ID:

dsi_11960

 Coordinate:

2l:8114597-8114864 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-40.0 -40.0 -40.0

Flybase annnotation

exon [2l_8114865_8115037_+]; CDS [2l_8114865_8115037_+]; exon [2l_8113705_8114596_+]; CDS [2l_8113705_8114596_+]; intron [2l_8114597_8114864_+]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GGAGAACACGTGGAGGGCAGCATTACCCTAAATCTGCCGCAGGGCGATACGTAAGTCTTTAAACTTTCCATTGCTAATCGGTTTTAGCTGTAAGACAGAGGGATTTAATATCTCTCATGCTGATATACATAATATACATGCTCTCGCTATTTTGAAAAGCGCTATTCGAAATATTGACAGTTCAGATAATCGTTTTTAACTTTACTATCTAAATAAAATTTAAATTGCATGATAATAACGCTGGCAAAAGTAATGCAAGGTGATATAACAAAGACTGCAATACTAATATTTTAATTGTCTTCCTTTTTACATATTTAGACTTTCCCAGTTGGTGCGGATTTCAATGGCGGTGGCCATCTTCCTCTCGT
**************************************************...(((((((..(((((.(((((((..(((((.(((..((((((.(((((((((.....))))))).))))....)))).......(((((..(((.(((((((((........))))))))).))).(((..((.(((......))).))..)))....................)))))....))).)))))....))))))).)))))........)))))))(((((..(((....))))))))....................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR618934
dsim w501 ovaries
 M024
male body		 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
 M023
head
 SRR553487
NRT_0-2 hours eggs
.........................................................................................................................................................................................................................................................................TAACAAAGACTGCAATACT.................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................ATTTCAATGGCGGTGGCCATCTTCC...... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................................................ATAACAAAGACTGCAATACT.................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................TACACTTTCCCAGTTGGTGCGGAT............................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................TCCCAGTTGGTGCGGATTTCAATGGC.................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0
................................TCTGCCGCAGGGCGAT................................................................................................................................................................................................................................................................................................................................ 16 0 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................................................................TGAGGCATTTAATCTCTCTCA........................................................................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 1 0 0
..........TGGAGGGACGCATTACGCTA.................................................................................................................................................................................................................................................................................................................................................. 20 3 2 0.50 1 0 0 0 0 0 1 0 0 0
...............................................................................GGTTTTAGCTGTATG.................................................................................................................................................................................................................................................................................. 15 1 10 0.40 4 0 4 0 0 0 0 0 0 0
...............................................................................................................................................................................................GTTTTTAACTGTTCTATCTCAA........................................................................................................................................................... 22 3 3 0.33 1 0 0 0 0 0 0 0 1 0
............................................................................................................................................................................................................................................................................................................................AGACTTGCGCAGTTGGT................................... 17 2 7 0.14 1 0 0 0 0 0 1 0 0 0
