ID:

dsi_11964

 Coordinate:

3r:10049376-10049525 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.5 -3.1 -3.1

Flybase annnotation

three_prime_UTR [3r_10049423_10049877_-]; exon [3r_10049423_10052119_-]; Antisense to three_prime_UTR [3r_10049086_10049636_+]; Antisense to exon [3r_10048783_10049636_+]

No Repeatable elements found

Sense Strand Reads

#########################################################################################################################################################-------------------------------------------------------------------------------------------------
TAAAACTAAATAATGATCGAACAATTACAAGACGACTTACATAATTTAACTAAACGCTAGAACTAAGGACTACATGAAATACTTCAAAGAATAGTGACAATTGGCACCATTGTAAGATAATTCAATTCCATTAAAGATTCATGATTTTAAAATAATAATACCGCAAATTACATAGGTTTATATATAACACATATAAACAGATCGGGCTGCTCGAACATGGGAATAGCTGAAAAACTTTGGCAGAATGCGA
**************************************************.....(((((........((((..((((....)))).....)))).....)))))..*********************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M023
head
 M025
embryo
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 O002
Head
 SRR902009
testis
 O001
Testis
 M053
female body
 GSM343915
embryo
..................................................TAAACGCTAGAACTAAGGACT................................................................................................................................................................................... 21 0 1 79.00 79 23 20 4 0 10 10 7 5 0 0 0 0 0 0
..................................................TAAACTCTAGAACTAAGGACT................................................................................................................................................................................... 21 1 1 38.00 38 3 11 15 9 0 0 0 0 0 0 0 0 0 0
.........................................................TAGAACTAAGGACTACATGAA............................................................................................................................................................................ 21 0 1 20.00 20 4 4 8 4 0 0 0 0 0 0 0 0 0 0
................TCGAACAATTACAAGACGACT..................................................................................................................................................................................................................... 21 0 1 13.00 13 0 0 0 0 3 8 1 0 1 0 0 0 0 0
...........................CAAGACGACTTACATAATTTA.......................................................................................................................................................................................................... 21 0 1 11.00 11 1 0 1 1 0 0 0 0 5 0 3 0 0 0
.....................................................................CTACATGAAATACTTCAAAGA................................................................................................................................................................ 21 0 1 10.00 10 0 2 3 5 0 0 0 0 0 0 0 0 0 0
......................................................................................AAGAATAGTGACAATTGGCAC............................................................................................................................................... 21 0 1 8.00 8 0 0 0 0 5 1 2 0 0 0 0 0 0 0
...................................................AAACTCTAGAACTAAGGACTA.................................................................................................................................................................................. 21 1 1 8.00 8 1 0 3 4 0 0 0 0 0 0 0 0 0 0
..................................................TAAACGCTAGAACTAAGGAC.................................................................................................................................................................................... 20 0 1 8.00 8 4 0 1 0 2 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................TAAACAGATCGGGCTGCTCGA.................................... 21 0 1 7.00 7 5 2 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TAGAACTAAGGACTACATGAAA........................................................................................................................................................................... 22 0 1 5.00 5 0 1 4 0 0 0 0 0 0 0 0 0 0 0
............................................................................AAATACTTCAAAGAATAGTGA......................................................................................................................................................... 21 0 1 5.00 5 1 1 2 0 0 0 0 1 0 0 0 0 0 0
..........................................................AGAACTAAGGACTACATGAA............................................................................................................................................................................ 20 0 1 5.00 5 1 3 0 0 0 0 0 0 0 1 0 0 0 0
..............................................TAACTAAACGCTAGAACTAAG....................................................................................................................................................................................... 21 0 1 5.00 5 1 2 1 1 0 0 0 0 0 0 0 0 0 0
.........................TACAAGACGACTTACATAATT............................................................................................................................................................................................................ 21 0 1 5.00 5 2 0 2 0 0 0 0 0 0 0 1 0 0 0
..............................................................CTAAGGACTACATGAAATACT....................................................................................................................................................................... 21 0 1 4.00 4 1 1 0 1 0 1 0 0 0 0 0 0 0 0
.............................AGACGACTTACATAATTTAACT....................................................................................................................................................................................................... 22 0 1 4.00 4 2 1 1 0 0 0 0 0 0 0 0 0 0 0
..AAACTAAATAATGATCGAACA................................................................................................................................................................................................................................... 21 0 1 4.00 4 0 2 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TAAACAGATCGGGCTGCTCGAA................................... 22 0 1 4.00 4 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................CACATATAAACAGATCGGGCT.......................................... 21 0 1 3.00 3 2 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................ACAAGACGACTTACATAATTT........................................................................................................................................................................................................... 21 0 1 3.00 3 1 0 0 1 0 0 0 0 1 0 0 0 0 0
....................................................................................CAAAGAATAGTGACAATTGGC................................................................................................................................................. 21 0 1 3.00 3 0 0 0 0 0 0 0 1 0 0 0 0 2 0
.................CGAACAATTACAAGACGACTT.................................................................................................................................................................................................................... 21 0 1 3.00 3 0 0 0 0 0 0 0 0 1 0 2 0 0 0
..................................................................................................TTGTGGCACCATTGTAAGATA................................................................................................................................... 21 3 2 2.50 5 3 1 1 0 0 0 0 0 0 0 0 0 0 0
......TAAATAATGATCGAACAAT................................................................................................................................................................................................................................. 19 0 1 2.00 2 0 0 0 1 0 0 0 1 0 0 0 0 0 0
................................................................AAGGACTACATGAAATACTTCA.................................................................................................................................................................... 22 0 1 2.00 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................ATATAAACGGATCGGGCTGCT....................................... 21 1 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0
........................TTACAAGACGACTTACATAAT............................................................................................................................................................................................................. 21 0 1 2.00 2 0 0 0 0 0 0 0 0 1 1 0 0 0 0
.............................................................................................................................................................................................CATATAAACAGATCGGGCTGC........................................ 21 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................ATTAAAGATTCATGATTTTAA.................................................................................................... 21 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
...........................CAAGACGACTTACATAATTT........................................................................................................................................................................................................... 20 0 1 2.00 2 0 0 1 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................CCATTAAAGATTCATGATTTT...................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................AAGGACTACATGAAATACT....................................................................................................................................................................... 19 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TGAAAAACTTTGGCAGAATGC.. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TATAAACAGATCGGGCTGCT....................................... 20 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
........................TTACAAGACGACTTACATAATT............................................................................................................................................................................................................ 22 0 1 2.00 2 0 1 0 0 0 0 0 0 1 0 0 0 0 0
......TAAATAATGATCGAACAATTA............................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0
.................................................CTAAACGCTAGAACTAAGG...................................................................................................................................................................................... 19 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................AAACGCTAGAACTAAGGACT................................................................................................................................................................................... 20 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
..................GAACAATTACAAGACGACTTA................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0
............................................TTTAACTAAACGCTAGAACT.......................................................................................................................................................................................... 20 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0
...............................................AACTAAACTCTAGAACTAAGG...................................................................................................................................................................................... 21 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
..................................................TAAACGCTAGAACTAAGGA..................................................................................................................................................................................... 19 0 1 2.00 2 0 1 0 0 0 0 0 0 0 1 0 0 0 0
..................................................TAAACGCTAGAACTAAGGACTAC................................................................................................................................................................................. 23 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 1 0 0
......................................................................TACATGAAATACTTCAAAGAA............................................................................................................................................................... 21 0 1 2.00 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................TAAACTCTAGAACTAAGGAC.................................................................................................................................................................................... 20 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CGAACTTGGGGATAGCTG..................... 18 2 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0
............ATGATCGAACAATTACAAGAC......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
TAAAACTAAATAATGATCGA...................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................GCACCATTGTAAGATAATTCA.............................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CATTAAAGATTCATGATTTTA..................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................AGACGACTGACATACTTTGACT....................................................................................................................................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................CTAAACGCTAGAACTAAGGACT................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAAACGCTAGAACTAAGGACA................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TAAGGACTACATGAAATAC........................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................TCGAACATGGAAATAGCTGAAAAAGTT............. 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................AACGCTAGAACTAAGGACTAC................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................TTCAAAGAATAGTGACAATTGA.................................................................................................................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...AACTAAATAATGATCGAACAA.................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................AACTAAACGCTAGAACTAAGG...................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................CACATATAAACAGATCGGGCTGCTCGA.................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................ATTTAACTAAACGCTAGAACT.......................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................CTTCAAAGAATAGTGACAATT.................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................AACGCTAGAACTAAGGACT................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................ATTACAAGACGACTTACATAA.............................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................TCGGGCTGCTCGAACATGGGA............................ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................GTGGCACCATTGTAAGATAATT................................................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................TAACTAAACTCTAGAACTAAG....................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................ATGGGAATAGCTGAAAAACTT............. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................AAACGCTAGAACTAAGGACTA.................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TAACACATATAAACAGATCGGGCTGC........................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................CTAGAACTAAGGACTACATGAA............................................................................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................TCGAACAATTACAAGACGACC..................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................GAACTAAGGACTACATGAAA........................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGCTCGAACATGGGAATAGC....................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................ACTAAACGCTAGAACTAAG....................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............TGATCGAACAATTACAAGACGA....................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TCCATTAAAGATTCATGATTT....................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..AAACTAAATAATGACCGAACA................................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAAACGCTAGAACTTAGGACT................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................AACGCTAGAACTAAGGACTA.................................................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................TTAAGGACTACATGGAATACT....................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................TTTAACTAAACGCTAGAACTAAGGA..................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.......AAATAATGATCGAACAATT................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................TGTGGCACCATTGTAAGAT.................................................................................................................................... 19 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AATAGTGACAATTGGCACCA............................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................ATCGGGCTGCTCGAACATGGG............................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................TAAACGCTAGAACTAAGGACC................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................TGTGGCACCATTGTAAGATAAT................................................................................................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................ATAAACAGATCGGGCTGCTCG..................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................TTCATGATTTTAAAATAAA.............................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................CTAGAACTAAGGACTACATGA............................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................CATAATTTAACTAAACTCTAG.............................................................................................................................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................TAAACGCTAGAGCTAAGGACT................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....CTAAATAATGATCGAAC.................................................................................................................................................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........AATGATCGAACAATTACAAGA.......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................ATTCCATTAAAGATTCATGATT........................................................................................................ 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................AAGATAATTCAATTCCATTA..................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................TAACACATATAAACAGATCGGG............................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATAGCTGAAAAACTTTGG.......... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................ACTAAACGCTAGAACTAAGGG..................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................AAACAGATCGGGCTGCTCGAAC.................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................AACGCTAGAACTAAGGACTACATGA............................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................TTTAACTAAACTCTAGAACTAAG....................................................................................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAAACTCTAGAACTAAGGACTA.................................................................................................................................................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................TAAAATCTAGAACTAAGGACT................................................................................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTAAACGCTAGAACTAAGGAC.................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.................................................CTAAACTCTAGAACTAAGGAC.................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................ATGAAATACTTCAAAGAATAG............................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................ACATAAACAGATCGGGCTGCTT...................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................................................TGAAAAACTTTGGCAAAATGC.. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................GTGGCACCATTGTAAGATAAT................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CATTAAAGATTCATGATT........................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................TAACTAAACGCTAGAACTAAGGA..................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
................................................ACTAAACTCTAGAACTAAGG...................................................................................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................CTAGAACTAAGGACTACATGAAATAC........................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................TAATTTAACTAAACTCTAGAA............................................................................................................................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................TACATAATTTAACTAAACGCT................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................AAACAGATCGGGCTGCTCGAA................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................TCTAGAACTAAGGACTACAT............................................................................................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................AAGAATAGTGACAATTGGC................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................GACAATTGGCACCATTGTA........................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................................................ACACATATAAACAGATCGGGC........................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................TTAACTAAACGCTAGAACTAAGG...................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................TTAACTAAACTCTAGAACTAAG....................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................AAGACGACTTACATAATTTAT......................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................................TAAACGCTAGAACTGGGGACT................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............TGATCAAACAATTACAAGACGA....................................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGGGAATAGCTGAAAAACTTTG........... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................TAGAACTAAGGACTACATGA............................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................TATAAACAGATCCGGCTGCTC...................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGTAAGATAATTCAATTCCA........................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................................TAACTAAACGCTAGAACTAAGG...................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................TACAAGACGACTTACATAATTT........................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................AAAGAATAGTGACAATTGGC................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................ATTTAACTAAACTCTAGAACT.......................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................AAGATAATTCAATTCCATTAA.................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................GTGACAATTGGCACCATT........................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................CTCTAGAACTAAGGACTACAT............................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TACTTCAAAGAATAGTGACAATTGTGG................................................................................................................................................ 27 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TTGTGGCACCATTGTAAGATAA.................................................................................................................................. 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................TCTAGAACTAAGGACTACATG.............................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...AACTAAATAATGATCGAACAAT................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................TAGTGACAATTGGCACCATTG.......................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................TTACATAATTTAACTAAACGCT................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................GAACTAAGGACTACATGAAAT.......................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................TCTAGAACTAAGGACTACATGAAA........................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................AATTTAACTAAACGCTAGAAC........................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
....................................................................................CAAAGAATAGTGACAATTGTGGC............................................................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................AACAGATCGGGCTGCTCGAAC.................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................CCATTAAAGCTTCATGATTTT...................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
................................................................AAGGACTATATGAAATACTTC..................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................AAAGAATAGTGACAATTGTGG................................................................................................................................................ 21 3 11 0.55 6 1 3 2 0 0 0 0 0 0 0 0 0 0 0
....................................................................................CAAAGAATAGTGACAATTGTG................................................................................................................................................. 21 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................AAAGAATAGTGACAATTGTG................................................................................................................................................. 20 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................AAGAATAGTGACAATTGTGGC............................................................................................................................................... 21 3 6 0.33 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TTGTGGCACCATTGTAAGAT.................................................................................................................................... 20 3 10 0.30 3 2 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TGAGGCACCATTGTAAGATA................................................................................................................................... 20 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TCGGAATAGCTGAAA.................. 15 1 12 0.17 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TTTGGCAGCATTGTAAGA..................................................................................................................................... 18 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................AAGAATAGTGACAATTGTGG................................................................................................................................................ 20 3 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................ATTGACGATTCATGATTTC...................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TATCGGAATAGCTGAAA.................. 17 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

##########################################################################################################################################################################################################################################################
ATTTTGATTTATTACTAGCTTGTTAATGTTCTGCTGAATGTATTAAATTGATTTGCGATCTTGATTCCTGATGTACTTTATGAAGTTTCTTATCACTGTTAACCGTGGTAACATTCTATTAAGTTAAGGTAATTTCTAAGTACTAAAATTTTATTATTATGGCGTTTAATGTATCCAAATATATATTGTGTATATTTGTCTAGCCCGACGAGCTTGTACCCTTATCGACTTTTTGAAACCGTCTTACGCT
***********************************************************************************************************************************************.....(((((........((((..((((....)))).....)))).....)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 M053
female body
 O001
Testis
 SRR902009
testis
 M025
embryo
 M023
head
 O002
Head
 M024
male body		 GSM343915
embryo
........................................................GATCTTGATTCCTGATGTACT............................................................................................................................................................................. 21 0 1 26.00 26 13 0 4 9 0 0 0 0 0 0 0 0 0 0
................................................................TTCCTGATGTACTTTATGAAG..................................................................................................................................................................... 21 0 1 22.00 22 6 2 7 7 0 0 0 0 0 0 0 0 0 0
......................................................GAGATCTTGATTCCTGATGTA............................................................................................................................................................................... 21 1 1 12.00 12 6 2 1 3 0 0 0 0 0 0 0 0 0 0
...........................GTTCTGCTGAATGTATTAAAT.......................................................................................................................................................................................................... 21 0 1 12.00 12 2 1 2 2 1 2 0 0 2 0 0 0 0 0
....TGATTTATTACTAGCTTGTTA................................................................................................................................................................................................................................. 21 0 1 9.00 9 4 0 1 4 0 0 0 0 0 0 0 0 0 0
.........................................................ATCTTGATTCCTGATGTACTT............................................................................................................................................................................ 21 0 1 9.00 9 1 1 1 1 0 0 0 0 0 3 0 1 1 0
.TTTTGATTTATTACTAGCTTG.................................................................................................................................................................................................................................... 21 0 1 9.00 9 3 1 1 2 0 0 2 0 0 0 0 0 0 0
..........ATTACTAGCTTGTTAATGTTC........................................................................................................................................................................................................................... 21 0 1 8.00 8 3 3 0 2 0 0 0 0 0 0 0 0 0 0
.....................................................TGAGATCTTGATTCCTGATGTACTTT........................................................................................................................................................................... 26 1 1 8.00 8 0 6 2 0 0 0 0 0 0 0 0 0 0 0
..............................CTGCTGAATGTATTAAATTGA....................................................................................................................................................................................................... 21 0 1 8.00 8 1 1 1 0 0 1 0 0 2 1 1 0 0 0
.....................................................TGAGATCTTGATTCCTGATGT................................................................................................................................................................................ 21 1 1 8.00 8 5 1 0 2 0 0 0 0 0 0 0 0 0 0
..................................................................CCTGATGTACTTTATGAAGTT................................................................................................................................................................... 21 0 1 8.00 8 3 2 0 1 1 0 0 0 1 0 0 0 0 0
..........................................................TCTTGATTCCTGATGTACTTT........................................................................................................................................................................... 21 0 1 7.00 7 4 1 0 1 1 0 0 0 0 0 0 0 0 0
....................................................TTGAGATCTTGATTCCTGATGTACTTT........................................................................................................................................................................... 27 1 1 7.00 7 0 7 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TCCTGATGTACTTTATGAAGT.................................................................................................................................................................... 21 0 1 7.00 7 1 0 1 0 0 2 1 0 0 2 0 0 0 0
...............................................TTGATTTGCGATCTTGATTCC...................................................................................................................................................................................... 21 0 1 7.00 7 0 1 1 0 4 0 1 0 0 0 0 0 0 0
.....................................................TGCGATCTTGATTCCTGATGT................................................................................................................................................................................ 21 0 1 7.00 7 3 0 1 1 1 0 0 1 0 0 0 0 0 0
..........................TGTTCTGCTGAATGTATTAAA........................................................................................................................................................................................................... 21 0 1 7.00 7 2 0 0 1 2 2 0 0 0 0 0 0 0 0
................................................................................TGAAGTTTCTTATCACTGTTA..................................................................................................................................................... 21 0 1 5.00 5 1 1 0 0 1 0 0 0 0 1 0 0 1 0
.......................................................CGATCTTGATTCCTGATGTAC.............................................................................................................................................................................. 21 0 1 5.00 5 0 1 2 2 0 0 0 0 0 0 0 0 0 0
.............................TCTGCTGAATGTATTAAATTG........................................................................................................................................................................................................ 21 0 1 4.00 4 0 0 0 0 0 1 0 0 0 1 1 0 1 0
..............................................ATTGATTTGCGATCTTGATTC....................................................................................................................................................................................... 21 0 1 4.00 4 1 0 1 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................TTAAGGTAATTTCTAAGTACT.......................................................................................................... 21 0 1 4.00 4 2 1 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................................TTCTATTAAGTTAAGGTAATT.................................................................................................................... 21 0 1 4.00 4 0 1 2 0 1 0 0 0 0 0 0 0 0 0
............................................AAATTGATTTGCGATCTTGAT......................................................................................................................................................................................... 21 0 1 4.00 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0
......................................................................ATGTACTTTATGAAGTTTCTT............................................................................................................................................................... 21 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TTAATGTTCTGCTGAATGTAT............................................................................................................................................................................................................... 21 0 1 4.00 4 2 0 0 1 1 0 0 0 0 0 0 0 0 0
........TTATTACTAGCTTGTTAATGT............................................................................................................................................................................................................................. 21 0 1 4.00 4 1 0 1 1 1 0 0 0 0 0 0 0 0 0
......................................................GCGATCTTGATTCCTGATGTA............................................................................................................................................................................... 21 0 1 4.00 4 0 0 3 1 0 0 0 0 0 0 0 0 0 0
...TTGATTTATTACTAGCTTGTT.................................................................................................................................................................................................................................. 21 0 1 4.00 4 2 0 0 2 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TAAGGTAATTTCTAAGTACTA......................................................................................................... 21 0 1 4.00 4 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...............................................TTGATTTGCGATCTTGATTC....................................................................................................................................................................................... 20 0 1 4.00 4 0 3 1 0 0 0 0 0 0 0 0 0 0 0
.........................ATGTTCTGCTGAATGTATTAA............................................................................................................................................................................................................ 21 0 1 3.00 3 0 0 1 2 0 0 0 0 0 0 0 0 0 0
