dsi_12184

ATTAAATGTGTACATATTATCTGAGTAGTTTTGTCTGGGGTACAAAGTATAGCTTTTCGTTTCAAATTCTTTATAGATGTTTAATTCAGACTAAGAGTAAGTTAGCTCTACTTAACTGCTTTAGTACTAAATTCACACTCGCATATTAATATTAAACATATTAATCATAAACACTTGCCTTTAATTAAACTTTTCTACAGATTAAGCACCTTGAACTTGGTGGAGCTCATGGCTGTGGACCATGAGAACA ************************************************.......................((((.((((((((.((((((.(((((.(((((......)))))))))))))).))................((((((((.....))))))))((........)).....))))))))...))))...************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553487 NRT_0-2 hours eggs	SRR902009 testis	GSM343915 embryo	SRR553486 Makindu_3 day-old ovaries	M025 embryo
...................................................................................................................................................................................................................TGAACTTGGTGGAGCTCATGGCTGT..............	25	0	1	1.00	1	0	1	0	0	0
.................................................................................................................................................................................................................................TTCATGGCTGTGGACCAGGA.....	20	2	1	1.00	1	1	0	0	0	0
..TAAATGTGGACATATTAT......................................................................................................................................................................................................................................	18	1	3	0.33	1	0	0	1	0	0
........................................................................................................................................................................................................................TTGGTAGAGCTCAAGGC.................	17	2	11	0.18	2	2	0	0	0	0
..........................AGTTCCGTCTGGGGTACCA.............................................................................................................................................................................................................	19	3	9	0.11	1	1	0	0	0	0
.....................................................................................TCAGACGAAGAGTAA......................................................................................................................................................	15	1	17	0.06	1	0	0	0	1	0
................................GCATGGGGTACCAAGTAT........................................................................................................................................................................................................	18	3	20	0.05	1	0	0	0	0	1
...........................................................................................................................................................................................................................GGGGAGCCCATGGTTGTGG............	19	3	20	0.05	1	1	0	0	0	0

TAATTTACACATGTATAATAGACTCATCAAAACAGACCCCATGTTTCATATCGAAAAGCAAAGTTTAAGAAATATCTACAAATTAAGTCTGATTCTCATTCAATCGAGATGAATTGACGAAATCATGATTTAAGTGTGAGCGTATAATTATAATTTGTATAATTAGTATTTGTGAACGGAAATTAATTTGAAAAGATGTCTAATTCGTGGAACTTGAACCACCTCGAGTACCGACACCTGGTACTCTTGT ************************************************.......................((((.((((((((.((((((.(((((.(((((......)))))))))))))).))................((((((((.....))))))))((........)).....))))))))...))))...************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553487 NRT_0-2 hours eggs	SRR553485 Chicharo_3 day-old ovaries	SRR553488 RT_0-2 hours eggs	SRR553486 Makindu_3 day-old ovaries
..........................................................................................................................................AGCGTATAATTATAATTTGTAT..........................................................................................	22	0	1	1.00	1	0	1	0	0
..............................................................................................................................................................................AATGGAAATAATTTTGAAAAGAT.....................................................	23	3	1	1.00	1	1	0	0	0
...............................................................................................TCATTCAATGATGATGAATTG......................................................................................................................................	21	3	8	0.38	3	3	0	0	0
...............................................................................AAATGATGTCTGATTCTGATT......................................................................................................................................................	21	3	5	0.20	1	0	0	1	0
................................................................................................................................................................................CGGATATTAAATTGAAA.........................................................	17	2	20	0.10	2	2	0	0	0
................................................................................................................................................................................GGGAAATTATTTTGAAAA........................................................	18	2	20	0.05	1	0	0	0	1
...........................................................................................................................................................................................TTGAAGAGATGTCTAATGT............................................	19	3	20	0.05	1	1	0	0	0

