGCTGACCTTATCACGCGTTT................ 28 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTAACAAGGGTGTAGCTGACC............................. 22 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................AGAATAAAACGTCGTAACAAGGGTGT..................................... 26 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................AACAAGGGTGTAGCTGACCTTATCACGCGT.................. 30 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................CAAGGGTGTAGCTGACCTTAT......................... 21 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................ATAAAACGTCGTAACAAGGGTGTAGCT................................. 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................ATCACGCGTTTGCCTAGAGTCC..... 22 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................AGGGTGTAGCTGACCTCATCACGCGTT................. 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTATCACGCGTTTGCCTAGAGTCCT.... 25 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CACGCGTTTGCCTAGAGTCCTGAC. 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................AAGGGTGTAGCTGACCTTATCACGCGTT................. 28 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CTTATCACGCGTTTGCCTAGAGT....... 23 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTATCACGCGTTTGCCTAGAGA....... 22 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................TTTGCCTAGAGTCCTG... 16 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTAACAAGGGTGTAGCTGACCTTATCA....................... 28 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TCACGCGTTTGCCTAGAGT....... 19 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTAACAAGGGTGTAGCTGACCTTATCAC...................... 29 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................GTGTAGCTGACCTTATCACGC.................... 21 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................AGCTGACCTTATCACGCGTTTGCCTAG.......... 27 0 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................AGGGTGTAGCTGACCTTATCACGC.................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTATCACGCGTTTGCCTGGA......... 20 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TGACGATGATAATAAGAATAAAACGT................................................... 26 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CGTAACAAGGGTGTAGCTGAC.............................. 21 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TTGCGTTTGCCTAGAGTCCTGAC. 23 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................AGAATAAAACGTCGTA............................................... 16 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................CGTCGTAACAAGGGTGTAGCTGACCT............................ 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................GTTTGCCTAGAGTCCTGAC. 19 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CGCGTTTGCCTAGAGTCCTGA.. 21 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TATCACGCGTTTGCCTAGAGTCTG.... 24 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................AAAACGTCGTAACAAGGGTGTAGCTGAC.............................. 28 0 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................AAGAATAAAACGTCGTAACAAGGGTGT..................................... 27 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTATCACGCGTTTGCCTAGAGTCCTG... 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................ACGCGTTTGCCTAGAGTCCTG... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................CTTCACGCGTTTGCCTAGAGT....... 21 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................GGTGTAGCTGACCTTATCACGCGTT................. 25 0 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................GTAGCTGACCTTATCACGCGTTTGCCT............ 27 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0
............................................................................AAAAATCTTTTGCTTATTTATTTGTCA............................................................................................... 27 3 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................AAAATCTTTTGTTAA.......................................................................................................... 15 0 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................GCTTTCGCCTAGAGTCCTAA.. 20 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................................AAAAAATCTTTTGTTAT.......................................................................................................... 17 1 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................AAAAAAATCAGTTCAAT................................................................................ 17 1 15 0.07 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................GAGTAGCTGACATTATCAA...................... 19 3 17 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:9469687-9469884 + dsi_12208 AAGCAGGCGAAGCCACAGGGCTGGATGCAGCTTTCCGGTCACCCAGAGAGGTAAGAATCTTACAA------------------------------------------------------A--------------------------------------------------------------------TA--ACTTACATTT--TTTA--GA----------AA--------A-CAATTAAATAA----------------------------ACATTTT------------------------------------------------------------ATTAGTCAAGTTACTAACTGC-TACTATTATTCTT-----ATTTTGCAGCATTGTTCCCACATCGACTGGAATAGTGCGCAAACGGATCTCAGGACTGG