..........ATTACTAGCTTGTTAATGTT............................................................................................................................................................................................................................ 20 0 1 3.00 3 2 0 0 1 0 0 0 0 0 0 0 0 0 0
....................TGTTAATGTTCTGCTGAATGT................................................................................................................................................................................................................. 21 0 1 3.00 3 0 0 0 0 0 2 0 0 1 0 0 0 0 0
...........................GTTCTGCTGAATGTATTAAATT......................................................................................................................................................................................................... 22 0 1 3.00 3 0 0 0 0 0 1 0 0 2 0 0 0 0 0
................................................TGATTTGCGATCTTGATTCCTG.................................................................................................................................................................................... 22 0 1 3.00 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0
........................................................GATCTTGATTCCTGATGTACTT............................................................................................................................................................................ 22 0 1 3.00 3 0 0 2 1 0 0 0 0 0 0 0 0 0 0
..........................................................TCTTGATTCCTGATGTACTT............................................................................................................................................................................ 20 0 1 3.00 3 1 0 0 2 0 0 0 0 0 0 0 0 0 0
....................................................TTGCGATCTTGATTCCTGATGTACTTT........................................................................................................................................................................... 27 0 1 3.00 3 0 0 2 0 1 0 0 0 0 0 0 0 0 0
....................................................TTGCGATCTTGATTCCTGATGTACTT............................................................................................................................................................................ 26 0 1 3.00 3 0 1 0 0 2 0 0 0 0 0 0 0 0 0
...................................................TTTGCGATCTTGATTCCTGAT.................................................................................................................................................................................. 21 0 1 3.00 3 0 0 0 1 1 0 0 1 0 0 0 0 0 0
..........ATTACTAGCTTGTTAATGTTCT.......................................................................................................................................................................................................................... 22 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TTAAGTTAAGGTAATTTCTAA............................................................................................................... 21 0 1 3.00 3 0 1 0 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................TGGTAACATTCTATTAAGTTAAGGTAATT.................................................................................................................... 29 0 1 3.00 3 0 2 1 0 0 0 0 0 0 0 0 0 0 0
.....................GTTAATGTTCTGCTGAATGTA................................................................................................................................................................................................................ 21 0 1 3.00 3 0 0 0 0 2 0 0 1 0 0 0 0 0 0
.............................................AATTGATTTGAGATCTTGATT........................................................................................................................................................................................ 21 1 1 3.00 3 1 0 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................ATTCCTGATGTACTTTATGAA...................................................................................................................................................................... 21 0 1 3.00 3 0 0 0 1 1 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................................................TTATCGACTTTTTGA.............. 15 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
..................CTTGTTAATGTTCTGCTGAAT................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
.............................................AATTGATTTGCGATCTTGATTC....................................................................................................................................................................................... 22 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................ATTTGCGATCTTGATTCCTGAT.................................................................................................................................................................................. 22 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TGGTAACATTCTATTAAGT.............................................................................................................................. 19 0 1 2.00 2 0 0 0 0 0 0 0 1 0 0 0 0 0 1
.................................................GATTTGCGATCTTGATTCCTG.................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................GTTAAGGTAATTTCTAAGTAC........................................................................................................... 21 0 1 2.00 2 0 0 0 0 0 0 0 0 0 1 1 0 0 0
...............................TGCTGAATGTATTAAATTGAT...................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 1 0 0 0 1 0 0 0 0 0
............................................................TTGATTCCTGATGTACTTT........................................................................................................................................................................... 19 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................AAATTGATTTGAGATCTTGATTCCT..................................................................................................................................................................................... 25 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................AATTGATTTGAGATCTTGATTC....................................................................................................................................................................................... 22 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
..................................TGAATGTATTAAATTGATTTGAGAT............................................................................................................................................................................................... 25 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CCCGACGAGCTTGTACCCTTA.......................... 21 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0
...................................................................................AGTTTCTTATCACTGTTAACAC................................................................................................................................................. 22 2 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................CGATCTTGATTCCTGATGTACT............................................................................................................................................................................. 22 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
........................AATGTTCTGCTGAATGTATTA............................................................................................................................................................................................................. 21 0 1 2.00 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0
....................................................TTGAGATCTTGATTCCTGATGTACT............................................................................................................................................................................. 25 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................ATGGCGTTTAATGTATCCAAATATATAT................................................................ 28 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GATCTTGATTCCTGATGTAC.............................................................................................................................................................................. 20 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0
............................................................TTGATTCCTGATGTACTTTAT......................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 0 0 1 0 0 0 1 0 0 0
....................................................TTGCGATCTTGATTCCTGATGTACT............................................................................................................................................................................. 25 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0
............................TTCTGCTGAATGTATTAAATT......................................................................................................................................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................AAGGTAATTTCTAAGTACTAA........................................................................................................ 21 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................GTGGTAACATTCTATTAAGTT............................................................................................................................. 21 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0
................AGCTTGTTAATGTTCTGCTGAATGT................................................................................................................................................................................................................. 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
ATTTTGATTTATTACTAGCTT..................................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................ATGAAGTTTCTTATCACTGT....................................................................................................................................................... 20 0 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................TCCTGATGTACTTTATGAAGTTTCT................................................................................................................................................................ 25 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................TTGAGATCTTGATTCCTGATGTACTT............................................................................................................................................................................ 26 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
..........................TGTTCTGCTGAATGTATTAAAT.......................................................................................................................................................................................................... 22 0 1 2.00 2 0 0 0 0 0 1 0 0 1 0 0 0 0 0
.........................................................ATCTTGATTCCTGATGTACTTT........................................................................................................................................................................... 22 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................TGCGATCTTGATTCCTGATGTACTTT........................................................................................................................................................................... 26 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................GTATTAAATTGATTTGCGATC.............................................................................................................................................................................................. 21 0 1 2.00 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0
..................................................................................AAGTTTCTTATCACTGTTAAC................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................AGTTTCTTATCACTGTTAAC................................................................................................................................................... 20 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GATTTGCGATCTTGA.......................................................................................................................................................................................... 15 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
.........................ATGTTCTGCTGAATGTATTA............................................................................................................................................................................................................. 20 0 1 2.00 2 0 0 0 0 1 0 0 0 0 0 1 0 0 0
................AGCTTGTTAATGTTCTGCTGA..................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
.............................................................TGATTGCTGATGTAC.............................................................................................................................................................................. 15 1 4 1.75 7 0 0 7 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................TCTATTAAGTTAAGGTAATTT................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................TCTGCTGAATGTATTAAATT......................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................GTGTATATTTGTCTAGCCCGA.......................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................TTGTTAATGTTCTGCTGAATG.................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................TTGAGATCTTGATTCCTGATG................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CGACGAGCTTGTACCCTTATCG....................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................GTTCTGCTGAATGTATTAAATTGATTT.................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TGGTAACATTCTATTAAG............................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................TGAGATCTTGATTCCTGATGTACTTTAT......................................................................................................................................................................... 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................GGTAACATTCTATTAAGT.............................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................TCCTGATGTACTTTATGAAGTTTCTT............................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................GTAACATTCTATTAAGTTAAGGTAATTT................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TGCGATCTTGATTCCTGATGTACTTTAT......................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................AAATTTTATTATTATGGCGTTT................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TGGTAACATTCTATTAAGTTAAGGTAAT..................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................TGTTCTGCTGAATGTATTAAATT......................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................TGATTCCTGATGTACTTTAT......................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
......................................................................................TTCTTATCACTGTTAACCGTG............................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................ATATTTGTCTAGCCCGACGAGC..................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............CTAGCTTGTTAATGTTCTTCT....................................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................TAATGTTCTGCTGAATGTATT.............................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................TCTATTAAGTTAAGGTAATTTCT................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................ACCGTGGTAACATTCTATTAAGTTAAGGT........................................................................................................................ 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AACATTCTATTAAGTTAAGG......................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................ATTGTTAATGTTCTGCTGAATG.................................................................................................................................................................................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....TGATTTATTACTAGCTTGTTAA................................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................CTGTTAACCGTGGTAACATTC...................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTTCTAAGTACTAAAATTTTATTATT............................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................TTAATGTTCTGCTGAATGTATTAAATTG........................................................................................................................................................................................................ 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................TTGTCTAGCCCGACGAGCTTGTACCTT............................ 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................ATGAAGTTTCTTATCACTGTT...................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CGTGGTAACATTCTATTAAGTTAAGGTAAT..................................................................................................................... 30 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TGGTAACATTCTATTAAGTTAAGGTAATG.................................................................................................................... 29 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................TGCGATCTTGATTCCTGATGTA............................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
................................................TGATTTGCGATCTTGATTCC...................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GTCTAGCCCGACGAGCTTGTA................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........TTACTAGCTTGTTAATGTTC........................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................TTCCTGATGTACTTTATGAAGTTTCT................................................................................................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................TATGAAGTTTCTTATCACTGT....................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............CTAGCTTGTTAATGTTCTGCT....................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TTGAGATCTTGATTCCTGATGTAC.............................................................................................................................................................................. 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TTTCTTATCACTGTTAACCGT................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................CCTGCTGAATGTATTAAATTG........................................................................................................................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
......................................................GAGATCTTGATTCCTGATGTACTTT........................................................................................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................AATTTTATTATTATGGCGTTT................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TCGACTTTTTGAAACCGTCTT..... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................GTTCTGCTGAATGTATTAA............................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................TACCCTTATCGACTTTTTG............... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................TGATTTGAGATCTTGATTCCTGATGTACT............................................................................................................................................................................. 29 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................GTTCTGCTGAATGTATTAAATTGAT...................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................ATTAAATTGATTTGCGATCTTGATT........................................................................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................GTTCTGCTGAATGTATTAAATTGATT..................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................CTGAATGTATTAAATTGATTTG................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....TGATTTATTACTAGCTTGTTT................................................................................................................................................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................AGTTTCTTATCACTGTTAACA.................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................GGTAACATTCTATTAAGTTAA........................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....TGATTTATTACTAACTTGTTA................................................................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TTCCTGATGTACTTTATG........................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................GATTCCTGATGTACTTTATG........................................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................TTGATTTGCGATCTTGATTCT...................................................................................................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................TGCTGAATGTATTAAATTGATT..................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CGTGGTAACATTCTATTAAGTTAAGGTAA...................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CTTATCACTGTTAACCGT................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................AGGTAATTTCTAAGTACTAAAA...................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............ATAGCTTGTTAATGTTCTGCTG...................................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................ACATTCTATTAAGTTAAGGTA....................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AACATTCTATTAAGTTAAGGTAATTTCT................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................GTTAATGTTCTGCTGAATGT................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................TTCCTGATGTACTTTATGAAGT.................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................TTATTATGGCGTTTAATG............................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................CTGCTGAATGTATTAAATTGAT...................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........TTACTAGCTTGTTAATGTTCTG......................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CCTTATCGACTTTTTGAAACCGTCTT..... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................AATGTTCTGCTGAATGTATTAAATTGAT...................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TAAGTACTAAAATTTTATTATT............................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................ATTCTATTAAGTTAAGGTAAT..................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................GTATTAAATTGATTTGAGATCTTGAT......................................................................................................................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GTAATTTCTAAGTACTAAAA...................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................TTAAGGTAATTTCTAAGTACTAAAATT.................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................AAATTGATTTGCGATCTTGATT........................................................................................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.TTTTGATTTATTACTAGCTT..................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................TATTAAATTGATTTGAGATCT............................................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................TGTTAATGTTCTGCTGAATGTA................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................TTTGCGATCTTGATTCCTGA................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................AATTAAATTGATTTGCGATCTT............................................................................................................................................................................................ 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................TTTGCGATCTTGATTCCTGATG................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................GCTGAATGTATTAAATTGATTTG................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................AGGCGTTTAATGTATCCAAATATG................................................................... 24 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GGTAATTTCTAAGTACTAAAA...................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................AAATTGATTTGAGATCTTGATTCCTGAT.................................................................................................................................................................................. 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............TACTAGCTTGTTAATGTTCTG......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
............................................................TTGATTCCTGATGTACTTTATGAAG..................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................TTTCTAAGTACTAAAATTTTA................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................ATTAAATTGATTTGAGATCTTGATTCCT..................................................................................................................................................................................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................AGCCCGACGAGCTTGTACCT............................. 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TCTTGATTCCTGATGTACTTTA.......................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GATCTTGATTCCTGATGTACTTTAT......................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................AATTGATTTGCGATCTTGATT........................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TTGCGATCTTGATTCCTGATG................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............CTAGCTTGTTAATGTTCTGC........................................................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................GTATTAAATTGATTTGCGATCTTGATT........................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................GATTCCTGATGTACTTTATGA....................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................CTTGATTCCTGATGTACTTTA.......................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................ATTGATTTGAGATCTTGATTC....................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................TTAATGTTCTGCTGAATGTA................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................GAAGTTTCTTATCACTGTTAA.................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
................................................TGATTTGCGATCTTGATTCCT..................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................TGATTTGAGATCTTGATTCCTGATGTACTT............................................................................................................................................................................ 30 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...TTGATTTATTACTAGCTTGT................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................TTAATGTTCTGCTGAATG.................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....GATTTATTACTAGCTTGTTAA................................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................GTACTTTATGAAGTTTCTTATC............................................................................................................................................................ 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................AATGTTCTGCTGAATGTATT.............................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................ATTCTATTAAGTTAAGGTAA...................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................GTTAAGGTAATTTCTAAGT............................................................................................................. 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................TTGATTTGCGATCTTG........................................................................................................................................................................................... 16 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............TTAGCTTGTTAATGTTCTGCTGAATGT................................................................................................................................................................................................................. 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CTATTAAGTTAAGGTAATTT................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GGTAATTTCTAAGTACTAAAAT..................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................ATATTTGTCTAGCCCGACGAGCTTGTA................................ 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................ATTGATTTGAGATCTTGATTCCTGATGT................................................................................................................................................................................ 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................TGTTAATGTTCTGCTGAATGTATT.............................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................AAATTGATTTGCGATCTTGA.......................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TTAAGTTAAGGTAATTT................................................................................................................... 17 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................TAAGGTAATTTCTAA............................................................................................................... 15 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TCTATTAAGTTAAGGT........................................................................................................................ 16 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................ACCGTTATCGATTTTTTGA.............. 19 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................ACCATTATCGATTTTTTGA.............. 19 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................TTTCTTATCACTGTTAACACC................................................................................................................................................ 21 3 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................TTCTTATCACTGTTAACACC................................................................................................................................................ 20 3 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:10049326-10049575 - dsi_11964 T-AAAACTAAATAATGA---TCGA----ACAATTACAA-GACGACTTACATAA----------------------------------------------------TTTAACTAAACGCT--------------AGAAC-TAAGGA-CTA--CA--TGAAATACTT-----------CAAAGAATAG-T-------GA--CA--ATT--GGCACCA-T-----TGTAAGATA---ATTCAATTCCATTAAAGATTCATG------ATTTTAAAATAATAATACCGCAAATTACATAGGTTTATA----T--ATA----------------------------------------ACACA----TATAAACA-----------GA-----TCG-GGCTGCTCG----------AACATGGGAATAGCT-----------------------GAAAAA--CTTTGGCAG---AATGCGA------
droSec2 scaffold_0:10768140-10768391 - T-AAAACTAAATAATGA---TCGA----ACAATTACAA-GACGACTTACATAA----------------------------------------------------TTTAACTAAACGCT--------------AGAAC-TAAGGA-CTA--CA--TGAAATACTT-----------CAAAGAATAG-T-------GA--CA--ATTGTGGCACCA-T-----TGTAAGATA---ATTCAATTCCATTAAAGATTTATG------ATTTTAAAATAATAATACCGCAAATTACATAGGTTTATA----T--ATA----------------------------------------ACACA----TATAAACA-----------GA-----TCG-GGCTGCTCG----------AACATGGAAATAGCT-----------------------GAAAAA--CTTTGGCAG---AATGCGA------
dm3 chr3R:11179494-11179745 + T-AAAACTAAATAATGA---TCGA----ACAATTACAA-GACGACTTACATAA----------------------------------------------------TTTAACTAAACTCT--------------AGAAC-TAAGCG-CTA--CA--TGAAATACTT-----------CAAAGAATAG-T-------GA--CA--ATTGTGGCACCA-T-----TGTAAAATA---ATTCAATTCCATTAAAGATTCATG------ATTTTAAAATAATAATACCGCAAATTACATAGGTTTATA----T--ATA----------------------------------------ACACA----TATAAACA-----------GA-----TCG-GGCTGCTCG----------AACATGGAAATAGCT-----------------------GAAAAA--CTTTGGCAG---AATGCGA------
droEre2 scaffold_4770:10704988-10705239 + T-AAAACTAAATAATGA---TCGA----ACAATTACAA-GACGACTTACATAA----------------------------------------------------ATTAACTAAACTCT--------------AGAAC-TAAGGA-CTA--CA--TGAAACACTT-----------CAAAGAATGG-T-------GA--CA--ATTCTGGCACCA-T-----TGTATAATA---ATTCAATTCCATTAAAGTTTCATG------ATTTTAAAATAATAATACCGCAAATTACATAAGTTTATA----T--ATA----------------------------------------ACACA----TATAAACA-----------GA-----TCG-GGCTGCTCG----------AACATGGAGAACGCT-----------------------GAAAAA--CTTTGGCAG---AATGCGA------
droYak3 3R:15252856-15253107 - T-AAAACTAAATAATGA---TCGA----ACAATTACTA-GACGACTTACATAA----------------------------------------------------ATTAACTAAACTCT--------------AGAAC-TAAGGA-CTA--CA--TGAAATACTT-----------CAAAGAATAG-T-------GA--CA--ATTCTGGCACCA-T-----TGTAAAATA---ATTCAATTCCATTAAAGATTCATG------ATTTTAAAATAATAATACCGCAAATTACATAAGTTTATA----T--GTA----------------------------------------GCACA----TATAAACA-----------GT-----TCG-GGCTGCTCG----------AACATGGAAAACGCT-----------------------GAAAAA--CTTTGGCAG---AATGCGA------
droEug1 scf7180000409444:47435-47684 - T-AAAACTAATTAATGA---TCGA----ACAATTACAA-G---ACTTACACAA----------------------------------------------------ATTAACTAAATTCT--------------AAAACGTAAGGA-CTA--CA--TGAAATACTT-----------TGAAAAATAG-T-------GA--CA--ATTGTGGCACCA-T-----TGTAAAATG---ATTCAATTCCATTAAAGATTCATG------ATTTTAAAATAATAATACCGCAAATTACAATAGTTTATA----T--ATA----------------------------------------ACAGA----TATAAATA-----------GA-----TCG-GGCTGCTGG----------AACATGAAAAAAGCT-----------------------GAAACA--CTTTGGCAG---AATGCGA------
droBia1 scf7180000302136:767684-767948 + T-AAAACTAATTAATGA---TCGA----ACAATTACAA-GACGACTTACATAA----------------------------------------------------GTTAACTAAAGCCT--------------AGAACGTAAGGA-CTA--CA--TTAAATACTT-----------TAGAAAATAG-T-------GA--CA--ATCTAGGCACCA-C-----TGTAAACTG---ATTCAATTCCATTAAAGATTCATG------TTTTTAAAATAATAATACCGCAAATTACACGAGTTTATA----T--ATA----ATA---------------------------------GGACA----TATAAACA-----------GA-----TGGGGGCTGCTAG----------AGCATGGAAAAAGCT---------------GAAACGCTGAAACA--CTTTGGCAG---AATGCGA------
droTak1 scf7180000415769:2002518-2002782 - T-AAAACTAATTAATGA---TCGA----ACAATTACGACGACGACTTACATAA----------------------------------------------------ATTAACTAAAGCCT--------------AGAACGTAAGGA-CTA--CA--TGAAATACTT-----------TAGAAAATAG-T-------GA--CA--ATTGTGGCACCA-T-----TGTAAAATG---ATTCAATTCCATTAAAGATTCATG------ATTTTAAAATAATAATACCGCAAATTACACAAGTTCATA----TGTATA----------------------------------------ACACA----TATAAACA-----------GA-----TCGGGGCTGCTGGAGCATTG--GAACATGGAGTAAGCT-----------------------GAAACA--CTTTGGCAG---AATGCGA------
droEle1 scf7180000491080:939007-939261 + T-ACAACTAATTAATGA---TCGA----ACAATTACAT-GGCGACTTACATAA----------------------------------------------------ATTAACTAAGTTCT--------------AGAACGTAAGGA-CTA--CA--TGAAATACTT-----------CAGAAGATAG-T-------GA--CA--GTTGTGGCACCA-T-----TGTAAAATGAT-ATTCAATTCCATTAAAGTTTCATG------ATTTTAAAATAATAATACCGCAAATAACACAAGTTTATA----T--ACA----------------------------------------ACACA----TATAAACA-----------GA-----TCG-GGCTGCTGG----------AACATGGAAAAATCT-----------------------GAAACA--CTTTGGCAG---AATGCGA------
droRho1 scf7180000779250:159868-160118 - T-AAAACTAATTAATGA---TCGA----ACAATTACAA-GACGACTTACATAA----------------------------------------------------ATTAACTAAATTCT--------------AGAACGTAAGGA-CTA--CA--TGAAATACTT-----------CAGAAAATAG-T-------GA--CA--ATTGTGGCACCA-T-----TGTAAAATG---ATTCAATTCCATTAAAGTTTCATG------TTTTTAAAATAATAATACCGCAAATTACACATGTTTATA----T--ATA----------------------------------------ACACA------TAAACA-----------GA-----TCG-GGCTGCTGG----------AACATGAAAAAAGCA-----------------------GAAACA--CTTTGGCAG---AATGCGA------
droFic1 scf7180000452523:522977-523229 + T-AAAACTAATTAATGA---TCGA----AGGATTACAA-CACGACTTACATAA----------------------------------------------------ATTAACTAAATTCT--------------AGAACGTAAGGA-CTA--CA--TGAAATACTT-----------TAGAAAATAG-T-------GA--CA--ATAGTGGCACCA-T-----TGTAAAATG---ATTCAATTCCATTAAAGATTCATG------TTTTTAAAATAATAATACCGCAAATTACATTGGTTTATA----C--AAT----------------------------------------ACACA----TATAAACA-----------GA-----TCG-GGCTGCTGG----------AACATGGAGAAAGCA-----------------------AAAACA--CTTTGGCAG---AATGCGA------
droKik1 scf7180000302639:1510194-1510430 + T-ACAACTAATTAATGA---TCGA----ACAACTAAGA-GACGACTTACATAA----------------------------------------------------ATTAGC-------T--------------AGAACGTAAGAA-CTA--CA--TGAAATACTT-----------TAGAGAATAG-C-------G---CA--ATGGTTGCGCCC-G-----TGTAAAATGATTATTCAATTCCATTAAAGATTCATG-------TTTTAAAATAATAATACCGCAGATTACGTAAGTTTATA----T--ATA----------------------------------------ACACATGTGTATAAACC-----------GT-----TCA-GGCTGCTGA------------------------C-----------------------GAAACA--CTTTGGCAG---AATGCGA------
droAna3 scaffold_12911:3397652-3397902 - T-AAAACTAATTAATGA---TCAA----ACAATTACAA-GACGGCTTATATAA----------------------------------------------------ATTAGCTAAGTTCT--------------AGAACGTAAGGA-CTA--CA--CGAAATACTT-----------GCGAGAACAG-T-------GA--CAGAGTTGTGGCACCG-TTT---TGTAAAATG---ATTCAATTCCATTAAAGATTCATGATTCGAATTTAAAAATAATAATACCTCTAATTACATAAGCCTATG----T--AAT--------------------------------------------C----TACAGACG-----------CGTCTG-TGG-GGC---------ACTGCTGAACGGGG----------------------------------AAA--CTTTGGCAG---AATGC--------