.........................................................................................GTAAGACAGATGGAT........................................................................................................................................................................................................................................................................ 15 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GTTGGTGCGGATATCC......................... 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................TATTAATTTTACTATCTAA............................................................................................................................................................ 19 2 20 0.05 1 0 0 0 0 0 1 0 0 0
......................................................................................GCTGTAATACGGAGGG.......................................................................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 1 0 0 0
................................................................TGACCATTACTAATCGGT.............................................................................................................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1
.............................................................................TCGATTTTAGCTGTATG.................................................................................................................................................................................................................................................................................. 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

CCTCTTGTGCACCTCCCGTCGTAATGGGATTTAGACGGCGTCCCGCTATGCATTCAGAAATTTGAAAGGTAACGATTAGCCAAAATCGACATTCTGTCTCCCTAAATTATAGAGAGTACGACTATATGTATTATATGTACGAGAGCGATAAAACTTTTCGCGATAAGCTTTATAACTGTCAAGTCTATTAGCAAAAATTGAAATGATAGATTTATTTTAAATTTAACGTACTATTATTGCGACCGTTTTCATTACGTTCCACTATATTGTTTCTGACGTTATGATTATAAAATTAACAGAAGGAAAAATGTATAAATCTGAAAGGGTCAACCACGCCTAAAGTTACCGCCACCGGTAGAAGGAGAGCA
**************************************************...(((((((..(((((.(((((((..(((((.(((..((((((.(((((((((.....))))))).))))....)))).......(((((..(((.(((((((((........))))))))).))).(((..((.(((......))).))..)))....................)))))....))).)))))....))))))).)))))........)))))))(((((..(((....))))))))....................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
.........................................................................................................................................................................................................................................................................................................AGAAGGAAAAATGTAT....................................................... 16 0 1 1.00 1 1 0 0
..................................................................................................................................................................................................AAATAGAAATGCTAGATTGAT......................................................................................................................................................... 21 3 8 0.13 1 1 0 0
...................................................................................................................................................................................GAAGTCTAGTAGCTAAAATT......................................................................................................................................................................... 20 3 12 0.08 1 0 0 1
.........................................................................................................ATTATGGAGAGTAAGAC...................................................................................................................................................................................................................................................... 17 2 13 0.08 1 1 0 0