droSec2 scaffold_3:5234613-5234810 + AAGCAGCCGAAGCCACAGGGCTGGATGCAGCTTTCCGGTCACCCAGAGAGGTAAGAATCTTACAA------------------------------------------------------A--------------------------------------------------------------------TA--AATTATATTT--TTTA--GA----------AA--------A-CAATTTAATAA----------------------------ACATTTT------------------------------------------------------------ATTAGTCAAATTCCTAACTGC-TACTATTATTCTT-----ATTTTGCAGCATTGTTCCCACATCGACTGGAATAGTGCGCAAACGGATCTCAGGACTGG
dm3 chr2L:9787210-9787401 + AAGCAGGCGAAGCCACAGGGCTGGATGCAGCTATCCGGTCACCCAGAGAGGTAAGGATCTTACCA------------------------------------------------------A--------------------------------------------------------------------TA--ACTTAAATTTTGTTTT--GA----------AA--------A-CA--------A----------------------------ACATTTT------------------------------------------------------------ATTAGTCAATTTACTAACTGC-TACTATTATTCTT-----ATTTTGCAGCATTGTTCCCACATCGACTGGAATAGTGCGCAAACGGATCTCAGGACTGG
droEre2 scaffold_4929:10399201-10399413 + ACGCAGGCGAAGCCACAGGGCTGGATGCAGCTTTCCGGGCACCCAGAAAGGTAAGAATCTTAGAA------------------------------------------------------T--------------------------------------------------------------------GT--ATTTCGAAAT--TTTA--GG----------AA--------A-CA------------ACAATTTTATCACCCCTCAGCATCAGCATTAT------------------------------------------------------------ATTAGTTCAATTACTAACTGC-TCGTATTATTCT------TTTTTCCAGCATTGTTCCCACATCGACTGGAATAGTGCGCAAACGGATCTCAGGACTGG
droYak3 2L:12475724-12475942 + ACGCAGCAGAAGCCACAGGGCTGGATGCAGCTTTCCGGTCACCCAGAGAGGTAAGAATCCTAGAA------------------------------------------------------C--------------------------------------------------------------------AT--ATTTAAATTG--TTTA--GA----------AA--------A-CACTTC-ATAAACAACAATTTTATCAGCCTT------GATCATTGT------------------------------------------------------------ATAAGGTAAATTACTAACTGC-TCCTGTTTTTCTT-----ATATTCCAGCATTGTTCCCACATCAACTGGAATAGTGCGCAAACGGATCTCAGGACTGG
droEug1 scf7180000409554:5140436-5140725 - ACGCAGGCGAAGCCCCAAGGCTGGATGCAGCTTTCCGGTCACCCAGAGAGGTAAGGATCATAATATAATATGGATGGATATAAATGGATTAAACTCCGTTTTATTAAGTTTTAGTAGGAAATGGTGGAAAATCCTTTAGTTAATGGATTAGTTTTATTGTAATTGGCAA-----TTAT---------------AAAA----GTCATTTTACT----------G-CAATGCAAAAATT-------------------------------------------T---TAATGAGTT-C--------------------------------------------------------------CTCTAAAATCT-----TTTCTTTTCATTTCAGCATTGTTCCCACGTCTACCGGAATAGTGCGCAAACGCATCTCGGGATTCG
droBia1 scf7180000302408:3361944-3362235 - ACGCAGGCGAAGCCCAAGGGCTGGATGCAGCTTTCCGGTCACCCAGAAAGGTAGGCATCTTAAGA------------------------------------------------------CATGGGGGTGAATGGTATACAAAAT---------ATATATTTATCGGCACTACAACGGAAATGTTCCGATTTCGCTTACGTTT--TT--------------------------ATCTC-------------------------------------------T---TAAACTGCTCTTTGTGTATTAAATATTTAAATATTGGGGACATTTAAAGTCGTTTTGT---TCAGATTATTAACTGT-AAAC-TTTTTCCC-----TTTTTGCAGCATTGTTCCCACGTCCACCGGAATAGTGCGGAAGAGGATCTCGGGCCTCG
droTak1 scf7180000415880:55312-55393 - ACGCAGACAAAGCCCAAGGGCTGGATGCAGCTGTCCGGTCACCCAGAGAGGTAAGGATCTTAAAA------------------------------------------------------T--------------------------------------------------------------------TA--TCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT-----ATAGTTTA---------------------------------------------------
droEle1 scf7180000491186:2824806-2824887 + TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACCTG-AAATTCTTCTTTT-----GTTTTCCAGCATTGTGCCCACGTCCACTGGCATTGTCCGTAAACGCATCACGGGCTTCG
droRho1 scf7180000778085:136726-136822 - ATTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---CCGA----------------------------------------------------------CTGAGTACTAACTCT-AAATTGTCCTATT-----ATTTTCCAGCATTGTGCCCACGTCCACCGGAATAGTCCGCAAACGCATTTCCGGCTTCG
droFic1 scf7180000454144:192001-192145 + ATTCC---CATTTTGTAGAGCTTGTT-------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------AT--------A-CCATTAAACAA----------------------------ATATGTTACCAAAAAATG-----------------------------------------------------ATTATTTTACTAACTTG-AAATTATTTTCTT-----CTTTTCCAGCATTGTTCCCACATCAACCGGAATAGTGCGCAAACGCATCACAGGTTTCG
droKik1 scf7180000302472:2157325-2157424 + ACGCAGGTCAAGCCCCAGGGCTGGATGCAGCTTTCCGGTCACCCTGAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTGTTCCCACGTCCACGGGAATCGTGCGAAAGCGGATTGCCGGTTTTC
droAna3 scaffold_12943:1227335-1227498 + AATCAGGGCAAGCCCCAGGGCTGGATGCAGCTTTCCGGCCACCCAGAAAGGTAAGCTTTTCTCT----------------------------------------------------------------------------------------------------------------------------------------------------CACACTAAAA----------AGGTT-------------------------------------------G---CAAACGG----------------------------------------------------------GAGTCTAACTTG-AA------------CATTTTCTTACAGTATTGTGCCGACATCCACGGGAATTGTGCGGAAACGCATCGCCGGTGTCG