droBip1 scf7180000396640:262225-262483 - T-AAAACTAATTAATGA---TCAA----ACAATTACAA-GACGGCTTATATAA----------------------------------------------------ATTAGCTAAGTTCT--------------AGAACGTAAGGA-CTA--CA--TGAAATACTT-----------GCGAGAACAG-T-------GA--CAAAGTTGTGGCACCA-TTT---TGTAAAATG---ATTCAATTCCATTAAAGATTCATG------AT-TTAAAATAATAATACCTCAAATTACATAAGACTATG----T--AAT--------------------------------------------C----TACAGACG-----------CATCTG-TGGGGACTGCTGT------------CGGGG---AATCA---------------G-------GGAGAA--CTTTGGCAG---AATGCGAGAACGC
dp5 2:4120578-4120854 + T-AAAACACAATAATGA---TGGATGGGACACTTACAT-GG-----TACATAA----------------------------------------------------TTTAACTAATTTCT--------------AGAACGTAAGGATCTAACCA--GGAAATATGT-----------GT-------------------------------GTACTC-T-----AAGAAAACT---ATTCAATTCCATTCAAGATTCGTG------AT-TAAACATAATAATACCGCGAATTACATG--TATAAA----T--ATA-------AGAA-T------ATAAATAAAGACAAGCACCGCACACA----TATCA---TATGGTACACAGATCGGTTTG-GGCTGCTATAAC--------ACATGGAAAAAGCT---------------T-------GGAACA---TTTGGCAGAGAAATGCGA------
droPer2 scaffold_7:234049-234325 - T-AAAACACAATAATGA---TGGATGGGACACTTACAC-GG-----TACATAA----------------------------------------------------TTTAACTAATTTCT--------------AGAACGTAAGGATCTAACCA--GGAAATATGT-----------GT-------------------------------GTACTC-T-----AAGAAAACT---ATTCAATTCCATTCAAGATTCGTG------AT-TAAACATAATAATACCGCGAATTACATG--TATAAA----T--ATA-------AGAA-T------ATAAATAAAGACAAGCACCGCACACA----TATCA---TATGGTACACAGATCGGTTTG-GGCTGCTATAAC--------ACATGGAAAAAGCT---------------T-------GGAACA---TTTGGCAGAGAAATGCGA------
droWil2 scf2_1100000004902:4008494-4008810 + T-ATAACTAATTAATAATGATCAA----ACTC---------------ACATAAATATCTACAAACTATACATATATATATATTTTTAGGAGAAATAA--------AGCTACTTAAAACAAGATCTAACATACAATACAATAAAGA-CTA--CAA-TGAAATACTTTTTCTTTTTTTTCGAGAATAT-TTTGTGGACACAATAAATTGTTGCACCCATTTTGTTTTTAGGCA---ATTCAATTCCAGGCAAAAAGTAAA------ATTAAAAAATAATAATACCGCAAATTACATTAGCTACAA----T--AAA---------A------------------------------GTATA----TATCAACA-----------TT-----TTG-TA--------------------------GTAAAT---------------A-------GGAATAAAAAATAACAC---AATGTAA------
droVir3 scaffold_12855:1790009-1790257 - T-AAAACTAAATAATGT---TCGA----ACAACTAG----ATGAAAAACATAA----------------------------------------------------TTTAATTACAATCT--------------AAGACATAAGGA-CTA--CAC-ATAAATACTT-----------TCGAGAGCAGGC-------GA--AAAACTTGT---------------------TG---AATCAATTCCATT-------CGC-------ATTACAAAATAATAATACCGAGAATTACATAAAC-TATA----T--ATA-------GGAA-T------A---ATGTTGACAA-------ACACA----CACAATCA-----------GA-----GCG-AAACACAGG----------CAAACTGAAGGCACCAAATAAAAATGATTT-----------AAA--TTC------------GAAT------
droMoj3 scaffold_6540:32068313-32068581 - TTATAACTAAATAATGA---AGGA----ACCACTAGTA-GACAA--AACATAA----------------------------------------------------TTTAATTACAATCT--------------AAGACAT-GGGA-CTA--CAAATAAAATACTT-----------TCGAGAGCAG-C-------GA--AACACTTGTTACACTG-T-----TGATTAATTACGCTTCAATTCCATACAGTAATCGCA-------TTACAAAATAATAATACCGAGAATTACATAAACT-ATTTATAC--ATA---TATAGGAAATAATAATATATATAGT--------------------------AAT-----------AA-----TCA-GAGTG---A----------AGCACAAAACTTGTT-----------------------GAGGA----TAT-AAAA---AATATGA------
droGri2 scaffold_14830:177136-177357 - T-AGAACTAAATAATGA---TGGA----GTAACTAGAT-GGGAAA---TACAA--------------------------------------------TTAATTATGATAATTTAAATCT--------------AAGACATAAAAT-CTA--CA--AAAAATACTT-----------TCGAGA-------------GA--CA--GTTTT---------------------CG---ATTCAATTCCATACAA-TTAAACG-----CATTACAAAATAATAATACCGAGAATTACATAAACTAAT-----T--ACACTACATAGGA----------------------------------------ATATACA-----------GA-----TA-------CAGA------------------------C----------GAATT-----------CAA--TTCAAACAG---AAC-CAC------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
T-AAAACTAAATAATGA---TCGA----ACAATTACAA-GACGACTTACATAA----------------------------------------------------TTTAACTAAACGCT--------------AGAAC-TAAGGA-CTA--CA--TGAAATACTT-----------CAAAGAATAG-T-------GA--CA--ATT--GGCACCA-T-----TGTAAGATA---ATTCAATTCCATTAAAGATTCATG------ATTTTAAAATAATAATACCGCAAATTACATAGGTTTATA----T--ATA----------------------------------------ACACA----TATAAACA-----------GA-----TCG-GGCTGCTCG----------AACATGGGAATAGCT-----------------------GAAAAA--CTTTGGCAG---AATGCGA------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................TAAACGCT--------------AGAAC-TAAGGA-CT..............................................................................................................................................................................................................................................................................................................................................21179.0079107100002023405000000
......................................................................................................................T--------------AGAAC-TAAGGA-CTA--CA--TGAA...................................................................................................................................................................................................................................................................................................................................21120.002000000044840000000
....................TCGA----ACAATTACAA-GACGACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................21113.001331800000000010000
...................................CAA-GACGACTTACATAA----------------------------------------------------TTTA.....................................................................................................................................................................................................................................................................................................................................................................................21111.001100000001110053000
..................................................................................................................................................CTA--CA--TGAAATACTT-----------CAAAGA............................................................................................................................................................................................................................................................................................................21110.001000000020350000000
..................................................................................................................................................................................AAGAATAG-T-------GA--CA--ATT--GGCAC.............................................................................................................................................................................................................................................................................2118.00852100000000000000
...............................................................................................................TAAACGCT--------------AGAAC-TAAGGA-C...............................................................................................................................................................................................................................................................................................................................................2018.00820000004100010000
............................................................................................................................................................................................................................................................................................................................................................................TAAACA-----------GA-----TCG-GGCTGCTCG----------A......................................................................2117.00700000025000000000
......................................................................................................................T--------------AGAAC-TAAGGA-CTA--CA--TGAAA..................................................................................................................................................................................................................................................................................................................................2215.00500000010400000000
.............................................................................................................................................................AAATACTT-----------CAAAGAATAG-T-------GA--...........................................................................................................................................................................................................................................................................................2115.00500000011201000000
.....................................................................................................................................AGAAC-TAAGGA-CTA--CA--TGAA...................................................................................................................................................................................................................................................................................................................................2015.00500000131000000000
...........................................................................................................TAACTAAACGCT--------------AGAAC-TAAG...................................................................................................................................................................................................................................................................................................................................................2115.00500000021110000000
.................................TACAA-GACGACTTACATAA----------------------------------------------------TT.......................................................................................................................................................................................................................................................................................................................................................................................2115.00500000002200001000
.........................................................................................................................................C-TAAGGA-CTA--CA--TGAAATACT..............................................................................................................................................................................................................................................................................................................................2114.00400100011010000000
.....................................A-GACGACTTACATAA----------------------------------------------------TTTAACT..................................................................................................................................................................................................................................................................................................................................................................................2214.00400000012100000000
...AAACTAAATAATGA---TCGA----ACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.00400000020200000000
............................................................................................................................................................................................................................................................................................................................................................................TAAACA-----------GA-----TCG-GGCTGCTCG----------AA.....................................................................2214.00400000022000000000
..................................................................................................................................................................................................................................................................................................................................................................CACA----TATAAACA-----------GA-----TCG-GGCT......................................................................................2113.00301000002000000000
..................................ACAA-GACGACTTACATAA----------------------------------------------------TTT......................................................................................................................................................................................................................................................................................................................................................................................2113.00300000001010010000
................................................................................................................................................................................CAAAGAATAG-T-------GA--CA--ATT--GGC...............................................................................................................................................................................................................................................................................2113.00300020000001000000
.....................CGA----ACAATTACAA-GACGACTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00300000000000012000
.......TAAATAATGA---TCGA----ACAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200000000011000000
............................................................................................................................................AAGGA-CTA--CA--TGAAATACTT-----------CA................................................................................................................................................................................................................................................................................................................2212.00210100000000000000
................................TTACAA-GACGACTTACATAA----------------------------------------------------T........................................................................................................................................................................................................................................................................................................................................................................................2112.00200000100000010000
....................................................................................................................................................................................................................................................................................................................................................................CA----TATAAACA-----------GA-----TCG-GGCTGC....................................................................................2112.00200000001100000000
....................................................................................................................................................................................................................................................ATTAAAGATTCATG------ATTTTAA...................................................................................................................................................................................................................2112.00200000000200000000
...................................CAA-GACGACTTACATAA----------------------------------------------------TTT......................................................................................................................................................................................................................................................................................................................................................................................2012.00200000000100010000
..................................................................................................................................................................................................................................................CCATTAAAGATTCATG------ATTTT.....................................................................................................................................................................................................................2112.00200000002000000000
............................................................................................................................................AAGGA-CTA--CA--TGAAATACT..............................................................................................................................................................................................................................................................................................................................1912.00220000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------GAAAAA--CTTTGGCAG---AATGC........2112.00200000002000000000
..........................................................................................................................................................................................................................................................................................................................................................................TATAAACA-----------GA-----TCG-GGCTGCT...................................................................................2012.00200000020000000000
................................TTACAA-GACGACTTACATAA----------------------------------------------------TT.......................................................................................................................................................................................................................................................................................................................................................................................2212.00200000010000010000
.......TAAATAATGA---TCGA----ACAATTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000000110000000
..............................................................................................................CTAAACGCT--------------AGAAC-TAAGG..................................................................................................................................................................................................................................................................................................................................................1912.00200000001100000000
................................................................................................................AAACGCT--------------AGAAC-TAAGGA-CT..............................................................................................................................................................................................................................................................................................................................................2012.00220000000000000000
......................GA----ACAATTACAA-GACGACTTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000000000020000
.........................................................................................................TTTAACTAAACGCT--------------AGAAC-T......................................................................................................................................................................................................................................................................................................................................................2012.00202000000000000000
...............................................................................................................TAAACGCT--------------AGAAC-TAAGGA-................................................................................................................................................................................................................................................................................................................................................1912.00200000110000000000
...............................................................................................................TAAACGCT--------------AGAAC-TAAGGA-CTA--C..........................................................................................................................................................................................................................................................................................................................................2312.00200001001000000000
...................................................................................................................................................TA--CA--TGAAATACTT-----------CAAAGAA...........................................................................................................................................................................................................................................................................................................2112.00200000101000000000
.............ATGA---TCGA----ACAATTACAA-GAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000100000000
T-AAAACTAAATAATGA---TCGA----......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000010000000
.................................................................................................................................................................................................................GCACCA-T-----TGTAAGATA---ATTCA...................................................................................................................................................................................................................................................2111.00100000000010000000
...................................................................................................................................................................................................................................................CATTAAAGATTCATG------ATTTTA....................................................................................................................................................................................................................2111.00100000000100000000
..............................................................................................................CTAAACGCT--------------AGAAC-TAAGGA-CT..............................................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
...............................................................................................................TAAACGCT--------------AGAAC-TAAGGA-CA..............................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
...........................................................................................................................................TAAGGA-CTA--CA--TGAAATAC...............................................................................................................................................................................................................................................................................................................................1911.00100000100000000000
.................................................................................................................AACGCT--------------AGAAC-TAAGGA-CTA--C..........................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
...................................................................................................................................................................TT-----------CAAAGAATAG-T-------GA--CA--ATT--GA................................................................................................................................................................................................................................................................................2211.00100000000010000000
....AACTAAATAATGA---TCGA----ACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
............................................................................................................AACTAAACGCT--------------AGAAC-TAAGG..................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................CACA----TATAAACA-----------GA-----TCG-GGCTGCTCG----------A......................................................................2711.00100000000010000000
....................................................A----------------------------------------------------TTTAACTAAACGCT--------------AGAAC-T......................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
..................................................................................................................................................................CTT-----------CAAAGAATAG-T-------GA--CA--ATT--..................................................................................................................................................................................................................................................................................2111.00100000001000000000
.................................................................................................................AACGCT--------------AGAAC-TAAGGA-CT..............................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
...............................ATTACAA-GACGACTTACATAA----------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TCG-GGCTGCTCG----------AACATGGGA..............................................................2111.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGAATAGCT-----------------------GAAAAA--CTT......................2111.00100000000001000000
................................................................................................................AAACGCT--------------AGAAC-TAAGGA-CTA--...........................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................TA----------------------------------------ACACA----TATAAACA-----------GA-----TCG-GGCTGC....................................................................................2611.00100000001000000000
.....................................................................................................................CT--------------AGAAC-TAAGGA-CTA--CA--TGAA...................................................................................................................................................................................................................................................................................................................................2211.00100000000100000000
....................TCGA----ACAATTACAA-GACGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
......................................................................................................................................GAAC-TAAGGA-CTA--CA--TGAAA..................................................................................................................................................................................................................................................................................................................................2011.00100000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGCTCG----------AACATGGGAATAGC.........................................................2011.00100001000000000000
.............................................................................................................ACTAAACGCT--------------AGAAC-TAAG...................................................................................................................................................................................................................................................................................................................................................1911.00100000010000000000
..............TGA---TCGA----ACAATTACAA-GACGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000100000000
.................................................................................................................................................................................................................................................TCCATTAAAGATTCATG------ATTT......................................................................................................................................................................................................................2111.00100000000010000000
.................................................................................................................AACGCT--------------AGAAC-TAAGGA-CTA--...........................................................................................................................................................................................................................................................................................................................................2011.00100000000100000000
.........................................................................................................TTTAACTAAACGCT--------------AGAAC-TAAGGA-................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
........AAATAATGA---TCGA----ACAATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
.....................................................................................................................................................................................AATAG-T-------GA--CA--ATT--GGCACCA-..........................................................................................................................................................................................................................................................................2011.00110000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................A-----TCG-GGCTGCTCG----------AACATGGG...............................................................2111.00110000000000000000
...............................................................................................................TAAACGCT--------------AGAAC-TAAGGA-CC..............................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATAAACA-----------GA-----TCG-GGCTGCTCG----------.......................................................................2111.00100000001000000000
............................................................................................................................................................................................................................................................TTCATG------ATTTTAAAATAAA.............................................................................................................................................................................................................1911.00100000001000000000
.....................................................................................................................CT--------------AGAAC-TAAGGA-CTA--CA--TGA....................................................................................................................................................................................................................................................................................................................................2111.00100000000100000000
......CTAAATAATGA---TCGA----AC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000001000000000
............AATGA---TCGA----ACAATTACAA-GA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
...............................................................................................................................................................................................................................................ATTCCATTAAAGATTCATG------ATT.......................................................................................................................................................................................................................2211.00100000000010000000
.................................................................................................................................................................................................................................AAGATA---ATTCAATTCCATTA..........................................................................................................................................................................................................................................2011.00100000100000000000
.......................................................................................................................................................................................................................................................................................................................TA----------------------------------------ACACA----TATAAACA-----------GA-----TCG-GG........................................................................................2211.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCT-----------------------GAAAAA--CTTTGG...................1811.00100000001000000000
.............................................................................................................ACTAAACGCT--------------AGAAC-TAAGGG-................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................AAACA-----------GA-----TCG-GGCTGCTCG----------AAC....................................................................2211.00100000010000000000
.................................................................................................................AACGCT--------------AGAAC-TAAGGA-CTA--CA--TGA....................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
..............................................................................................................CTAAACGCT--------------AGAAC-TAAGGA-C...............................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
........................................................................................................................................................A--TGAAATACTT-----------CAAAGAATAG-.......................................................................................................................................................................................................................................................................................................2111.00100001000000000000
...................................................................................................................................................................................................................................................CATTAAAGATTCATG------ATT.......................................................................................................................................................................................................................1811.00100000100000000000
...........................................................................................................TAACTAAACGCT--------------AGAAC-TAAGGA-................................................................................................................................................................................................................................................................................................................................................2311.00100000000000010000
.....................................................................................................................CT--------------AGAAC-TAAGGA-CTA--CA--TGAAATAC...............................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
..............................................TACATAA----------------------------------------------------TTTAACTAAACGCT--------------.............................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
.............................................................................................................................................................................................................................................................................................................................................................................AAACA-----------GA-----TCG-GGCTGCTCG----------AA.....................................................................2111.00100000010000000000
..................................................................................................................................................................................AAGAATAG-T-------GA--CA--ATT--GGC...............................................................................................................................................................................................................................................................................1911.00100001000000000000
...................................................................................................................................................................................................GA--CA--ATT--GGCACCA-T-----TGTA................................................................................................................................................................................................................................................................1911.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................ACACA----TATAAACA-----------GA-----TCG-GGC.......................................................................................2111.00101000000000000000
..........................................................................................................TTAACTAAACGCT--------------AGAAC-TAAGG..................................................................................................................................................................................................................................................................................................................................................2311.00100000000100000000