.............................................................................................................................................AGAGCGATATAACGTTCCG................................................................................................................................................................................................................ 19 3 14 0.07 1 0 1 0
..................................................................................................................................TTATATGTATGAGAGGAATA.......................................................................................................................................................................................................................... 20 3 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:8114547-8114914 + dsi_11960 GGAGAACACGTGGAGGGCAGCATTACCCTAAATCTGCCGCAGGGCGATACGTAAGTCTT---TAAACTT--TCCATTGCTAATCGGTTTTAGCT-GTAA--GACAGAGGGATTTAAT----------------AT-----CT----------------------------CTCA-----------TGCTGA----------------------------------------------------------------------TATAC------ATAATATACATGCTCTCGCTATTTTGAAAAGCGCTATTCGAAATATTGACAGTTCAGATA------ATCGTTTTTAACTTTACTATCTAAATAAAATTTAAATTGCATG------------ATAATAA-CGCT-GGCAA--------------------AAGTAATGCAAGGTGATATA--------------------------------------ACAA-----------------AGACTGCA-----------------------ATACTAATATTTTAATTG---TCTTCCTT-TTTACATATTTAGACTTTCCCAGTTGGTGCGGATTTCAATGGCGGTGGCCATCTTCCTCTCGT
droSec2 scaffold_3:3883992-3884359 + GGAGAACATGTGGAGGGCAGCATTACCCTAAATCTGCCGCAGGGCGATACGTAAGTCCT---TAAACAT--TCCATTGCTAATCGCTTTTAGTT-GTAA--GGCAGAGGGATTTAAT----------------AT-----TT----------------------------CTCA-----------TGCTGA----------------------------------------------------------------------TATAC------ATAATCTACATGCTCTCGCTGTTTTGAAAAGCGCTATTCGAAATATTGACAGTTCAGATA------ATCGTTATAAACTTTACTATCTAAATAAAATTTAAATGACATG------------ATAATAA-CGCT-GGCAA--------------------AAGTAATGCAAGGTGATATA--------------------------------------ACAA-----------------AGACTGCA-----------------------ATACTAATATTTTAATTG---TCTTCCTT-TTTACATATCCAGACTTTCCCAGTTGGTGCGGATTTCAATGGCGGTGGCCATCTTCCTCTCGT
dm3 chr2L:8387329-8387708 + GGCGAACACGTGGAGGGCAGCATTACCCTAAATCTGCCGCAGGGCGACACGTAAGTCCT---TAAACTT--TCCATTGCTAATCGGTTTTAGTT-GTAA--GACAGAGGGATTTAAT----------------AT-----TT----------------------------CTCA-----------TGCTGA----------------------------------------------------------------------TATAC------ATAATCTACATGCTCTTGCTATT-TGAAAAGCGCTATTCGAAATATTGATAGTTCAGATAGTTAAGATCGTTATTAACTTTACTGTCTAAATAA-TTTTAAATTACATG------------ATAATAA-AGCT-AGCAA--------------------A---------AGGTGTTATA--------------------------------------ACAATTTTTAATGATATTCCCAGACTGCA-----------------------ATACTAATATTTTAATTG---TCTTCCTC-TTTACATATTTAGACTTTCCCAGTTGGTGCGGATTTCAATGGCGGTGGCCATCTTCCTCTCGT
droEre2 scaffold_4929:17296976-17297084 + GGTGACCACGTGGAGGGCAGCATTACCCTAAATCTGCCACAGGGCGACACGTAAGTCAT---TAAACTT--TCCATTGCCAAAAGGTTGTAGTT-GTAT--GAAAGAGGGATTTAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 2L:11025540-11025908 + dya_290 GGCGAACACGTGGAGGGCAGCATTACCCTAAATCTTCCACAGGGCGATACGTAAGTCAT---TAAACTT--TCCATTGCTAATCGGTTTTAGTT-GTAT--GAAAGAGGGATTTAAT----------------AT-----TC----------------------------CTCA-----------CATTGA----------------------------------------------------------------------TCTA----------AT----CTTTTCTGGCTATTTGGAATAGCGTTGTTTCAAATATTGACAGATCCGATA------AT----------------------------------------------------------AT-AGCTTAGCTAAAACATA--TG----------------------------------------AACTTAATTAATGACATGTAAAATAAGACAATTGT--ATGTTATTTGCAGACTGCATTCATTAGAATTTTTGACTCGTAAGACTAAC-TTCTAATTG---CCCTCTTTTTTCACCGATTTAGACTGTCCCAGTTGGTGCGGATTTCAATGGCGGTGGCCATCTTCCTCTCGT
droEug1 scf7180000409461:412332-412572 + GGCGAACATGTGGAGGGTAGTATAACCCTAAATCTGCCGCAGGGAGATACGTGAGTCCT---TACATT----AGTTTCATAATAGATTTTAG-----------------------------------------AC-----CC----------------------------CTCATAACTTATATT------TATGGCCTTTAATTTTGAAACCTTAGTCGAAACATTTAC--------------------------------------------------------------------------------------------C----AAATC------ATTTATTTATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATATTATATA-----GA--TATT-TTTATCTTTTTAGCCTATCTCAATTGGTGCGAATCTCCATGGCGGTGGCCATCTTCCTCTCTT
