ID:

dsi_12158

 Coordinate:

x:2199069-2199357 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CATACGATACGGAACTGTGCCGCACATCGATCTAGAGTTCTTCGGACTAGGTAGGGTTATATTGTCGATTGGAAGTTGACTCTGGTCTCCAAGAGGTAACCAACACATTGAAAATCGAACTTAAATTAACTTTTCACGATCACCTTGAGGAAAACAATCAATCAATAGGTGTTGGTTACTTCCTTGACCGAATAGAATTTAGCAAGAATCTTAAATAACTTTTGTATTCCCCCGTTGCCGCTTGGCTTTGTTGTTGGTAAGCTGGCCAGCCATTAGAACTCGTTAAAGCTCTCCACATAAATAACACTCTGTTCTTACACCCAACTCTCCTCTCACCAGATAACGACGTTGGATCTCGTCCGGAATCAGCCTGCACGGAATATCAGGCC
**************************************************((.((((......(((((((...)))))))...((((.....(((((((((((((((((((..((((...................))))..((....))...........)))))..))))))))))))))...))))(((((((.........((((..((((.....)))).)))).......(((....)))..(((((((((..(((((((.((.........)).)))..))))..))).....)))))).)))))))....)))).))..............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
.....................................................................................................................................................................................................................................................................................................................................................AACGACGTTGGATCTCGTC............................. 19 0 1 4.00 4 4 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................CGCTATAACGACGTTGGATCTCGTCCGGA......................... 29 3 1 2.00 2 2 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................GATCTCGTCCGGAATCAGCCT................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................ATAACGACGTTGGATCTCGT.............................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................................CTGCACGGAATATCAGGCC 19 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................AGTTGACTCTGGTCTCCAAGTGGTA................................................................................................................................................................................................................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................TCTCGTCCGGAATCAGCCTGCACGGA.......... 26 0 1 1.00 1 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................................CTGCACGGAATATCAGGAC 19 1 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................TATAACGACGTTGGATCT................................. 18 1 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................ATCTCGTCCGGAATCAGCCT................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................TCTCGTCCGGAATCAGCC.................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................GATCTCGTCCGGAATCAGCCTGCACGG........... 27 0 1 1.00 1 0 1 0 0 0 0 0 0
..............................................................................................................................TCACTTTACACGATTACCTTGA................................................................................................................................................................................................................................................. 22 3 2 0.50 1 0 0 0 0 1 0 0 0
........................................................ATATATTGTCGATTGAAAGT......................................................................................................................................................................................................................................................................................................................... 20 2 2 0.50 1 0 1 0 0 0 0 0 0
................................................................................GCTGGTCTCCAAGAG...................................................................................................................................................................................................................................................................................................... 15 1 3 0.33 1 0 0 0 0 0 0 1 0
................................................AGGTAGGGTTATATGATGGAT................................................................................................................................................................................................................................................................................................................................ 21 3 3 0.33 1 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................TAGCAAGAATGTTAAA.............................................................................................................................................................................. 16 1 4 0.25 1 0 0 0 0 1 0 0 0
.............................................................................................................GAAGATCGGACTTAAATTA..................................................................................................................................................................................................................................................................... 19 2 4 0.25 1 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................................................................................................ACACTCTGTTCCTACACT.................................................................... 18 2 5 0.20 1 0 0 0 0 0 0 0 1
.......................................................................................................CACATTGAACATCGA............................................................................................................................................................................................................................................................................... 15 1 14 0.14 2 0 0 0 0 1 1 0 0