....................................AA-GACGACTTACATAA----------------------------------------------------TTTAT....................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGGGAATAGCT-----------------------GAAAAA--CTTTG....................2211.00100000000001000000
......................................................................................................................T--------------AGAAC-TAAGGA-CTA--CA--TGA....................................................................................................................................................................................................................................................................................................................................2011.00100001000000000000
........................................................................................................................................................................................................................T-----TGTAAGATA---ATTCAATTCCA.............................................................................................................................................................................................................................................2111.00100001000000000000
...........................................................................................................TAACTAAACGCT--------------AGAAC-TAAGG..................................................................................................................................................................................................................................................................................................................................................2211.00100000000000010000
.................................TACAA-GACGACTTACATAA----------------------------------------------------TTT......................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
.................................................................................................................................................................................AAAGAATAG-T-------GA--CA--ATT--GGC...............................................................................................................................................................................................................................................................................2011.00110000000000000000
.................................................................................................................................................................................................................................AAGATA---ATTCAATTCCATTAA.........................................................................................................................................................................................................................................2111.00100000100000000000
.........................................................................................................................................................................................G-T-------GA--CA--ATT--GGCACCA-T-----T...................................................................................................................................................................................................................................................................1811.00100000000001000000
................................................................................................................................................................TACTT-----------CAAAGAATAG-T-------GA--CA--ATT--GTGG..............................................................................................................................................................................................................................................................................2711.00100000010000000000
....AACTAAATAATGA---TCGA----ACAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
.......................................................................................................................................................................................TAG-T-------GA--CA--ATT--GGCACCA-T-----TG..................................................................................................................................................................................................................................................................2111.00100000000001000000
.............................................TTACATAA----------------------------------------------------TTTAACTAAACGCT--------------.............................................................................................................................................................................................................................................................................................................................................................2211.00100000000100000000
......................................................................................................................................GAAC-TAAGGA-CTA--CA--TGAAAT.................................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
...................................................AA----------------------------------------------------TTTAACTAAACGCT--------------AGAAC-.......................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AACA-----------GA-----TCG-GGCTGCTCG----------AAC....................................................................2111.00100000010000000000
.................................................................................................................................................................................AAAGAATAG-T-------GA--CA--ATT--GTGG..............................................................................................................................................................................................................................................................................21110.55600000031200000000
................................................................................................................................................................................CAAAGAATAG-T-------GA--CA--ATT--GTG...............................................................................................................................................................................................................................................................................2120.50100000000100000000
.................................................................................................................................................................................AAAGAATAG-T-------GA--CA--ATT--GTG...............................................................................................................................................................................................................................................................................2030.33100000001000000000
..................................................................................................................................................................................AAGAATAG-T-------GA--CA--ATT--GTGG..............................................................................................................................................................................................................................................................................20180.06100000001000000000
droSec2
T-AAAACTAAATAATGA---TCGA----ACAATTACAA-GACGACTTACATAA----------------------------------------------------TTTAACTAAACGCT--------------AGAAC-TAAGGA-CTA--CA--TGAAATACTT-----------CAAAGAATAG-T-------GA--CA--ATTGTGGCACCA-T-----TGTAAGATA---ATTCAATTCCATTAAAGATTTATG------ATTTTAAAATAATAATACCGCAAATTACATAGGTTTATA----T--ATA----------------------------------------ACACA----TATAAACA-----------GA-----TCG-GGCTGCTCG----------AACATGGAAATAGCT-----------------------GAAAAA--CTTTGGCAG---AATGCGA------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................TAAACGCT--------------AGAAC-TAAGGA-CT..............................................................................................................................................................................................................................................................................................................................................21111.00115114
..............TGA---TCGA----ACAATTACAA-GACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0022000
..............................................................................................................CTAAACGCT--------------AGAAC-TAAGGA-................................................................................................................................................................................................................................................................................................................................................2012.0022000
.............................................................................................................................................................................................................................................................................................................................................................................AAACA-----------GA-----TCG-GGCTGCTCG----------A......................................................................2012.0020002
................................................................................................................................................................................CAAAGAATAG-T-------GA--CA--ATTGTG.................................................................................................................................................................................................................................................................................2112.0021001
............AATGA---TCGA----ACAATTACAA-GA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...................................CAA-GACGACTTACATAA----------------------------------------------------TTTA.....................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.........................................................................................................TTTAACTAAACGCT--------------AGAAC-TA.....................................................................................................................................................................................................................................................................................................................................................2111.0011000
................................TTACAA-GACGACTTACATAA----------------------------------------------------T........................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
......................................................................................................................................................................................ATAG-T-------GA--CA--ATTGTGGCACCA-..........................................................................................................................................................................................................................................................................2111.0011000
................................................................................................................AAACGCT--------------AGAAC-TAAGGA-CT..............................................................................................................................................................................................................................................................................................................................................2011.0010001
...........................................................................................................................................TAAGGA-CTA--CA--TGAAATACT..............................................................................................................................................................................................................................................................................................................................2011.0011000
......CTAAATAATGA---TCGA----ACAATTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
...................................................................................................................................................................................................................................................................................................................T--ATA----------------------------------------ACACA----TATAAACA-----------GA-----TC............................................................................................2111.0011000
.......................................................................................................................................................................................................CA--ATTGTGGCACCA-T-----TGTA................................................................................................................................................................................................................................................................1911.0010001
...............................................................................................................................................................................................................................GTAAGATA---ATTCAATTCCATT...........................................................................................................................................................................................................................................2111.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................GA-----TCG-GGCTGCTCG----------AACATGG................................................................2111.0011000
..................................................................................................................................................................................................................CACCA-T-----TGTAAGATA---ATTCAA..................................................................................................................................................................................................................................................2111.0011000
...................................................................................................................................................................................................................................................................................................................................................................ACA----TATAAACA-----------GA-----TCG-GGCTG.....................................................................................2111.0010001
.....................CGA----ACAATTACAA-GACGACTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
........................................................................................................................................................................................AG-T-------GA--CA--ATTGTGGCACCA-T-----....................................................................................................................................................................................................................................................................2011.0011000
....................................................A----------------------------------------------------TTTAACTAAACGCT--------------AGAAC-TA.....................................................................................................................................................................................................................................................................................................................................................2211.0010010
dm3
T-AAAACTAAATAATGA---TCGA----ACAATTACAA-GACGACTTACATAA----------------------------------------------------TTTAACTAAACTCT--------------AGAAC-TAAGCG-CTA--CA--TGAAATACTT-----------CAAAGAATAG-T-------GA--CA--ATTGTGGCACCA-T-----TGTAAAATA---ATTCAATTCCATTAAAGATTCATG------ATTTTAAAATAATAATACCGCAAATTACATAGGTTTATA----T--ATA----------------------------------------ACACA----TATAAACA-----------GA-----TCG-GGCTGCTCG----------AACATGGAAATAGCT-----------------------GAAAAA--CTTTGGCAG---AATGCGA------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................TAAACTCT--------------AGAAC-TAAGCG-CT..............................................................................................................................................................................................................................................................................................................................................211505.0050500000000000000000000000000200000000002200000021102200000000000000000000000000000100000000000000000000000000400000000000000000000000010000001017110111213100000000000360010010010000410000020110316000013000000483410000210113363322202200000000000000000000001000000000000000000268500156901106111020001173252502002205032113031801000022721312600
..................................................................................................................................................................................AAGAATAG-T-------GA--CA--ATTGTGGC...............................................................................................................................................................................................................................................................................211154.001540000000000000000000000000000000000000000002020101000000000000000000000000000010010100000000000000000000000000000000000000000000000000000000000200000100020000000000300000000010000100010000000110000000000000001000100000010302211032100000001010010000000010000000001001000000120051701002210010000021518000050000102001100000101130957310
..............................................................................................................CTAAACTCT--------------AGAAC-TAAGCG-C...............................................................................................................................................................................................................................................................................................................................................211147.0014700000000000000000000000000000000000001000100100100000000000000000000000000000001000000100000000000000000000000000000000000000000000000100007423010220510001110001000000000000000011000000000101200000000000020030000000002000110030320000011010010000001110100000000041120000010000102003000000000035140100200100205305000200001322504300
....................................................................................................................TCT--------------AGAAC-TAAGCG-CTA--CA--TG.....................................................................................................................................................................................................................................................................................................................................211142.001420000000000000000000000000020000000000000102000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000020010020100000000004000000000000000000010011020010000000005002000001020201011103000000000000000000000001000100000000001000001280022101001000000000111207010000100201100110000000120223200
................................................................................................................AAACTCT--------------AGAAC-TAAGCG-CTA--...........................................................................................................................................................................................................................................................................................................................................21198.0098000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000010000000000000000010000000000024000000000000060000010020000000000100000000000000000000000000000000000000000000270072500001010000000025010000000000010003030000000000811000
............AATGA---TCGA----ACAATTACAA-GA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................21193.00930000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000010001140005010000000000000000000000000000000000000000003210022300000000000000031135000000000010000100000000000600000
.............................................................................................................ACTAAACTCT--------------AGAAC-TAAGCG-................................................................................................................................................................................................................................................................................................................................................21192.009200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021300525000100000000000621310000000000000000100000010000200000
..................................................................................................................ACTCT--------------AGAAC-TAAGCG-CTA--CA--.......................................................................................................................................................................................................................................................................................................................................21159.0059000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227003140000000000000001515000000000000000000000000000100000
.............................................................................................................................................................AAATACTT-----------CAAAGAATAG-T-------GA--...........................................................................................................................................................................................................................................................................................21155.005500000000000000000000000000000000000010000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000002000000210040010000000000000000000000001000000000000000013004150000000000000004821000000000001000000000000000100100
................................................................................................................................................................................CAAAGAATAG-T-------GA--CA--ATTGTG.................................................................................................................................................................................................................................................................................21153.005300000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000001000000000005000000000000000000000000000000200001000000000000000004000000000000000000000000000000000000000100000000000000005002500000000000000021411000010000000000000000001000012000
...................................................................................................................................................................................AGAATAG-T-------GA--CA--ATTGTGGCA..............................................................................................................................................................................................................................................................................21151.0051000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000000000000000000000000000000020100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000000000000000114002160000000000000001221000000000100000000010000010101000
................................TTACAA-GACGACTTACATAA----------------------------------------------------T........................................................................................................................................................................................................................................................................................................................................................................................21149.004900000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000014006270000100000000000400000000000001000010000000000000000
...............................................................................................................TAAACTCT--------------AGAAC-TAAGCG-CTA--...........................................................................................................................................................................................................................................................................................................................................22147.0047000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000310004140100000000000001712000000000000000000000000000000000
.....ACTAAATAATGA---TCGA----ACAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................21147.004700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000600000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000041700050000000000000002404000000000000000000000000000200000
.................................................................................................................................................................................AAAGAATAG-T-------GA--CA--ATTGTGG................................................................................................................................................................................................................................................................................21145.00450000000000000000000000000000000000000100000000000000010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000010000000000000000200210015000000000000000000000000001001000000000001500070000000100000000402000020000001000000010000000201000
...........................................................................................................................................................TGAAATACTT-----------CAAAGAATAG-T-------...............................................................................................................................................................................................................................................................................................21139.00390000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000110000000000000000000000000000100000000000000000000000001000000000100020110002000000000000000000000000110001000000000000000500140000100001000000211000010000000000010000000100003000
......CTAAATAATGA---TCGA----ACAATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................21137.00370000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000910000000000000000000000000000000000011013001000000000000000000000000000000000000000000000100030000000000100001211000000000001000000000000000312000
...AAACTAAATAATGA---TCGA----ACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................21136.00360000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001001011000000000000000000000010000000000000000000003800040000000000000001123000000000001000100000000000500000
..................................................................................................................ACTCT--------------AGAAC-TAAGCG-CTA--C..........................................................................................................................................................................................................................................................................................................................................20135.003500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012200000000000000002901000000000000000000000000000000000
...............................ATTACAA-GACGACTTACATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................20131.00310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000100180000000000000003510000000000000000020000000000101010
.......TAAATAATGA---TCGA----ACAATTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................21129.002900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001002110000000000000002424000001000000000000000000000100000
.........................................................................................................TTTAACTAAACTCT--------------AGAAC-TA.....................................................................................................................................................................................................................................................................................................................................................21129.00290000000000000000000000000000000000000000001100000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000050000000000000000000000000110000000000000020000000000020000001000000000000000000000000001000000000000000000000000020000000000000001601000010000000000000000000000100000
...............................................................................................................TAAACTCT--------------AGAAC-TAAGCG-C...............................................................................................................................................................................................................................................................................................................................................20128.002800000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100040000000000000000000000000001000000000000000000000000000000000000001000000000000000000000000000000000000000011000000000300110000000001000000101000000000000000000000000000100000
...........................................................................................................TAACTAAACTCT--------------AGAAC-TAAG...................................................................................................................................................................................................................................................................................................................................................21127.00270000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000010000000000000000000000000000010000000000000000000000000000000000000000000000000003400260000000000000003201000010000100000000000000000100000
T-AAAACTAAATAATGA---TCGA----A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................21127.002700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000011000000000000000000000000000000000000000000001500150000000000000000020000000000000000000000000000000000
....................................................................................................................................................................T-----------CAAAGAATAG-T-------GA--CA--ATTGT..................................................................................................................................................................................................................................................................................21126.00260000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000001500190000200000000000202000000000000000000000000000100000
.....................................................................................................................CT--------------AGAAC-TAAGCG-CTA--CA--TG.....................................................................................................................................................................................................................................................................................................................................20125.002500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000001000100000000000000000100000000000000001000000000000300000
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................................................................................................................................................................................CAAAGAATAG-T-------GA--CA--ATTGTGA................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000
...............................................................................................................................................CG-CTA--CA--TGAAATACTT-----------CAAAGA............................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................AAAGAATAG-T-------GA--CA--ATTGTG.................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000000000
....................TCGA----ACAATTACAA-GACGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
...AAACTAAATAATGA---TCGA----AC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................G-T-------GA--CA--ATTGTGGCACCA-T-----TG..................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................AACTCT--------------AGAAC-TAAGCG-CT..............................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................CAATTCCATTAAAGATTCATG------A.........................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TGGCACCA-T-----TGTAAAATA---ATT.....................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TACTT-----------CAAAGAATAG-T-------GA--CA--A......................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000000000
...........................................................................................................................................................TGAAATACTT-----------CAAAGAATAG-T-------A..............................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................ATAG-T-------GA--CA--ATTGTGGCACCA-T-----TGT.................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................T-----TGTAAAATA---ATTCAATTCCA.............................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................A--CA--ATTGTGGCACCA-T-----TGTA................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................AAACTCT--------------AGAAC-TAAGCG-CTT--...........................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................GTGGCACCA-T-----TGTAAAATA---AT......................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................ACA----TATAAACA-----------GA-----TCG-GGCTGC....................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................AAACTCT--------------AGAAC-TAAGCG-CTA--T..........................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TATAAACA-----------GA-----TCG-GGCTGCTCG----------.......................................................................2212.0020000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................TA--CA--TGAAATACTT-----------CAAAGAAT..........................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................TT-----------CAAAGAATAG-T-------GA--CA--ATT....................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
...............................ATTACAA-GACGACTTACATAA----------------------------------------------------A........................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000
............................................................................................................................................................GAAATACTT-----------CAAAGAATAG-T-------...............................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.........AATAATGA---TCGA----ACAATTAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
...........................................................................................................................................................TGAAATACTT-----------CAAAGAATAG-T-------G..............................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................CA--ATTGTGGCACCA-T-----TGTAAAA.............................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TA----------------------------------------ACACA----TATAAACA-----------GA-----TCG-GG........................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000001000000000000000000000000000000000000
...................................CAA-GACGACTTACATAA----------------------------------------------------TTT......................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000001000
........................................................................................................................................AC-TAAGCG-CTA--CA--TGAAATAC...............................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................T-----------CAAAGAATAG-T-------GA--CA--ATTGTG.................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................TTTAACTAAACTCT--------------AGAAC-TAA....................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
..............................................................................................................................................................AATACTT-----------CAAAGAATAG-T-------GA--CC--.......................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