droBia1 scf7180000301500:257489-257762 - GGCGAACATGTCGAGGGCAGCATAACCCTTAATCTGCCGCAGGGCGATACGTAAGTTCA---TAAAAACTTTCCATTCTCAAACGATCTTAGCTTGTGG--GACAAAG-GATTTCTT----------------AT-----CT----------------------------C--------------------AATGGATATTATTGTTCTG--------------------ATGATGATAAATGTTCTTAATAAGTAGACTTTATAT------ATAA------------------------------------------------------------------------------------------------------------------------------------CCA--------------------AA---------------------------------------------------------------------------------------------------------GTAATATTAGC-TTTAAATCGATACCCTCTTC-TCCACCTTTTTAGACTCTCTCAGTTGGTACGGATCTCCATGGCGGTGGCCATCTTCCTCTCTT
droTak1 scf7180000415629:97591-97703 + GGCGAGCATGTGGAGGGCAGCATAACCCTAAATCTGCCACAGGGCGATACGTGAGTTCT---AAAACTT-TTCCATTCCTAATCGATTCTAGTTCCTGA--GAAAGAG-GATTAAAT----------------AT-----C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491338:492654-492743 - GGCGAACATGTGGAGGGCAGCATAACCCTAAATCTGCCGCAGGGCGAAACGTAAGTCCT---AAGAATT--TCCATTACTAATC---TTTAGCT-TTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000767514:964-1061 - GGATCCGCGGTTTTGGGTTCCATTACTCTTAATATGCCGGAGCATGAAGTGTAAGTTTACCTTAAAGTA---ATCTTCCTAGTATTCTTTAGTT-ATAA--AAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000448460:544-844 - GGCGATCATGTGGAGGGCAGCATTACCCTAAATCTGCCGCAGGGCGACACGTAAGTCTA---AAAACTT--TCCATTCTTAATCCT---CTAAT-TTGAGTG------G------AA----------------AC-----CT----------------------------TTTT-----------CGTTGG----------------------------------------------------------------------TTTATAATCTTAAAATCTATTTGCTCCTGCATTTCTATAAA--------------------------------------------------------------------------------------------------------------AACATATATGAATCATATAAAATGTTGCAAGCTAATTTAGGCAGCAGTACTACTTAATTTATGAAAAT--------------------------------------------------------------------TATTTTAACAC---AATATTTC-CTTATTTCTTTAGTCTTTCTCAGTTGGTGCGAATCTCCATGGCGGTGGCCATCTTCCTCTCGT
droKik1 scf7180000302412:520360-520448 + TATTACCGCATTAATTTTGTTATTATATTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCCAGTCTTTCCCAGTTGGTGCGCATCACCATGGCCGTGGCCATCTTCCTCTCCT
droAna3 scaffold_12916:5471448-5471512 + GGGGATGCAGTCAAGGGCAGCATTACCCTCAATCTGCCTCAAGGCGATACGTAAGTTTT---TTAATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396568:1364494-1364560 - GGCGATGCAGTTAAGGGCAGCATTACCTTGAATTTGCCTCAAGGCGATACGTAAGCTTT---TAAAATT--T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 4_group1:4123314-4123391 - GGCGAAGACGTCAAGGGCAGCATTACACTTAATCTGCCGCAAGGCGATGCGTGAGTTGA---AAAACTT--TCCATTCACAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_5:1141302-1141379 + GGCGAAGACGTCAAGGGCAGCATTACACTTAATCTGCCGCAAGGCGATGCGTGAGTTGA---AAAACTT--TCCATTCACAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004729:2541920-2542194 + GGTGATGCTACAGAGGCTAGCATTACATTGAATTTGCCTTTGGAAGACAAGTGAGTTGA---TATTTG-----------------------AAT-ATAAACA------A------ATGCCTATTACGCTCTTGCTTTTGTATAGCATACTTAAGGAAACATTTGAACACTTTGTTAATTAATAG-----------TTGCCTAACTATGGAGTTTTCTGTATAAAATCCAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAATCGT-----------------------ATATTAATGTTACGAA-----ATTCCTTC-TGTTTATTCACAGACTGGCCCAATCCGTGAAACTGATGATAGCCATAGCGATCTTTTTCACCT
droVir3 scaffold_12723:2314652-2314723 - CTTCTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-CGCCCGTTCACAGTCTATCGCAGCTGGTACGGATTTCCATGGCCGTGGCTATATTCCTGTCCT
droMoj3 scaffold_6680:21122366-21122447 + TATTTATTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---GATTCATA-TTCTCTCTTGCAGATTGGCTCAGTCCGTCAAGCTGATGATTGCCATTGCCATATTCTTCACCT
