ID:dsi_11959 |
Coordinate:3r:17234491-17234640 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
five_prime_UTR [3r_17234171_17234490_+]; exon [3r_17234171_17234490_+]; intron [3r_17234491_17235450_+]
No Repeatable elements found
| ##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CAGGCGATTATGAAGCCTTCGTGTCAGTTGTCCATCTGGTCTTAGCCACAGTGAGTGTGTTTGCTCCTATTTTGATTCCACTGGTCGGGGCCCGGTCGGTAAACAAATTGTCTATTAAACAATCAACTTTTCACCTAATAAATGATATCGTATAAATCAATTGAGTCGATGCCAATCAAGTGGGGCAACACAGATAAATCTCCATCACAATGGGAAGAGATCGCAGATCTTGGAAAACGAAATGCATAAA **************************************************..((...(((((((.((((.((((((.....((((...(((.((((.(((........((((...............................))))........))).)))).)))...)))))))))))))))))).)))......))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR902009 testis |
M023 head |
SRR553487 NRT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................ACCGGTCGGGCCTCGGTC......................................................................................................................................................... | 18 | 3 | 20 | 2.35 | 47 | 47 | 0 | 0 | 0 | 0 |
| .................TTCGTGTCAGTTGTCCATCTG.................................................................................................................................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| ....................................................................ATTGTGATTCCGGTGGTCGGGG................................................................................................................................................................ | 22 | 3 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 |
| ............AAGCCTTCGTCTCAG............................................................................................................................................................................................................................... | 15 | 1 | 5 | 0.20 | 1 | 0 | 0 | 0 | 1 | 0 |
| ......................................................................TGTGATTCCGGTGGTCGGGG................................................................................................................................................................ | 20 | 3 | 10 | 0.10 | 1 | 0 | 0 | 0 | 0 | 1 |
| ..............................................................................................................................................................AATTGTGTCGATGCC............................................................................. | 15 | 1 | 11 | 0.09 | 1 | 0 | 0 | 0 | 1 | 0 |
|
GTCCGCTAATACTTCGGAAGCACAGTCAACAGGTAGACCAGAATCGGTGTCACTCACACAAACGAGGATAAAACTAAGGTGACCAGCCCCGGGCCAGCCATTTGTTTAACAGATAATTTGTTAGTTGAAAAGTGGATTATTTACTATAGCATATTTAGTTAACTCAGCTACGGTTAGTTCACCCCGTTGTGTCTATTTAGAGGTAGTGTTACCCTTCTCTAGCGTCTAGAACCTTTTGCTTTACGTATTT
**************************************************..((...(((((((.((((.((((((.....((((...(((.((((.(((........((((...............................))))........))).)))).)))...)))))))))))))))))).)))......))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR902009 testis |
SRR618934 dsim w501 ovaries |
M025 embryo |
M024 male body |
|---|---|---|---|---|---|---|---|---|---|
| ............TTCGGAAGCACAGTCAACAGGT........................................................................................................................................................................................................................ | 22 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ........................................................................................................................................................................................................................CTGTTGCGCCTAGAACCT................ | 18 | 3 | 20 | 0.15 | 3 | 0 | 0 | 2 | 1 |
| ........ATACTGCGGAAGCAC................................................................................................................................................................................................................................... | 15 | 1 | 7 | 0.14 | 1 | 0 | 1 | 0 | 0 |
| .................................................................................................................................................................ACTCGGCTACGGTTA.......................................................................... | 15 | 1 | 16 | 0.06 | 1 | 0 | 1 | 0 | 0 |
| .....................................................................................................................................................................................................AAGAGGTAGTGTTATCC.................................... | 17 | 2 | 17 | 0.06 | 1 | 0 | 1 | 0 | 0 |
Generated: 04/23/2015 at 02:42 PM