.......................................................................................................................................................CA--TGAAATACTT-----------CAAAGA............................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TCG-GGCTGCTCG----------AACATGGAAATAGC.........................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................C-TAAGCG-CTA--CA--TGAAATAC...............................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AACA-----------GA-----TCG-GGCTGCTCG----------AAC....................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000
....................................AA-GACGACTTACATAA----------------------------------------------------TTTA.....................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
..................................................................................................................ACTCT--------------AGAAC-TAAGCG-CTA--CA--TG.....................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................TA--CA--TGAAATACTT-----------CAAAGA............................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
................A---TCGA----ACAATTACAA-GACGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................GTGGCACCA-T-----TGTAAAATA---A.......................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
....................TCGA----ACAATTACAA-GACGACTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
......................GA----ACAATTACAA-GACGACTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000000000
..............................................................................................................CTAAACTCT--------------AGAAC-TAAGCG-CC..............................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000
..............................................................................................................................................................AATACTT-----------CAAAGAATAG-T-------GA--...........................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000010000
........AAATAATGA---TCGA----ACAATTACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................................................................................................................................................GAAATACTT-----------CAAAGAATAG-T-------G..............................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000
T-AAAACTAAATAATGA---TCGA----AC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................ATACTT-----------CAAAGAATAG-T-------GA--...........................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
....AACTAAATAATGA---TCGA----ACAATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000000000000000000000000000
....AACTAAATAATGA---TCGA----ACACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
.............................................................................................................ACTAAACTCT--------------AGAAC-TAAGCG-T...............................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001000000000000000000000000000000000
..................................................TAA----------------------------------------------------TTTAACTAAACTCT--------------AGAAC-.......................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................CTAAACTCT--------------AGAAC-TAAGCG-CTA--...........................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATAAACA-----------GA-----TCG-GGCTGCTCG----------.......................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CTGCTCG----------AACATGGAAATAG..........................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................CCATTAAAGATTCATG------ATTTTA....................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CATGGAAATAGCT-----------------------GAAAAA--CTTT.....................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................AAAGAATAG-T-------GA--CA--ATTGTGGT...............................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................AG-T-------GA--CA--ATTGTGGCACCA-T-----....................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TTACAA-GACGACTTACATAA----------------------------------------------------TT.......................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................ACA-----------GA-----TCG-GGCTGCTCG----------AACA...................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
..........ATAATGA---TCGA----ACAATTACAA-G..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................CACCA-T-----TGTAAAATA---ATTCAA..................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AACA-----------GA-----TCG-GGCTGCTCG----------AACA...................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.......................................................................................................................................................CA--TGAAATACTT-----------CAAAGAATA.........................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TCG----------AACATGGAAATAGCT-----------------------GAA..............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TAAAATA---ATTCAATTCCATTA..........................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................ACTCT--------------AGAAC-TAAGCG-CTA--CA--A......................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------GAAAAA--CTTTGGCAG---AATGCG.......2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000
...........................................................................................................................................................TGAAATACTT-----------CAAAGAATAG-.......................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................CGACTTACATAA----------------------------------------------------TTTAACTAAA...............................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TAAATAATGA---TCGA----ACAATTAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................CATTAAAGATTCATG------ATTTTA....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CACA----TATAAACA-----------GA-----TCG-GGCTGCTCG----------AA.....................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AATAATGA---TCGA----ACAATTACAA-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AA-GACGACTTACATAA----------------------------------------------------TTTAA....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................ATTAAAGATTCATG------ATTTTAAA..................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
droEre2
T-AAAACTAAATAATGA---TCGA----ACAATTACAA-GACGACTTACATAA----------------------------------------------------ATTAACTAAACTCT--------------AGAAC-TAAGGA-CTA--CA--TGAAACACTT-----------CAAAGAATGG-T-------GA--CA--ATTCTGGCACCA-T-----TGTATAATA---ATTCAATTCCATTAAAGTTTCATG------ATTTTAAAATAATAATACCGCAAATTACATAAGTTTATA----T--ATA----------------------------------------ACACA----TATAAACA-----------GA-----TCG-GGCTGCTCG----------AACATGGAGAACGCT-----------------------GAAAAA--CTTTGGCAG---AATGCGA------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................ACA----TATAAACA-----------GA-----TCG-GGCTG.....................................................................................2113.0030000300
.....................................................................................................................................................................................................................................................................................................................................................................A----TATAAACA-----------GA-----TCG-GGCTGCT...................................................................................2113.0032000100
............................................................................................................................................................................................................................................................................................................................................................................TAAACA-----------GA-----TCG-GGCTGCTCG----------A......................................................................2112.0021000100
....................................................................................................................TCT--------------AGAAC-TAAGGA-CTA--CA--TG.....................................................................................................................................................................................................................................................................................................................................2112.0022000000
.............................................................................................................................................................................................................................................................................................................................................................................AAACA-----------GA-----TCG-GGCTGCTCG----------AA.....................................................................2112.0020000110
....AACTAAATAATGA---TCGA----ACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................TCG-GGCTGCTCG----------AACATGGAG..............................................................2111.0010000010
.................................................................................................................................................................................................................................................................................................................................................................ACACA----TATAAACA-----------GA-----TCG-GGC.......................................................................................2111.0010000010
...AAACTAAATAATGA---TCGA----ACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.................................................................................................................AACTCT--------------AGAAC-TAAGGA-CTA--...........................................................................................................................................................................................................................................................................................................................................2011.0011000000
...............................................................................................................TAAACTCT--------------AGAAC-TAAGGA-CT..............................................................................................................................................................................................................................................................................................................................................2111.0010000010
..AAAACTAAATAATGA---TCGA----AC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...................................................................................................................................................................TT-----------CAAAGAATGG-T-------GA--CA--ATTC...................................................................................................................................................................................................................................................................................2111.0011000000
................................................................................................................................................................................................................................................................................ATAATAATACCGCAAATTACA.............................................................................................................................................................................................2111.0011000000
.................................................................................................................................................................................AAAGAATGG-T-------GA--CA--ATTCTGG................................................................................................................................................................................................................................................................................2111.0010000100
............................................................................................................................................................................................................................................................................................................................................................................TAAACA-----------GA-----TCG-GGCTGCTCG----------AA.....................................................................2211.0010000010
..........ATAATGA---TCGA----ACAATTACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
..................................................................................................................................................................................................................................................................................................................................................................CACA----TATAAACA-----------GA-----TCG-GGCT......................................................................................2111.0011000000
............................................................................................................................................................................................................................................TCAATTCCATTAAAGTTTCAT.................................................................................................................................................................................................................................2111.0010000010
..............................AATTACAA-GACGACTTACATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.........................................................................................................ATTAACTAAACTCT--------------AGAAC-TA.....................................................................................................................................................................................................................................................................................................................................................2111.0011000000
............................................................................................................AACTAAACTCT--------------AGAAC-TAAGG..................................................................................................................................................................................................................................................................................................................................................2111.0010100000
.............................................................................................................................................................................................................................................................................................................................................................................AAACA-----------GA-----TCG-GGCTGCTCG----------A......................................................................2011.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................ATAAACA-----------GA-----TCG-GGCTGCT...................................................................................1911.0010000100
...........................................................................................................................................TAAGGA-CTA--CA--TGAAACACTT-----------..................................................................................................................................................................................................................................................................................................................2111.0011000000
droYak3
T-AAAACTAAATAATGA---TCGA----ACAATTACTA-GACGACTTACATAA----------------------------------------------------ATTAACTAAACTCT--------------AGAAC-TAAGGA-CTA--CA--TGAAATACTT-----------CAAAGAATAG-T-------GA--CA--ATTCTGGCACCA-T-----TGTAAAATA---ATTCAATTCCATTAAAGATTCATG------ATTTTAAAATAATAATACCGCAAATTACATAAGTTTATA----T--GTA----------------------------------------GCACA----TATAAACA-----------GT-----TCG-GGCTGCTCG----------AACATGGAAAACGCT-----------------------GAAAAA--CTTTGGCAG---AATGCGA------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................AATAG-T-------GA--CA--ATTCTGGCACC............................................................................................................................................................................................................................................................................2112.00202000000000
...............................................................................................................TAAACTCT--------------AGAAC-TAAGGA-CT..............................................................................................................................................................................................................................................................................................................................................2112.00200200000000
........................................................................................................................................................................................AG-T-------GA--CA--ATTCTGGCACCA-T-----T...................................................................................................................................................................................................................................................................2111.00100100000000
..............................................................................................................................................................................................................................TGTAAAATA---ATTCAATTCCAT............................................................................................................................................................................................................................................2111.00101000000000
....................................................................................................................................................................................GAATAG-T-------GA--CA--ATTCTGGCAC.............................................................................................................................................................................................................................................................................2111.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACGCT-----------------------GAAAAA--CTTTGG...................2011.00101000000000
......................GA----ACAATTACTA-GACGACTTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................TAAACA-----------GT-----TCG-GGCTGCTCG----------A......................................................................2111.00101000000000
..................................................TAA----------------------------------------------------ATTAACTAAACTCT--------------AGAAC-.......................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
......................................................................................................................................................................................ATAG-T-------GA--CA--ATTCTGGCACCA-..........................................................................................................................................................................................................................................................................2111.00101000000000
.........................................................................................................................................................................................G-T-------GA--CA--ATTCTGGCACCA-T-----TG..................................................................................................................................................................................................................................................................2111.00101000000000
...............................ATTACTA-GACGACTTACATAA----------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
....................................................A----------------------------------------------------ATTAACTAAACTCT--------------AGAAC-.......................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
...............................................................................................................................................GA-CTA--CA--TGAAATACTT-----------CAAAGAATAG-T-------...............................................................................................................................................................................................................................................................................................2811.00101000000000
droEug1
T-AAAACTAATTAATGA---TCGA----ACAATTACAA-G---ACTTACACAA----------------------------------------------------ATTAACTAAATTCT--------------AAAACGTAAGGA-CTA--CA--TGAAATACTT-----------TGAAAAATAG-T-------GA--CA--ATTGTGGCACCA-T-----TGTAAAATG---ATTCAATTCCATTAAAGATTCATG------ATTTTAAAATAATAATACCGCAAATTACAATAGTTTATA----T--ATA----------------------------------------ACAGA----TATAAATA-----------GA-----TCG-GGCTGCTGG----------AACATGAAAAAAGCT-----------------------GAAACA--CTTTGGCAG---AATGCGA------SizeHit CountTotal NormTotal
No Reads
droBia1
T-AAAACTAATTAATGA---TCGA----ACAATTACAA-GACGACTTACATAA----------------------------------------------------GTTAACTAAAGCCT--------------AGAACGTAAGGA-CTA--CA--TTAAATACTT-----------TAGAAAATAG-T-------GA--CA--ATCTAGGCACCA-C-----TGTAAACTG---ATTCAATTCCATTAAAGATTCATG------TTTTTAAAATAATAATACCGCAAATTACACGAGTTTATA----T--ATA----ATA---------------------------------GGACA----TATAAACA-----------GA-----TGGGGGCTGCTAG----------AGCATGGAAAAAGCT---------------GAAACGCTGAAACA--CTTTGGCAG---AATGCGA------SizeHit CountTotal NormTotal
No Reads
droTak1
T-AAAACTAATTAATGA---TCGA----ACAATTACGACGACGACTTACATAA----------------------------------------------------ATTAACTAAAGCCT--------------AGAACGTAAGGA-CTA--CA--TGAAATACTT-----------TAGAAAATAG-T-------GA--CA--ATTGTGGCACCA-T-----TGTAAAATG---ATTCAATTCCATTAAAGATTCATG------ATTTTAAAATAATAATACCGCAAATTACACAAGTTCATA----TGTATA----------------------------------------ACACA----TATAAACA-----------GA-----TCGGGGCTGCTGGAGCATTG--GAACATGGAGTAAGCT-----------------------GAAACA--CTTTGGCAG---AATGCGA------SizeHit CountTotal NormTotal
No Reads
droEle1
T-ACAACTAATTAATGA---TCGA----ACAATTACAT-GGCGACTTACATAA----------------------------------------------------ATTAACTAAGTTCT--------------AGAACGTAAGGA-CTA--CA--TGAAATACTT-----------CAGAAGATAG-T-------GA--CA--GTTGTGGCACCA-T-----TGTAAAATGAT-ATTCAATTCCATTAAAGTTTCATG------ATTTTAAAATAATAATACCGCAAATAACACAAGTTTATA----T--ACA----------------------------------------ACACA----TATAAACA-----------GA-----TCG-GGCTGCTGG----------AACATGGAAAAATCT-----------------------GAAACA--CTTTGGCAG---AATGCGA------SizeHit CountTotal NormTotal
No Reads
droRho1
T-AAAACTAATTAATGA---TCGA----ACAATTACAA-GACGACTTACATAA----------------------------------------------------ATTAACTAAATTCT--------------AGAACGTAAGGA-CTA--CA--TGAAATACTT-----------CAGAAAATAG-T-------GA--CA--ATTGTGGCACCA-T-----TGTAAAATG---ATTCAATTCCATTAAAGTTTCATG------TTTTTAAAATAATAATACCGCAAATTACACATGTTTATA----T--ATA----------------------------------------ACACA------TAAACA-----------GA-----TCG-GGCTGCTGG----------AACATGAAAAAAGCA-----------------------GAAACA--CTTTGGCAG---AATGCGA------SizeHit CountTotal NormTotal
No Reads
droFic1
T-AAAACTAATTAATGA---TCGA----AGGATTACAA-CACGACTTACATAA----------------------------------------------------ATTAACTAAATTCT--------------AGAACGTAAGGA-CTA--CA--TGAAATACTT-----------TAGAAAATAG-T-------GA--CA--ATAGTGGCACCA-T-----TGTAAAATG---ATTCAATTCCATTAAAGATTCATG------TTTTTAAAATAATAATACCGCAAATTACATTGGTTTATA----C--AAT----------------------------------------ACACA----TATAAACA-----------GA-----TCG-GGCTGCTGG----------AACATGGAGAAAGCA-----------------------AAAACA--CTTTGGCAG---AATGCGA------SizeHit CountTotal NormTotal
No Reads
droKik1
T-ACAACTAATTAATGA---TCGA----ACAACTAAGA-GACGACTTACATAA----------------------------------------------------ATTAGC-------T--------------AGAACGTAAGAA-CTA--CA--TGAAATACTT-----------TAGAGAATAG-C-------G---CA--ATGGTTGCGCCC-G-----TGTAAAATGATTATTCAATTCCATTAAAGATTCATG-------TTTTAAAATAATAATACCGCAGATTACGTAAGTTTATA----T--ATA----------------------------------------ACACATGTGTATAAACC-----------GT-----TCA-GGCTGCTGA------------------------C-----------------------GAAACA--CTTTGGCAG---AATGCGA------SizeHit CountTotal NormTotal
No Reads
droAna3
T-AAAACTAATTAATGA---TCAA----ACAATTACAA-GACGGCTTATATAA----------------------------------------------------ATTAGCTAAGTTCT--------------AGAACGTAAGGA-CTA--CA--CGAAATACTT-----------GCGAGAACAG-T-------GA--CAGAGTTGTGGCACCG-TTT---TGTAAAATG---ATTCAATTCCATTAAAGATTCATGATTCGAATTTAAAAATAATAATACCTCTAATTACATAAGCCTATG----T--AAT--------------------------------------------C----TACAGACG-----------CGTCTG-TGG-GGC---------ACTGCTGAACGGGG----------------------------------AAA--CTTTGGCAG---AATGC--------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................ACAG-T-------GA--CAGAGTTGTGGCAC.............................................................................................................................................................................................................................................................................21114.00141130000
....................................................................................................................................................................T-----------GCGAGAACAG-T-------GA--CAGAGTT....................................................................................................................................................................................................................................................................................2116.006011022
..................................................................................................................................................CTA--CA--CGAAATACTT-----------GCGAGA............................................................................................................................................................................................................................................................................................................2113.003111000
.....................................................................................................................................................................................AACAG-T-------GA--CAGAGTTGTGGC...............................................................................................................................................................................................................................................................................2013.003001110
......................................................................................................................................................................................ACAG-T-------GA--CAGAGTTGTGGCA..............................................................................................................................................................................................................................................................................2013.003100011
.....................................................................................................................................................................................AACAG-T-------GA--CAGAGTTGTGG................................................................................................................................................................................................................................................................................1912.002110000
...............................................................................................................................................................................................................................GTAAAATG---ATTCAATTCCATT...........................................................................................................................................................................................................................................2112.002020000
.....................................................................................................................................................................................AACAG-T-------GA--CAGAGTTGTGGCA..............................................................................................................................................................................................................................................................................2112.002010001
........................................................................................................................................................A--CGAAATACTT-----------GCGAGAACA.........................................................................................................................................................................................................................................................................................................2012.002110000
...........................................................................................................................................................................................T-------GA--CAGAGTTGTGGCACCG-TT........................................................................................................................................................................................................................................................................2112.002110000
...................................................................................................................................................................TT-----------GCGAGAACAG-T-------GA--CAGAGT.....................................................................................................................................................................................................................................................................................2112.002100001
.......................................................................................................................................................................................CAG-T-------GA--CAGAGTTGTGGCACC............................................................................................................................................................................................................................................................................2112.002020000
......................................................................................................................................................................................ACAG-T-------GA--CAGAGTTGTGGC...............................................................................................................................................................................................................................................................................1912.002010001
....................................................................................................................................................................................................A--CAGAGTTGTGGCACCG-TTT---T...................................................................................................................................................................................................................................................................2112.002010001
..............................................................................................................................................................................................................................................AATTCCATTAAAGATTCATGA...............................................................................................................................................................................................................................2112.002110000
....................................................................................................................................................................................GAACAG-T-------GA--CAGAGTTGTGGC...............................................................................................................................................................................................................................................................................2112.002011000
.......................................................................................................................................................................................................CAGAGTTGTGGCACCG-TTT---TG..................................................................................................................................................................................................................................................................2112.002200000
...........................................................................................................................................................CGAAATACTT-----------GCGAGAACAG-C-------...............................................................................................................................................................................................................................................................................................2111.001010000
...................................................................................................................................................TA--CA--CGAAATACTT-----------GCGAGA............................................................................................................................................................................................................................................................................................................2011.001000010
.................................................................................................................................................................................CGAGAACAG-T-------GA--CAGAGTTGT..................................................................................................................................................................................................................................................................................2111.001000010
.............ATGA---TCAA----ACAATTACAA-GAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
...........................................................................................................................................................................................T-------GA--CAGAGTTGTGGCACCG-TC........................................................................................................................................................................................................................................................................2111.001010000
.......................................................................................................................................................................................................CAGAGTTGTGGCACCG-TTT---TGG.................................................................................................................................................................................................................................................................2211.001100000
....................TCAA----ACAATTACAA-GACGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...........................................................................................................................................................CGAAATACTT-----------GCGAGAACAG-T-------...............................................................................................................................................................................................................................................................................................2111.001010000
.............................................................................................................................................................................................................TGTGGCACCG-TTT---TGTAAAAT............................................................................................................................................................................................................................................................2111.001100000
..................................................................................................................................................................CTT-----------GCGAGAACAG-T-------GA--CAGAGT.....................................................................................................................................................................................................................................................................................2211.001010000
..................................................................................................................................................................................GAGAACAG-T-------GA--CAGAGTTGTG.................................................................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................G-GGC---------ACTGCTGAACGGGG----------------------------------A.............................1911.001100000