Species	Coordinate	ID	Alignment
droSim2	2l:11673063-11673312 +	dsi_12184	ATTAA--------ATGTG---TACATATTATCTGAGTAGTT----TTGTCTGGGGTACAAAGTATA-GC-TTTTCGTTTCAAATTCTTTATAGATGTTTAATT------------------------------------------------------------------------------------------CAGACTAAGAGTAAGTT-------------AGCTCTAC--------T-TAACTGCTTTAGTACTAAATTCACACTC----------------------------------------------------------GCATATTAAT--ATTA---AACATATTAAT---------C-----------------------ATAAACACTTGCCTTTAATTAAACTTTTCT-------------------------------ACAGATTAAGCACCTTGAACTTGGTGGAGCTCATGGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGACCATGA-------GAACA
droSec2	scaffold_16:200729-200979 +		ATTAA--------ATGTG---TACATTTTATCTGAGTAGTT----TTGTCTGGGGTACAAAGTATT-GC-TTTTCGTTTCAAATTCGTTATGGATGTTTAATT------------------------------------------------------------------------------------------CAGACTAAGAGTAAGTT-------------AGCTCTAC--------T-TAACTGCTTTAGTACTAAATTCACACTC----------------------------------------------------------GCATATTAAT--ATTA---AACATATTAAG---------C-----------------------ATAAACACTTGCCTTTAATTAAACTTTTCT-------------------------------ACAGATTAAGCACCTTTAACTTGGTGGAGCTCATGGCT------------------------------------------------------------------------------------------------G-----------------------------------------------------------------GGGGACCATGA-------GAACA
dm3	chr2L:12005157-12005431 +		ATTAA--------ATGTG---TAC--------TGAGTAGTT----TTCTCTGGGGTACAAAGTATTTGT-TTTTCGTTTTAAATTCTTTATGGATGTTTAATT------------------------------------------------------------------------------------------CAGACTAAGAGTAAGTT-------------AGCTCTAC--------T-TACCTGTTTTAGTACTGAATTCCCACTCACCTGTCTAGTTTCATGTTC--------------------------------------GTATATTCAT--ATTAATAAATATATTCATATTCATTAAC-----------------------ATGAATAGTTGACTTTAATTACACTTTCCC-------------------------------ACAGATTAAGCACTTTGAACTTGGTGGAGCTCATGGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGGCCATGA-------GAACA
droEre2	scaffold_4929:13408870-13409177 -		ATTAGCGCGATGAATGTG---TACATTTTATACGAGTGGT-------------GCTACAAAGTATT-G-----------------------GGGTGTTCAATT----------A-AAATAAACT------------------------------------------------------------------------------AATTCATTATTAA-TTTCAGCTGCTCTTATTATAGTAT-TAACTGTTTTAGTACCAATTTCACATTCATCTGCCTGTTTTAACGTTTTAAAACAACAGTTTCTAAAATATAACAATTTAAC------------AA--AGTG---CAGC-----------------GGAACATTGCTCTCAGTTTACCCATACATAGACTTGTGTAATTAA-CATTTTT-------------------------------CCAAGTTTAATACCTTGAACTTGATGGAGCTCATGGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGGCCATGA-------GAACA
droYak3	2L:8424112-8424393 +		ATTAGCGCGATAGAAGTG---TACATTTTATACGAGTAGTT----CAGTCTGCGGTACAAAGTATT-GC-GTTTTGTTTAAAATGGTTACTGTTTGTTTTATGTACTTACATTACTAACTAACT------------------------------------------------------------------------------AATAAGTTAATATTTTTAAGCAGCTCCAGTTAT---AT-TAACTGCTGGTATACTAATTTCA------CCTGTCT---------------------------------------------------GTTTCCCAG--AGTG---AACC---------------------------CATAAATTCACCCATAAATAGTGTTTTTTAATTACAC-----T-------------------------------ACAAGTTTAGTACCTTGAACTTGATGGA-------GCT------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGGCCATGA-------GAACA
droEug1	scf7180000409122:393256-393598 +		ATTAAATTGACG--TGCC---ATAGTTTTATAAGTTTAGTTTATTTATTTAGTTTT----------------TTTGATTAAAATTGT-AC-----------------TATAAATATAGATTTACTATTATAGTAACTTTAAAAAGATACAACATATATACTAATTATATTTCG-TTATATATATGTAGTATATTAAACTAAATGTGTGAA-------------AAATATGT--------TAGAAGTGTTTTAATAA--GATTTACACCC----------------------------------------------------------AAAAATAAATGGATTT---TAAGTTTCAAT---------T-----------------------TTA-AAATTCCAATTGAATAATATTTTCTTAAAAATCAAACATAAATAACTCTTGTGACCTCCATC----TTGCCTTGAACTTGGA-CAGCTAGCGGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGAGCCATGA-------GAACA