droBip1 scf7180000396728:1970754-1970917 - AGTCAGGGCAAGCCACAGGGCTGGATGCAGCTTTCCGGTCACCCAGAAAGGTAAGGGTTTCTTA----------------------------------------------------------------------------------------------------------------------------------------------------AGCCACAAAA----------TAGTC-------------------------------------------A---CAA---------------------------------------------------------------------ACTGG-AATCTAACT-TTTACGTTTTCTTGCAGTATTGTGCCGACATCCACGGGTATTGTGCGGAAACGCATCGCTGGTGTCG
dp5 4_group3:383569-383659 - A---------AGCCCCAGGGCTGGATGCAGTTGTCCGGCCATCCAGAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTGTGCCCACGTCGACGGGAATTGTGCGGAAGCGCATCGTGGGCATCG
droPer2 scaffold_1:1859378-1859468 - A---------AGCCCCAGGGCTGGATGCAGTTGTCCGGCCATCCAGAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTGTGCCCACGTCGACGGGAATTGTGCGGAAGCGCATCGTGGGCATCG
droWil2 scf2_1100000004585:8429659-8429830 + ACGCAATCCAAACCAAAAGGTTGGATGCAGTTATCCGGTCATCCCGAAAGGTATGTTT---ACA---------------------------------------------------------------------------------------------------------------------------------------TT-----------------TGAC----------AACTT-------------------------------------------C---TAAACTGAA-TTTATA---------------------------------------------------TATTAAATAG-TATTCCAT---TTTCTTTCTTTTGCAGTATTGTACCCACCTCAACGGGTATAGTGCGAAAACGTATTAAGAGTCTGG
droVir3 scaffold_12963:1825497-1825669 - ACGCAGTCCAAGCCACACGGCTGGATGCAGCTCTCCGGACATCCCGAAAGGTAAGCAGTTCAAA---------------------------------------------------------------------------------------------------------------TA------------------------------------------GAG----------TGCTC-------------------------------------------A---AAAAATC-----------------------------------------------------ATAGTCTAATCAATCGG-TTTTGTCT---TCTCTTCCCACTTTAGCATTGTGCCCACCACAACGGGCATTGTGCGCAAACGCATCGTTGGCATCG
droMoj3 scaffold_6500:28770307-28770479 - --GCAATCCAAACCGCACGGCTGGATGCAGCTCTCCGGTCATCCCGAGAGGTAAGCAACACAAC---------------------------------------------------------------------------------------------------------------TGA---------------AATG----CTCCTCTCATA----------G-------------------------------------------------------------------C-----------------------------------------------------AAAGCCTAACAAATC----TCTGTCTTTCTTTCTTCCCCATTTAGCATCGTGCCTACCTCGTCGGGAATTGTGCGCAAGCGGATCGCTGGCATCG
droGri2 scaffold_15126:6708542-6708711 + ACGCAATCTAAGCCAAACGGCTGGATGCAGCTCTCCGGGCATCCCGAAAGGTGAGCAACTCACAC------------------------------------------------------T--------------------------------------------------------------------CA--AC--------------------------------------GAATA-------------------------------------------T---CAATGTGCA-C----------------------------------------------------CCTTTGCTAATCTG-T-TTTC------TTCTATTGTTTATAGTATTGTGCCAACCACAGCGGGCATTGTGCGTAAGCGCATTGTTGGCATCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAGCAGGCGAAGCCACAGGGCTGGATGCAGCTTTCCGGTCACCCAGAGAGGTAAGAATCTTACAA------------------------------------------------------A--------------------------------------------------------------------TA--ACTTACATTT--TTTA--GA----------AA--------A-CAATTAAATAA----------------------------ACATTTT------------------------------------------------------------ATTAGTCAAGTTACTAACTGC-TACTATTATTCTT-----ATTTTGCAGCATTGTTCCCACATCGACTGGAATAGTGCGCAAACGGATCTCAGGACTGGSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCAAACGGATCTCAGGAC...2136.6720000000100000118000
..............................................................................................................................................................................................................................................................................................................................................................................................................CACATCGACTGGAATAGTGCG....................2132.33700000040300000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGGAATAGTGCGCAAACGGAT...........2131.67500000010100003000
................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAAACGGATCTCAGGACT..2131.33400000031000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAATAGTGCGCAAACGG.............2031.00300000000000003000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACGGATCTCAGGACT..1830.67200002000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................AGCATTGTTCCCACATCGACTG..............................2230.67200200000000000000