droGri2 scaffold_14945:80294-80552 + GGCGAGGGTGTTCAAGCGAGCATTACGCTAAATCTCCCCCACGACGATGTGTGAGTATT---ATATTTT----------------------------------------------------------------------------ATACTAATGAAATCGTTTTAAAACT---------AGAAG-----------TTCCACAAATTTG------------------------------------------------------------------------------------------------------------------------------------------------TATTTTGTAAATATAAATTAATTGG-ATGTAGAATTACTTATTAATTGTTTAT-AGAAA--------------------ACATATTGCAAG----------------------------------------------------------------------------------------------------CCATTTATTACAACTG---AATATCT-------TTTCACAGTCTATCGCAGATAGTCCGAATTTCCATGGCCGTGGCCATATTTCTGTCGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GGAGAACACGTGGAGGGCAGCATTACCCTAAATCTGCCGCAGGGCGATACGTAAGTCTT---TAAACTT--TCCATTGCTAATCGGTTTTAGCT-GTAA--GACAGAGGGATTTAAT----------------AT-----CT----------------------------CTCA-----------TGCTGA----------------------------------------------------------------------TATAC------ATAATATACATGCTCTCGCTATTTTGAAAAGCGCTATTCGAAATATTGACAGTTCAGATA------ATCGTTTTTAACTTTACTATCTAAATAAAATTTAAATTGCATG------------ATAATAA-CGCT-GGCAA--------------------AAGTAATGCAAGGTGATATA--------------------------------------ACAA-----------------AGACTGCA-----------------------ATACTAATATTTTAATTG---TCTTCCTT-TTTACATATTTAGACTTTCCCAGTTGGTGCGGATTTCAATGGCGGTGGCCATCTTCCTCTCGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--------------------------------------ACAA-----------------AGACTGCA-----------------------ATACT........................................................................................1911.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAATGGCGGTGGCCATCTTCC......2511.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA--------------------------------------ACAA-----------------AGACTGCA-----------------------ATACT........................................................................................2011.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCAGTTGGTGCGGATTTCAATGGC....................2611.00100000010000000000
................................TCTGCCGCAGGGCGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000000001000000
droSec2
GGAGAACATGTGGAGGGCAGCATTACCCTAAATCTGCCGCAGGGCGATACGTAAGTCCT---TAAACAT--TCCATTGCTAATCGCTTTTAGTT-GTAA--GGCAGAGGGATTTAAT----------------AT-----TT----------------------------CTCA-----------TGCTGA----------------------------------------------------------------------TATAC------ATAATCTACATGCTCTCGCTGTTTTGAAAAGCGCTATTCGAAATATTGACAGTTCAGATA------ATCGTTATAAACTTTACTATCTAAATAAAATTTAAATGACATG------------ATAATAA-CGCT-GGCAA--------------------AAGTAATGCAAGGTGATATA--------------------------------------ACAA-----------------AGACTGCA-----------------------ATACTAATATTTTAATTG---TCTTCCTT-TTTACATATCCAGACTTTCCCAGTTGGTGCGGATTTCAATGGCGGTGGCCATCTTCCTCTCGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................GCATTACCCTAAATCTGCCGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
dm3
GGCGAACACGTGGAGGGCAGCATTACCCTAAATCTGCCGCAGGGCGACACGTAAGTCCT---TAAACTT--TCCATTGCTAATCGGTTTTAGTT-GTAA--GACAGAGGGATTTAAT----------------AT-----TT----------------------------CTCA-----------TGCTGA----------------------------------------------------------------------TATAC------ATAATCTACATGCTCTTGCTATT-TGAAAAGCGCTATTCGAAATATTGATAGTTCAGATAGTTAAGATCGTTATTAACTTTACTGTCTAAATAA-TTTTAAATTACATG------------ATAATAA-AGCT-AGCAA--------------------A---------AGGTGTTATA--------------------------------------ACAATTTTTAATGATATTCCCAGACTGCA-----------------------ATACTAATATTTTAATTG---TCTTCCTC-TTTACATATTTAGACTTTCCCAGTTGGTGCGGATTTCAATGGCGGTGGCCATCTTCCTCTCGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTTGGTGCGGATTTCAATGGC....................2418.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGATTTCAATGGCGGTGGCCATC..........2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCAGTTGGTGCGGATTTCAATGGC....................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010010000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......CACGTGGAGGGCAGCATTACCCTAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCAGTTGGTGCGGATTTCAATGGC....................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAGTTGGTGCGGATTTCAATGGC....................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCCAGTTGGTGCGGATTTCAAT.......................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCCAGTTGGTGCGGATTTCAATGGC....................2812.0020000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...GAACACGTGGAGGGCAGCATTACCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
