ID:

dsi_12040

 Coordinate:

3r:16362916-16363065 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [3r_16363066_16363389_-]; exon [3r_16363066_16363389_-]; intron [3r_16360576_16363065_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTTCGATGCCACCAACATTCTCAACAAGTTGCGCCAGAAGCACGCCCAGGGTGAGTGTCCAATATTATTTGTCCATACAAAGCCACCTTAACAATGAGTGAGTTTGAAATTTATATTTGAAAGGGGGGAAAATAGGTTTTTATTTTTAAGAACTTGTGTATGAAACTTTAAACAAAAAAACATTTGTTCCTCTGTAACAAGTTATAATCTATTTTTATTCATTTCGTCCAATTGTCTGTCTGATTACTTT
************************************************************************************************************************************************.....((((..((((....................))))..))))......******************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 SRR553488
RT_0-2 hours eggs
................................................................................................................................................TTTAAGAACTTGTGTATGAAACT................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0
.............AACATTCTCAACAAGTTGCGCCAGA.................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................TAAGAACTTGTGTATGAAACTTTAAACA............................................................................ 28 0 1 1.00 1 1 0 0 0 0 0
......................AACAAGTTGTGCCAGAAGACCG.............................................................................................................................................................................................................. 22 3 1 1.00 1 0 0 1 0 0 0
..............................................................................................................................................................................AAAAAACATTTGTTCCTCTGT....................................................... 21 0 1 1.00 1 0 0 0 1 0 0
................ATTCTCAACAAGTTGCGCCAG..................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
.........................AAGTTGCGCCAGAAGCACG.............................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0
...........................................GCCCAGGTTGAGTATCCA............................................................................................................................................................................................. 18 2 3 0.33 1 0 0 0 0 0 1
.....................CAACAAGTTGTGCCAGAAGAC................................................................................................................................................................................................................ 21 3 3 0.33 1 0 0 1 0 0 0
........................CAAGTTGCGCCCGAAG.................................................................................................................................................................................................................. 16 1 7 0.29 2 2 0 0 0 0 0
..............................................................................................................................................................................................................ATCAATTTTTATTAACTTCGTC...................... 22 3 4 0.25 1 0 0 0 1 0 0
....................TCAACGCGTTGCGCGAGAAG.................................................................................................................................................................................................................. 20 3 9 0.11 1 0 1 0 0 0 0
........................CAAGTTGCGCCCGAGGC................................................................................................................................................................................................................. 17 2 12 0.08 1 0 0 0 1 0 0
...................................................................................................................................................................................................................................CTGATTGTCTGTCTGATTGCT.. 21 3 14 0.07 1 0 0 1 0 0 0
.....................................AAGCACGCTCAGGGTT..................................................................................................................................................................................................... 16 2 20 0.05 1 1 0 0 0 0 0
.....................AAACAAGTTGCGCCA...................................................................................................................................................................................................................... 15 1 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

AAAGCTACGGTGGTTGTAAGAGTTGTTCAACGCGGTCTTCGTGCGGGTCCCACTCACAGGTTATAATAAACAGGTATGTTTCGGTGGAATTGTTACTCACTCAAACTTTAAATATAAACTTTCCCCCCTTTTATCCAAAAATAAAAATTCTTGAACACATACTTTGAAATTTGTTTTTTTGTAAACAAGGAGACATTGTTCAATATTAGATAAAAATAAGTAAAGCAGGTTAACAGACAGACTAATGAAA
*******************************************************.....((((..((((....................))))..))))......************************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 GSM343915
embryo
...............................................................................................................................................................................................................AGATAAAAATAAGTAAAGCAGGTTA.................. 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................ACACATACTTTGAAATTTGTTTTTT....................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.........................................................AGGTTTTTATAAACAGGTATGGT.......................................................................................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................GGGTCCCACTCGCAGGTTGTA......................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................ACCAGACAGACTAATG... 16 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................GGAATTGTTACTCACTC.................................................................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................ATGTTTCGGTGGAATTGTTACTCACT..................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................ACAGACAGACTAATGAA. 17 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................GGTCCCACTCACAGGTTATA......................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................ATTGAAGCAGGTTAACAGACAGACT....... 25 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