droBia1	scf7180000302422:1014592-1014632 -		C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTTGACCTTTGC-CAGC-CACTACT------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGGCCATGA-------A-AGA
droTak1	scf7180000415863:241367-241410 -		A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTGAACTTCACCAGCTTCATGGAC------------------------------------------------------------------------------------------------T-----------------------------------------------------------------GTGAGCCTTGA-------GAACA
droEle1	scf7180000491028:3164972-3165152 -		ATTAA--------GCGTCCAGTTG--------TGAGTATTT----TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGGAGGCGATGTGGGTTTGTCTGTAACCACAAGTTTTTATGTTAACGCTGCATTAATAGTTTTTGTTTAATTACTTTATTTTAAATTAATGTTTTTTTTTTAATTTAAAATTAAACAATTATTTGTTTTATTAAGT---------------------------TTAAAACATTT-------TTACA
droRho1	scf7180000761302:139303-139344 -		A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTGAACTTCAC-CAGCTCATGGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTAGCCATGA-------GAACA
droFic1	scf7180000453936:171749-171891 -		TAAAA--------TTA-----TATGATTTATATGAATGGTTCATCTTTTCTGTTGATTAAAGTGCA-ATTACTTAGTTGTTAAATTTTTAATTTTATCTAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATATGT------------------------------------------------------------------------------------------------ATTTACTTTATA------AAATATTTTGATT-TGCAGAT---------------------------ATTAAACATGT-------AA-AT
droKik1	scf7180000302679:697059-697109 +		C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTTGAACTTCGCCAGCTTCATGGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGACCCACCATATGAACGGATA
droAna3	scaffold_12916:9467109-9467291 -		ATTTA--------ATAGG---GAA--------TAAG---------------------------------------------------------------------TTTTAATTTTAAGAAAATGAGAGTTAATACAAAAGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTGAAATATTAGATAAGTAATTAGTAAATAATCTGTATAATATTATTTATTATTTTGTATTTATTTTAAACCT-----------TAAAATATTAAACCCAATGTACTCTCCATGCCCTTCAGCTACCTTCCATC-------------
dp5	4_group2:954224-954462 -		ACACG--------GTGTG---AAAA---TGAATGAATAGAATATT------------------AAA-----------------------------------TCTGTCTCAATTTGTAGCTAACCAATGAGAATGCATATGTACATATGGACCCCATCTATTTATTCTCTTTGGGTCATTTACTTCTCACAAATTAAACGAAGTGTCTGAC-------------AGGATTAT--------C-GAGCTGGTGTAAAATGTAATTTA------A---------------------------------------------------CAGGCGGCTTTATCC--GGAA---AACA---------------------------TTTAAGATTTCCTATAAACGGG-------------------------------------------------------------------------------------GGGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGC---GGA-------TGATA
droPer2	scaffold_8:2941607-2941833 +		AATGA--------ATGAA---TAGA---------------ATACT------------------AAA-----------------------------------TCTGTCTCAATTTGTAGCTAACCAATGAGAATGCATATGTACATATGGACCCCATCTATTTATTCTCTTTGGGTCATTTACTTCTCACAATTTAAACGAAGTGTCTGAC-------------AGGATTAT--------C-GAGCTGGTGTAAAATGTAATTTA------A---------------------------------------------------CAGGCGGCTTTATCC--GGAA---AACA---------------------------TTTAAGATTTCCTATAAACAGG-------------------------------------------------------------------------------------GGGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGC---GGA-------TGATA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