......................TTACCCTAAATCTGCCGCAGGGCGACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCTC-TTTACATATTTA...................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................A---------AGGTGTTATA--------------------------------------ACAATTT..........................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTGCGGATTTCAATGG.....................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GCATTACCCTAAATCTGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................ACATGCTCTTGCTATT-TGAAAAGCGC........................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTCCCAGTTGGTGCGGATTTC..........................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ACACGTGGAGGGCAGCATTACCCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000
GGCGAACACGTGGAGGGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GCAA--------------------A---------AGGTGTTATA--------------------------------------ACAA.............................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTTGGTGCGGATTTCAATGG.....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAGTTGGTGCGGATTTC..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGCGGATTTCAATGGCG...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCAGTTGGTGCGGATTTCAAT.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACCCTAAATCTGCCGCAGGGCGACACACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................ATAATAA-AGCT-AGCAA--------------------A---------AGGT.............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGCGGATTTCAATGGCGGTGGC..............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAGTTGGTGCGGATTTCAATGGCGGT.................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTCCCAGTTGGTGCGGATTTCAAT.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CGACACGTAAGTCCT---TAAACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAATGGCGGTGGCCATCTTCCTCT...2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCCTC-TTTACATATTTAG..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TTACCCTAAATCTGCCGCAGGGCGACAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GCGAACACGTGGAGGGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAGTTGGTGCGGATTTCAATGG.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTGCGGATTTCAATGGCGGT.................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................................................................ATGCTCTTGCTATT-TGAAAAGCGCTATTC...................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................A---------AGGTGTTATA--------------------------------------ACAATTTTTAAT.....................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GCT-AGCAA--------------------A---------AGGTGTTAT........................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---TCTTCCTC-TTTACATATTTAG..................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TACCCTAAATCTGCCGCAGGGCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GCATTACCCTAAATCTGCCGCAGGGCGACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TACCCTAAATCTGCCGCAGGGCGACACAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAGTTGGTGCGGATTTCAATGGCGG..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGCGGATTTCAATGGCGGTGGC..............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGCGGATTTCAATGGT....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGATTTCAATGGCGGTGG...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TTACATG------------ATAATAA-AGCT-AG..................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TTCAGATAGTTAAGATCGTTATTAACT...........................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
....AACACGTGGAGGGCAGCATTACCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......CACGTGGAGGGCAGCATTACCCTAAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGCGGATTTCAATGGCGGTGGCC.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................................................................GCTAATCGGTTTTAGTT-GTAA--GA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTG---TCTTCCTC-TTTACATATTTAG..................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AACACGTGGAGGGCAGCATTACCCTAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
droEre2