...........................................................................ATGTTTCGGTGGTCTGGTTACT......................................................................................................................................................... 22 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.....................................TTCGTGCGAGTCCCA...................................................................................................................................................................................................... 15 1 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0
...........................................................................ATGTTTCGGTGGTCTGGTTAC.......................................................................................................................................................... 21 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................ACAAGGAGACATGATTCAAG.............................................. 20 3 7 0.14 1 0 0 0 0 0 0 0 0 0 1 0
.....TCCGGTTGTTGTATGAGTTGT................................................................................................................................................................................................................................ 21 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0
...............GTAAGGATTGTTCAACGCAG....................................................................................................................................................................................................................... 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 1 0
.......................................................................AGGTATGTTTCGGGG.................................................................................................................................................................... 15 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TTTTTGTCTACAAGGAGA......................................................... 18 2 11 0.09 1 0 0 0 0 0 0 0 0 0 0 1
......................................TCGTGCGAGTCCCAAT.................................................................................................................................................................................................... 16 2 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................CAGGTATGTATCGATGG................................................................................................................................................................... 17 2 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0
...................................................................AAACAGGGATGTGTCGGC..................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................CTTTTTTTGTTAAGAAGGAG.......................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:16362866-16363115 - dsi_12040 TTTCGATGCCACCAACATTCTCAACAAGTTGCGCCAGAAGCACGCCCAGGGTGAGTGTCCAATATTATTTGTCCATACAAAGCCACC------TTAACA------------------------------ATG---------------------AGTGAGTTTGAAATTTA---------------------TATTT----------------------------------------------------------------------------GAAAGG-GG------------------------------------------------------------GGAAA------------------------------------------------------------ATAGGTTTTTATTTTTAAGA--------------ACTTGT----GTAT-----G---------------------------A-----------------------------------------AAC----------------------TTTAAACAAA---------------------------------------------------------------------------------------------AAAACATTTG---------------TTCCTCTGTAACAAG--------------------------------------------------------------------------------TTATAATCTAT-TTTTATTCATTTCGTCCA-----ATTGTCTGTC-TGATTACT-TT
droSec2 scaffold_0:17228241-17228489 - TTTCGATGCCACCAACATTCTCAACAAGTTGCGCCAGAAGCACGCCCAGGGTGAGTGTCCAATATTATTTGTCCATACAAAGCCACC------TTAACA------------------------------ATG---------------------AGTGAGTTTGAAATTTA---------------------TATTT----------------------------------------------------------------------------GAAAGG-GG------------------------------------------------------------AGAAG------------------------------------------------------------ATAAGTTTTTATTTTAAAGA--------------GCTTGT----GTAT-----G---------------------------A-----------------------------------------AAC----------------------TTTAAACAAA---------------------------------------------------------------------------------------------AAAACATTTG---------------TTCCTC-GTAACAAG--------------------------------------------------------------------------------TTAAAATCTAT-TTTTATTCACTTCGTCCA-----ATTGTCTGTC-TGATTACT-TT
dm3 chr3R:4629075-4629323 + TTTCGATGCCACCAACATTCTCAACAAGTTGCGCCAGAAGCACGCCCAGGGTGAGTGTCCAATGGTATTTGTCCATACAAAGCCACC------TTAACG------------------------------ATG---------------------AGTGAATTTGAAATTTA---------------------TATTT----------------------------------------------------------------------------GAAAGG-GG------------------------------------------------------------GAAGG------------------------------------------------------------ATAAGTTTTTATTTTAAAGA--------------ACTTGT----GTGT-----G---------------------------A-----------------------------------------AAC----------------------TTTAAACAA----------------------------------------------------------------------------------------------AAAACATTTG---------------TTCCTCT-TAACGAA--------------------------------------------------------------------------------TGATAATCCAT-TTTTATTCACTTCGTCCA-----ATTGTCTGTC-TGATTACTTTT