................................................................................................................................................................................................................................................................................................................................................................ACTAACTGC-TACTATTATTCT.................................................................2130.67200000000000020000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AATAGTGCGCAAACGGATCTC........2130.67200000000000002000
................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAAACGGATCTCAGGAC...2030.67200000010000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................TCGACTGGAATAGTGCGCAAAC...............2230.67200002000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TTGTTCCCACATCGACTGGAA...........................2130.67200000020000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAATAGTGCGCAAACGGA............2130.67200010000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGGAATAGTGCGCAAACGGA............2030.67200002000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGAATAGTGCGCAAACGG.............2130.67200000000000002000
.............CACAGGGCTGGATGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................1820.50101000000000000000
.AGCAGGCGAAGCCACAGGGCTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................2420.50100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAACGGATCTCAGGACTG.2030.33100000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACTGGAATAGTGCGCAA.................2130.33100000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGGATCTCAGGACTGG1930.33100000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTGCGCAAACGGATCTCA.......2130.33100000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCAAACGGATCTCAGGACT..2230.33100000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTGCGCAAACGGATCTC........2030.33100000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCAAACGGATCTCAG......1830.33100000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................TCGACTGGAATAGTGCGCAAACGGA............2530.33100000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAACGGATCTCAGGACTG.2130.33100000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCAAACGGATCTCAGGA....2030.33100000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................TCGACTGGAATAGTGCGCAAA................2130.33100000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAACGGATCTCAGGACTGG2130.33100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CACATCGACTGGAATAGTG......................1930.33100000000000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................CCACATCGACTGGAATAGTGC.....................2130.33100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAACGGATCTCAGGACTGT2230.33100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGCGCAAACGGATCTCAGGACTGG2730.33100000000100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TCGACTGGAATAGTGCGCAA.................2030.33100000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTGCGCAAACGGATCTCAA......2230.33100000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGCGCAAACGGATCTCAGGA....2330.33100000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAAACGGATCTCAGGACTG.2230.33100000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACTGGAATAGTGCGCAT.................2130.33100000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTGCGCAAACGGATCTCAGGACT..2630.33101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TTGTTCCCACATCGACTGGAAA..........................2230.33100000000100000000
droSec2
AAGCAGCCGAAGCCACAGGGCTGGATGCAGCTTTCCGGTCACCCAGAGAGGTAAGAATCTTACAA------------------------------------------------------A--------------------------------------------------------------------TA--AATTATATTT--TTTA--GA----------AA--------A-CAATTTAATAA----------------------------ACATTTT------------------------------------------------------------ATTAGTCAAATTCCTAACTGC-TACTATTATTCTT-----ATTTTGCAGCATTGTTCCCACATCGACTGGAATAGTGCGCAAACGGATCTCAGGACTGGSizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
....AGCCGAAGCCACAGGGCTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
............................................................................................................................................................................................................................................................................................................................................................................................................CCCACATCGACTGGAATAGTGC.....................2211.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................................ACATCGACTGGAATAGTGCGC...................2111.0011000
............................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGCGCAAACGGATCTCAGT.....2211.0010100
dm3