....................................................................................................................................................................................................................................ATG---ATTCAATTCCATTAAAGA......................................................................................................................................................................................................................................2111.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CGGGG----------------------------------AAA--CTTTGGCAG---AATG.........2111.001100000
................................................................................................................................................................................................................................................................................................................................................................................CG-----------CGTCTG-TGG-GGC---------ACTGC.........................................................................1911.001100000
...................................................................................................................................................................................AGAACAG-T-------GA--CAGAGTTGTGG................................................................................................................................................................................................................................................................................2111.001010000
................................................................................................................................................................................GCGAGAACAG-T-------GA--CAGAGTTG...................................................................................................................................................................................................................................................................................2111.001000001
..............TGA---TCAA----ACAATTACAA-GAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
......................................................................................................................................................................................ACAG-T-------GA--CAGAGTTGTGG................................................................................................................................................................................................................................................................................1811.001100000
....................................................................................................................................................................................GAACAG-T-------GA--CAGAGTTGTGGCT..............................................................................................................................................................................................................................................................................2211.001000001
..............................................................................................................................................................AATACTT-----------GCGAGAACAG-T-------GA--C..........................................................................................................................................................................................................................................................................................2111.001000010
...............................................................................................................TAAGTTCT--------------AGAACGTAAGGA-CT..............................................................................................................................................................................................................................................................................................................................................2211.001000010
......................................................................................................................T--------------AGAACGTAAGGA-CTA--CA--CG.....................................................................................................................................................................................................................................................................................................................................2011.001100000
.......................................................................................................................................................CA--CGAAATACTT-----------GCGAGAACA.........................................................................................................................................................................................................................................................................................................2111.001010000
......................................................................................................................T--------------AGAACGTAAGGA-CTA--CA--C......................................................................................................................................................................................................................................................................................................................................1911.001010000
..........................................................................................................TTAGCTAAGTTCT--------------AGAACGTA.....................................................................................................................................................................................................................................................................................................................................................2111.001000001
........................................................................................................................................................................................AG-T-------GA--CAGAGTTGTGGCACCG-..........................................................................................................................................................................................................................................................................2111.001100000
.......................................................................................................................................................................................CAG-T-------GA--CAGAGTTGTGGCAC.............................................................................................................................................................................................................................................................................2011.001100000
...............................................................................................................TAAGTTCT--------------AGAACGTAAGGA-................................................................................................................................................................................................................................................................................................................................................2011.001000010
..AAAACTAATTAATGA---TCAA----AC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..........................................................................................................................................................................................................................................................................................................CTATG----T--AAT--------------------------------------------C----TACAGACG-----------CGT..................................................................................................2111.001000010
....................................................................................................................................................A--CA--CGAAATACTT-----------GCGAGAAC..........................................................................................................................................................................................................................................................................................................2111.001010000
.........................................................................................................ATTAGCTAAGTTCT--------------AGAACGT......................................................................................................................................................................................................................................................................................................................................................2111.001010000
.........................................................................................................................................................................................................GAGTTGTGGCACCG-TTT---TGTAA...............................................................................................................................................................................................................................................................2211.001000001
..........................................................................................................................................................................................................................................................................................CTCTAATTACATAAGCCTATG----...............................................................................................................................................................................2111.001100000
..............TGA---TCAA----ACAATTACAA-GACGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.....................................................................................................................................................................................AACAG-T-------GA--CAGAGTTGTGGCAC.............................................................................................................................................................................................................................................................................2211.001010000
droBip1
T-AAAACTAATTAATGA---TCAA----ACAATTACAA-GACGGCTTATATAA----------------------------------------------------ATTAGCTAAGTTCT--------------AGAACGTAAGGA-CTA--CA--TGAAATACTT-----------GCGAGAACAG-T-------GA--CAAAGTTGTGGCACCA-TTT---TGTAAAATG---ATTCAATTCCATTAAAGATTCATG------AT-TTAAAATAATAATACCTCAAATTACATAAGACTATG----T--AAT--------------------------------------------C----TACAGACG-----------CATCTG-TGGGGACTGCTGT------------CGGGG---AATCA---------------G-------GGAGAA--CTTTGGCAG---AATGCGAGAACGCSizeHit CountTotal NormTotal
No Reads
dp5
T-AAAACACAATAATGA---TGGATGGGACACTTACAT-GG-----TACATAA----------------------------------------------------TTTAACTAATTTCT--------------AGAACGTAAGGATCTAACCA--GGAAATATGT-----------GT-------------------------------GTACTC-T-----AAGAAAACT---ATTCAATTCCATTCAAGATTCGTG------AT-TAAACATAATAATACCGCGAATTACATG--TATAAA----T--ATA-------AGAA-T------ATAAATAAAGACAAGCACCGCACACA----TATCA---TATGGTACACAGATCGGTTTG-GGCTGCTATAAC--------ACATGGAAAAAGCT---------------T-------GGAACA---TTTGGCAGAGAAATGCGA------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................TGGATGGGACACTTACAT-GG-----....................................................................................................................................................................................................................................................................................................................................................................................................................................................2017.0070400000030
......................................................................................................................................GAACGTAAGGATCTAACCA--GG.....................................................................................................................................................................................................................................................................................................................................2117.0070700000000
................................................................................................................AATTTCT--------------AGAACGTAAGGATC...............................................................................................................................................................................................................................................................................................................................................2115.0050200000030
..............................................................................................................................................................................................................................................AATTCCATTCAAGATTCGTG------A.........................................................................................................................................................................................................................2115.0050400001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAGCT---------------T-------GGAACA---TTTGGC..................2114.0040400000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTG-GGCTGCTATAAC--------ACATGG................................................................2114.0040200000200
........CAATAATGA---TGGATGGGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0041201000000
......................GATGGGACACTTACAT-GG-----TAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040300001000
.............................................................................................................................................................................................................................................CAATTCCATTCAAGATTCGTG------..........................................................................................................................................................................................................................2114.0040400000000
.......ACAATAATGA---TGGATGGGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030200000100
...........................................................................................................................................................................................................................................................................................................................................................................ATCA---TATGGTACACAGATCGG...............................................................................................2113.0030200000010
...............................................................................................................................................................................................................................................ATTCCATTCAAGATTCGTG------AT-.......................................................................................................................................................................................................................2113.0030200001000
......................................................................................................................................GAACGTAAGGATCTAACCA--G......................................................................................................................................................................................................................................................................................................................................2013.0030300000000
..............................................................................................................................................................................................................................AAGAAAACT---ATTCAATTCCAT............................................................................................................................................................................................................................................2113.0030200000010
.......ACAATAATGA---TGGATGGGACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030200001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCT---------------T-------GGAACA---TTTGGCA.................2113.0030300000000
................................................................................................................................................................TATGT-----------GT-------------------------------GTACTC-T-----AAGAAAA.............................................................................................................................................................................................................................................................2113.0030000000030
........................................................................................................................................................................................................................................................................AT-TAAACATAATAATACCGCG....................................................................................................................................................................................................2112.0020200000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCT---------------T-------GGAACA---TTTGGC..................1912.0020200000000
......................................................................................................................................................................................................................................T---ATTCAATTCCATTCAAGATT....................................................................................................................................................................................................................................2112.0020200000000
..................................................................................................................TTTCT--------------AGAACGTAAGGATCTA.............................................................................................................................................................................................................................................................................................................................................2112.0020200000000
....................................................................................................................................................................T-----------GT-------------------------------GTACTC-T-----AAGAAAACT---AT......................................................................................................................................................................................................................................................2112.0020100000010
.......................................................................................................................................................................................................................................................CAAGATTCGTG------AT-TAAACATA...............................................................................................................................................................................................................2112.0021000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAAGCT---------------T-------GGAACA---TTTGG...................2112.0020100000010
...AAACACAATAATGA---TGGATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020100000010
..............................................................................................................................................................................................................................................................................................................................................................................A---TATGGTACACAGATCGGTTT............................................................................................2112.0020200000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCT---------------T-------GGAACA---TTTGG...................1812.0020000000020
....AACACAATAATGA---TGGATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------T-------GGAACA---TTTGGCAGAGAA............2012.0020200000000
........................TGGGACACTTACAT-GG-----TACAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATAAC--------ACATGGAAAAAGCT---------------T-------G................................2112.0020200000000
...........................................................................................................................................TAAGGATCTAACCA--GGAAATA................................................................................................................................................................................................................................................................................................................................2112.0020000000020
...................................................................................................................................................................................................................................................................................ATAATACCGCGAATTACATG--T........................................................................................................................................................................................2112.0020000000020
.................................................................................................................................................................................................................................................................................................................................................TAAAGACAAGCACCGCACACA----........................................................................................................................2112.0020200000000
.......................................................................................................................................................CA--GGAAATATGT-----------GT-------------------------------GTACTC-T-----....................................................................................................................................................................................................................................................................2112.0020000000020
.......................ATGGGACACTTACAT-GG-----TACA................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
.........................................................................................................................................................................................................................................................................................................................................................................................CACAGATCGGTTTG-GGCTGCT...................................................................................2112.0020200000000
..............................................................................................................CTAATTTCT--------------AGAACGTAAGG..................................................................................................................................................................................................................................................................................................................................................2012.0020100000010
...............................................................................................................TAATTTCT--------------AGAACGTAAGGAT................................................................................................................................................................................................................................................................................................................................................2112.0020100001000
..............................................................................................................................................................................................................................................................................................................................................................................A---TATGGTACACAGATCGGTTTG-..........................................................................................2212.0020000000200
................A---TGGATGGGACACTTACAT-GG-----....................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020100000010
.................................................................................................................ATTTCT--------------AGAACGTAAGGATC...............................................................................................................................................................................................................................................................................................................................................2012.0020000000020
.....ACACAATAATGA---TGGATGGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020100001000
........CAATAATGA---TGGATGGGACAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020100000010
........CAATAATGA---TGGATGGGACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020200000000
........................................................................................................................................................A--GGAAATATGT-----------GT-------------------------------GTACTC-T-----....................................................................................................................................................................................................................................................................2012.0020100000010
................................................................................................................................................................................................................................................TTCCATTCAAGATTCGTG------AT-T......................................................................................................................................................................................................................2112.0020200000000
.................................................................................................................................................TCTAACCA--GGAAATATGT-----------GT-------------------------------G................................................................................................................................................................................................................................................................................2112.0020000000020
....................................................................................................................................................................................................................................................................................................................................................................................TGGTACACAGATCGGTTTG-GG........................................................................................2112.0020000001010
..........................................................................................................................................................................................................................................................................................................................................................................................ACAGATCGGTTTG-GGCTGCT...................................................................................2012.0020100000100
...........................................................................................................................................................................................................................................TTCAATTCCATTCAAGATTCG..................................................................................................................................................................................................................................2112.0020100010000
.........................................................................................................................................................................................................................................................................T-TAAACATAATAATACCGCG....................................................................................................................................................................................................2012.0020200000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TATAAC--------ACATGGAAAAAGCT---------------T-------.................................2112.0020200000000
....AACACAATAATGA---TGGATGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
........................................................................................................................................ACGTAAGGATCTAACCA--GGT....................................................................................................................................................................................................................................................................................................................................2011.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................GTACACAGATCGGTTTG-GGC.......................................................................................2011.0010000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCT---------------T-------GGAACA---TTTGGCAT................2211.0010100000000
....AACACAATAATGA---TGGATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000000
.................................................................................................................ATTTCT--------------AGAACGTAAGGATCT..............................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........TAATGA---TGGATGGGACACTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000010
T-AAAACACAATAATGA---TGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................AAGGATCTAACCA--GGAAATAA...............................................................................................................................................................................................................................................................................................................................2111.0010000000010
............................................................................................................AACTAATTTCT--------------AGAACGTAA....................................................................................................................................................................................................................................................................................................................................................2011.0010000000010
.............................................................................................................................................................AAATATGT-----------GT-------------------------------GTACTC-T-----AAGA................................................................................................................................................................................................................................................................2111.0010100000000
.................................................................................................................................................................................................................................................................................................TACATG--TATAAA----T--ATA-------AGAA-T------......................................................................................................................................................2111.0010100000000
..............................................................................................................................................................AATATGT-----------GT-------------------------------GTACTC-T-----AAGAA...............................................................................................................................................................................................................................................................2111.0010000000010
............AATGA---TGGATGGGACACTTAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................AACGTAAGGATCTAACCA--GG.....................................................................................................................................................................................................................................................................................................................................2011.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................TAAC--------ACATGGAAAAAGCT---------------T-------GG...............................2111.0010100000000
....................................................................................................................TCT--------------AGAACGTAAGGATCTAAC...........................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................AACGTAAGGATCTAACCA--GGA....................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCT---------------T-------GGAACA---TTTGGCA.................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................AA-T------ATAAATAAAGACAAGC......................................................................................................................................1911.0010000000010
...........................................................................................................................................................................................................................................................................TAAACATAATAATACCGCGAA..................................................................................................................................................................................................2111.0010000001000
..............................................................................................................................................................................................................................................AATTCCATTCAAGATTCGTG------..........................................................................................................................................................................................................................2011.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GCT---------------T-------GGAACA---TTTGGCAGAGAAATG.........2511.0010000000010
.................................................................................................................................................................ATGT-----------GT-------------------------------GTACTC-T-----AAGAAAAC............................................................................................................................................................................................................................................................2111.0010100000000
......................................................................................................................................GAACGTAAGGATCTAACCA--GGT....................................................................................................................................................................................................................................................................................................................................2211.0010000001000
....................................................A----------------------------------------------------TTTAACTAATTTCT--------------AGAACGA......................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
....................................................................................................................TCT--------------AGAACGTAAGGATCTAA............................................................................................................................................................................................................................................................................................................................................2011.0010000000010
.................................................................................................................................................................................................................................................................................................................................................................................................GGTTTG-GGCTGCTATAAC--------AC....................................................................2011.0010100000000