...........................................................................................................................................TCACCTTGAGTAAAACAAA....................................................................................................................................................................................................................................... 19 2 7 0.14 1 0 0 0 0 1 0 0 0
.............................................................................................................................................ACCTTGAGGAAAAGA......................................................................................................................................................................................................................................... 15 1 8 0.13 1 0 0 0 0 0 1 0 0
............................GATCTAGCGTTGTTCGG........................................................................................................................................................................................................................................................................................................................................................ 17 2 9 0.11 1 0 0 0 0 0 1 0 0
..................................................................................................................................................................TAATAGGTGTTGGTT.................................................................................................................................................................................................................... 15 1 14 0.07 1 0 0 0 0 1 0 0 0
............................................GACGAGTTAGGATTATATT...................................................................................................................................................................................................................................................................................................................................... 19 3 14 0.07 1 0 0 0 0 0 1 0 0
................................................................................................................................................................................TACTTCCTTGGCCGA...................................................................................................................................................................................................... 15 1 16 0.06 1 0 0 0 0 0 0 0 1
...............................................................GTGGATTGGAAGATAACTC................................................................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1 0 0 0
................................................................................................................................................................................TACTTCCTTGTCCGAAAGG.................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 1 0 0 0

Anti-sense strand reads

GTATGCTATGCCTTGACACGGCGTGTAGCTAGATCTCAAGAAGCCTGATCCATCCCAATATAACAGCTAACCTTCAACTGAGACCAGAGGTTCTCCATTGGTTGTGTAACTTTTAGCTTGAATTTAATTGAAAAGTGCTAGTGGAACTCCTTTTGTTAGTTAGTTATCCACAACCAATGAAGGAACTGGCTTATCTTAAATCGTTCTTAGAATTTATTGAAAACATAAGGGGGCAACGGCGAACCGAAACAACAACCATTCGACCGGTCGGTAATCTTGAGCAATTTCGAGAGGTGTATTTATTGTGAGACAAGAATGTGGGTTGAGAGGAGAGTGGTCTATTGCTGCAACCTAGAGCAGGCCTTAGTCGGACGTGCCTTATAGTCCGG
**************************************************((.((((......(((((((...)))))))...((((.....(((((((((((((((((((..((((...................))))..((....))...........)))))..))))))))))))))...))))(((((((.........((((..((((.....)))).)))).......(((....)))..(((((((((..(((((((.((.........)).)))..))))..))).....)))))).)))))))....)))).))..............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M053
female body
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 SRR1275483
Male prepupae		 SRR1275487
Male larvae
....................................................................................................................................................................................AGGAGCTGGCTAATCATAA.............................................................................................................................................................................................. 19 3 14 15.29 214 168 40 0 0 0 3 1 0 1 1
....................................................................................................................................................................................AGGAGCTGGCTAATCATA............................................................................................................................................................................................... 18 3 20 4.05 81 81 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CCAATTCAGGAACTGGCTAA.................................................................................................................................................................................................... 20 3 6 2.50 15 10 5 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CCAATTAAGGAGCTGGCTAAT................................................................................................................................................................................................... 21 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CCAATTCAGGAGCTGGCTTAT................................................................................................................................................................................................... 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CCAATTCAGGAACTGGCTAAT................................................................................................................................................................................................... 