AAGCAGGCGAAGCCACAGGGCTGGATGCAGCTATCCGGTCACCCAGAGAGGTAAGGATCTTACCA------------------------------------------------------A--------------------------------------------------------------------TA--ACTTAAATTTTGTTTT--GA----------AA--------A-CA--------A----------------------------ACATTTT------------------------------------------------------------ATTAGTCAATTTACTAACTGC-TACTATTATTCTT-----ATTTTGCAGCATTGTTCCCACATCGACTGGAATAGTGCGCAAACGGATCTCAGGACTGGSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................CCACATCGACTGGAATAGTGC.....................21123.00230000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000300000000000000000000001010000000000000000000000000000000000000001000000000000000000000100100220000100000000001000000000000000000000000010000000000000000000110000010002000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ACATCGACTGGAATAGTGCGC...................2119.0090000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000100000000000000000000000000000000000001000000000000000000000000100000000000000000000000000000000000000100000000000000000000110000000100000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CCACATCGACTGGAATAGTGCGCAAAC...............2718.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CACATCGACTGGAATAGTGCG....................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000002000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000020000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAAACGGATCTCAGGACT..2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001101000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAACGGATCTCAGGACTG.2115.0050000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTGCGCAAACGGATCTCA.......2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000100000100000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAACGGATCTCAGGACTGG2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000002000
...........................CAGCTATCCGGTCACCCAGAG.......................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GACTGGAATAGTGCGCAAACG..............2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000101000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TCCCACATCGACTGGAATAGT.......................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TTCCCACATCGACTGGAATAGT.......................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TTGTTCCCACATCGACTGGAAT..........................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ACATCGACTGGAATAGTGCG....................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACTGGAATAGTGCG....................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCAAACGGATCTCAGGACT..2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................CATTGTTCCCACATCGACTGG.............................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GAATAGTGCGCAAACGGATCT.........2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CCACATCGACTGGAATAGTGCGCAA.................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGGAATAGTGCGCAAACGGAT...........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AATAGTGCGCAAACGGATCTC........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................CCCACATCGACTGGAATAGTG......................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GCTATCCGGTCACCCAGAGAG.....................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ATTTTGCAGCATTGTTCCCAC......................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTCCCACATCGACTGG.............................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCGCAAACGGATCTCAGG.....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TCCGGTCACCCAGAGAG.....................................................................................................................................................................................................................................................................................................................................................................................................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGGATGCAGCTATCCGGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATGCAGCTATCCGGTCACCC...........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAATAGTGCGCAAACGGATCT.........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AGCCACAGGGCTGGATGCAGCTAT.....................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAACGGATCTCAGGAC...1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGCGCAAACGGATCTCAGT.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TT-----ATTTTGCAGCATTGTTT..........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAATAGTGCGCAAACGGA............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCAAACGGATCTCAGGA....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GTTCCCACATCGACTGGAAT..........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GTTCCCACATCGACTGGAATC.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACTGGAATAGTGCGCAAACGGA............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TTTTGCAGCATTGTTCCCACA.