GGTGACCACGTGGAGGGCAGCATTACCCTAAATCTGCCACAGGGCGACACGTAAGTCAT---TAAACTT--TCCATTGCCAAAAGGTTGTAGTT-GTAT--GAAAGAGGGATTTAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........GTGGAGGGCAGCATTACCCTAAATCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
...GACCACGTGGAGGGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
droYak3
GGCGAACACGTGGAGGGCAGCATTACCCTAAATCTTCCACAGGGCGATACGTAAGTCAT---TAAACTT--TCCATTGCTAATCGGTTTTAGTT-GTAT--GAAAGAGGGATTTAAT----------------AT-----TC----------------------------CTCA-----------CATTGA----------------------------------------------------------------------TCTA----------AT----CTTTTCTGGCTATTTGGAATAGCGTTGTTTCAAATATTGACAGATCCGATA------AT----------------------------------------------------------AT-AGCTTAGCTAAAACATA--TG----------------------------------------AACTTAATTAATGACATGTAAAATAAGACAATTGT--ATGTTATTTGCAGACTGCATTCATTAGAATTTTTGACTCGTAAGACTAAC-TTCTAATTG---CCCTCTTTTTTCACCGATTTAGACTGTCCCAGTTGGTGCGGATTTCAATGGCGGTGGCCATCTTCCTCTCGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGACATGTAAAATAAGACAATT...........................................................................................................................................2411.00100000010000
..................................TTCCACAGGGCGATACACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19140.07101000000000
droEug1
GGCGAACATGTGGAGGGTAGTATAACCCTAAATCTGCCGCAGGGAGATACGTGAGTCCT---TACATT----AGTTTCATAATAGATTTTAG-----------------------------------------AC-----CC----------------------------CTCATAACTTATATT------TATGGCCTTTAATTTTGAAACCTTAGTCGAAACATTTAC--------------------------------------------------------------------------------------------C----AAATC------ATTTATTTATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATATTATATA-----GA--TATT-TTTATCTTTTTAGCCTATCTCAATTGGTGCGAATCTCCATGGCGGTGGCCATCTTCCTCTCTTSizeHit CountTotal NormTotal
No Reads
droBia1
GGCGAACATGTCGAGGGCAGCATAACCCTTAATCTGCCGCAGGGCGATACGTAAGTTCA---TAAAAACTTTCCATTCTCAAACGATCTTAGCTTGTGG--GACAAAG-GATTTCTT----------------AT-----CT----------------------------C--------------------AATGGATATTATTGTTCTG--------------------ATGATGATAAATGTTCTTAATAAGTAGACTTTATAT------ATAA------------------------------------------------------------------------------------------------------------------------------------CCA--------------------AA---------------------------------------------------------------------------------------------------------GTAATATTAGC-TTTAAATCGATACCCTCTTC-TCCACCTTTTTAGACTCTCTCAGTTGGTACGGATCTCCATGGCGGTGGCCATCTTCCTCTCTTSizeHit CountTotal NormTotal
No Reads
droTak1
GGCGAGCATGTGGAGGGCAGCATAACCCTAAATCTGCCACAGGGCGATACGTGAGTTCT---AAAACTT-TTCCATTCCTAATCGATTCTAGTTCCTGA--GAAAGAG-GATTAAAT----------------AT-----C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GGCGAACATGTGGAGGGCAGCATAACCCTAAATCTGCCGCAGGGCGAAACGTAAGTCCT---AAGAATT--TCCATTACTAATC---TTTAGCT-TTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GGATCCGCGGTTTTGGGTTCCATTACTCTTAATATGCCGGAGCATGAAGTGTAAGTTTACCTTAAAGTA---ATCTTCCTAGTATTCTTTAGTT-ATAA--AAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GGCGATCATGTGGAGGGCAGCATTACCCTAAATCTGCCGCAGGGCGACACGTAAGTCTA---AAAACTT--TCCATTCTTAATCCT---CTAAT-TTGAGTG------G------AA----------------AC-----CT----------------------------TTTT-----------CGTTGG----------------------------------------------------------------------TTTATAATCTTAAAATCTATTTGCTCCTGCATTTCTATAAA--------------------------------------------------------------------------------------------------------------AACATATATGAATCATATAAAATGTTGCAAGCTAATTTAGGCAGCAGTACTACTTAATTTATGAAAAT--------------------------------------------------------------------TATTTTAACAC---AATATTTC-CTTATTTCTTTAGTCTTTCTCAGTTGGTGCGAATCTCCATGGCGGTGGCCATCTTCCTCTCGTSizeHit CountTotal NormTotal
No Reads
droKik1
TATTACCGCATTAATTTTGTTATTATATTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCCAGTCTTTCCCAGTTGGTGCGCATCACCATGGCCGTGGCCATCTTCCTCTCCTSizeHit CountTotal NormTotal
No Reads
droAna3
GGGGATGCAGTCAAGGGCAGCATTACCCTCAATCTGCCTCAAGGCGATACGTAAGTTTT---TTAATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
GGCGATGCAGTTAAGGGCAGCATTACCTTGAATTTGCCTCAAGGCGATACGTAAGCTTT---TAAAATT--T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