ATTAA--------ATGTG---TACATATTATCTGAGTAGTT----TTGTCTGGGGTACAAAGTATA-GC-TTTTCGTTTCAAATTCTTTATAGATGTTTAATT------------------------------------------------------------------------------------------CAGACTAAGAGTAAGTT-------------AGCTCTAC--------T-TAACTGCTTTAGTACTAAATTCACACTC----------------------------------------------------------GCATATTAAT--ATTA---AACATATTAAT---------C-----------------------ATAAACACTTGCCTTTAATTAAACTTTTCT-------------------------------ACAGATTAAGCACCTTGAACTTGGTGGAGCTCATGGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGACCATGA-------GAACA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACTTGGTGGAGCTCATGGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------GT.....................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0

droSec2

ATTAA--------ATGTG---TACATTTTATCTGAGTAGTT----TTGTCTGGGGTACAAAGTATT-GC-TTTTCGTTTCAAATTCGTTATGGATGTTTAATT------------------------------------------------------------------------------------------CAGACTAAGAGTAAGTT-------------AGCTCTAC--------T-TAACTGCTTTAGTACTAAATTCACACTC----------------------------------------------------------GCATATTAAT--ATTA---AACATATTAAG---------C-----------------------ATAAACACTTGCCTTTAATTAAACTTTTCT-------------------------------ACAGATTAAGCACCTTTAACTTGGTGGAGCTCATGGCT------------------------------------------------------------------------------------------------G-----------------------------------------------------------------GGGGACCATGA-------GAACA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
No Reads

dm3

ATTAA--------ATGTG---TAC--------TGAGTAGTT----TTCTCTGGGGTACAAAGTATTTGT-TTTTCGTTTTAAATTCTTTATGGATGTTTAATT------------------------------------------------------------------------------------------CAGACTAAGAGTAAGTT-------------AGCTCTAC--------T-TACCTGTTTTAGTACTGAATTCCCACTCACCTGTCTAGTTTCATGTTC--------------------------------------GTATATTCAT--ATTAATAAATATATTCATATTCATTAAC-----------------------ATGAATAGTTGACTTTAATTACACTTTCCC-------------------------------ACAGATTAAGCACTTTGAACTTGGTGGAGCTCATGGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGGCCATGA-------GAACA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
................................................................................................TTTAATT------------------------------------------------------------------------------------------CAGACTAAGAGTAAGTT-------------AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................AC--------T-TACCTGTTTTAGTACTGAATTCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................TAC--------TGAGTAGTT----TTCTCTGGGGTACAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................CTCTGGGGTACAAAGTATTTGT-TTTTCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............TGTG---TAC--------TGAGTAGTT----TTCTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTGGTGGAGCTCATGG...........................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGTGGAGCTCATGGC..........................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................CCACTCACCTGTCTAGTTTCATGTTC--------------------------------------G..........................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACTTGGTGGAGCTCATGG...........................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAACTTGGTGGAGCTCATGGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------G......................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

ATTAGCGCGATGAATGTG---TACATTTTATACGAGTGGT-------------GCTACAAAGTATT-G-----------------------GGGTGTTCAATT----------A-AAATAAACT------------------------------------------------------------------------------AATTCATTATTAA-TTTCAGCTGCTCTTATTATAGTAT-TAACTGTTTTAGTACCAATTTCACATTCATCTGCCTGTTTTAACGTTTTAAAACAACAGTTTCTAAAATATAACAATTTAAC------------AA--AGTG---CAGC-----------------GGAACATTGCTCTCAGTTTACCCATACATAGACTTGTGTAATTAA-CATTTTT-------------------------------CCAAGTTTAATACCTTGAACTTGATGGAGCTCATGGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGGCCATGA-------GAACA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................GTTTACCCATACATAGACTTGTGT............................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0

droYak3

ATTAGCGCGATAGAAGTG---TACATTTTATACGAGTAGTT----CAGTCTGCGGTACAAAGTATT-GC-GTTTTGTTTAAAATGGTTACTGTTTGTTTTATGTACTTACATTACTAACTAACT------------------------------------------------------------------------------AATAAGTTAATATTTTTAAGCAGCTCCAGTTAT---AT-TAACTGCTGGTATACTAATTTCA------CCTGTCT---------------------------------------------------GTTTCCCAG--AGTG---AACC---------------------------CATAAATTCACCCATAAATAGTGTTTTTTAATTACAC-----T-------------------------------ACAAGTTTAGTACCTTGAACTTGATGGA-------GCT------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGGCCATGA-------GAACA