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CCAATTAAGGAGCTGGCTAATC.................................................................................................................................................................................................. 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CCAATGCAGGAGCTGGCTAAT................................................................................................................................................................................................... 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CCAATTCAGGAACTGGCTAATC.................................................................................................................................................................................................. 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................ACTGGCTTATCTTAAATC........................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................CCAATTAAGGAGCTGGCTAA.................................................................................................................................................................................................... 20 3 2 1.00 2 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................TCGGTCATGTTGAGCAATTTCT.................................................................................................... 22 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................AAACGAATGAAGGAACTGGCT...................................................................................................................................................................................................... 21 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................CAGGAACTGGCTAATCATAA.............................................................................................................................................................................................. 20 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CCAATTCAGGAGCTGGCTTA.................................................................................................................................................................................................... 20 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TCTTAAATCGCTCAGAGAATTT.............................................................................................................................................................................. 22 3 6 0.17 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................GCTCGTGTAACTCCTTTTATT........................................................................................................................................................................................................................................ 21 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................AGTGCAACCTAGAGCAGGG........................... 19 3 9 0.11 1 0 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................................................................................................................................................................................................AACCCAGAGCAGGCCCTAGA..................... 20 3 9 0.11 1 0 0 0 0 0 0 1 0 0 0
..............................AGATCGCTAGCAGCCTGA..................................................................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................ATGTGAGTTGAGAGGAC......................................................... 17 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................ACATAAGGGCGCAAGG....................................................................................................................................................... 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................CTCTTGTTAGTTAGT................................................................................................................................................................................................................................. 15 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:2199019-2199407 - dsi_12158 CATACGATACGGAACTGTGCCGCACATCGATCTAGAGTTCTTCGGACTAGGTAGGGTTATA-TTG------T-----------CGATTG-GAAGTTGACTCTGGTCTCCAAGAGG---TAACCAACAC--ATTGAAAA-------------------TCGAACTTA-------AATTAACTTTTCACGATCA-----CCTTGAGGAA-----AA-CAATCAAT----CA---------ATA-GGTGT--------------------------------TGGTTACTTCCTTGACCGAATAGA-------------------ATT-TA-GCAA---GAA-TCTT---------AAATAACT-----TTTGTATTCCCCCGTTGCC-GCTTGGCTTTGTTGTTGGTAAG---CTG-GCCAGCCA--TTAGAACTCG-TTAAAGCTCTCCA----CATAAAT--------AACACTCTGT---TCT-TACACCCA---------------ACTCTCCTCTC-ACCAGATAACGACGTT---GGATCTCGTCCGGAATCAGCCTGCACGGAATATCAGGCC
droSec2 scaffold_10:2160625-2161021 - CATACGATACGGAACTGTGCCGCACATCGATCTAGAGTTCTTCGGACTAGGTAGGGTTATA-TTG------T-----------TGATTG-GAAGTTGACTCTGGTCTCCAAGAGG---TAACCAACAC--ATCGAAAA-------------------TCGAACTTA-------AATTAACTT--CACGATCA-----CCTTGAAAAAAAAAAAA-CAATCAAT----CA---------ATA-AGTGT--------------------------------TGGTTACTTCCTTGACCGAATAGA-------------------ATT-TT-GCAA---GAA-TCTT---------AAATAACTTGTATTTTGTATTCCCCCGTTGCC-GCTTGGCTTTGTTATTGGTAAG---CTG-GCCAGCCA--TTAGAACTCG-TCAGAGCTCTCCA----CATAAAT--------AACACTCTGT---TCT-TACCCCCA---------------ACTCTCCTCTC-ACCAGATAACGACGTT---GGATCTCGTCCGGAATCAGCCTGCACGGAATATCAGGCC
dm3 chrX:2384826-2385227 - CATACGATATGGAACAGTGCCGCACATCGATCTAGAGTTCTTCGGACTAGGTAGGGTTATA-TTG------G-----------CCATTT-GAAGTTGACTCTGGTCTCCAAGAGG---TAACCAACAC--TTTGAAAA-------------------TCGAACTTTTACCAATAATTAATATACCACGATCA-----CCTTGAAGAA-----AAGCAATAAAT----CG---------ATA-AGTGT--------------------------------TGATTACTTCCTTGACCGAATAGA-------------------ATT-TA-GCAA---GAA-TCTT---------TAATAACT-----TTTGTATTCTTCCGTTGCC-GCTTGGCTTTGTTATTGGTAAG---CTG-GCCAGCCCCATTAGACCTCG-TCAGATCTGTCTA----GATATAT--------AACACTCGGTTTTTTT-TATCCCCC---------------ACCTTCCTCTC-GCCAGATAACGACGTT---GGATCCCGTCCGGAATCAGCCTGCACGGAATATCAGGCC