droEre2 scaffold_4770:16957069-16957318 - ATTCGATGCCACCAACATTCTCAATAAGTTACGCCAGAAGCACGCCCAGGGTGAGTGTCCAAAAATATTTTCCCATACAAAGCCACC------TTAATC------------------------------ATG---------------------AGTGAATTCGAGATTTA---------------------TATTT----------------------------------------------------------------------------GAAAGG-GG------------------------------------------------------------GGAA---------CG--------------------------------------------------ATAAATTTTTATTTTAAAGA--------------ACTTGT----GTAT-----G---------------------------A-----------------------------------------AAC----------------------TTGAACCAA----------------------------------------------------------------------------------------------AGAACATTTG---------------TTCTTATGTAACAAA--------------------------------------------------------------------------------TTGTAATCTAT-TTTGAATCACTTCGTCCA-----ATTAGCTGTC-CGTTTACT-TC
droYak3 3R:8690979-8691227 + TTTCGATGCCACCAACATTCTCAACAAGTTGCGCCAGAAGCACGCCCAGGGTGAGTGTCCCAAAATATTTACCCGTACAGAGCCACC------TTAACA------------------------------ATG---------------------AGTGAATTTGAAATTTA---------------------TATTT----------------------------------------------------------------------------GAAATGCG-------------------------------------------------------------GGGAA------------------------------------------------------------AGAGGTTTTTATTTTAAAGA--------------TCTTGT----GTAT-----G---------------------------A-----------------------------------------AAC----------------------TTTAAACAA----------------------------------------------------------------------------------------------AAAACATTTG---------------TTCCTCTGTAACAAA--------------------------------------------------------------------------------TTTTAATATAT-TCTTATTTCCTTCGTCCA-----ATTGTCTGTC-CGATTACT-TC
droEug1 scf7180000409490:93143-93403 - ATTCGATGCCACCAACATTCTCAACAAGCTGCGCCAGAAGCACGCCCAGGGTAAGTGTCCAAAAAC------------TAAATTATT------TTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------TTGAATTTTTAAGTTTAAAA--------------GTTTAT----TTACATCGTAAAATTATGATGGCT-----------------------------------------------------------------------------------------------------TAAAACCCAATCGTTTCTACGTAAAAATGTGT----CGCCAATCAATAGTGCC----------AAATCGGTATAGGAAAA-----ACGTTTA---------------ACTTTCT-----------------------------------------------------------------------------------------TAAAAGAATT-TTTTATTTACTTGGTCCACA-AAATGATCAATA-TGGTTATT-TC
droBia1 scf7180000302402:7341456-7341808 + TTTCGACGCCACCAACATTCTCAACAAGCTGCGCCAGAAGCACGCCCAGGGTAAGTTTCTCAAATTACTC----GTAAATTGACAAC------T-----TCTAGGCAATTCAGGGTTTTAAATTTATCAACA---------------------AATGAACTTTAAAACTT-TGAAT--GATTAA--------------------CAACTCATTTATTC-----------------AAAAGTATTTACAAATACTTTACACTATTTATTTCAAAAGATGTT-AGGGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTAAT----------------AGATAGTTGAACTTGACTTGAAAATATTTTTTATCAGCTCTAAACTGTTTTATATGACTT----------TTACGTCCATCAAAAGT-----------------------------------------------------------------CTAGGAAAATC---TTGTT--------------------------------------------------------------------------------------------------------------------------T-GTATATTCGGTTGGTCCACT-TGGTTGTCTGAC-TGCCTATT-TC
droTak1 scf7180000414009:192485-192544 - CTTCGATGCCACCAACATTCTCAACAAGCTGCGCCAGAAGCACGCCCAGGGTAAGTGTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491212:1166232-1166574 - CTTCGATGCCACCAACATTCTCAACAAGTTGCGCCAGAAACACGCCCAGGGTGAGTACTCCAAAATCGTTGAT----------CGCC------ATAATA------------------------------TTT---------------------ATTACTTTTGGGGTTTAACAAATTCTTATCGGAATTTACATATTAGCAAGAAACGCAATATTTTTGTCATTATTTGATACTTTACTC---------------------------------TAATG-GG------------------------------------------------------------TAAGC------------------------------------------------------------ACAG-----TGTTTCAAATA--------------ACTACTACAAATGT-----G---------------------------T-----------------------------------------ATCTTCAAACAGCTTTAGTTTGCAT----------TTTCGTTCATCAAATAT-------------------------------------------TACC-----------------TATAGGAAAACCGCACCATAAG---------------CACTT---------T--------------------------------------------------------------------------------TTACAATCCAT-TTTATTTCGCTTGGTACACA-ATATTGTTTTTC-TGGCTACT-TC
droRho1 scf7180000778307:26389-26634 - ATTCGATGCCACCAACATTCTCAACAAGCTGCGCCAGAAGCATGCCCAGGGTGAGTGCTCCAAAATCGTTCATCATTCGAGCCCACA------TTT-------------------------------------------------------------------------A---------------------TTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------TTAGGCCATTACACTTTTACGAC-----------AATTAT----GCAT--------------------------------------------------------------------------------------------------------------CTCCGTTCACCAAAAATCCACTCTTCACTATATA-----------------------------------------------TATAGGAAAACCAAACCATATG---------------CTCTTT-----------------------------------------------------------------------------------------TTACATTTTATTTTTATTTCACTTGGTCCATA-ACATTGTATTTC-TGGTTACT-TC
droFic1 scf7180000454106:2538745-2539100 - CTTTGACGCCACAAACATTCTCAACAAGTTGCGGCAAAAACACGCCCAGGGTAAGTCTCTAAAAATCTTTAACAACTTGAAGCCACC------TTAACA---------------GTTTTAAAA----AAACAAATTGGATCCGAAATAGTGTAGTTTCATTTAACATTT---AAATTCGTTTAAGGATTTATTTAGAAGCCAGTGAAGCCATTTCTTG-----------------AAAAGA-------------TAAAATTATTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAATTTATTGTTGCTTAATTGGATCCCTTATATCCAACCAGTTG---TTGCTTTAAACATATTTTTTA-------------------------------------------------------------------TTTA--------------------------------------------------------------------------------------------------------------------------TAAGTCTCC-TTCCATTGAAGT-----TTACTTTTATC-----------------------------A-ATTTATTCAGTTGGTATACA-TAGTTGTCTATT-CGGTTACT-TT
droKik1 scf7180000302247:262782-263068 - CTTCGATGCCACCAACATTCTCAACAAGCTCCGCCAGAAGCACGCCCAGGGTAAGTGTTTAAAACTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGGGG------------------------------------------------------------AA-----------CACCTTTAGCACTAAAGTTTTGGATTTAAGATATTAGCTTAGCTTTTCGTTGTCAGGCTC-----------TGACCATCATGAATGTCTTCCAAAAATCT-----C---------------------------T-----------------------------------------ACC----------------------TTTCAAGAAA---------------------------------------------------------------------------------------------AAAACCTTTACATATTCAGTAAACTTTCCTC-ACAGCAAGTGTTTAATTAACTTTGCACTCTTTAAAC----------------------------------ATT---------------TAGAAATCAAC-TT----------AAATTAGAAAA-------ATT-CACTTATT-TC