Size

Hit Count

Total Norm

Total

M026
Head

M043
Female-body

M056
Embryo

V046
Embryo

V052
Head

V058
Head

V120
Male-body

SRR1275488
Male larvae

SRR1275486
Male prepupae

SRR1275484
Male prepupae

GSM1528802
follicle cells

No Reads

droEug1

ATTAAATTGACG--TGCC---ATAGTTTTATAAGTTTAGTTTATTTATTTAGTTTT----------------TTTGATTAAAATTGT-AC-----------------TATAAATATAGATTTACTATTATAGTAACTTTAAAAAGATACAACATATATACTAATTATATTTCG-TTATATATATGTAGTATATTAAACTAAATGTGTGAA-------------AAATATGT--------TAGAAGTGTTTTAATAA--GATTTACACCC----------------------------------------------------------AAAAATAAATGGATTT---TAAGTTTCAAT---------T-----------------------TTA-AAATTCCAATTGAATAATATTTTCTTAAAAATCAAACATAAATAACTCTTGTGACCTCCATC----TTGCCTTGAACTTGGA-CAGCTAGCGGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGAGCCATGA-------GAACA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTTGACCTTTGC-CAGC-CACTACT------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGGCCATGA-------A-AGA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTGAACTTCACCAGCTTCATGGAC------------------------------------------------------------------------------------------------T-----------------------------------------------------------------GTGAGCCTTGA-------GAACA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

ATTAA--------GCGTCCAGTTG--------TGAGTATTT----TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGGAGGCGATGTGGGTTTGTCTGTAACCACAAGTTTTTATGTTAACGCTGCATTAATAGTTTTTGTTTAATTACTTTATTTTAAATTAATGTTTTTTTTTTAATTTAAAATTAAACAATTATTTGTTTTATTAAGT---------------------------TTAAAACATTT-------TTACA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTGAACTTCAC-CAGCTCATGGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTAGCCATGA-------GAACA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TAAAA--------TTA-----TATGATTTATATGAATGGTTCATCTTTTCTGTTGATTAAAGTGCA-ATTACTTAGTTGTTAAATTTTTAATTTTATCTAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATATGT------------------------------------------------------------------------------------------------ATTTACTTTATA------AAATATTTTGATT-TGCAGAT---------------------------ATTAAACATGT-------AA-AT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTTGAACTTCGCCAGCTTCATGGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGACCCACCATATGAACGGATA	Size	Hit Count	Total Norm	Total
No Reads