droEre2 scaffold_4644:2334102-2334476 - CATACGATATGGAACCGTGCCGCACATCGATCTAGAGTTCTTCGGACTAGGTAGGGTTATA-CCAGTATTTG-----------TCATTG-AAAGTTGGCTCGGGCCTCCACGAGG---TAACCAGCAC--TTCAAAAA-------------------CCGAA-----------------------------------CCTTGAAGAA-----AA-CACT--------CAA--TATAGCATA-AGTGT--------------------------------TGGTTACTTTCCCGACCGAATCGA-------------------ATT-TT-GCAA---GAA-TCTT---------AAATAACT-----CTTTTATTCCCCTATTGCC-GCTTGGCTTTGTTATTGGTAAG---CTGGGCCAGCCA--TTAAACCTCG-TCAGAGTTCTCAA----AAAAAAT--------AACATT----TTTTCG-CATCCCCA---------------ACTCTGCTCCT-ACCAGATAACGATGCT---GCATTCCGTCCGGAATCAGCGTGTACGGAGTATCAGGCC
droYak3 X:5960762-5961088 + CATACGCTATGGAACTGTGCCGCACATCGATCTAGAGTTCTTCGGACTAGGTAGGGTTATG-TTG------G-----------GCATT--------------------AA--AGGTATTAACCACCAC--TTCAAAAA-------------------T-----------------------------------------------------------------GAAGCAATATATATCACA-AGTGT--------------------------------TGGTTACTTCCTTGACCGAATAGA-----------------------------------A-TCTT---------AAATAACTT---TCTCTTATTCCCCTGATGCC-GCTTGGCTTTGTTATTGGTAAG---CTG-GCTAGCCA--TTAAACCTCG-TCATAGCTCCATA----GATAAAT--------AACACT----TTTTGG-CACCCTTA---------------ACTCTCCTCTC-AACAGATAACGACGTT---GGATCCCGTCCGGAATCAGCCTGTACGGAATACCAGGCC
droEug1 scf7180000409277:69660-69982 - TATTCGATATGGAACTGTGCCACACATCGATCTTGAGTTCTTTGGACTAGGTAGGGTTATA-CCA-------------------------AA-------T----------AGGGG---TTACCACTACACTTGT-TAA-------------------CTAAG-------------------------------------------------------------GTAGC-----------AA-AGTGT--------------------------------TGGTAACTCCCTAAACAGAATATG-------------------TCATTG-TCCA---AAT-TGCT---------TATTAACT-----TTTCTATTCACATTTTGCC-GCTTGGCTTTGTTATTGGTAAGCTTTTG-GTTAGACT--TTCAAACTT---CAAAGCAACCAT----TAAAA------TTA-----TT----CTTTCC-GCTCCTTG---------------ACTATCCTCCT-CTCAGATAACGATGTG---GGATCCCGTCCGGACACAGCCTGCTCAGAATACCAGGCC
droBia1 scf7180000301760:4781252-4781604 + TATACGTTATGGAAGTGTTCCACACATCGATTTCGAGTTCTTCGGACTAGGTAGGCCTT-----------------------------------------CGGGTTCTCAAGG-AGGGTTACCACCAC--TTGAAAAA-------------------TTACGGTTA-------T----G---CTTTAGTTTTATTAG---------------------------AAGCT---------AAA-AGTGT--------------------------------TGGTAACTCCATGAACGGAATAGA-------------------GTT-TA-ACAA---AT--TCTT-------TAAAATAACT-----TCTTAATTCCCATTTTGCC-GCTTGGCTTTATTATTGGTAAG---CTG-GTTGGCCC--TTCAACCTTT-CCAGACCCCC-TACT--GATAA----------AGCACTATT-TTCTCCGCTTCTTGA---------------AATATCCTCTC-CATAGCGAACGACCTC---GAATCCCGACCGGACGCAGCCTGTTCAGAATTCCAGGCC
droTak1 scf7180000415151:422581-422890 + TATACGATACGGAACTGTTCCACACATCGATCTTGAGTTCTTTGGACTAGGTAGGGTTT------------------------------------------GGGTTCCTATGGGG---TTACCACCAC--ATGA-AAA-------------------TCTAG-------------------------------------------------------------------------AATACA-CGTGT--------------------------------TGGTAACT-CCGTAATC---TAGA-------------------ATT-TG-CCAA---AAC-TTTT---------CATTAACT-----TTTAAATCTCCAATTTGCC-GCTTGGCTATATTATTGGTAAG---CTG-GTTAGCCC--TTCAAACTTTCTCAGAACTCTCCT----AATAA----------AACATT-------------AACTTA---------------ACTTTCCTCTCCTCCAGTAAACGAACGC---GAAATCCGTCCGGAATCAGCCTGTACGGAGTACCAGGCC
droEle1 scf7180000491011:701384-701672 - CATAAGATATGGTACTGTGCCACACATTGATCTTGAGTTTTTTGGACTAGGTAGGGTTTCA-------------------------TTT-AAAGTTGCTTTAGGGCTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCTCCAACGAAACT-------------------------TG-ACTTACACAT-TTTT---------ATATAACT-----TTTCTCTTCCCATTTTGCC-ACTTGGCTCTGTTATTGGTAAG---CTG-AAAGGCGC--TTTAACCTTTCGCAGACC-CTCAT----TATAA------TTA-----TT----TTTTCC-GTTCCTCT---------------ACTTTCCTCTG-CTCAGATAACGACTTG---TCATCCCGCCCGAGCTCAGCCTGCTCTGAACACCAGTCC
droRho1 scf7180000779506:491843-492127 - CATAAGATATGGAACTGTGCCACACATTGATCTTGAGTTCTTTGGACTAGGTAGGGTTACA-------------------------TTT-AAAGTTGCTTTGGGGCTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCCCCTGCCTAA------------------------ACT-TG-GCTA---GAACTGTT---------TAATAATG-----TTTGTCTCCCCACTTTGCC-GCATGGCTTTATTTTTGGTAAG---CTG-GTTAACCC--TTCAAACTTT-CCAGACCTCCAT-----TATAA------TTA-----T-----TTTTCC-GCCCCTTT---------------ACTCTCCTCTG-TCCAGTTAACGACTTG---GCATCCCGTCCGAGCGCAGCCTGTTTGGAATACCAGTCG
droFic1 scf7180000453927:185401-185768 - TATAAGATACGGCACGGTGCCACACATCGACCTCGAGTTCTTTGGACTAGGTAGGGTTTAAATGG------G-----------GCATCT-CCAGTTGGGTGCGGGTTTGG-GAAG---CTACCTCCAT--TTTTAGAGAGGTTTTAAAGAGGTTTCAC-----------------------------------------------------------------GAACCAA--TTCATTGTG-AATAG--------------------------------CGGTAGCTTCCTGAACAGAACCCAACTTTAGATGGT-------ATA-TG-GCTA---GAACTTTT---------TAATAAT-------CTCGTTTCCCCCTTTGCC-GCATGGCTTTCTTGGTAAGGAG---CTG-GTTACCAC--CAAGGATTTT-CGAGACCA-----------TCAAT--------AACATC------------CTCCCTA---------------ACTATCCTCTC-CTCAGATCACGACGTG---GCTGCCCGTCCCGAATCAGCCTGCTCGGAATACCAGGCG
droKik1 scf7180000302258:524099-524153 - CATACGCTATGGCACGGTGCCGCACATTGGTCTCGAGTTCTTTGGCCTAGGTAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12929:2294967-2295024 - AATACGGTACGGGACAGTGCCTCACATCGATCTCGAGTTCTTCGGTCTAGGTAGGACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396434:288795-288913 - AATTCGCTATGGCACAGTGCCCCACATCGATCTCGAGTTCTTCGGTCTAGGTAGGATTT-A-TAG------TCCTTTGTGATCCC-TTGTGATCTTGACTTTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTATTTAAAAATAATCAATA--------------
dp5 XL_group3a:2060656-2060840 - AATGCTAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA------------ACTCTTCTCTCTCTCT-----CCCATCCAATCCCTATGCC-GCATGGCTCTGGGCCTGGTAAG---CCA-GTAGGCCC--A-CGTCCTTC-CCTAAGCTCTA----------------------GCACTACTC---ACT-ATATCCCT---------------GTTCTCATCCC-GACAGATAATGACTTG---GGTGCCCGTCCGAGCACAGCCTGCAGCCAGTACCAGGCC
droPer2 scaffold_11:2615487-2615671 + AATGCTAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA------------ACTCTTCTCTCTCTCT-----CCCATCCAATCCCTATGCC-GCATGGCTCTGGGCCTGGTAAG---CCA-GTAGGCCC--A-CGTCCTTC-CCTAAGCTCTA----------------------GCACTACTC---ACT-ATATCCCT---------------GTTCTCATCCC-GACAGATAATGACTTG---GGTGCCCGTCCGAGCACAGCCTGCAGCCAGTACCAGGCC
droWil2 scf2_1100000004909:12092992-12093348 - CATTAAATACGGCCATGTGCCTCATATTGATCTTGAGTTTTTTGGTCTAGGTAGGAAAACT-CTT------G-----------CAA-AA-AAAGTT-----AGGGAAAG----GG---TCTTCAAAAC--AT---AGA-------------------T-GGA-----------------------------------CCTGGGAATA-----G-----TCTCT----CAG--TAGGG--------TTCCAA-----CTCTGTCGTGA------------AGCCTTCT---------------A-------------------GTT-TGGTCAA---TAA-TATTAATTTTACTCTTATTTG----ATTCCCTCTCTATTAATGCC-GCTTG---TGGCGCTTGGTAAG---CTT-TTGGGTTG--A--AAAC-----------TCTCGACAGAA-ATAATGGAATTCCCGATTG-------------ACACTTTCTCTCTCTTTTTTTAATA-TCTGTC-TCTAGACAACAATGTG---GAA---CGACCACCGACAGCATGTAACGAACATCAGGCA
droVir3 scaffold_12928:1379113-1379365 - dvi_8455 AATCAATCAATCAATCAATTAAATCACTTCTATAGAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGACCAACTCCAGCTTCTGAACGTAGATAGAGCT-TT-AGC--------TAAT---------ACACAATC----TCTTTTTTATGCCCAATGCC-GCCTGGCCACTTTTTTGGTAAG---AGG-GTTTATGT--GCAAAATTTG-CAAGATCCTTGCT----AA-------------AACATT----TTCCTT-GCTTT--------------------GTTTTATTC-CACAGTTAACACTGTCGAACACGATCGCCCGCAAACAGCCTGCAGCGAGTACCAGGCG
droMoj3 scaffold_6473:13629472-13629901 + AATCAAATATGGCACCGTTCCACATATTGATCTTGAATTCTTTGGTCTAGGTAAATTTGG---AA------GTTTTCGTAAGCTGATTT-GGAGCTGGACTTGGTCTTTGATAGA---TAGTAAAAAC--ATTCCTTA-------------------AGGAATTTC-------AATATACTTCATTAGATAA-----ATTAGATGGA---AAAT-CATTTCAT----CA---------ATGCGGCGT-TAGGTAGCATTTATTGAAAGTCTTAGACCAATGTCAGCTCCACGAATCATATT------------------TGAGCA-TT-AGAT---AAT-CCAT---------AAAATATT-----TTTCAATTCTCCTACTGCCAACCTGGCTATTATGCTGGTAAG---ACTGAATAGGTC--A-CAACTATG-ACGGAATTCTTG-------AAG------CTATAGCTCT-------------GTACGTGTG------------CTCTTCTATTC-GACAGTCAATATCGACGAACACGAACGCCCACCGACAGCCTGTACCGAATACCAGGCG
droGri2 scaffold_15203:8352019-8352071 + AATCAAGTATGGCACCGTGCCGCATATTGATCTCGAGTTCTTTGGCCTTGGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CATACGATACGGAACTGTGCCGCACATCGATCTAGAGTTCTTCGGACTAGGTAGGGTTATA-TTG------T-----------CGATTG-GAAGTTGACTCTGGTCTCCAAGAGG---TAACCAACAC--ATTGAAAA-------------------TCGAACTTA-------AATTAACTTTTCACGATCA-----CCTTGAGGAA-----AA-CAATCAAT----CA---------ATA-GGTGT--------------------------------TGGTTACTTCCTTGACCGAATAGA-------------------ATT-TA-GCAA---GAA-TCTT---------AAATAACT-----TTTGTATTCCCCCGTTGCC-GCTTGGCTTTGTTGTTGGTAAG---CTG-GCCAGCCA--TTAGAACTCG-TTAAAGCTCTCCA----CATAAAT--------AACACTCTGT---TCT-TACACCCA---------------ACTCTCCTCTC-ACCAGATAACGACGTT---GGATCTCGTCCGGAATCAGCCTGCACGGAATATCAGGCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGACGTT---GGATCTCGTC.............................1914.00400400000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGTCCGGAATCAGCCT.................2112.00200200000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACGACGTT---GGATCTCGT..............................2011.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCACGGAATATCAGGCC1911.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTCCGGAATCAGCCTGCACGGA..........2611.00100000010000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCGTCCGGAATCAGCCT.................2011.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTCCGGAATCAGCC..................1811.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGTCCGGAATCAGCCTGCACGG...........2711.00101000000000000000
droSec2
CATACGATACGGAACTGTGCCGCACATCGATCTAGAGTTCTTCGGACTAGGTAGGGTTATA-TTG------T-----------TGATTG-GAAGTTGACTCTGGTCTCCAAGAGG---TAACCAACAC--ATCGAAAA-------------------TCGAACTTA-------AATTAACTT--CACGATCA-----CCTTGAAAAAAAAAAAA-CAATCAAT----CA---------ATA-AGTGT--------------------------------TGGTTACTTCCTTGACCGAATAGA-------------------ATT-TT-GCAA---GAA-TCTT---------AAATAACTTGTATTTTGTATTCCCCCGTTGCC-GCTTGGCTTTGTTATTGGTAAG---CTG-GCCAGCCA--TTAGAACTCG-TCAGAGCTCTCCA----CATAAAT--------AACACTCTGT---TCT-TACCCCCA---------------ACTCTCCTCTC-ACCAGATAACGACGTT---GGATCTCGTCCGGAATCAGCCTGCACGGAATATCAGGCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT---GGATCTCGTCCGGAATCAGC...................2312.0020020
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACGACGTT---GGATCTCGTCCG...........................2311.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTT---GGATCTCGTCCGGAATCAGCC..................2511.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---GGATCTCGTCCGGAATCAGC...................2111.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGTCCGGAATCAGCCTGCACGGA..........2811.0010100
dm3
CATACGATATGGAACAGTGCCGCACATCGATCTAGAGTTCTTCGGACTAGGTAGGGTTATA-TTG------G-----------CCATTT-GAAGTTGACTCTGGTCTCCAAGAGG---TAACCAACAC--TTTGAAAA-------------------TCGAACTTTTACCAATAATTAATATACCACGATCA-----CCTTGAAGAA-----AAGCAATAAAT----CG---------ATA-AGTGT--------------------------------TGATTACTTCCTTGACCGAATAGA-------------------ATT-TA-GCAA---GAA-TCTT---------TAATAACT-----TTTGTATTCTTCCGTTGCC-GCTTGGCTTTGTTATTGGTAAG---CTG-GCCAGCCCCATTAGACCTCG-TCAGATCTGTCTA----GATATAT--------AACACTCGGTTTTTTT-TATCCCCC---------------ACCTTCCTCTC-GCCAGATAACGACGTT---GGATCCCGTCCGGAATCAGCCTGCACGGAATATCAGGCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................ATCTAGAGTTCTTCGGACTAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TCTAGAGTTCTTCGGACTAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CAGTGCCGCACATCGATCTAGAGTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
..TACGATATGGAACAGTGCCGCACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGTT---GGATCCCGTCC............................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATCTAGAGTTCTTCGGACTAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TCCAAGAGG---TAACCAACAC--TTTGAAAA-------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TTATA-TTG------G-----------CCATTT-GAAGTTGACTCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TATA-TTG------G-----------CCATTT-GAAGTTGACTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGGAATCAGCCTGCAC.............1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TACGATATGGAACAGTGCCGCACATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............ACAGTGCCGCACATCGATCTAGAGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
........................................................................................................TCTCCAAGAGG---TAACCAACAC--TTTGAAAA-------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGTTATTGGTAAG---CTG-GCC................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................GACCGAATAGA-------------------ATT-TA-GCAA---GAA-TCT...........................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---GGATCCCGTCCGGAATCAGCCTGCACG............2811.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TAGAGTTCTTCGGACTAGGTAGGGTTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCCCGTCCGGAATCAGCCTGCAC.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT---GGATCCCGTCCGGAATCAGC...................2311.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT---GGATCCCGTCCGGAAT.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................GGGTTATA-TTG------G-----------CCATTT-GA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TACGATATGGAACAGTGCCGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCGGAATCAGCCTGCAC.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCTC-GCCAGATAACGACGTT---GGAAA..................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCACGGAATATCAGGC.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACCTCG-TCAGATCTGTCTA----GATATA.......................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATGGAACAGTGCCGCACATCGATCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCGGAATCAGCCTGCACGGA..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGATAACGACGTT---GG.....................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCCCGTCCGGAATCAGCCTGCACG............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAATCAGCCTGCACGGAAT........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCGTCCGGAATCAGCCTGCACGGAA.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.ATACGATATGGAACAGTGCCGCACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................................................................................................................................................................................................AAT----CG---------ATA-AGTGT--------------------------------TGATTACTTCCTTGACC..........................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................T--------------------------------TGATTACTTCCTTGACCGAATAGA-------------------A...............................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TCGATCTAGAGTTCTTCGGACTAGGATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTCCGGAATCAGCCTGCACGGAAT........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................AACCAACAC--TTTGAAAA-------------------TCGAACTTT............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ATCGATCTAGAGTTCTTCGGACTAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TCTCCAAGAGG---TAACCAACAC--TT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGAATCAGCCTGCACGGAATATA.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................CGATCA-----CCTTGAAGAA-----AAG...........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..........................................................ATA-TTG------G-----------CCATTT-GAAGTTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTT---GGATCCCGTCCGGAATCAGCC..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TTCCTTGACCGAATAGA-------------------AT..............................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCGGAATCAGCCTGCA..............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGAATCAGCCTGCACGGAATA.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGACCTCG-TCAGATC.......................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TT-GAAGTTGACTCTGGTCTCCAAGAGG---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGTT---GGATCCCGTCCGGA.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AGAGTTCTTCGGACTAGGTAGGGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCTC-GCCAGATAACGACGTT---GGA....................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCCC---------------ACCTTCCTCTC-GCC.......................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAATCAGCCTGCACGGAATATCA....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCCCGTCCGGAATCAGCCTGCA..............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGACGTT---GGATCCCGTCCGGAAT.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TGCC-GCTTGGCTTTGTTATTGGTAAG---C......................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT---GGATCCCGTCCGGAATCAGCCT.................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CAGTGCCGCACATCGATCTAGAGTTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGTCCGGAATCAGCCTG................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.................TGCCGCACATCGATCTAGAGTTCTTCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCGTCCGGAATCAGCCTGC...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGACGTT---GGATCCCGTCCGGAA........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................TTGACTCTGGTCTCCAAGATT---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGATCTGTCTA----GATATAT--------AACACT........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TATGGAACAGTGCCGCACATCGATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAGCCTGCACGGAATAT......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TTCGGACTAGGTAGGGTTATA-TTG------G-----------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............AGTGCCGCACATCGATCTAGAGTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACGACGTT---GGATCCCGT..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTT---GGATCCCGTCCGG..........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TTTACCAATAATTAATAA............................................................................................................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
droEre2
CATACGATATGGAACCGTGCCGCACATCGATCTAGAGTTCTTCGGACTAGGTAGGGTTATA-CCAGTATTTG-----------TCATTG-AAAGTTGGCTCGGGCCTCCACGAGG---TAACCAGCAC--TTCAAAAA-------------------CCGAA-----------------------------------CCTTGAAGAA-----AA-CACT--------CAA--TATAGCATA-AGTGT--------------------------------TGGTTACTTTCCCGACCGAATCGA-------------------ATT-TT-GCAA---GAA-TCTT---------AAATAACT-----CTTTTATTCCCCTATTGCC-GCTTGGCTTTGTTATTGGTAAG---CTGGGCCAGCCA--TTAAACCTCG-TCAGAGTTCTCAA----AAAAAAT--------AACATT----TTTTCG-CATCCCCA---------------ACTCTGCTCCT-ACCAGATAACGATGCT---GCATTCCGTCCGGAATCAGCGTGTACGGAGTATCAGGCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCGGAATCAGCGTGTACGGA..........2312.0020001010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCT---GCATTCCGTCCGGA.........................2012.0022000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATCAGCGTGTACGGA..........1811.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGGAATCAGCGTGTACG............2011.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCGGAATCAGCGTGTACGGAGT........2511.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCT---GCATTCCGTCCGGA.........................1911.0010001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGTACGGAGTATCAGGC.2011.0010100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTGTACGGAGTATCAG...1911.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCCA---------------ACTCTGCTCCT-ACC.......................................................2111.0010000010
....................................................................................................................................................................................................................................................TGT--------------------------------TGGTTACTTTCCCCG............................................................................................................................................................................................................................................................................................1870.1411000000
droYak3
CATACGCTATGGAACTGTGCCGCACATCGATCTAGAGTTCTTCGGACTAGGTAGGGTTATG-TTG------G-----------GCATT--------------------AA--AGGTATTAACCACCAC--TTCAAAAA-------------------T-----------------------------------------------------------------GAAGCAATATATATCACA-AGTGT--------------------------------TGGTTACTTCCTTGACCGAATAGA-----------------------------------A-TCTT---------AAATAACTT---TCTCTTATTCCCCTGATGCC-GCTTGGCTTTGTTATTGGTAAG---CTG-GCTAGCCA--TTAAACCTCG-TCATAGCTCCATA----GATAAAT--------AACACT----TTTTGG-CACCCTTA---------------ACTCTCCTCTC-AACAGATAACGACGTT---GGATCCCGTCCGGAATCAGCCTGTACGGAATACCAGGCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGACGTT---GGATCCCGTCC............................2011.00101000000000
droEug1
TATTCGATATGGAACTGTGCCACACATCGATCTTGAGTTCTTTGGACTAGGTAGGGTTATA-CCA-------------------------AA-------T----------AGGGG---TTACCACTACACTTGT-TAA-------------------CTAAG-------------------------------------------------------------GTAGC-----------AA-AGTGT--------------------------------TGGTAACTCCCTAAACAGAATATG-------------------TCATTG-TCCA---AAT-TGCT---------TATTAACT-----TTTCTATTCACATTTTGCC-GCTTGGCTTTGTTATTGGTAAGCTTTTG-GTTAGACT--TTCAAACTT---CAAAGCAACCAT----TAAAA------TTA-----TT----CTTTCC-GCTCCTTG---------------ACTATCCTCCT-CTCAGATAACGATGTG---GGATCCCGTCCGGACACAGCCTGCTCAGAATACCAGGCCSizeHit CountTotal NormTotal
No Reads
droBia1
TATACGTTATGGAAGTGTTCCACACATCGATTTCGAGTTCTTCGGACTAGGTAGGCCTT-----------------------------------------CGGGTTCTCAAGG-AGGGTTACCACCAC--TTGAAAAA-------------------TTACGGTTA-------T----G---CTTTAGTTTTATTAG---------------------------AAGCT---------AAA-AGTGT--------------------------------TGGTAACTCCATGAACGGAATAGA-------------------GTT-TA-ACAA---AT--TCTT-------TAAAATAACT-----TCTTAATTCCCATTTTGCC-GCTTGGCTTTATTATTGGTAAG---CTG-GTTGGCCC--TTCAACCTTT-CCAGACCCCC-TACT--GATAA----------AGCACTATT-TTCTCCGCTTCTTGA---------------AATATCCTCTC-CATAGCGAACGACCTC---GAATCCCGACCGGACGCAGCCTGTTCAGAATTCCAGGCCSizeHit CountTotal NormTotal
No Reads
droTak1
TATACGATACGGAACTGTTCCACACATCGATCTTGAGTTCTTTGGACTAGGTAGGGTTT------------------------------------------GGGTTCCTATGGGG---TTACCACCAC--ATGA-AAA-------------------TCTAG-------------------------------------------------------------------------AATACA-CGTGT--------------------------------TGGTAACT-CCGTAATC---TAGA-------------------ATT-TG-CCAA---AAC-TTTT---------CATTAACT-----TTTAAATCTCCAATTTGCC-GCTTGGCTATATTATTGGTAAG---CTG-GTTAGCCC--TTCAAACTTTCTCAGAACTCTCCT----AATAA----------AACATT-------------AACTTA---------------ACTTTCCTCTCCTCCAGTAAACGAACGC---GAAATCCGTCCGGAATCAGCCTGTACGGAGTACCAGGCCSizeHit CountTotal NormTotal
No Reads
droEle1
CATAAGATATGGTACTGTGCCACACATTGATCTTGAGTTTTTTGGACTAGGTAGGGTTTCA-------------------------TTT-AAAGTTGCTTTAGGGCTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCTCCAACGAAACT-------------------------TG-ACTTACACAT-TTTT---------ATATAACT-----TTTCTCTTCCCATTTTGCC-ACTTGGCTCTGTTATTGGTAAG---CTG-AAAGGCGC--TTTAACCTTTCGCAGACC-CTCAT----TATAA------TTA-----TT----TTTTCC-GTTCCTCT---------------ACTTTCCTCTG-CTCAGATAACGACTTG---TCATCCCGCCCGAGCTCAGCCTGCTCTGAACACCAGTCCSizeHit CountTotal NormTotal
No Reads
droRho1
CATAAGATATGGAACTGTGCCACACATTGATCTTGAGTTCTTTGGACTAGGTAGGGTTACA-------------------------TTT-AAAGTTGCTTTGGGGCTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCCCCTGCCTAA------------------------ACT-TG-GCTA---GAACTGTT---------TAATAATG-----TTTGTCTCCCCACTTTGCC-GCATGGCTTTATTTTTGGTAAG---CTG-GTTAACCC--TTCAAACTTT-CCAGACCTCCAT-----TATAA------TTA-----T-----TTTTCC-GCCCCTTT---------------ACTCTCCTCTG-TCCAGTTAACGACTTG---GCATCCCGTCCGAGCGCAGCCTGTTTGGAATACCAGTCGSizeHit CountTotal NormTotal
No Reads
droFic1
TATAAGATACGGCACGGTGCCACACATCGACCTCGAGTTCTTTGGACTAGGTAGGGTTTAAATGG------G-----------GCATCT-CCAGTTGGGTGCGGGTTTGG-GAAG---CTACCTCCAT--TTTTAGAGAGGTTTTAAAGAGGTTTCAC-----------------------------------------------------------------GAACCAA--TTCATTGTG-AATAG--------------------------------CGGTAGCTTCCTGAACAGAACCCAACTTTAGATGGT-------ATA-TG-GCTA---GAACTTTT---------TAATAAT-------CTCGTTTCCCCCTTTGCC-GCATGGCTTTCTTGGTAAGGAG---CTG-GTTACCAC--CAAGGATTTT-CGAGACCA-----------TCAAT--------AACATC------------CTCCCTA---------------ACTATCCTCTC-CTCAGATCACGACGTG---GCTGCCCGTCCCGAATCAGCCTGCTCGGAATACCAGGCGSizeHit CountTotal NormTotal
No Reads
droKik1
CATACGCTATGGCACGGTGCCGCACATTGGTCTCGAGTTCTTTGGCCTAGGTAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
AATACGGTACGGGACAGTGCCTCACATCGATCTCGAGTTCTTCGGTCTAGGTAGGACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AATTCGCTATGGCACAGTGCCCCACATCGATCTCGAGTTCTTCGGTCTAGGTAGGATTT-A-TAG------TCCTTTGTGATCCC-TTGTGATCTTGACTTTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTATTTAAAAATAATCAATA--------------SizeHit CountTotal NormTotal
No Reads
dp5
AATGCTAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA------------ACTCTTCTCTCTCTCT-----CCCATCCAATCCCTATGCC-GCATGGCTCTGGGCCTGGTAAG---CCA-GTAGGCCC--A-CGTCCTTC-CCTAAGCTCTA----------------------GCACTACTC---ACT-ATATCCCT---------------GTTCTCATCCC-GACAGATAATGACTTG---GGTGCCCGTCCGAGCACAGCCTGCAGCCAGTACCAGGCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGACTTG---GGTGCCCGTC.............................2111.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGACTTG---GGTGCCCGTCC............................2211.0010010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTC---ACT-ATATCCCT---------------GTTCTCATCCC-GA........................................................2811.0010001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC---ACT-ATATCCCT---------------GTTCTCATCCC-GAC.......................................................2711.0010100000000
droPer2
AATGCTAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA------------ACTCTTCTCTCTCTCT-----CCCATCCAATCCCTATGCC-GCATGGCTCTGGGCCTGGTAAG---CCA-GTAGGCCC--A-CGTCCTTC-CCTAAGCTCTA----------------------GCACTACTC---ACT-ATATCCCT---------------GTTCTCATCCC-GACAGATAATGACTTG---GGTGCCCGTCCGAGCACAGCCTGCAGCCAGTACCAGGCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGACTTG---GGTGCCCGTCCGA..........................2411.001001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACTTG---GGTGCCCGTCCGAGC........................2311.001001000
droWil2
CATTAAATACGGCCATGTGCCTCATATTGATCTTGAGTTTTTTGGTCTAGGTAGGAAAACT-CTT------G-----------CAA-AA-AAAGTT-----AGGGAAAG----GG---TCTTCAAAAC--AT---AGA-------------------T-GGA-----------------------------------CCTGGGAATA-----G-----TCTCT----CAG--TAGGG--------TTCCAA-----CTCTGTCGTGA------------AGCCTTCT---------------A-------------------GTT-TGGTCAA---TAA-TATTAATTTTACTCTTATTTG----ATTCCCTCTCTATTAATGCC-GCTTG---TGGCGCTTGGTAAG---CTT-TTGGGTTG--A--AAAC-----------TCTCGACAGAA-ATAATGGAATTCCCGATTG-------------ACACTTTCTCTCTCTTTTTTTAATA-TCTGTC-TCTAGACAACAATGTG---GAA---CGACCACCGACAGCATGTAACGAACATCAGGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAATGTG---GAA---CGACCACCGACAGCAT.................2912.00220000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTG---GAA---CGACCACCGACAGCATGTAAC............2811.00101000
droVir3
AATCAATCAATCAATCAATTAAATCACTTCTATAGAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGACCAACTCCAGCTTCTGAACGTAGATAGAGCT-TT-AGC--------TAAT---------ACACAATC----TCTTTTTTATGCCCAATGCC-GCCTGGCCACTTTTTTGGTAAG---AGG-GTTTATGT--GCAAAATTTG-CAAGATCCTTGCT----AA-------------AACATT----TTCCTT-GCTTT--------------------GTTTTATTC-CACAGTTAACACTGTCGAACACGATCGCCCGCAAACAGCCTGCAGCGAGTACCAGGCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGTCGAACACGATCGCC.............................2012.002020000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAACAGCCTGCAGCGAGTACCAGGC.2811.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTAAG---AGG-GTTTATGT--GCA......................................................................................................................................................2311.001000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACACGATCGCCCGCAAACAGCCTGC...............2711.001000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TAGAGCT-TT-AGC--------TAAT---------ACACAATC----TCT..................................................................................................................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGCGAGTACCAGGC.1811.001000000000000000000000000000000000000000000000000000000000001000
droMoj3
AATCAAATATGGCACCGTTCCACATATTGATCTTGAATTCTTTGGTCTAGGTAAATTTGG---AA------GTTTTCGTAAGCTGATTT-GGAGCTGGACTTGGTCTTTGATAGA---TAGTAAAAAC--ATTCCTTA-------------------AGGAATTTC-------AATATACTTCATTAGATAA-----ATTAGATGGA---AAAT-CATTTCAT----CA---------ATGCGGCGT-TAGGTAGCATTTATTGAAAGTCTTAGACCAATGTCAGCTCCACGAATCATATT------------------TGAGCA-TT-AGAT---AAT-CCAT---------AAAATATT-----TTTCAATTCTCCTACTGCCAACCTGGCTATTATGCTGGTAAG---ACTGAATAGGTC--A-CAACTATG-ACGGAATTCTTG-------AAG------CTATAGCTCT-------------GTACGTGTG------------CTCTTCTATTC-GACAGTCAATATCGACGAACACGAACGCCCACCGACAGCCTGTACCGAATACCAGGCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACACGAACGCCCACCGAC......................2011.001100000
.................................................................................................................................................................ATTTC-------AATATACTTCATTAGAT....................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGCCCACCGACAGCC..................1811.001100000
droGri2
AATCAAGTATGGCACCGTGCCGCATATTGATCTCGAGTTCTTTGGCCTTGGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 03:58 AM