droAna3 scaffold_13340:11038192-11038447 + CTTTGATGCCACCAACATTCTCAACAAGCTACGCCAAAAGCATGCCCAGGGTGAGTAATCAGCTTCTTTAGTC--------------------------------------------------------AA--------------------------------------------------------------------------------------------------------------------------------------------------GTG-GTGGTTCGGGAGTCTCCATGACTCACTATTATTTTATTTCTAAAGCTACCAAAACTTAG-GGAAAAGAAGAAACATC--------------------------------------------------------------TATGGC--------------ACTTAC----ATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-GGACCTCTTT--GGAAAT-CCTCATTGAAACAAAACCACTT------C----------------------------TCTCAAATCCAATTTAATCATAAAGATCACTTTAT-TTTTCACT-TC
droBip1 scf7180000396374:44714-45011 - CTTTGATGCCACCAACATTCTCAACAAGCTGCGCCAGAAACATGCCCAGGGTGAGTAATCAAATCT----TTTCATACAACTG----GTAGCT------TTCAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCATGACTCACTTTTATTATATATCCAATGGGAGCATT-CT---A-TATA------------------------------------------------------------ATAG----------------GAACATAATGTA---------------------------------------------------------------------------------------------------------------------------------------------------TGGTTTCAGTGTAAAGATTTCAGTTAGTCCAATAAGAATTCCCTAGGATTGTTG------------------------------------------------------------------------AGACCTTCTG--GGAAAGC-----------------------------ACAAAGAAAACAAAGTCTCAAAATTTTAAGTTAAAACCAATTGAATCATT-AGATCACTTTTATTTCTCACT-TC
dp5 2:27284613-27284760 + CTTCGATGCCACCAACATTCTGAACAAGCTGCGCCAGAAGCACTCTCTTGGTGAGTACAGA-------------------------------------------------------------------------TCAGATGC-------------------------------------------------------------------AAT-TTATAGACAATATTTGGGGCTTTATAGTATTTAA----TCTTTAATCTGTTTATACAATGAAATGTG-GAGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACT-TT
droPer2 scaffold_6:2574852-2574999 + CTTCGATGCCACCAACATTCTGAACAAGCTGCGCCAGAAGCACTCTCTTGGTGAGTACAGA-------------------------------------------------------------------------TCAGATGC-------------------------------------------------------------------AAT-TTATAGACAATATTTGGGGCTTTATAGTATTTAA----TCTTTAATCTGTTTATACAATGAAATGTG-GAGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACT-TT
droWil2 scf2_1100000004902:4661350-4661488 - CTTCGATGCTACAAACATTCTAAATAAGTTGCGCCAGAAACATGCCCAAGGTGAGTCCCCCCCATC---------------------------TTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATATTTTCTTATATTTGACTTCTTTAAGTCACT-CTTTATTGAAAACATATTCA-------------------------------------T-TTTTTAACACT---------------------------------T
droVir3 scaffold_13047:1848209-1848265 - GTTCGATGCGACCAACATTCTCAACAAGCTGCGCCAGAAGCATGCCCAAGGTAAGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:3775663-3775719 - CTTCGATGCCACCAACATTCTCAACAAGTTGCGCCAGAAACATGCCCAAGGTGAGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14906:8681791-8681845 - CTTCGATGCCACCAACATTCTCAACAAGCTGCGCCAGAAGCATGCCCAAGGTGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTTCGATGCCACCAACATTCTCAACAAGTTGCGCCAGAAGCACGCCCAGGGTGAGTGTCCAATATTATTTGTCCATACAAAGCCACC------TTAACA------------------------------ATG---------------------AGTGAGTTTGAAATTTA---------------------TATTT----------------------------------------------------------------------------GAAAGG-GG------------------------------------------------------------GGAAA------------------------------------------------------------ATAGGTTTTTATTTTTAAGA--------------ACTTGT----GTAT-----G---------------------------A-----------------------------------------AAC----------------------TTTAAACAAA---------------------------------------------------------------------------------------------AAAACATTTG---------------TTCCTCTGTAACAAG--------------------------------------------------------------------------------TTATAATCTAT-TTTTATTCATTTCGTCCA-----ATTGTCTGTC-TGATTACT-TTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAAGA--------------ACTTGT----GTAT-----G---------------------------A-----------------------------------------AAC----------------------T.......................................................................................................................................................................................................................................................................................2311.00100100000000000000
.............AACATTCTCAACAAGTTGCGCCAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGA--------------ACTTGT----GTAT-----G---------------------------A-----------------------------------------AAC----------------------TTTAAACA................................................................................................................................................................................................................................................................................2811.00100000000100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------------------------------------------------------------------------------------AAAACATTTG---------------TTCCTCTGT...............................................................................................................................................2111.00100000001000000000
................ATTCTCAACAAGTTGCGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
.........................AAGTTGCGCCAGAAGCACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
droSec2