droAna3

ATTTA--------ATAGG---GAA--------TAAG---------------------------------------------------------------------TTTTAATTTTAAGAAAATGAGAGTTAATACAAAAGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTGAAATATTAGATAAGTAATTAGTAAATAATCTGTATAATATTATTTATTATTTTGTATTTATTTTAAACCT-----------TAAAATATTAAACCCAATGTACTCTCCATGCCCTTCAGCTACCTTCCATC-------------	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAATGTACTCTCCATGCCCTTCAGC........................	27	1	310.00	310	259	51	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAATGTACTCTCCATGCCCTTCAG.........................	26	1	47.00	47	47	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAATGTACTCTCCATGCCCTTCA..........................	25	1	43.00	43	36	7	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAATGTACTCTCCATGCCCTTC...........................	24	1	34.00	34	15	19	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAATGTACTCTCCATGCCCTT............................	23	1	26.00	26	20	6	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATGTACTCTCCATGCCCTTCAGC........................	26	1	23.00	23	22	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAATGTACTCTCCATGCCCT.............................	22	1	17.00	17	11	6	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATGTACTCTCCATGCCCTTCAG.........................	25	1	8.00	8	8	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAATGTACTCTCCATGCCC..............................	21	1	6.00	6	1	5	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATGTACTCTCCATGCCCTTCA..........................	24	1	6.00	6	6	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAATGTACTCTCCATGCCCTTCAGCT.......................	28	1	4.00	4	3	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCAATGTACTCTCCATGCCCTTCAGC........................	28	1	4.00	4	3	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCCAATGTACTCTCCATGCCC..............................	24	1	4.00	4	1	3	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAATGTACTCTCCATGCCCTTCAGCTA......................	29	1	3.00	3	3	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCAATGTACTCTCCATGCCCTTCAG.........................	27	1	3.00	3	3	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCAATGTACTCTCCATGCCCTT............................	24	1	3.00	3	2	1	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACTCTCCATGCCCTTCAGCTACC....................	26	1	3.00	3	2	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAATGTACTCTCCATGCC...............................	20	1	2.00	2	1	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATGTACTCTCCATGCCCTT............................	22	1	2.00	2	2	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTACTCTCCATGCCCTTCAGC........................	23	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCAATGTACTCTCCATGCCCT.............................	23	1	2.00	2	0	2	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAATGTACTCTCCATGCCCC.............................	22	1	2.00	2	0	2	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGTACTCTCCATGCCCTTCAGC........................	25	1	2.00	2	1	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCAATGTACTCTCCATGCCCTTCA..........................	26	1	2.00	2	1	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAATGTACTCTCCATGCCCTTCAA.........................	26	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAATGTACTCTCCATGCCCTTA...........................	24	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAATGTACTCTCCATGCCCTTCAGT........................	27	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATGTACTCTCCATGCCCTTCAGCA.......................	27	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAATGTACTCTCCATGCCCA.............................	22	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................TGAGAGTTAATACAAAAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATGTACTCTCCATGCCCTTG...........................	23	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACTCTCCATGCCCTTCAGCTACCT...................	27	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATGTACTCTCCATGCCCTTCAGT........................	26	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACTCTCCATGCCCTTCAG.........................	21	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................AGTTAATACAAAAGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTGA...............................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACCCAATGTACTCTCCATGCCC..............................	25	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCCAATGTACTCTCCATGCCC..............................	23	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................ATGAGAGTTAATACAAAAGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT.....................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAATGTACTCTCCATGCCCTC............................	23	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAATGTACTCTCCATGCCCTTCG..........................	25	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTACTCTCCATGCCCTTCAG.........................	23	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCAATGTACTCTCCATGCCCTTC...........................	25	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................TGAGAGTTAATACAAAAGAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT.....................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATGTACTCTCCATGCCCT.............................	21	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCCAATGTACTCTCCATGCCCTTCAGC........................	29	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCTCCATGCCCTTCAGCTACCTTC.................	27	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAATGTACTCTCCATGCCCTTCT..........................	25	1	1.00	1	1	0	0	0	0	0

dp5

ACACG--------GTGTG---AAAA---TGAATGAATAGAATATT------------------AAA-----------------------------------TCTGTCTCAATTTGTAGCTAACCAATGAGAATGCATATGTACATATGGACCCCATCTATTTATTCTCTTTGGGTCATTTACTTCTCACAAATTAAACGAAGTGTCTGAC-------------AGGATTAT--------C-GAGCTGGTGTAAAATGTAATTTA------A---------------------------------------------------CAGGCGGCTTTATCC--GGAA---AACA---------------------------TTTAAGATTTCCTATAAACGGG-------------------------------------------------------------------------------------GGGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGC---GGA-------TGATA

Size

Hit Count

Total Norm

Total

M022
Male-body

M040
Female-body

M059
Embryo

M062
Head

V043
Embryo

V051
Head

V112
Male-body

SRR902010
Ovary

SRR902011
Testis

SRR902012
CNS imaginal disc

No Reads

droPer2

AATGA--------ATGAA---TAGA---------------ATACT------------------AAA-----------------------------------TCTGTCTCAATTTGTAGCTAACCAATGAGAATGCATATGTACATATGGACCCCATCTATTTATTCTCTTTGGGTCATTTACTTCTCACAATTTAAACGAAGTGTCTGAC-------------AGGATTAT--------C-GAGCTGGTGTAAAATGTAATTTA------A---------------------------------------------------CAGGCGGCTTTATCC--GGAA---AACA---------------------------TTTAAGATTTCCTATAAACAGG-------------------------------------------------------------------------------------GGGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGC---GGA-------TGATA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
No Reads

dsi_12184

2l:11673113-11673262 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads