ID:

dsi_11886

 Coordinate:

3r:21072932-21073107 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.5 -12.3 -12.3

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
(TATAA)nSimple_repeatSimple_repeat+

Sense Strand Reads

AAAACCTGCCGGCGCGGATCTACGACCACACCAGTGTCATGGATGAGGAGGTGGGTCTCCAATCATCAATTACCATATTACTAAACAAATTATAAAAATCCAAGTATAATAACAATCAAAAGATTTAAGACATTATATTATATTATATTATTATTATATTATTTCATTATATTAATAATTAATTTCTGTTATAATTATTTTAATTTATCTTACTTTATCTTTGCAGTACTCACCCGTCATAGGCATATCCTCGTATTAGATTGATTCCTCTGGAAT
**************************************************((((..................))))...........................................(((((((((((.((((((.((.((((.(((((((.((((.........)))).)))))))))))...)).))))))..))))))...)))))...............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 M024
male body		 M025
embryo
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
............................................................................................................................................................................................................................................................GTATTAGATTGATTCCTCTGGAAT 24 0 1 6.00 6 0 5 1 0 0 0 0 0
.......................GACCACACCAGTGTCATGGATGAGGAGT................................................................................................................................................................................................................................. 28 1 1 2.00 2 2 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................ATTAGATTGATTCCTCTGGA.. 20 0 1 2.00 2 2 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................GATTGATTCCTCTGGAAT 18 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................................TAGGCATATCCTCGTATTAGATTGATT.......... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................CCACACCAGTGTCATGGATGAGGA................................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
.................ATCTACGACCACACCAGTGTCATGG.......................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
.............GCGGATCTACGACCACACCAGTGTCAT............................................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................ACACCAGTGTCATGGATGAGGAGT................................................................................................................................................................................................................................. 24 1 1 1.00 1 0 0 0 1 0 0 0 0
.......................GACCACACCAGTGTCATGGATGAGGA................................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................GTATTAGATTGATTCCTCTGGA.. 22 0 1 1.00 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................CGTATTAGATTGATTCCTCTGGG.. 23 1 1 1.00 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................ATTAGATTGATTCCTCTGGAAT 22 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................GTATTAGGTTGATTCCTCTGGAAT 24 1 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................................GTATTAGATTGATTCCTCTG.... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
.AAACCTGCCGGCGCGGAT................................................................................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................CATAGGCATATCCTCGTATTAGATTGAT........... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
...ACCTGCCGGCGCGGATCTACGAC.......................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................................GTATTAGATTGATTCCTCTGGACT 24 1 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................................CGTCATAGGCATATCCTCG....................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................GTGTTAGATTGATTCCTCTGGAAT 24 1 1 1.00 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................AATTTATCTTACTTTATCTTTGCAG.................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0
............................CACCGGTCTCATGGATGATGA................................................................................................................................................................................................................................... 21 3 4 0.75 3 0 0 0 0 3 0 0 0
...............................................................................................................................................................................................................................CAGTACTGACTCGTCAT.................................... 17 2 5 0.20 1 0 0 0 0 0 1 0 0
............................................................................ATTACTAAACAAATTAGAGT.................................................................................................................................................................................... 20 3 20 0.15 3 0 0 3 0 0 0 0 0
...........................................................................................................................................................................................................................TGAGGAGTACTCACCCGTC...................................... 19 3 8 0.13 1 1 0 0 0 0 0 0 0
............................................GACGAGGTGGGTCTCCAAGG.................................................................................................................................................................................................................... 20 3 10 0.10 1 0 0 0 0 0 0 0 1
.......................................................................................................................................TATTGGATTATATTATTATTTTATT.................................................................................................................... 25 3 11 0.09 1 0 0 0 0 0 0 1 0
............CGCGAAGCTACGACCA........................................................................................................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 0 1 0

Anti-sense strand reads

TTTTGGACGGCCGCGCCTAGATGCTGGTGTGGTCACAGTACCTACTCCTCCACCCAGAGGTTAGTAGTTAATGGTATAATGATTTGTTTAATATTTTTAGGTTCATATTATTGTTAGTTTTCTAAATTCTGTAATATAATATAATATAATAATAATATAATAAAGTAATATAATTATTAATTAAAGACAATATTAATAAAATTAAATAGAATGAAATAGAAACGTCATGAGTGGGCAGTATCCGTATAGGAGCATAATCTAACTAAGGAGACCTTA
**************************************************((((..................))))...........................................(((((((((((.((((((.((.((((.(((((((.((((.........)))).)))))))))))...)).))))))..))))))...)))))...............************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M023
head
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
.....................................................CCAGTGGTTACTAGTTAA............................................................................................................................................................................................................. 18 2 4 0.50 2 0 2 0 0 0 0
....................................................CCCAGAAGTTAGTAGT................................................................................................................................................................................................................ 16 1 5 0.40 2 2 0 0 0 0 0
.........................................................................................................................................................................................................................GGATACGTAATGAGTGGGCA....................................... 20 3 7 0.14 1 0 0 1 0 0 0
..............GCTTAGATGCTGGTG....................................................................................................................................................................................................................................................... 15 1 8 0.13 1 0 0 0 0 1 0
.............................................................................................................................................................................................................ATGGAATGCATTAGAAACGT................................................... 20 3 9 0.11 1 0 0 0 1 0 0
....GGACGGCCGCTCCTAGGT.............................................................................................................................................................................................................................................................. 18 2 9 0.11 1 0 0 0 1 0 0
...................................................................................................................................................................................................................................................................AAACTAAGGAGACCT.. 15 1 11 0.09 1 0 0 1 0 0 0
...............................................................................................................................................................................................................................GTAATGAGTGGGCAG...................................... 15 1 11 0.09 1 1 0 0 0 0 0
........GGCGGCGCCTAGGTCCTGGT........................................................................................................................................................................................................................................................ 20 3 15 0.07 1 0 0 0 0 1 0
..............................................................................................................................................................................................................................CGCAATGAGTGGGCAG...................................... 16 2 16 0.06 1 0 0 0 0 0 1
..................................................GACCCCGAGCTTAGTAGTT............................................................................................................................................................................................................... 19 3 16 0.06 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................ACATAATGAGTGGGCA....................................... 16 2 20 0.05 1 0 0 0 0 0 1
.................................................................................................................................................................................................................................AATGAGTGGGCAGTAGGC................................. 18 3 20 0.05 1 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:21072882-21073157 - dsi_11886 AAAACCTGCCGGCGCGGATCTACGACCACACCAGTGTCATGGATGAGGAGGTGGGTCTCCAA---TCA-----------------TCAATTACCATATTACTAAACA---AATTATAAAAATCCAA------GT------------ATAATAACAAT---CAAAAG----ATTTAAGACA---TT-----------------------------------------------------------------------------------------------------------------------------------------------------------ATA-------------------------------------TTATATTATATTATTAT----------------------------------------TATAT--------------------------TATTTCATTATATTAATAATTAATTTC-T------------------GTTA-TAATTATTT----TAA---------------------------T-------TTA--------------T-CTTAC---------TT-TATCTTTGCAGTACTCACCCGTCATAGGCATATCCTCGTATTAGATT-GATTCCT---CTGGAAT---
droSec2 scaffold_13:355519-355759 - AAAACCTGCCGGCGCGGATCTACGACCACACCAGTGTCATGGATGAGGAGGTGGGTTTCCAA---CTA-----------------TTAATTACCATACAACTATACA---AACTATAAATATCAAA------GT------------ATAATGATTAT---CATTGG----GTTTAAGACA---CA-----------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTCCCTAAT----ATTAAT--------------------------------------------------------------------------------------------------------------------------------------T------------------GTTA-TAATTATTA----TAA---------------------------C-------TTT--------------T-CTTAC---------TT-TAT-CTTGCAGTACTCACCCGTCATAGGCATATCCTCGTATTAGATT-GATTCCT---CTGGAAT---
dm3 chr3R:21567685-21567925 - AAAATCTGCCGGCGCGGATCTACGACCACACCAGTGTCATGGATGAGGAGGTGGGTCTCCAA---TTA-----------------TTAATTACCAT--------------------AAAAATCCAA------GT------------ATAATGATAAG---CATTGG----GTTTAACACA-----------------------------------------------------------------------------------------C-------CC----------------------------------GCA------AA-----TGATTTAATTTCCCTTCCATAAT----ATTAAT--------------------------------------------------------------------------------------------------------------------------------------C------------------GGTA-TACTTATTA----TAA---------------------------T-------TTA--------------T-CTTAA---------TT-TAT-CTTGCAGTACTCACCCGTCATAGGCATATCCTCGTATTAGATT-GATTCCT---CTGGAAT---
droEre2 scaffold_4820:6480207-6480446 + AAAACCTGCCGGCGCGAATCTATGACCACACCAGTGTCATGGATGAGGAGGTGGGTTCCCAA---TCAAATTACT----TAGCCAT----------TGAGCACTGGA---AACTATAAA------------------------------------------------------------------------------------------------------------------------------------------------------C--------C----------------------------------ACA------AA-----GGATTAAATTTTTCTCCCTTAAT----ACTTAAAAATTACTGAGC----------------------------------------------------------------------------------------------------------------------TTC-T------------------ATTA-GAATTATTA----TAA---------------------------T-------TTT--------------TTGTTAC---------TT-TCT-TTTACAGTACTCACCCGTCATAGGCATATCCTCGTATTAGATT-GATTCCT---CTGGAAT---
droYak3 3R:24909953-24910194 + AAAACCTGCCGGCGCGGATCTACGACCACACCAGTGTCATGGATGAGGAGGTGGGTTTCCAA---TCCAATTACT----TAACTATTAAT---------------------------------CAA------GT------------ATAATTGCAAT---GAGAGG----TGTTAAGACA---GA------------------------------------------------------------------------------------C--------------------------------------------------------------------CTTTCTTCCTTTAT----ATTTATAA--------GCTCCAAGT---------------------------------------------------------------------------------------------------------------TACAG------------------TTTA-TAATTATTA----TAA---------------------------C-------TTC--------------T-GTTAC---------TT-TTT-CTTACAGTACTCACCCGTCATAGGCATATCCTCGTATTAGATT-GATTCCT---CCGGAAT---
droEug1 scf7180000409682:1060075-1060278 + AAAACCTGCCGGCCAGAATCTACGACCATACCAGTGTTATGGATGAGGAGGTGGGTTTTTAA---AAAGATAACT---------------------------------------------------ACTTGAAATTTTGTTTTTAATT------------------------------------------------------TGAAACAAAA----------------------------------------------------------------------------------------AGTA----------------AAGATATATTGATTTAATTT------------------TTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTATTTTTT------------------C-------------------TAC-TTTACAGTACTCACCCGTCATAGGCATATCCTCGTATTAGATT-GATTCCT---TTGGAAT---
droBia1 scf7180000302136:2418554-2418777 - AAAACCTACCGGCCCGGATCTACGACCATACCAGTGTCATGGATGAGGAGGTGGGTCAAACT----------------------------------------------------------------ACTGACTG-------TTAAATT------------------------------------------------------AGAAGCAAAAAATATACTAATTATATTTAATTTTTTAATAATATAAAGG----------------A------------AGTCCCTC------------AGTA----------------ATGATATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA----------------------TGTTAT-------TTA--------------A-CTTA-------------TAT-CTTTCAGTACTCCCCCGTCATAGGCATATCCTCGTATTAGACT-GATTCCC---TTGGAAT---
droTak1 scf7180000415367:883869-883990 + AGAACCTGCCGGCACGGATCTACGATCATACTAGTGTCATGGATGAGGAGGTGGGTTTCTAA---GCAGAATAATATTTTAATTAG----------TGATTAATACAAAA-------------------------------------------------------------------------------------------------------------------------------------------TAATACTACACACAAAAAAAA-----CA---AG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491261:1185577-1185932 + AAAACCTGCCGGCACGGATCTACGACCACACCAGTGTCATGGATGAGGAGGTGGGTTTTCAA---TCAGATTTCC--------------------------------------------------A------AT------------TTAACTATAATTTCTGAAGGAGAGTAAACGCCTTTTAAATTGGTTAA--------------------------------------------------------------------------A-------------GCCTCTA-----C------AAGTTTATGCCATTTTTTTT-----------------------TTTA-------------------------GT-------TTTGTTTTAAAC---------------------------------------TAGTATACATATCTTATACTATTTCTCTTAAAATCATGTTTTTATATAAAA---TCTAGTTTC-TTAAATTTATACAAATGCTTACAATGTTTTT-AAATACAATTTAACA------TCCATATATTATTATTTTTT------------------C-------------------TTA-TTTTCAGTACTCACCCGTCATAGGCATATCCTCGTACTAGATT-AATTCCA---TTGGAAT---
droRho1 scf7180000780007:451719-452095 - AAAACCTGCCGGCACGGATCTACGACCACACCAGTGTCATGGATGAGGAGGTGGGTTTCCAT---TCAGATTGC--------------------------------------------------GA------GT------------TTAATTATAAT---TGTAGGGCGGTGAAAGGACATTGGACCGATTAAAATTCGTTTT-AAAAA------------TA-------------------------GCA----------------A-------------ACCTTTA-----A------AAGTTTGTCGCTCATATTTC-----------------------TTCT-------------------------GCTTTAAGGTTTATTTTAATATGATTAATATTAAAAAAAACTTTCAAAGATATTCTTGATTTATATACAT--------------------------TGTTTCTCTATATTA---TTTAGTTGA-T------------------GATA-TGATTTTTA----TAGCTCATCTACTAAACTCAT----TTA--T-----------TTTTT-----------TTAA---------TGTAAT-TTTACAGTACTCACCCGTCATAGGCATATCCTCGTACTAGATT-GATTCCA---TTGGAAT---
droFic1 scf7180000454055:1476063-1476278 - AAAACCTGCCATCACGGATCTACGACCACACCAGTGTCATGGATGAGGAGGTGGGTTTCCAT---TCAGATAATT--------------------------------------------------------------------AAATTAAT----------------------------------------TGA-ATTATTTCGGAGGACAAACTTTATTCAT-------------------------TTA----------------ACTTTAAACA---AGCTGCTTAATTC-----------------------------------------------------------TTTCACTAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------TTTATTTTTGTTTC-------------------TAT-TTTACAGTACTCACCCGTCATAGGCATATCCTCGTATTAGATT-GG---------TGGAAT---
droKik1 scf7180000301923:384616-384795 - AGAATCTGCCGGCAAGGATCTACGATCACACCAGTGTCATGGATGAGGAGGTGGGTTTTCAATATAAA----------------------------------------------------------ATTC-------------------------------------------------------------------------------------------------------------------------------ATTACATTAAAAT-----TA---AT----------------------------------------------------------------------TTCCAATAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------TCTACTCTTATTCT-------------------CCA-TTTCTAGTACTCACCCGTCATTGGCATATCCTCGTATTAGTTT-GATTCCTTTTTTGGCATCAT
droAna3 scaffold_13340:11570885-11570942 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCAGTACTCACCCGTTATAGGCATATCCTCGTATTAGATTTGATTCCT---TTGGAAT---
droBip1 scf7180000396691:478480-478552 + TTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-CATTTC--------TT-GCA-CTTCCAGTACTCACCCGTAATAGGCATATCCTCGTATTAGATT-GATTCCT---TTGGAAT---
dp5 2:23532911-23533119 + AAAATTTGCCAGCGCGCATCTACGATCATACCAGTGTCATGGATGAGGAGGTACGTGCTATA--------------CTTTAATTTT-----GT-----TTTACTACGACATAC-A--------------------------------------------------------------------------------------------------------------------------------------TA----------------GAT-------CTC-------------AGAATATAGAATTGTTACTCCTATTTCAAAA-----TTATTCCTT-------------T----TTTAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGT-------------TTATTTTTATCTA-------------------TTC-CTTATAGTACTCACCCGTTATAGGCATATCCTCGTATTAGAAC-G-------------------
droPer2 scaffold_3:6304894-6305098 + AGAATTTGCCAGCGCGCATCTACGATCATACCAGTGTCATGGATGAGGAGGTACGTGCTATA--------------CTTTAATTTT-----GT-----TTTACTACAACA-------------------------------------------------------------------------------------------------------------------------------------------TA----------------GAT-------CTA-------------AAAATATAGAATTGTTACTCGTATTTCAAAA-----TTATTCCTT-------------T----TTTAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGT-------------TTATTTTTATGTA-------------------TTC-CTTATAGTACTCACCCGTTATAGGCATATCCTCGTATTAGAAC-G-------------------
droWil2 scf2_1100000004943:14479384-14479538 + AAAATCTGCCGGCTCGCATCTATGATCACACCAGTGCTATGGATGAGGAGGTAAGCTATTTA---T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGA----------------G------------AGCCT-----------------TT----------------ATGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT---------------------------------------TTTTGTA---TACTTT-------AT-CATTACTTCATTATCC-TTG-TGCGCAGTATTCTCCCGTAATTGGCATATCATCGTATTAA------------------------
droVir3 scaffold_12855:6994979-6995140 - AGAATCTAACTGCACGGATCTACGATCACACCAGCGTAATGGATGAGGAGGTAAGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------ACTCTACCCAA-------------------------ACA----------------AAC-------CCA-------------AACACAACATA----------------ATGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTC---------------------------------------TTCTTCT---TTCTTT-------A-------------------TTA-TCTCTAGTACTCACCCGTCATAGGCATATCGTCGTATTAGAG------CTT---TTGG------
droMoj3 scaffold_6540:25623425-25623608 + AGAATCTACCCGCACGTATTTACGATCACACCAGCGTTATGGACGAGGAGGTAATAA--------ATA----------------------------------------------------------AATCACAA--------------------------------------------------------CTAAAACTATTTC-AG-------------------------------------------CC----------------AAT-------GC----------------------------------G------AAAA-----TCGTTCGTTTACCCCTTCTCACT----CTTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGT-------------CTCTTTTT------------------------CTC-TTTATAGTACTCACCCGTTATAGGCATATCGTCGTATTAGA----------------GGTT---
droGri2 scaffold_15074:5812722-5812896 + AGAATCTACCCGCACGCATCTACGATCACACCAGCGTCATGGATGAGGAGGTAACTATCACA----------------------------------------------------------------ACTCCAAA--------------------------------------------------------CTAAACTTATCCC-AAAAA----------------------------------------CA----------------AAT-------ACA-------------AAAACAAAAAAC---------------------------------C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT---------------------------------------TTCTT------------------C-------------------TTA-TCCGTAGTACTCACCCGTCATAGGCATATCGTCGTATTAGAG----CTTCT---TGGGTTT---

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAAACCTGCCGGCGCGGATCTACGACCACACCAGTGTCATGGATGAGGAGGTGGGTCTCCAA---TCA-----------------TCAATTACCATATTACTAAACA---AATTATAAAAATCCAA------GT------------ATAATAACAAT---CAAAAG----ATTTAAGACA---TT-----------------------------------------------------------------------------------------------------------------------------------------------------------ATA-------------------------------------TTATATTATATTATTAT----------------------------------------TATAT--------------------------TATTTCATTATATTAATAATTAATTTC-T------------------GTTA-TAATTATTT----TAA---------------------------T-------TTA--------------T-CTTAC---------TT-TATCTTTGCAGTACTCACCCGTCATAGGCATATCCTCGTATTAGATT-GATTCCT---CTGGAAT---SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAGATT-GATTCCT---CTGGAAT---2416.00605100000000000000
.......................GACCACACCAGTGTCATGGATGAGGAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200020000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGATT-GATTCCT---CTGGA.....2012.00200020000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATT-GATTCCT---CTGGAAT---1811.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGCATATCCTCGTATTAGATT-GATT................2711.00100010000000000000
.........................CCACACCAGTGTCATGGATGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
.................ATCTACGACCACACCAGTGTCATGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
.............GCGGATCTACGACCACACCAGTGTCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
...........................ACACCAGTGTCATGGATGAGGAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000100000
.......................GACCACACCAGTGTCATGGATGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAGATT-GATTCCT---CTGGA.....2211.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTATTAGATT-GATTCCT---CTGGG.....2311.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGATT-GATTCCT---CTGGAAT---2211.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAGATT-GATTCCT---CTG.......2011.00100010000000000000
.AAACCTGCCGGCGCGGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAGGCATATCCTCGTATTAGATT-GAT.................2811.00100010000000000000
...ACCTGCCGGCGCGGATCTACGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCATAGGCATATCCTCG..............................1911.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------------------T-------TTA--------------T-CTTAC---------TT-TATCTTTGCAG.........................................................2511.00100010000000000000
droSec2
AAAACCTGCCGGCGCGGATCTACGACCACACCAGTGTCATGGATGAGGAGGTGGGTTTCCAA---CTA-----------------TTAATTACCATACAACTATACA---AACTATAAATATCAAA------GT------------ATAATGATTAT---CATTGG----GTTTAAGACA---CA-----------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTCCCTAAT----ATTAAT--------------------------------------------------------------------------------------------------------------------------------------T------------------GTTA-TAATTATTA----TAA---------------------------C-------TTT--------------T-CTTAC---------TT-TAT-CTTGCAGTACTCACCCGTCATAGGCATATCCTCGTATTAGATT-GATTCCT---CTGGAAT---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............GCGGATCTACGACCACACCAGTGTCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
.......................GACCACACCAGTGTCATGGATGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
...................CTACGACCACACCAGTGTCATGGATGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
dm3
AAAATCTGCCGGCGCGGATCTACGACCACACCAGTGTCATGGATGAGGAGGTGGGTCTCCAA---TTA-----------------TTAATTACCAT--------------------AAAAATCCAA------GT------------ATAATGATAAG---CATTGG----GTTTAACACA-----------------------------------------------------------------------------------------C-------CC----------------------------------GCA------AA-----TGATTTAATTTCCCTTCCATAAT----ATTAAT--------------------------------------------------------------------------------------------------------------------------------------C------------------GGTA-TACTTATTA----TAA---------------------------T-------TTA--------------T-CTTAA---------TT-TAT-CTTGCAGTACTCACCCGTCATAGGCATATCCTCGTATTAGATT-GATTCCT---CTGGAAT---SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......GCCGGCGCGGATCTACGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CGACCACACCAGTGTCATGGATGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
....................TACGACCACACCAGTGTCATGGATGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000
...........................ACACCAGTGTCATGGATGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CAGTGTCATGGATGAGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTCACCCGTCATAGGC.......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATATCCTCGTATTAG........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATATCCTCGTATTAGATT-GATTCC..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCGTATTAGATT-GATTCCT---CTG.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ACGACCACACCAGTGTCATGGATGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GACCACACCAGTGTCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGCATATCCTCGTATTAGATT-GA..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
............................CACCAGTGTCATGGATGAGGAGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGATT-GATTCCT---CTGG......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TCTACGACCACACCAGTGTCATGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ATCTACGACCACACCAGTGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
...................CTACGACCACACCAGTGTCATGGATGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCACCCGTCATAGGCATATCCTCGTA............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GACCACACCAGTGTCATGGATGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCCTCGTATTAGATT-G...................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AGTGTCATGGATGAGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................AA------GT------------ATAATGATAAG---CATTGG----.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
........................ACCACACCAGTGTCATGGATGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGATT-GATTCCT---CTGGAAT---2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........GGCGCGGATCTACGACCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCCTCGTATTAGATT-GAT.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCACCCGTCATAGGCATATCCTCG..............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GTGTCATGGATGAGGAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CATGGATGAGGAGGTGGGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AAAACCTGCCGGCGCGAATCTATGACCACACCAGTGTCATGGATGAGGAGGTGGGTTCCCAA---TCAAATTACT----TAGCCAT----------TGAGCACTGGA---AACTATAAA------------------------------------------------------------------------------------------------------------------------------------------------------C--------C----------------------------------ACA------AA-----GGATTAAATTTTTCTCCCTTAAT----ACTTAAAAATTACTGAGC----------------------------------------------------------------------------------------------------------------------TTC-T------------------ATTA-GAATTATTA----TAA---------------------------T-------TTT--------------TTGTTAC---------TT-TCT-TTTACAGTACTCACCCGTCATAGGCATATCCTCGTATTAGATT-GATTCCT---CTGGAAT---SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................GACCACACCAGTGTCATGGATGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0021000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCGTATTAGATT-GATTCCT---CTGG......2611.0011000000
..........................CACACCAGTGTCATGGATGAGGAGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.........................CCACACCAGTGTCATGGATGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAGATT-GATTCCT---CTGGAAT---2411.0010000010
.......................GACCACACCAGTGTCATGGATGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTCACCCGTCATAGGCATATCCT................................2611.0011000000
..........................CACACCAGTGTCATGGATGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
...............................CAGTGTCATGGATGAGGAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCACCCGTCATAGGCATATCCT................................2511.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTCACCCGTCATAGGCATATCCTC...............................2711.0010100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTAGATT-GATTCCT---CTG.......1911.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAGATT-GATTCCT---CTGGA.....2211.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACTCACCCGTCATAGGCATATCCT................................2711.0010000100
droYak3
AAAACCTGCCGGCGCGGATCTACGACCACACCAGTGTCATGGATGAGGAGGTGGGTTTCCAA---TCCAATTACT----TAACTATTAAT---------------------------------CAA------GT------------ATAATTGCAAT---GAGAGG----TGTTAAGACA---GA------------------------------------------------------------------------------------C--------------------------------------------------------------------CTTTCTTCCTTTAT----ATTTATAA--------GCTCCAAGT---------------------------------------------------------------------------------------------------------------TACAG------------------TTTA-TAATTATTA----TAA---------------------------C-------TTC--------------T-GTTAC---------TT-TTT-CTTACAGTACTCACCCGTCATAGGCATATCCTCGTATTAGATT-GATTCCT---CCGGAAT---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................CTACGACCACACCAGTGTCATGGATGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2814.00400000040000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCGTCATAGGCATATCCTCGT.............................2414.00401000030000
.......................GACCACACCAGTGTCATGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.00303000000000
....................TACGACCACACCAGTGTCATGGATGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300000030000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCACCCGTCATAGGCATA....................................2012.00202000000000
.......................GACCACACCAGTGTCATGGATGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00202000000000
.......................GACCACACCAGTGTCATGGATGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00202000000000
......................CGACCACACCAGTGTCATGGATGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00201000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCCTCGTATTAGATT-GATT................2212.00202000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGGCATATCCTCGTATTAGATT-GATT................2812.00202000000000
.......................GACCACACCAGTGTCATGGATGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000020000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAGATT-GATTCCT---CCGGA.....2211.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAGATT-GATTCCT---CC........1911.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATATCCTCGTATTAGATT-....................2011.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCGTATTAGATT-GATT................1811.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCGTCATAGGCATATCCTCGTA............................2411.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGATT-GATTCCT---CCGGA.....2011.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACTCACCCGTCATAGGC.......................................2011.00100000010000
..............CGGATCTACGACCACACCAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCATAGGCATATCCTCGT.............................2011.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATAGGCATATCCTCGTATTAGATT-G...................2711.00101000000000
.............................ACCAGTGTCATGGATGAGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...............................CAGTGTCATGGATGAGGAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.........................CCACACCAGTGTCATGGATGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGGCATATCCTCGTATTAGATT-G...................2511.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACTCACCCGTCATAGGCATA....................................2311.00100000100000
...................CTACGACCACACCAGTGTCATGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100001000000
....................................................................................................................................................................................................................................................................................................................................................................ATTTATAA--------GCTCCAAGT---------------------------------------------------------------------------------------------------------------TACAG------------------TTTA-TA.........................................................................................................................................................2811.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTAGATT-GATTCCT---CCGGG.....2111.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCACCCGTCATAGGCATATCCTC...............................2611.00101000000000
..AACCTGCCGGCGCGGATCTACGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.........................CCACACCAGTGTCATGGATGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTCACCCGTCATAGGCATATCCTC...............................2711.00101000000000
.........CGGCGCGGATCTACGACCACACCAGTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAGGCATATCCTCGTAT...........................1911.00101000000000
..AACCTGCCGGCGCGGATCTAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.AAACCTGCCGGCGCGGATCTAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGGCATATCCTCGTATTAGATT-GA..................2611.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCACCCGTCATAGGCATATCCT................................2311.00100000010000
.......................GACCACACCAGTGTCATGGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
....................TACGACCACACCAGTGTCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATCCTCGTATTAGATT-GATT................2311.00101000000000
...........................ACACCAGTGTCATGGATGAGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
...................CTACGACCACACCAGTGTCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.......................GACCACACCAGTGTCATGGATGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.AAACCTGCCGGCGCGGATCTACGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAGGCATATCCTCGTATTAGATT-....................2511.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTAGATT-GATTCCT---C.........1811.00110000000000
.............................................................................................................................A------GT------------ATAATTGCAAT---GAGAGG----T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACTCACCCGTCATAGGCATATC..................................2511.00101000000000
droEug1
AAAACCTGCCGGCCAGAATCTACGACCATACCAGTGTTATGGATGAGGAGGTGGGTTTTTAA---AAAGATAACT---------------------------------------------------ACTTGAAATTTTGTTTTTAATT------------------------------------------------------TGAAACAAAA----------------------------------------------------------------------------------------AGTA----------------AAGATATATTGATTTAATTT------------------TTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTATTTTTT------------------C-------------------TAC-TTTACAGTACTCACCCGTCATAGGCATATCCTCGTATTAGATT-GATTCCT---TTGGAAT---SizeHit CountTotal NormTotal
No Reads
droBia1
AAAACCTACCGGCCCGGATCTACGACCATACCAGTGTCATGGATGAGGAGGTGGGTCAAACT----------------------------------------------------------------ACTGACTG-------TTAAATT------------------------------------------------------AGAAGCAAAAAATATACTAATTATATTTAATTTTTTAATAATATAAAGG----------------A------------AGTCCCTC------------AGTA----------------ATGATATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA----------------------TGTTAT-------TTA--------------A-CTTA-------------TAT-CTTTCAGTACTCCCCCGTCATAGGCATATCCTCGTATTAGACT-GATTCCC---TTGGAAT---SizeHit CountTotal NormTotal
No Reads
droTak1
AGAACCTGCCGGCACGGATCTACGATCATACTAGTGTCATGGATGAGGAGGTGGGTTTCTAA---GCAGAATAATATTTTAATTAG----------TGATTAATACAAAA-------------------------------------------------------------------------------------------------------------------------------------------TAATACTACACACAAAAAAAA-----CA---AG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AAAACCTGCCGGCACGGATCTACGACCACACCAGTGTCATGGATGAGGAGGTGGGTTTTCAA---TCAGATTTCC--------------------------------------------------A------AT------------TTAACTATAATTTCTGAAGGAGAGTAAACGCCTTTTAAATTGGTTAA--------------------------------------------------------------------------A-------------GCCTCTA-----C------AAGTTTATGCCATTTTTTTT-----------------------TTTA-------------------------GT-------TTTGTTTTAAAC---------------------------------------TAGTATACATATCTTATACTATTTCTCTTAAAATCATGTTTTTATATAAAA---TCTAGTTTC-TTAAATTTATACAAATGCTTACAATGTTTTT-AAATACAATTTAACA------TCCATATATTATTATTTTTT------------------C-------------------TTA-TTTTCAGTACTCACCCGTCATAGGCATATCCTCGTACTAGATT-AATTCCA---TTGGAAT---SizeHit CountTotal NormTotal
No Reads
droRho1
AAAACCTGCCGGCACGGATCTACGACCACACCAGTGTCATGGATGAGGAGGTGGGTTTCCAT---TCAGATTGC--------------------------------------------------GA------GT------------TTAATTATAAT---TGTAGGGCGGTGAAAGGACATTGGACCGATTAAAATTCGTTTT-AAAAA------------TA-------------------------GCA----------------A-------------ACCTTTA-----A------AAGTTTGTCGCTCATATTTC-----------------------TTCT-------------------------GCTTTAAGGTTTATTTTAATATGATTAATATTAAAAAAAACTTTCAAAGATATTCTTGATTTATATACAT--------------------------TGTTTCTCTATATTA---TTTAGTTGA-T------------------GATA-TGATTTTTA----TAGCTCATCTACTAAACTCAT----TTA--T-----------TTTTT-----------TTAA---------TGTAAT-TTTACAGTACTCACCCGTCATAGGCATATCCTCGTACTAGATT-GATTCCA---TTGGAAT---SizeHit CountTotal NormTotal
No Reads
droFic1
AAAACCTGCCATCACGGATCTACGACCACACCAGTGTCATGGATGAGGAGGTGGGTTTCCAT---TCAGATAATT--------------------------------------------------------------------AAATTAAT----------------------------------------TGA-ATTATTTCGGAGGACAAACTTTATTCAT-------------------------TTA----------------ACTTTAAACA---AGCTGCTTAATTC-----------------------------------------------------------TTTCACTAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------TTTATTTTTGTTTC-------------------TAT-TTTACAGTACTCACCCGTCATAGGCATATCCTCGTATTAGATT-GG---------TGGAAT---SizeHit CountTotal NormTotal
No Reads
droKik1
AGAATCTGCCGGCAAGGATCTACGATCACACCAGTGTCATGGATGAGGAGGTGGGTTTTCAATATAAA----------------------------------------------------------ATTC-------------------------------------------------------------------------------------------------------------------------------ATTACATTAAAAT-----TA---AT----------------------------------------------------------------------TTCCAATAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------TCTACTCTTATTCT-------------------CCA-TTTCTAGTACTCACCCGTCATTGGCATATCCTCGTATTAGTTT-GATTCCTTTTTTGGCATCATSizeHit CountTotal NormTotal
No Reads
droAna3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCAGTACTCACCCGTTATAGGCATATCCTCGTATTAGATTTGATTCCT---TTGGAAT---SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTCACCCGTTATAGGCATATCCTC...............................2712.002200000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTCACCCGTTATAGGC.......................................1911.001000001
droBip1
TTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-CATTTC--------TT-GCA-CTTCCAGTACTCACCCGTAATAGGCATATCCTCGTATTAGATT-GATTCCT---TTGGAAT---SizeHit CountTotal NormTotal
No Reads
dp5
AAAATTTGCCAGCGCGCATCTACGATCATACCAGTGTCATGGATGAGGAGGTACGTGCTATA--------------CTTTAATTTT-----GT-----TTTACTACGACATAC-A--------------------------------------------------------------------------------------------------------------------------------------TA----------------GAT-------CTC-------------AGAATATAGAATTGTTACTCCTATTTCAAAA-----TTATTCCTT-------------T----TTTAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGT-------------TTATTTTTATCTA-------------------TTC-CTTATAGTACTCACCCGTTATAGGCATATCCTCGTATTAGAAC-G-------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................ATCTACGATCATACCAGTGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000201000
...........GCGCGCATCTACGATCATACCAGTGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010001000000
droPer2
AGAATTTGCCAGCGCGCATCTACGATCATACCAGTGTCATGGATGAGGAGGTACGTGCTATA--------------CTTTAATTTT-----GT-----TTTACTACAACA-------------------------------------------------------------------------------------------------------------------------------------------TA----------------GAT-------CTA-------------AAAATATAGAATTGTTACTCGTATTTCAAAA-----TTATTCCTT-------------T----TTTAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGT-------------TTATTTTTATGTA-------------------TTC-CTTATAGTACTCACCCGTTATAGGCATATCCTCGTATTAGAAC-G-------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....TTTGCCAGCGCGCATCTACGATCATACCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
...........GCGCGCATCTACGATCATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
droWil2
AAAATCTGCCGGCTCGCATCTATGATCACACCAGTGCTATGGATGAGGAGGTAAGCTATTTA---T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGA----------------G------------AGCCT-----------------TT----------------ATGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT---------------------------------------TTTTGTA---TACTTT-------AT-CATTACTTCATTATCC-TTG-TGCGCAGTATTCTCCCGTAATTGGCATATCATCGTATTAA------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................ATGATCACACCAGTGCTATGGATGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2817.00700700
............................CACCAGTGCTATGGATGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATTCTCCCGTAATTGGC.......................................2012.00202000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATTGGCATATCATCGT.............................1911.00100100
...........................ACACCAGTGCTATGGATGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.................ATCTATGATCACACCAGTGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCTCCCGTAATTGGCATATCATCGT.............................2911.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCTCCCGTAATTGGC.......................................1911.00101000
.........................TCACACCAGTGCTATGGATGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
......................TGATCACACCAGTGCTATGGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
............................CACCAGTGCTATGGATGAGGAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
AAAATCTGCCGGCTCGCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
........................ATCACACCAGTGCTATGGATGAGGAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
..........................CACACCAGTGCTATGGATGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
....................TATGATCACACCAGTGCTATGGATGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100
..............................CCAGTGCTATGGATGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
droVir3
AGAATCTAACTGCACGGATCTACGATCACACCAGCGTAATGGATGAGGAGGTAAGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------ACTCTACCCAA-------------------------ACA----------------AAC-------CCA-------------AACACAACATA----------------ATGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTC---------------------------------------TTCTTCT---TTCTTT-------A-------------------TTA-TCTCTAGTACTCACCCGTCATAGGCATATCGTCGTATTAGAG------CTT---TTGG------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCCGTCATAGGCATATCGT................................2211.001000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTCACCCGTCATAGGC.......................................1911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGTCGTATTAGAG------CT..............1811.001010000000000000000000000000000000000000000000000000000000000000
...........GCACGGATCTACGATCACACCAGCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...........GCACGGATCTACGATCACACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
......................CGATCACACCAGCGTAATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
AGAATCTACCCGCACGTATTTACGATCACACCAGCGTTATGGACGAGGAGGTAATAA--------ATA----------------------------------------------------------AATCACAA--------------------------------------------------------CTAAAACTATTTC-AG-------------------------------------------CC----------------AAT-------GC----------------------------------G------AAAA-----TCGTTCGTTTACCCCTTCTCACT----CTTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGT-------------CTCTTTTT------------------------CTC-TTTATAGTACTCACCCGTTATAGGCATATCGTCGTATTAGA----------------GGTT---SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATATCGTCGTATTAGA----------------.......1911.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGTCGTATTAGA----------------GGT....1911.001100000
.....................ACGATCACACCAGCGTTATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.............................ACCAGCGTTATGGACGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...........GCACGTATTTACGATCACACCAGCGTTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATATCGTCGTATTAGA----------------GGT....2211.001000001
droGri2
AGAATCTACCCGCACGCATCTACGATCACACCAGCGTCATGGATGAGGAGGTAACTATCACA----------------------------------------------------------------ACTCCAAA--------------------------------------------------------CTAAACTTATCCC-AAAAA----------------------------------------CA----------------AAT-------ACA-------------AAAACAAAAAAC---------------------------------C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT---------------------------------------TTCTT------------------C-------------------TTA-TCCGTAGTACTCACCCGTCATAGGCATATCGTCGTATTAGAG----CTTCT---TGGGTTT---SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGTCGTATTAGAG----CTTCT---TG........2311.00110
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTATTAGAG----CTTCT---TGGGT.....2111.00110

Generated: 05/18/2015 at 03:48 PM