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGGAATAGTGCGCAAACGGA............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................CTATTATTCTT-----ATTTTGCAGC.................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCATTGTTCCCACAT....................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AGCAGGCGAAGCCACAGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ACATCGACTGGAATAGTGCGCTGT................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CACAGGGCTGGATGCAGCTATC....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GTTCCCACATCGACTGGAATA.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGCGCAAACGGATCTCAGG.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TTCCCACATCGACTGGAATAG........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CACATCGACTGGAATAGTGC.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CCACATCGACTGGAATAGTCA.....................2111.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CCACAGGGCTGGATGCAGCTATC....................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TCGACTGGAATAGTGCGCAAAC...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GTTCCCACATCGACTGGAATAGTGCGC...................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGGAATAGTGCGCAAACGGATT..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GGCTGGATGCAGCTATCCGGT................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
.........AAGCCACAGGGCTGGATGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................CATCGACTGGAATAGTGCGCA..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CCACATCGACTGGAATAGTT......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TTCCCACATCGACTGGAATAGTGCGCA..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................CCCACATCGACTGGAATAGTGCGCA..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGCGCAAACGGATCTCAGGAC...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TTGTTCCCACATCGACTGGAT...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................ATTCTT-----ATTTTGCAGCATTGT............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
................................ATCCGGTCACCCAGAGAG.....................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ACATCGACTGGAATAGTGCGCATC................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TTGTTCCCACATCGACTGGAAA..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCAAACGGATCTCAGGAC...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAACGGATCTCAGGACTGG2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CTATCCGGTCACCCAGAGAGG....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................GATGCAGCTATCCGGTCACC............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................T-----ATTTTGCAGCATTGTTCCCA.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAACGGATCTCAGGAC...1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGGAATAGTGCGCAAACGG.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACTGGAATAGTGCGCAAA................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............ACAGGGCTGGATGCAGCTAT.....................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGAATAGTGCGCAAA................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AGCAGGCGAAGCCACAGGGCTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACTGGAATAGTGCGCAA.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGAATAGTGCGCAAACGG.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........AAGCCACAGGGCTGGATGCAGCTATCCGG.................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......CGAAGCCACAGGGCTGGATGC...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CCACATCGACTGGAATAGTGCGCAAA................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CACATCGACTGGAATAGTGCGATC.................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CCGGTCACCCAGAGAGCAT..................................................................................................................................................................................................................................................................................................................................................................................................19140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ACGCAGGCGAAGCCACAGGGCTGGATGCAGCTTTCCGGGCACCCAGAAAGGTAAGAATCTTAGAA------------------------------------------------------T--------------------------------------------------------------------GT--ATTTCGAAAT--TTTA--GG----------AA--------A-CA------------ACAATTTTATCACCCCTCAGCATCAGCATTAT------------------------------------------------------------ATTAGTTCAATTACTAACTGC-TCGTATTATTCT------TTTTTCCAGCATTGTTCCCACATCGACTGGAATAGTGCGCAAACGGATCTCAGGACTGGSizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................TTACTAACTGC-TCGTATTATTCT------...........................................................2311.0011000000