GGCGAAGACGTCAAGGGCAGCATTACACTTAATCTGCCGCAAGGCGATGCGTGAGTTGA---AAAACTT--TCCATTCACAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
GGCGAAGACGTCAAGGGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.....AGACGTCAAGGGCAGCATTACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
droPer2
GGCGAAGACGTCAAGGGCAGCATTACACTTAATCTGCCGCAAGGCGATGCGTGAGTTGA---AAAACTT--TCCATTCACAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................CACTTAATCTGCCGCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
droWil2
GGTGATGCTACAGAGGCTAGCATTACATTGAATTTGCCTTTGGAAGACAAGTGAGTTGA---TATTTG-----------------------AAT-ATAAACA------A------ATGCCTATTACGCTCTTGCTTTTGTATAGCATACTTAAGGAAACATTTGAACACTTTGTTAATTAATAG-----------TTGCCTAACTATGGAGTTTTCTGTATAAAATCCAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAATCGT-----------------------ATATTAATGTTACGAA-----ATTCCTTC-TGTTTATTCACAGACTGGCCCAATCCGTGAAACTGATGATAGCCATAGCGATCTTTTTCACCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCGATCTTTTTCACC.1812.00220000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGAAACTGATGATAGCC...................2012.00220000
..........................ATTGAATTTGCCTTTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
...............................ATTTGCCTTTGGAAGACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAACTGATGATAGCC...................1811.00110000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGATAGCCATAGCGATCT.........2111.00100001
..........................ATTGAATTTGCCTTTGGAAGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..........................ATTGAATTTGCCTTTGGAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGAAACTGATGATAGCC...................1911.00110000
......................TTACATTGAATTTGCCTTTGGAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACTGATGATAGCCATAGC..............2111.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTGAAACTGATGATAGCC...................2111.00100001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGTGAAACTGATGATAGCC...................2211.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGAAACTGATGATAGCCAC.................2111.00110000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGCCCAATCCGTGAAACTGATGAT.......................2711.00110000
.....................ATTACATTGAATTTGCCTTTGGAAGACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACTGATGATAGCCATAGCGAT...........2411.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATAGCCATAGCGATCTTTTTC....2411.00100001
droVir3
CTTCTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-CGCCCGTTCACAGTCTATCGCAGCTGGTACGGATTTCCATGGCCGTGGCTATATTCCTGTCCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCTGGTACGGATTTCCAT.......................2212.002000000000000010000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCATGGCCGTGGCTATATTCCTGTCC.2811.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCAGCTGGTACGGATTTCC.........................2211.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTACGGATTTCCATGGC....................1811.001000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCATGGCCGTGGCTATATTCCTGT...2611.001000010000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCATGGCCGTGGCTATATTCCTGTCC.2711.001000000000000000000000000000100000000000000000000000000000000000
droMoj3
TATTTATTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---GATTCATA-TTCTCTCTTGCAGATTGGCTCAGTCCGTCAAGCTGATGATTGCCATTGCCATATTCTTCACCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGTCAAGCTGATGATTGC....................2111.001100000
droGri2
GGCGAGGGTGTTCAAGCGAGCATTACGCTAAATCTCCCCCACGACGATGTGTGAGTATT---ATATTTT----------------------------------------------------------------------------ATACTAATGAAATCGTTTTAAAACT---------AGAAG-----------TTCCACAAATTTG------------------------------------------------------------------------------------------------------------------------------------------------TATTTTGTAAATATAAATTAATTGG-ATGTAGAATTACTTATTAATTGTTTAT-AGAAA--------------------ACATATTGCAAG----------------------------------------------------------------------------------------------------CCATTTATTACAACTG---AATATCT-------TTTCACAGTCTATCGCAGATAGTCCGAATTTCCATGGCCGTGGCCATATTTCTGTCGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 06:02 PM