TTTCGATGCCACCAACATTCTCAACAAGTTGCGCCAGAAGCACGCCCAGGGTGAGTGTCCAATATTATTTGTCCATACAAAGCCACC------TTAACA------------------------------ATG---------------------AGTGAGTTTGAAATTTA---------------------TATTT----------------------------------------------------------------------------GAAAGG-GG------------------------------------------------------------AGAAG------------------------------------------------------------ATAAGTTTTTATTTTAAAGA--------------GCTTGT----GTAT-----G---------------------------A-----------------------------------------AAC----------------------TTTAAACAAA---------------------------------------------------------------------------------------------AAAACATTTG---------------TTCCTC-GTAACAAG--------------------------------------------------------------------------------TTAAAATCTAT-TTTTATTCACTTCGTCCA-----ATTGTCTGTC-TGATTACT-TTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................TGCGCCAGAAGCACGCCCAGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGT----GTAT-----G---------------------------A-----------------------------------------AAC----------------------TTTAAAC.................................................................................................................................................................................................................................................................................2211.0010010
..................................CAGAAGCACGCCCAGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
........................CAAGTTGCGCCAGAAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.....................CAACAAGTTGCGCCAGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...................CTCAACAAGTTGCGCCAGAAGCACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
dm3
TTTCGATGCCACCAACATTCTCAACAAGTTGCGCCAGAAGCACGCCCAGGGTGAGTGTCCAATGGTATTTGTCCATACAAAGCCACC------TTAACG------------------------------ATG---------------------AGTGAATTTGAAATTTA---------------------TATTT----------------------------------------------------------------------------GAAAGG-GG------------------------------------------------------------GAAGG------------------------------------------------------------ATAAGTTTTTATTTTAAAGA--------------ACTTGT----GTGT-----G---------------------------A-----------------------------------------AAC----------------------TTTAAACAA----------------------------------------------------------------------------------------------AAAACATTTG---------------TTCCTCT-TAACGAA--------------------------------------------------------------------------------TGATAATCCAT-TTTTATTCACTTCGTCCA-----ATTGTCTGTC-TGATTACTTTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGA--------------ACTTGT----GTGT-----G---------------------------A-----------------------------------------AAC----------------------........................................................................................................................................................................................................................................................................................21116.001600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001500000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.TTCGATGCCACCAACATTCTCAACAAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2816.0060000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010101100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG---------------TTCCTCT-TAACGAA--------------------------------------------------------------------------------TGAT.....................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AACAAGTTGCGCCAGAAGCACGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AAGTTGCGCCAGAAGCACGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AACAAGTTGCGCCAGAAGCACGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AGAAGCACGCCCAGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................AAAGCCACC------TTAACG------------------------------ATG---------------------AGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
.........................................................................CATACAAAGCCACC------TTAACG------------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000
..........................................CGCCCAGGGTGAGTGTCCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
TTTCGATGCCACCAACATTCTCAACAAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GCACGCCCAGGGTGAGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.........................................................................CATACAAAGCCACC------TTAACG------------------------------ATG---------------------AGTGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000
.................TTCTCAACAAGTTGCGCCAGAAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................ATTT----------------------------------------------------------------------------GAAAGG-GG------------------------------------------------------------GAAGG------------------------------------------------------------A...........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.................TTCTCAACAAGTTGCGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..............................................CAGGGTGAGTGTCCAATGGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CAACAAGTTGCGCCAGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................TGCGCCAGAAGCACGCCCAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CACCAACATTCTCAACAAGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................ATACAAAGCCACC------TTAACG------------------------------ATG---------------------AG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................TCTCAACAAGTTGCGCCAGAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................T----------------------------------------------------------------------------GAAAGG-GG------------------------------------------------------------GAAGG------------------------------------------------------------ATAAGGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACTTCGTCCA-----ATTGTCTGT.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGCCACCAACATTCTCAACAAGTTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CAGGGTGAGTGTCCAATGGTATTTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CAACAAGTTGCGCCAGAAGCACGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................TT----------------------------------------------------------------------------GAAAGG-GG------------------------------------------------------------GAAGG------------------------------------------------------------ATAAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................CCAGGGTGAGTGTCCAATGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................CCAGAAGCACGCCCAGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...........................GTTGCGCCAGAAGCACGCCCAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TCGATGCCACCAACATTCTCAACAAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..........................................................................ATACAAAGCCACC------TTAACG------------------------------ATG---------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
TTTCGATGCCACCAACATTCTCAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TCAACAAGTTGCGCCAGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TTATTTTAAAGA--------------ACTTGT----GTG.............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CAGAAGCACGCCCAGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
................................................................................................................................................................................................................................................................................GAAAGG-GG------------------------------------------------------------GAAGG------------------------------------------------------------ATAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
....GATGCCACCAACATTCTCAACAAGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AGCACGCCCAGGGTGAGTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TACAAAGCCACC------TTAACG------------------------------ATG---------------------AGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................CATACAAAGCCACC------TTAACG------------------------------ATG---------------------AGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................AACAAGTTGCGCCAGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.....................CAACAAGTTGCGCCAGAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................TCTCAACAAGTTGCGCCAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...............................CGCCAGAAGCACGCCCAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TCAACAAGTTGCGCCAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................TTCTCAACAAGTTGCGCCAGAAGCACGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CTCAACAAGTTGCGCCAGAAGCACGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GCCAGAAGCACGCCCAGGGTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.TTCGATGCCACCAACATTCTCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GTTGCGCCAGAAGCACGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................GTTGCGCCAGAAGCACGCCCAGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AACATTCTCAACAAGTTGCGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AGAAGCACGCCCAGGGTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................AACAAGTTGCGCCAGAAGCACGCCCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGA--------------ACTTGT----GTGT-----G---------------------------A-----------------------------------------AAC----------------------T.......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
....................................GAAGCACGCCCAGGGTGAGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAT-TTTTATTCACTTCGTC.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
............................TTGCGCCAGAAGCACGCCCAGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
...............CATTCTCAACAAGTTGCGCCAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTAAAGA--------------ACTTGT----GTGT-----G---------------------------A-----------------------------------------AAC----------------------........................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................T----------------------------------------------------------------------------GAAAGG-GG------------------------------------------------------------GAAGG------------------------------------------------------------ATAAGGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATTCGATGCCACCAACATTCTCAATAAGTTACGCCAGAAGCACGCCCAGGGTGAGTGTCCAAAAATATTTTCCCATACAAAGCCACC------TTAATC------------------------------ATG---------------------AGTGAATTCGAGATTTA---------------------TATTT----------------------------------------------------------------------------GAAAGG-GG------------------------------------------------------------GGAA---------CG--------------------------------------------------ATAAATTTTTATTTTAAAGA--------------ACTTGT----GTAT-----G---------------------------A-----------------------------------------AAC----------------------TTGAACCAA----------------------------------------------------------------------------------------------AGAACATTTG---------------TTCTTATGTAACAAA--------------------------------------------------------------------------------TTGTAATCTAT-TTTGAATCACTTCGTCCA-----ATTAGCTGTC-CGTTTACT-TCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................TCAATAAGTTACGCCAGAAGCACGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26110.001000000010
droYak3
TTTCGATGCCACCAACATTCTCAACAAGTTGCGCCAGAAGCACGCCCAGGGTGAGTGTCCCAAAATATTTACCCGTACAGAGCCACC------TTAACA------------------------------ATG---------------------AGTGAATTTGAAATTTA---------------------TATTT----------------------------------------------------------------------------GAAATGCG-------------------------------------------------------------GGGAA------------------------------------------------------------AGAGGTTTTTATTTTAAAGA--------------TCTTGT----GTAT-----G---------------------------A-----------------------------------------AAC----------------------TTTAAACAA----------------------------------------------------------------------------------------------AAAACATTTG---------------TTCCTCTGTAACAAA--------------------------------------------------------------------------------TTTTAATATAT-TCTTATTTCCTTCGTCCA-----ATTGTCTGTC-CGATTACT-TCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................AAGTTGCGCCAGAAGCACGCCCAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25112.0012000000000012
................ATTCTCAACAAGTTGCGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000
.....................CAACAAGTTGCGCCAGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.....................CAACAAGTTGCGCCAGAAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..................TCTCAACAAGTTGCGCCAGAAGCAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
droEug1
ATTCGATGCCACCAACATTCTCAACAAGCTGCGCCAGAAGCACGCCCAGGGTAAGTGTCCAAAAAC------------TAAATTATT------TTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------TTGAATTTTTAAGTTTAAAA--------------GTTTAT----TTACATCGTAAAATTATGATGGCT-----------------------------------------------------------------------------------------------------TAAAACCCAATCGTTTCTACGTAAAAATGTGT----CGCCAATCAATAGTGCC----------AAATCGGTATAGGAAAA-----ACGTTTA---------------ACTTTCT-----------------------------------------------------------------------------------------TAAAAGAATT-TTTTATTTACTTGGTCCACA-AAATGATCAATA-TGGTTATT-TCSizeHit CountTotal NormTotal
No Reads
droBia1
TTTCGACGCCACCAACATTCTCAACAAGCTGCGCCAGAAGCACGCCCAGGGTAAGTTTCTCAAATTACTC----GTAAATTGACAAC------T-----TCTAGGCAATTCAGGGTTTTAAATTTATCAACA---------------------AATGAACTTTAAAACTT-TGAAT--GATTAA--------------------CAACTCATTTATTC-----------------AAAAGTATTTACAAATACTTTACACTATTTATTTCAAAAGATGTT-AGGGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTAAT----------------AGATAGTTGAACTTGACTTGAAAATATTTTTTATCAGCTCTAAACTGTTTTATATGACTT----------TTACGTCCATCAAAAGT-----------------------------------------------------------------CTAGGAAAATC---TTGTT--------------------------------------------------------------------------------------------------------------------------T-GTATATTCGGTTGGTCCACT-TGGTTGTCTGAC-TGCCTATT-TCSizeHit CountTotal NormTotal
No Reads
droTak1
CTTCGATGCCACCAACATTCTCAACAAGCTGCGCCAGAAGCACGCCCAGGGTAAGTGTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CTTCGATGCCACCAACATTCTCAACAAGTTGCGCCAGAAACACGCCCAGGGTGAGTACTCCAAAATCGTTGAT----------CGCC------ATAATA------------------------------TTT---------------------ATTACTTTTGGGGTTTAACAAATTCTTATCGGAATTTACATATTAGCAAGAAACGCAATATTTTTGTCATTATTTGATACTTTACTC---------------------------------TAATG-GG------------------------------------------------------------TAAGC------------------------------------------------------------ACAG-----TGTTTCAAATA--------------ACTACTACAAATGT-----G---------------------------T-----------------------------------------ATCTTCAAACAGCTTTAGTTTGCAT----------TTTCGTTCATCAAATAT-------------------------------------------TACC-----------------TATAGGAAAACCGCACCATAAG---------------CACTT---------T--------------------------------------------------------------------------------TTACAATCCAT-TTTATTTCGCTTGGTACACA-ATATTGTTTTTC-TGGCTACT-TCSizeHit CountTotal NormTotal
No Reads
droRho1
ATTCGATGCCACCAACATTCTCAACAAGCTGCGCCAGAAGCATGCCCAGGGTGAGTGCTCCAAAATCGTTCATCATTCGAGCCCACA------TTT-------------------------------------------------------------------------A---------------------TTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------TTAGGCCATTACACTTTTACGAC-----------AATTAT----GCAT--------------------------------------------------------------------------------------------------------------CTCCGTTCACCAAAAATCCACTCTTCACTATATA-----------------------------------------------TATAGGAAAACCAAACCATATG---------------CTCTTT-----------------------------------------------------------------------------------------TTACATTTTATTTTTATTTCACTTGGTCCATA-ACATTGTATTTC-TGGTTACT-TCSizeHit CountTotal NormTotal
No Reads
droFic1
CTTTGACGCCACAAACATTCTCAACAAGTTGCGGCAAAAACACGCCCAGGGTAAGTCTCTAAAAATCTTTAACAACTTGAAGCCACC------TTAACA---------------GTTTTAAAA----AAACAAATTGGATCCGAAATAGTGTAGTTTCATTTAACATTT---AAATTCGTTTAAGGATTTATTTAGAAGCCAGTGAAGCCATTTCTTG-----------------AAAAGA-------------TAAAATTATTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAATTTATTGTTGCTTAATTGGATCCCTTATATCCAACCAGTTG---TTGCTTTAAACATATTTTTTA-------------------------------------------------------------------TTTA--------------------------------------------------------------------------------------------------------------------------TAAGTCTCC-TTCCATTGAAGT-----TTACTTTTATC-----------------------------A-ATTTATTCAGTTGGTATACA-TAGTTGTCTATT-CGGTTACT-TTSizeHit CountTotal NormTotal
No Reads
droKik1
CTTCGATGCCACCAACATTCTCAACAAGCTCCGCCAGAAGCACGCCCAGGGTAAGTGTTTAAAACTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGGGG------------------------------------------------------------AA-----------CACCTTTAGCACTAAAGTTTTGGATTTAAGATATTAGCTTAGCTTTTCGTTGTCAGGCTC-----------TGACCATCATGAATGTCTTCCAAAAATCT-----C---------------------------T-----------------------------------------ACC----------------------TTTCAAGAAA---------------------------------------------------------------------------------------------AAAACCTTTACATATTCAGTAAACTTTCCTC-ACAGCAAGTGTTTAATTAACTTTGCACTCTTTAAAC----------------------------------ATT---------------TAGAAATCAAC-TT----------AAATTAGAAAA-------ATT-CACTTATT-TCSizeHit CountTotal NormTotal
No Reads
droAna3
CTTTGATGCCACCAACATTCTCAACAAGCTACGCCAAAAGCATGCCCAGGGTGAGTAATCAGCTTCTTTAGTC--------------------------------------------------------AA--------------------------------------------------------------------------------------------------------------------------------------------------GTG-GTGGTTCGGGAGTCTCCATGACTCACTATTATTTTATTTCTAAAGCTACCAAAACTTAG-GGAAAAGAAGAAACATC--------------------------------------------------------------TATGGC--------------ACTTAC----ATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-GGACCTCTTT--GGAAAT-CCTCATTGAAACAAAACCACTT------C----------------------------TCTCAAATCCAATTTAATCATAAAGATCACTTTAT-TTTTCACT-TCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............ACATTCTCAACAAGCTACGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501010000