...................................................................................................................................................................................................................................................................................................................................................................AACTGC-TCGTATTATTCT------TTTTTCCAG..................................................2711.0010000010
droYak3
ACGCAGCAGAAGCCACAGGGCTGGATGCAGCTTTCCGGTCACCCAGAGAGGTAAGAATCCTAGAA------------------------------------------------------C--------------------------------------------------------------------AT--ATTTAAATTG--TTTA--GA----------AA--------A-CACTTC-ATAAACAACAATTTTATCAGCCTT------GATCATTGT------------------------------------------------------------ATAAGGTAAATTACTAACTGC-TCCTGTTTTTCTT-----ATATTCCAGCATTGTTCCCACATCAACTGGAATAGTGCGCAAACGGATCTCAGGACTGGSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTGCGCAAACGGATCTCAGG.....2311.00100000010000
.............CACAGGGCTGGATGCAGCTTTCCGGT................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000
droEug1
ACGCAGGCGAAGCCCCAAGGCTGGATGCAGCTTTCCGGTCACCCAGAGAGGTAAGGATCATAATATAATATGGATGGATATAAATGGATTAAACTCCGTTTTATTAAGTTTTAGTAGGAAATGGTGGAAAATCCTTTAGTTAATGGATTAGTTTTATTGTAATTGGCAA-----TTAT---------------AAAA----GTCATTTTACT----------G-CAATGCAAAAATT-------------------------------------------T---TAATGAGTT-C--------------------------------------------------------------CTCTAAAATCT-----TTTCTTTTCATTTCAGCATTGTTCCCACGTCTACCGGAATAGTGCGCAAACGCATCTCGGGATTCGSizeHit CountTotal NormTotal
No Reads
droBia1
ACGCAGGCGAAGCCCAAGGGCTGGATGCAGCTTTCCGGTCACCCAGAAAGGTAGGCATCTTAAGA------------------------------------------------------CATGGGGGTGAATGGTATACAAAAT---------ATATATTTATCGGCACTACAACGGAAATGTTCCGATTTCGCTTACGTTT--TT--------------------------ATCTC-------------------------------------------T---TAAACTGCTCTTTGTGTATTAAATATTTAAATATTGGGGACATTTAAAGTCGTTTTGT---TCAGATTATTAACTGT-AAAC-TTTTTCCC-----TTTTTGCAGCATTGTTCCCACGTCCACCGGAATAGTGCGGAAGAGGATCTCGGGCCTCGSizeHit CountTotal NormTotal
No Reads
droTak1
ACGCAGACAAAGCCCAAGGGCTGGATGCAGCTGTCCGGTCACCCAGAGAGGTAAGGATCTTAAAA------------------------------------------------------T--------------------------------------------------------------------TA--TCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT-----ATAGTTTA---------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACCTG-AAATTCTTCTTTT-----GTTTTCCAGCATTGTGCCCACGTCCACTGGCATTGTCCGTAAACGCATCACGGGCTTCGSizeHit CountTotal NormTotal
No Reads
droRho1
ATTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---CCGA----------------------------------------------------------CTGAGTACTAACTCT-AAATTGTCCTATT-----ATTTTCCAGCATTGTGCCCACGTCCACCGGAATAGTCCGCAAACGCATTTCCGGCTTCGSizeHit CountTotal NormTotal
No Reads
droFic1
ATTCC---CATTTTGTAGAGCTTGTT-------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------AT--------A-CCATTAAACAA----------------------------ATATGTTACCAAAAAATG-----------------------------------------------------ATTATTTTACTAACTTG-AAATTATTTTCTT-----CTTTTCCAGCATTGTTCCCACATCAACCGGAATAGTGCGCAAACGCATCACAGGTTTCGSizeHit CountTotal NormTotal
No Reads
droKik1
ACGCAGGTCAAGCCCCAGGGCTGGATGCAGCTTTCCGGTCACCCTGAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTGTTCCCACGTCCACGGGAATCGTGCGAAAGCGGATTGCCGGTTTTCSizeHit CountTotal NormTotal
No Reads
droAna3
AATCAGGGCAAGCCCCAGGGCTGGATGCAGCTTTCCGGCCACCCAGAAAGGTAAGCTTTTCTCT----------------------------------------------------------------------------------------------------------------------------------------------------CACACTAAAA----------AGGTT-------------------------------------------G---CAAACGG----------------------------------------------------------GAGTCTAACTTG-AA------------CATTTTCTTACAGTATTGTGCCGACATCCACGGGAATTGTGCGGAAACGCATCGCCGGTGTCGSizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
..........AGCCCCAGGGCTGGATGCAGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.......GCAAGCCCCAGGGCTGGATGCAGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AATTGTGCGGAAACGCATCGCCGGTGT..2711.001001000
droBip1
AGTCAGGGCAAGCCACAGGGCTGGATGCAGCTTTCCGGTCACCCAGAAAGGTAAGGGTTTCTTA----------------------------------------------------------------------------------------------------------------------------------------------------AGCCACAAAA----------TAGTC-------------------------------------------A---CAA---------------------------------------------------------------------ACTGG-AATCTAACT-TTTACGTTTTCTTGCAGTATTGTGCCGACATCCACGGGTATTGTGCGGAAACGCATCGCTGGTGTCGSizeHit CountTotal NormTotal
No Reads
dp5
A---------AGCCCCAGGGCTGGATGCAGTTGTCCGGCCATCCAGAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTGTGCCCACGTCGACGGGAATTGTGCGGAAGCGCATCGTGGGCATCGSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................................GAATTGTGCGGAAGCGCATCGTGGGC....2612.0020010100000