....................................................................................................................................................................................................................................................................................TAATACCGCGAATTACATG--TA.......................................................................................................................................................................................2111.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................GGTACACAGATCGGTTTG-G.........................................................................................1911.0010000001000
...................................................................................................................................................................................................................................................................................................................................A-T------ATAAATAAAGACAAGCACC...................................................................................................................................2111.0010000000100
...........TAATGA---TGGATGGGACACTTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000010
........................................................................................................................................................................................................................T-----AAGAAAACT---ATTCAATTCCA.............................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................AAAGACAAGCACCGCACACA----T.......................................................................................................................2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................GTACACAGATCGGTTTG-GGCT......................................................................................2111.0011000000000
............................................................................................................AACTAATTTCT--------------AGAACGTAAG...................................................................................................................................................................................................................................................................................................................................................2111.0010000000100
....................TGGATGGGACACTTACAT-GG-----T...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000010
.........AATAATGA---TGGATGGGACAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
................................................................................................................AATTTCT--------------AGAACGTAAGGATCC..............................................................................................................................................................................................................................................................................................................................................2211.0010000000010
..............................................................................................................................................................AATATGT-----------GT-------------------------------GTACTC-T-----AAGAAA..............................................................................................................................................................................................................................................................2211.0010100000000
.....................................................................................................................................................................................................................................................................................................................................T------ATAAATAAAGACAAGCACCG..................................................................................................................................2111.0010100000000
...................................................................................................................................................TAACCA--GGAAATATGT-----------GT-------------------------------GTA..............................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................................................................................................................ATTCAATTCCATTCAAGATTC...................................................................................................................................................................................................................................2111.0010100000000
.....................................................................................................................................AGAACGTAAGGATCTAACCA--G......................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................CTAACCA--GGAAATATGT-----------GT-------------------------------GT...............................................................................................................................................................................................................................................................................2111.0010000001000
.............................................................................................................................................AGGATCTAACCA--GGAAATATG..............................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---TTTGGCAGAGAAATGC........1911.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCT---------------T-------GGAACA---TTTGGC..................2011.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTTG-GGCTGCTATAAC--------ACATG.................................................................2111.0010100000000
...................................................................................................................................................................................................................................AACT---ATTCAATTCCATTCAAG.......................................................................................................................................................................................................................................2111.0010100000000
.....ACACAATAATGA---TGGATGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................................TAAATAAAGACAAGCACCGCAA...............................................................................................................................2211.0010100000000
....................TGGATGGGACACTTACAT-GG-----TC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000010
.....ACACAATAATGA---TGGATGGGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
................................................................................................................................................ATCTAACCA--GGAAATATGT-----------G.................................................................................................................................................................................................................................................................................................................2011.0010000001000
..............TGA---TGGATGGGACACTTACAT-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................AC--------ACATGGAAAAAGCT---------------T-------GGAAC............................2211.0010100000000
....AACACAATAATGA---TGGATGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.................................................................................................................................................................................................................................................................G------AT-TAAACATAATAATACCGC.....................................................................................................................................................................................................2111.0010100000000
...............................................................................................................TAATTTCT--------------AGAACGTAAGG..................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
........................................................................................................................................................................................................................................................................AT-TAAACATAATAATACCGC.....................................................................................................................................................................................................2011.0010100000000
.............................................................................................................................................................................................................................................................................AACATAATAATACCGCGAAT.................................................................................................................................................................................................2011.0010000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................TG-GGCTGCTATAAC--------ACATGGA...............................................................2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................GTACACAGATCGGTTTG-GG........................................................................................1911.0010100000000
..........ATAATGA---TGGATGGGACACTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCT---------------T-------GGAACA---TTTGGCAGA...............2111.0010100000000
..................................................................................................................................................................................................................................................CCATTCAAGATTCGTG------AT-TAA....................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................TAACTAATTTCT--------------AGAACGTAA....................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
..................................................................................................................................................................................................................................................CCATTCAAGATTCGTG------AT-TAAAA..................................................................................................................................................................................................................2311.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------GGAACA---TTTGGCAGAGAAAA..........2111.0010000001000
..........................................................................................................................................................................................................................................................................................................................................................................................ACAGATCGGTTTG-GGCTGCTA..................................................................................2111.0010100000000
...............GA---TGGATGGGACACTTACAT-G..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................ACATGGAAAAAGCT---------------T-------GGAAC............................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................................TAAATAAAGACAAGCACCGCA................................................................................................................................2111.0010100000000
..........................................................................................................................................GTAAGGATCTAACCA--GGAAAT.................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.................................................................................................................................................................................................................................................................................TAATAATACCGCGAATTACAT............................................................................................................................................................................................2111.0010100000000
.............................................................................................................................................................................................................................................CAATTCCATTCAAGATTCGTG------AT-.......................................................................................................................................................................................................................2311.0010100000000
........................................................................................................................................................A--GGAAATATGT-----------GT-------------------------------GTACTC-T-----A...................................................................................................................................................................................................................................................................2111.0010000000010
.......................ATGGGACACTTACAT-GG-----TAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
......CACAATAATGA---TGGATGGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................................................................................................................................................................................................T-----AAGAAAACT---ATTCAATTCC..............................................................................................................................................................................................................................................2011.0010100000000
..........................................................................................................................................GTAAGGATCTAACCA--GGAAA..................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........TAATGA---TGGATGGGACACTTAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000010
.........AATAATGA---TGGATGGGACACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................CAGATCGGTTTG-GGCTGCTA..................................................................................2011.0010100000000
.......................................................................................................................................................................................................................................................CAAGATTCGTG------AT-TAAACATAA..............................................................................................................................................................................................................2211.0010100000000
.........................................................................................................................................CGTAAGGATCTAACCA--GGAAA..................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................CA--GGAAATATGT-----------GT-------------------------------GTACTC-..........................................................................................................................................................................................................................................................................2011.0010000001000
.......................................................................................................................................................................................................................................................................................................................................................................................TACACAGATCGGTTTG-GGCTG.....................................................................................2111.0010100000000
.......................................................................................................................................................CA--GGAAATATGT-----------GT-------------------------------GTACTC-T-----A...................................................................................................................................................................................................................................................................2211.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................CGGTTTG-GGCTGCTATAAC--------......................................................................1911.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................TACACAGATCGGTTTG-GTT.......................................................................................1920.5011000000000
droPer2
T-AAAACACAATAATGA---TGGATGGGACACTTACAC-GG-----TACATAA----------------------------------------------------TTTAACTAATTTCT--------------AGAACGTAAGGATCTAACCA--GGAAATATGT-----------GT-------------------------------GTACTC-T-----AAGAAAACT---ATTCAATTCCATTCAAGATTCGTG------AT-TAAACATAATAATACCGCGAATTACATG--TATAAA----T--ATA-------AGAA-T------ATAAATAAAGACAAGCACCGCACACA----TATCA---TATGGTACACAGATCGGTTTG-GGCTGCTATAAC--------ACATGGAAAAAGCT---------------T-------GGAACA---TTTGGCAGAGAAATGCGA------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................GTACACAGATCGGTTTG-GGCT......................................................................................2113.003200010
....AACACAATAATGA---TGGATGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003030000
..................................................................................................................................................................TGT-----------GT-------------------------------GTACTC-T-----AAGAAAACT---........................................................................................................................................................................................................................................................2113.003300000
...................................................................................................................................................TAACCA--GGAAATATGT-----------GT-------------------------------GTA..............................................................................................................................................................................................................................................................................2112.002000002
......................................................................................................................................................................................................................................T---ATTCAATTCCATTCAAGATT....................................................................................................................................................................................................................................2111.001000100
...AAACACAATAATGA---TGGATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.........................................................................................................................................CGTAAGGATCTAACCA--GGAAA..................................................................................................................................................................................................................................................................................................................................2111.001010000
.....................................................................................................................................AGAACGTAAGGATCTAACCA--G......................................................................................................................................................................................................................................................................................................................................2111.001010000
.....ACACAATAATGA---TGGATGGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.........................................................................................................TTTAACTAATTTCT--------------AGAACGT......................................................................................................................................................................................................................................................................................................................................................2111.001010000
.......ACAATAATGA---TGGATGGGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
...................................................................................................................................................................................................................................................................................................................................................................................ATGGTACACAGATCGGTTT............................................................................................1911.001010000
................A---TGGATGGGACACTTACAC-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
........................................................................................................................................................................................................................................................................................................................................................................................ACACAGATCGGTTTG-GGCTG.....................................................................................2011.001000010
...............................................................................................................TAATTTCT--------------AGAACGTAAGGATA...............................................................................................................................................................................................................................................................................................................................................2211.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................ACAGATCGGTTTG-GGCTGCT...................................................................................2011.001100000
................A---TGGATGGGACACTTACAC-GG-----....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
................................................................................................................AATTTCT--------------AGAACGTAAGGATC...............................................................................................................................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................................................................................................................................TCAAGATTCGTG------AT-TAAACAT................................................................................................................................................................................................................2111.001000001
..................................................................................................................TTTCT--------------AGAACGTAAGGATCTA.............................................................................................................................................................................................................................................................................................................................................2111.001010000
...........................................................................................................................................................................................................................................................................................................................................................................ATCA---TATGGTACACAGATCGG...............................................................................................2111.001010000
...................................................................................................................TTCT--------------AGAACGTAAGGATCTAA............................................................................................................................................................................................................................................................................................................................................2111.001010000
..........................................................................................................TTAACTAATTTCT--------------AGAACGTAAGGA.................................................................................................................................................................................................................................................................................................................................................2511.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CATGGAAAAAGCT---------------T-------GGAACA---T.......................2111.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CT---------------T-------GGAACA---TTTGGCAGAGA.............2011.001000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCT---------------T-------GGAACA---TTTGGCAG................2111.001010000
..................................................................................................................................................................................................................................................CCATTCAAGATTCGTG------AT-TA.....................................................................................................................................................................................................................2011.001000010
..............................................................................................................CTAATTTCT--------------AGAACGTAAGGA.................................................................................................................................................................................................................................................................................................................................................2111.001000001
.............................................................................................................................................................................................................................................CAATTCCATTCAAGATTCGTG------A.........................................................................................................................................................................................................................2211.001010000
droWil2
T-ATAACTAATTAATAATGATCAA----ACTC---------------ACATAAATATCTACAAACTATACATATATATATATTTTTAGGAGAAATAA--------AGCTACTTAAAACAAGATCTAACATACAATACAATAAAGA-CTA--CAA-TGAAATACTTTTTCTTTTTTTTCGAGAATAT-TTTGTGGACACAATAAATTGTTGCACCCATTTTGTTTTTAGGCA---ATTCAATTCCAGGCAAAAAGTAAA------ATTAAAAAATAATAATACCGCAAATTACATTAGCTACAA----T--AAA---------A------------------------------GTATA----TATCAACA-----------TT-----TTG-TA--------------------------GTAAAT---------------A-------GGAATAAAAAATAACAC---AATGTAA------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................TTTTAGGAGAAATAA--------AGCTAC...................................................................................................................................................................................................................................................................................................................................................................................2112.00202000
.......TAATTAATAATGATCAA----ACTC---------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
....................................................................................................................ACAAGATCTAACATACAATAC.........................................................................................................................................................................................................................................................................................................................................................2111.00101000
....................................................AATATCTACAAACTATACATA.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
............................................................................................................................TAACATACAATACAATAAAGA-................................................................................................................................................................................................................................................................................................................................................2111.00101000
............................................................................................................................................AAAGA-CTA--CAA-TGAAATACTT.............................................................................................................................................................................................................................................................................................................................2111.00101000
................ATGATCAA----ACTC---------------ACATAAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001
................................................................................................................................ATACAATACAATAAAGA-CTA--C..........................................................................................................................................................................................................................................................................................................................................2111.00101000
................................................................................................................................................................................TCGAGAATAT-TTTGTGGACAC............................................................................................................................................................................................................................................................................................2111.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................TTG-TA--------------------------GTAAAT---------------A-------GGAATAAAA........................2111.00100010
................................................CATAAATATCTACAAACTATA.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
...............................................................................................................................CATACAATACAATAAAGA-CTA--...........................................................................................................................................................................................................................................................................................................................................2111.00101000
.................TGATCAA----ACTC---------------ACATAAATAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
................ATGATCAA----ACTC---------------ACATAAATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
....................................................................................................................................................................................................................................................................................................................................................................TA----TATCAACA-----------TT-----TTG-TA--------------------------GTAA..........................................................2111.00101000
...............................................................................TATTTTTAGGAGAAATAA--------AGC......................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
...........TAATAATGATCAA----ACTC---------------ACAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
.............................................................................................................................................................................TTTTCGAGAATAT-TTTGTGGA...............................................................................................................................................................................................................................................................................................2111.00101000
..................................................................................TTTTAGGAGAAATAA--------AGCT.....................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
droVir3
T-AAAACTAAATAATGT---TCGA----ACAACTAG----ATGAAAAACATAA----------------------------------------------------TTTAATTACAATCT--------------AAGACATAAGGA-CTA--CAC-ATAAATACTT-----------TCGAGAGCAGGC-------GA--AAAACTTGT---------------------TG---AATCAATTCCATT-------CGC-------ATTACAAAATAATAATACCGAGAATTACATAAAC-TATA----T--ATA-------GGAA-T------A---ATGTTGACAA-------ACACA----CACAATCA-----------GA-----GCG-AAACACAGG----------CAAACTGAAGGCACCAAATAAAAATGATTT-----------AAA--TTC------------GAAT------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................TAAATACTT-----------TCGAGAGCAGGC-------...............................................................................................................................................................................................................................................................................................21117.0017002000200000000000000011110202010000001200000000000000000000010
..............................................................................................................................................................AATACTT-----------TCGAGAGCAGGC-------GA--...........................................................................................................................................................................................................................................................................................21113.0013002000000000000000201011000001010000001000000000000000000000120
...........................................................................................................................................................................................................................................................................................................................................................................................................CACAGG----------CAAACTGAAGGCACC........................................................21110.0010101001000000000000001020000010011000000000000000000000000000010
...............................................................................................................................................................ATACTT-----------TCGAGAGCAGGC-------GA--A..........................................................................................................................................................................................................................................................................................21110.0010000001000100000000100000112001000000000000000000000000000000020
.......................................................................................................................................................CAC-ATAAATACTT-----------TCGAGAGC..........................................................................................................................................................................................................................................................................................................2118.008001000000000000000000001002100020000000100000000000000000000000
...............................................................................................................................................................ATACTT-----------TCGAGAGCAGGC-------GA--...........................................................................................................................................................................................................................................................................................2016.006002000100000000000000001010000100000000000000000000000000000000
.................................................................................................................................................................................CGAGAGCAGGC-------GA--AAAACTTG...................................................................................................................................................................................................................................................................................2116.006000001100020000000000000000000000000000000000000000000000000020
...........................................................................................................................................................................................................................................................................................................................................................................................................CACAGG----------CAAACTGAAGGCAC.........................................................2016.006002011000000000010000000000000000000000100000000000000000000000