.........................AAGCTACGCCAAAAGCATGCCCAGGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.501010000
...............CATTCTCAACAAGCTACGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501010000
...........................GCTACGCCAAAAGCATGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501010000
droBip1
CTTTGATGCCACCAACATTCTCAACAAGCTGCGCCAGAAACATGCCCAGGGTGAGTAATCAAATCT----TTTCATACAACTG----GTAGCT------TTCAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCATGACTCACTTTTATTATATATCCAATGGGAGCATT-CT---A-TATA------------------------------------------------------------ATAG----------------GAACATAATGTA---------------------------------------------------------------------------------------------------------------------------------------------------TGGTTTCAGTGTAAAGATTTCAGTTAGTCCAATAAGAATTCCCTAGGATTGTTG------------------------------------------------------------------------AGACCTTCTG--GGAAAGC-----------------------------ACAAAGAAAACAAAGTCTCAAAATTTTAAGTTAAAACCAATTGAATCATT-AGATCACTTTTATTTCTCACT-TCSizeHit CountTotal NormTotal
No Reads
dp5
CTTCGATGCCACCAACATTCTGAACAAGCTGCGCCAGAAGCACTCTCTTGGTGAGTACAGA-------------------------------------------------------------------------TCAGATGC-------------------------------------------------------------------AAT-TTATAGACAATATTTGGGGCTTTATAGTATTTAA----TCTTTAATCTGTTTATACAATGAAATGTG-GAGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACT-TTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................ATTCTGAACAAGCTGCGCCAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...................CTGAACAAGCTGCGCCAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000000
........CCACCAACATTCTGAACAAGCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..........ACCAACATTCTGAACAAGCTGCGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
droPer2
CTTCGATGCCACCAACATTCTGAACAAGCTGCGCCAGAAGCACTCTCTTGGTGAGTACAGA-------------------------------------------------------------------------TCAGATGC-------------------------------------------------------------------AAT-TTATAGACAATATTTGGGGCTTTATAGTATTTAA----TCTTTAATCTGTTTATACAATGAAATGTG-GAGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACT-TTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................CTGAACAAGCTGCGCCAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.004400000
.....................GAACAAGCTGCGCCAGAAGCACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003300000
.....................GAACAAGCTGCGCCAGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003300000
.........CACCAACATTCTGAACAAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003300000
.........CACCAACATTCTGAACAAGCTGCGCCAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2913.003300000
................ATTCTGAACAAGCTGCGCCAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
...............CATTCTGAACAAGCTGCGCCAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002200000
.........CACCAACATTCTGAACAAGCTGCGCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
....................TGAACAAGCTGCGCCAGAAGCACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
.....................GAACAAGCTGCGCCAGAAGCACTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
............CAACATTCTGAACAAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
........CCACCAACATTCTGAACAAGCTGCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
......TGCCACCAACATTCTGAACAAGCTGCGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
.........CACCAACATTCTGAACAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
............CAACATTCTGAACAAGCTGCGCCAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
droWil2
CTTCGATGCTACAAACATTCTAAATAAGTTGCGCCAGAAACATGCCCAAGGTGAGTCCCCCCCATC---------------------------TTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGATATTTTCTTATATTTGACTTCTTTAAGTCACT-CTTTATTGAAAACATATTCA-------------------------------------T-TTTTTAACACT---------------------------------TSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................ATTCTAAATAAGTTGCGCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200110
................ATTCTAAATAAGTTGCGCCAGAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
........CTACAAACATTCTAAATAAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
....................TAAATAAGTTGCGCCAGAAACATGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.................TTCTAAATAAGTTGCGCCAGAAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
...........CAAACATTCTAAATAAGTTGCGCCAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
................ATTCTAAATAAGTTGCGCCAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
................................GCCAGAAACATGCCCAAGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...............CATTCTAAATAAGTTGCGCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.........................AAGTTGCGCCAGAAACATGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
droVir3
GTTCGATGCGACCAACATTCTCAACAAGCTGCGCCAGAAGCATGCCCAAGGTAAGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............AACATTCTCAACAAGCTGCGCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000010000000000000000000000000000000000000000000000000000001000
......................AACAAGCTGCGCCAGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000010000010000000000000000000000000000000000000000000000000
......TGCGACCAACATTCTCAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000010000000000000000000000000000000000000
..........ACCAACATTCTCAACAAGCTGCGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
..TCGATGCGACCAACATTCTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
GTTCGATGCGACCAACATTCTCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000010000000000000000000000000
droMoj3
CTTCGATGCCACCAACATTCTCAACAAGTTGCGCCAGAAACATGCCCAAGGTGAGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................ATTCTCAACAAGTTGCGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
CTTCGATGCCACCAACATTCTCAACAAGCTGCGCCAGAAGCATGCCCAAGGTGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 12:39 AM