..............................................................................................................................................................................................................................................................................................................................................................................................................CACGTCGACGGGAATTGTGCGGA..................2312.0020010100000
......................................................................................................................................................................................................................................................................................................................................................................................................................CGGGAATTGTGCGGAAGCGCATCGTGGGC....2911.0010010000000
............CCCCAGGGCTGGATGCAGTTGTC....................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAGCGCATCGTGGGCATCG2111.0010100000000
..............................TTGTCCGGCCATCCAGAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC.................................................2111.0010000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................CATTGTGCCCACGTCGACGGG.............................2111.0010100000000
droPer2
A---------AGCCCCAGGGCTGGATGCAGTTGTCCGGCCATCCAGAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTGTGCCCACGTCGACGGGAATTGTGCGGAAGCGCATCGTGGGCATCGSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................GCATTGTGCCCACGTCGACGGGA............................2311.001010000
droWil2
ACGCAATCCAAACCAAAAGGTTGGATGCAGTTATCCGGTCATCCCGAAAGGTATGTTT---ACA---------------------------------------------------------------------------------------------------------------------------------------TT-----------------TGAC----------AACTT-------------------------------------------C---TAAACTGAA-TTTATA---------------------------------------------------TATTAAATAG-TATTCCAT---TTTCTTTCTTTTGCAGTATTGTACCCACCTCAACGGGTATAGTGCGAAAACGTATTAAGAGTCTGGSizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTGCGAAAACGTATT..........1811.00100010
....................................................................................................................................................................................................................................................................................................................................................................AATAG-TATTCCAT---TTTCTTTCTTTTGCA...................................................2811.00100010
droVir3
ACGCAGTCCAAGCCACACGGCTGGATGCAGCTCTCCGGACATCCCGAAAGGTAAGCAGTTCAAA---------------------------------------------------------------------------------------------------------------TA------------------------------------------GAG----------TGCTC-------------------------------------------A---AAAAATC-----------------------------------------------------ATAGTCTAATCAATCGG-TTTTGTCT---TCTCTTCCCACTTTAGCATTGTGCCCACCACAACGGGCATTGTGCGCAAACGCATCGTTGGCATCGSizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
.CGCAGTCCAAGCCACACGGCTG................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
............CCACACGGCTGGATGCAGCTCTCC...................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CCACCACAACGGGCATTGTGCGCA..................2411.001001000000000000000000000000000000000000000000000000000000000000
.........AAGCCACACGGCTGGATGCAGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
droMoj3
--GCAATCCAAACCGCACGGCTGGATGCAGCTCTCCGGTCATCCCGAGAGGTAAGCAACACAAC---------------------------------------------------------------------------------------------------------------TGA---------------AATG----CTCCTCTCATA----------G-------------------------------------------------------------------C-----------------------------------------------------AAAGCCTAACAAATC----TCTGTCTTTCTTTCTTCCCCATTTAGCATCGTGCCTACCTCGTCGGGAATTGTGCGCAAGCGGATCGCTGGCATCGSizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................GTGCCTACCTCGTCGGGA............................1811.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................CATCGTGCCTACCTCGTCGGGAAT..........................2411.001100000
..........................GCAGCTCTCCGGTCATCCCGA........................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
ACGCAATCTAAGCCAAACGGCTGGATGCAGCTCTCCGGGCATCCCGAAAGGTGAGCAACTCACAC------------------------------------------------------T--------------------------------------------------------------------CA--AC--------------------------------------GAATA-------------------------------------------T---CAATGTGCA-C----------------------------------------------------CCTTTGCTAATCTG-T-TTTC------TTCTATTGTTTATAGTATTGTGCCAACCACAGCGGGCATTGTGCGTAAGCGCATTGTTGGCATCGSizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
No Reads

Generated: 05/18/2015 at 09:35 AM