......................................................................................................................T--------------AAGACATAAGGA-CTA--CAC-AT.....................................................................................................................................................................................................................................................................................................................................2115.005001000000000001000000010010100000000000000000000000000000000000
...........................................................................................................................................................ATAAATACTT-----------TCGAGAGCAGG.......................................................................................................................................................................................................................................................................................................2115.005002000000100000000000000000000000000100100000000000000000000000
................................................................................................................ACAATCT--------------AAGACATAAGGA-CT..............................................................................................................................................................................................................................................................................................................................................2114.004020000000000000000100000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................AATCA-----------GA-----GCG-AAACACAGG----------CA.....................................................................2114.004000011000000000000000000000000000000000100000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................AA-------ACACA----CACAATCA-----------GA-----GCG-A.........................................................................................2114.004000000100000000000000001000000000000001000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................ACAGG----------CAAACTGAAGGCACCA.......................................................2114.004012000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................................CAA-------ACACA----CACAATCA-----------GA-----GCG-..........................................................................................2113.003000000000000000000000001001000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................A----CACAATCA-----------GA-----GCG-AAACACA...................................................................................2113.003000000100000000000000000001000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................CACAGG----------CAAACTGAAGGCACT........................................................2113.003000000000000000100000000000000000000002000000000000000000000000
................................................................................................................................................................TACTT-----------TCGAGAGCAGGC-------GA--...........................................................................................................................................................................................................................................................................................1913.003000001000000000000001000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................ACACAGG----------CAAACTGAAGGCAC.........................................................2113.003002000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TCA-----------GA-----GCG-AAACACAGG----------CAA....................................................................2013.003000000000000000000000000000100010000000000000000000000000000010
.............................................................................................................................................................AAATACTT-----------TCGAGAGCAGGC-------G..............................................................................................................................................................................................................................................................................................2113.003000000000000000000000000001000000001000000000000000000000000010
...................................................................................................................................................................TT-----------TCGAGAGCAGGC-------GA--AAAAC......................................................................................................................................................................................................................................................................................2113.003000000200000000000000000000000000000001000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................ACACA----CACAATCA-----------GA-----GCG-AAA.......................................................................................2113.003001000000000000000000001000000000000000000000000000000000000010
................................................................................................................................................................TACTT-----------TCGAGAGCAGGC-------GA--A..........................................................................................................................................................................................................................................................................................2013.003001001000000000000000000000001000000000000000000000000000000000
...........TAATGT---TCGA----ACAACTAG----ATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000001000000000001000000000000000000000000000000000
.................................................................................................................................................................ACTT-----------TCGAGAGCAGGC-------GA--AAA........................................................................................................................................................................................................................................................................................2112.002000000000000000000000000200000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................A-------ACACA----CACAATCA-----------GA-----GCG-AA........................................................................................2112.002000000000000000000000000001000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................ATCA-----------GA-----GCG-AAACACAGG----------CAA....................................................................2112.002000010000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................AAGACATAAGGA-CTA--CAC-AT.....................................................................................................................................................................................................................................................................................................................................2012.002000000000000000000000010000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TA----T--ATA-------GGAA-T------A---ATGTTGACA.........................................................................................................................................2112.002000000000000000000000000000000000000000200000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CA-----------GA-----GCG-AAACACAGG----------CAA....................................................................1912.002000000000000000000000000000000000000000200000000000000000000000
..............TGT---TCGA----ACAACTAG----ATGAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000011000000000000000000000000000000000000
..........................................................................................................................................................................................................................................AATCAATTCCATT-------CGC-------ATTAC.....................................................................................................................................................................................................................2112.002000000000000000000000001001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................ACAA-------ACACA----CACAATCA-----------GA-----GC............................................................................................2112.002000000000000000000000000001010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TCA-----------GA-----GCG-AAACACAGG----------CAAA...................................................................2112.002000000000000000001000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................T--ATA-------GGAA-T------A---ATGTTGACAA-------A................................................................................................................................2112.002000000000000000000000000000100000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................TGACAA-------ACACA----CACAATCA-----------GA-----..............................................................................................2112.002001000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................TGT---------------------TG---AATCAATTCCATT-------CGC-------..........................................................................................................................................................................................................................2112.002000000000000000001000000010000000000000000000000000000000000000
..........................................................................................................................................ATAAGGA-CTA--CAC-ATAAATAC...............................................................................................................................................................................................................................................................................................................................2112.002001000000000000000000000001000000000000000000000000000000000000
.......TAAATAATGT---TCGA----ACAACTAA----..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002001000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................TACTT-----------TCGAGAGCAGGC-------GA--AA.........................................................................................................................................................................................................................................................................................2112.002001000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................A-----------GA-----GCG-AAACACAGG----------CAAACT.................................................................2112.002000000000010000000000000000000000000000000000000000000000000010
....................................................................................................................................................A--CAC-ATAAATACTT-----------TCGAGAG...........................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000000100000000000000000000000000000100
..................................................................................................................................................................CTT-----------TCGAGAGCAGGC-------GA--AAAA.......................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................AAATACTT-----------TCGAGAGCAGG.......................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000010000000000000000000000000000000
....................TCGA----ACAACTAG----ATGAAAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................................................................................................CATT-------CGC-------ATTACAAAATAATA............................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................TAAGGA-CTA--CAC-ATAAATACT..............................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................A-------ACACA----CACAATCA-----------GA-----GCG-..........................................................................................1911.001000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TTGACAA-------ACACA----CACAATCA-----------G....................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................................................................................................................................................................................................................................................T------A---ATGTTGACAA-------ACACA----CACA....................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................AAGGA-CTA--CAC-ATAAATACTT-----------..................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................ACCGAGAATTACATAAAC-TAT....................................................................................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
............AATGT---TCGA----ACAACTAG----ATGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ACACAGG----------CAAACTGAAGGCA..........................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CACA----CACAATCA-----------GA-----GCG-AAAC......................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................AA-------ACACA----CACAATCA-----------GA-----GCG-..........................................................................................2011.001000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................ATTACAATCT--------------AAGACATAAG...................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TA-------GGAA-T------A---ATGTTGACAA-------A................................................................................................................................1911.001000000000000000000000001000000000000000000000000000000000000000
T-AAAACTAAATAATGT---TCGA----......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................ATCA-----------GA-----GCG-AAACACAGG----------CAAA...................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................TAATTACAATCT--------------AAGACATAA....................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................GA-----GCG-AAACACAGG----------CAAACTG................................................................2111.001000000000010000000000000000000000000000000000000000000000000000
.................................................................................................................................................................ACTT-----------TCGAGAGCAGGC-------GA--AAAA.......................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................ACAA-------ACACA----CACAATCA-----------GA-----GCG-..........................................................................................2211.001000000000000000000000000000000000000000100000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CA-----------GA-----GCG-AAACACAGG----------CAAAC..................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TACCGAGAATTACATAAAC-TA.....................................................................................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CA-----------GA-----GCG-AAACACAGG----------CAAA...................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................ACAAAATAATAATACCGAGAAA.................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
........AAATAATGT---TCGA----ACAACTAG----..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGCACCAAATAAAAATGA............................................2111.001000000000000001000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................ACTTGT---------------------TG---AATCAATTCCATT-------....................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
...............................................................................................................................................................ATACTT-----------TCGAGAGCAGGC-------GA--AT.........................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................GTTGACAA-------ACACA----CACAATCA-----------GA-----..............................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TAATAATACCGAGAATTACAT............................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................AACTTGT---------------------TG---AATCAATTCCAT............................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GACAA-------ACACA----CACAATCA-----------GA-----G.............................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
................................................................................................................ACAATCT--------------AAGACATAAGGA-CTA--...........................................................................................................................................................................................................................................................................................................................................2211.001010000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CAGG----------CAAACTGAAGGCACCA.......................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AATCT--------------AAGACATAAGGA-CT..............................................................................................................................................................................................................................................................................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................CTA--CAC-ATAAATACTT-----------TCGAG.............................................................................................................................................................................................................................................................................................................2111.001000010000000000000000000000000000000000000000000000000000000000
..........................................................................................................TTAATTACAATCT--------------AAGACATA.....................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................CAGG----------CAAACTGAAGGCACC........................................................1911.001100000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TTACAATCT--------------AAGACATAAGGA-................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................AGACATAAGGA-CTA--CAC-ATA....................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................AAACTTGT---------------------TG---AATCAATTCCA.............................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CAGG----------CAAACTGAAGGCACCAA......................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................ATCA-----------GA-----GCG-AAACACAGG----------CA.....................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............ATGT---TCGA----ACAACTAG----ATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................AATCA-----------GA-----GCG-AAACACAGG----------CC.....................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
..........ATAATGT---TCGA----ACAACTAG----AT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................AATCT--------------AAGACATAAGGA-CTA--C..........................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................ATAAATACTT-----------TCGAGAGCAG........................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................CAA-------ACACA----CACAATCA-----------GA-----GC............................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
.............................................AAACATAA----------------------------------------------------TTTAATTACAATC............................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TTACAAAATAATAATACCGAG....................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
..............TGT---TCGA----ACAACTAG----ATGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................ACAGG----------CAAACTGAAGGCA..........................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................A----T--ATA-------GGAA-T------A---ATGTTGA...........................................................................................................................................1811.001000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................G---AATCAATTCCATT-------CGC-------ATTA......................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TACAATCT--------------AAGACATAAG...................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TATA----T--ATA-------GGAA-T------A---ATGTTGA...........................................................................................................................................2111.001000000100000000000000000000000000000000000000000000000000000000
...................................................................................................................................................TA--CAC-ATAAATACTT-----------TCGAGA............................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
........................................................................................................................................................AC-ATAAATACTT-----------TCGAGAGCA.........................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................C-TATA----T--ATA-------GGAA-T------A---ATGTTG............................................................................................................................................2111.001000000000000000000000000000000000100000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................AAC-TATA----T--ATA-------GGAA-T------A---ATGC..............................................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
.....................CGA----ACAACTAG----ATGAAAAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TTACATAAAC-TATA----T--ATA-------GGA...............................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................T---------------------TG---AATCAATTCCATT-------CGC-------A.........................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............ATGT---TCGA----ACAACTAG----ATGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................ACAA-------ACACA----CACAATCA-----------GA-----G.............................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................AAGACATAAGGA-CTA--CAC-ATA....................................................................................................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................ATA----T--ATA-------GGAA-T------A---ATGTTGAC..........................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................A----T--ATA-------GGAA-T------A---ATGTTGACAA-------.................................................................................................................................2111.001000000000000000000000001000000000000000000000000000000000000000
.........................................................................................................................................................................................................AACTTGT---------------------TG---AATCAATTCC..............................................................................................................................................................................................................................................1911.001000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................................CTT-----------TCGAGAGCAGGC-------GA--AAAAC......................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................T-----------TCGAGAGCAGGC-------GA--AAAACT.....................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................ACA----CACAATCA-----------GA-----GCG-AAACA.....................................................................................2111.001000000000000000000000001000000000000000000000000000000000000000
droMoj3
TTATAACTAAATAATGA---AGGA----ACCACTAGTA-GACAA--AACATAA----------------------------------------------------TTTAATTACAATCT--------------AAGACAT-GGGA-CTA--CAAATAAAATACTT-----------TCGAGAGCAG-C-------GA--AACACTTGTTACACTG-T-----TGATTAATTACGCTTCAATTCCATACAGTAATCGCA-------TTACAAAATAATAATACCGAGAATTACATAAACT-ATTTATAC--ATA---TATAGGAAATAATAATATATATAGT--------------------------AAT-----------AA-----TCA-GAGTG---A----------AGCACAAAACTTGTT-----------------------GAGGA----TAT-AAAA---AATATGA------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................AAAATACTT-----------TCGAGAGCAG-C-------G..............................................................................................................................................................................................................................................................................................2112.002200000
.............................................................................................................................................................AAATACTT-----------TCGAGAGCAG-C-------GA--...........................................................................................................................................................................................................................................................................................2112.002100001
................................................................................................................................................................................................................TACACTG-T-----TGATTAATTACGC.......................................................................................................................................................................................................................................................2112.002200000
...............................................................................................................TACAATCT--------------AAGACAT-GGGA-CT..............................................................................................................................................................................................................................................................................................................................................2112.002200000
......CTAAATAATGA---AGGA----ACCACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
........AAATAATGA---AGGA----ACCACTAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.....................................................................................................................................................................................................................................TTACGCTTCAATTCCATACAG........................................................................................................................................................................................................................................2111.001100000
.............................................................................................................................................................................................................................................CAATTCCATACAGTAATCGCA-------.........................................................................................................................................................................................................................2111.001100000
..................................................................................................................................................CTA--CAAATAAAATACTT-----------TCGA..............................................................................................................................................................................................................................................................................................................2111.001100000
.........................................................................................................................................................................................G-C-------GA--AACACTTGTTACACTG-T-----....................................................................................................................................................................................................................................................................2111.001100000
.........................................................................................................................................................AATAAAATACTT-----------TCGAGAGC..........................................................................................................................................................................................................................................................................................................2011.001100000
..............TGA---AGGA----ACCACTAGTA-GACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..........ATAATGA---AGGA----ACCACTAGTA-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...................................................................................................................................................................................AGAGCAG-C-------GA--AACACTTGTTACA..............................................................................................................................................................................................................................................................................2311.001100000
.......TAAATAATGA---AGGA----ACCACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100
...........................................................................................................................................................TAAAATACTT-----------TCGAGAGCAG-C-------...............................................................................................................................................................................................................................................................................................2111.001000001
.....ACTAAATAATGA---AGGA----ACCAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..............................................................................................................................................................................................................................................................................................................................................ATATAGT--------------------------AAT-----------AA-----TCA-GAGTG---A----------.......................................................................2111.001000001
.............ATGA---AGGA----ACCACTAGTA-GAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.................................................................................................................................................................................................................ACACTG-T-----TGATTAATTACGCT......................................................................................................................................................................................................................................................2111.001100000
..............................................................................................................TTACAATCT--------------AAGACAT-GGGA-C...............................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................................................................................................................................................................................................................................................................................................................................TATATAGT--------------------------AAT-----------AA-----TCA-GAGTG---..................................................................................2111.001000001
.......TAAATAATGA---AGGA----ACCACTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.......................A----ACCACTAGTA-GACAA--AACAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
....................................................A----------------------------------------------------TTTAATTACAATCT--------------AAGACA.......................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
T-AGAACTAAATAATGA---TGGA----GTAACTAGAT-GGGAAA---TACAA--------------------------------------------TTAATTATGATAATTTAAATCT--------------AAGACATAAAAT-CTA--CA--AAAAATACTT-----------TCGAGA-------------GA--CA--GTTTT---------------------CG---ATTCAATTCCATACAA-TTAAACG-----CATTACAAAATAATAATACCGAGAATTACATAAACTAAT-----T--ACACTACATAGGA----------------------------------------ATATACA-----------GA-----TA-------CAGA------------------------C----------GAATT-----------CAA--TTCAAACAG---AAC-CAC------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................A---TGGA----GTAACTAGAT-GGGAAA---..................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00303
.............ATGA---TGGA----GTAACTAGAT-GGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00312
......CTAAATAATGA---TGGA----GTAACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00202
...........................................................................................................................................................................................................................................................................ACAAAATAATAATACCGAGAA..................................................................................................................................................................................................2111.00110
.......TAAATAATGA---TGGA----GTAACTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
....................................................................................................................TCT--------------AAGACATAAAAT-CTA--CA--.......................................................................................................................................................................................................................................................................................................................................2011.00110
..........................................................................................................................................................................................................................................................................................................TAAT-----T--ACACTACATAGGA----------------------------------------ATA....................................................................................................................2111.00110
.............................................................................................................................................................................................................................................CAATTCCATACAA-TTAAACG-----C..........................................................................................................................................................................................................................2111.00110
....................TGGA----GTAACTAGAT-GGGAAA---T.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101
............................................................................................................................................................................................................................................................................................................................CATAGGA----------------------------------------ATATACA-----------GA-----TA-------CAG..................................................................................2111.00101
............AATGA---TGGA----GTAACTAGAT-GG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101
....................................................................................................................................................A--CA--AAAAATACTT-----------TCGAGA-------------GA--...........................................................................................................................................................................................................................................................................................2111.00101
...........................................................................................................................................................AAAAATACTT-----------TCGAGA-------------GA--CA--G......................................................................................................................................................................................................................................................................................2111.00101
........................................................................................................................................................................................................................................................................................................ACTAAT-----T--ACACTACATAGGA----------------------------------------A......................................................................................................................2111.00110

Generated: 05/17/2015 at 07:38 PM