ID:

dsi_11827

 Coordinate:

2l:12828989-12829172 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [2l_12829173_12829285_+]; CDS [2l_12829173_12829285_+]; exon [2l_12828922_12828988_+]; CDS [2l_12828922_12828988_+]; intron [2l_12828989_12829172_+]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCCGAAGGAGTGGACACATATCATTTGGTCAAATCAGCCAATCGCTACAAGTGAGTTTGAAAAGATATATTTTTCAGACATGTGGCAGTTTATTGAAAAGGGAATGCAATTTTAAATCCACGTCAGACTTTTTTACACTTTACCTTGACCTTTAATGAGCTGCCAGATGTCTTGTAACGCACGTACTTAATTTTTTCCAATTACTGACCTTAAATTTTCTTATGCAATCCGCAGGGAAGTAAAACGCACAGCTGGAGTCTCGACCACTGACCTTGTGGGCCGCA
**************************************************((.(((..((((((((.........((((((.(((((((((((((((((((.........................................))))....))))))))))))))).))))))(((...)))........)))))))).....))).))..............(((.....))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 O001
Testis
 SRR618934
dsim w501 ovaries
 M023
head
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
.....................................................................................................................................................................................................................................................GCACAGCTGGAGTCTCGACCACT................ 23 0 1 5.00 5 4 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................................................................................................AAACGCACAGCTGGAGTCTCGACCACT................ 27 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................CAGCTGGAGTCTCGACCAC................. 19 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................ACAGCTGGAGTCTCGACCAC................. 20 0 1 2.00 2 0 0 0 1 0 1 0 0 0 0
................................................................................................................................................................................................................................................AAAACGCACAGCTGGAGTCTCGACCACT................ 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................ATTTGGTCAAATCAGCCA.................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................CTACAAGGAAGTAAAACGCACAGCT............................... 25 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................AGTAAAACGCACAGCTGGAGTCTCGA..................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................TAAAACGCACAGCTGGAGTCTCGACC................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................AAAACGCACAGCTGGAGTCTCGACCA.................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................................................TAGCACTTTATTGAAAAGGGA..................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................................................................................................TGGAGTCTCGACCACTGACCTTGTGGGC.... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................ATATCATTTGGTCAAATCAGC...................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................ATCAGCCAATCGCTACAAGGAAGT.................................................................................................................................................................................................................................... 24 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................................TACAAGGAAGTAAAACGCACAGCTGG............................. 26 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...............................................................................................................TTAAATCGACGTCAGA............................................................................................................................................................. 16 1 9 0.11 1 0 0 0 0 0 0 0 0 0 1
..............................................................................................................TTTAAATCGACGTCAG.............................................................................................................................................................. 16 1 9 0.11 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................CCTCGAGCTTTGATGAGCT........................................................................................................................... 19 3 17 0.06 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................TCAGACTTGTTTAAACT................................................................................................................................................. 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CGGCTTCCTCACCTGTGTATAGTAAACCAGTTTAGTCGGTTAGCGATGTTCACTCAAACTTTTCTATATAAAAAGTCTGTACACCGTCAAATAACTTTTCCCTTACGTTAAAATTTAGGTGCAGTCTGAAAAAATGTGAAATGGAACTGGAAATTACTCGACGGTCTACAGAACATTGCGTGCATGAATTAAAAAAGGTTAATGACTGGAATTTAAAAGAATACGTTAGGCGTCCCTTCATTTTGCGTGTCGACCTCAGAGCTGGTGACTGGAACACCCGGCGT
**************************************************((.(((..((((((((.........((((((.(((((((((((((((((((.........................................))))....))))))))))))))).))))))(((...)))........)))))))).....))).))..............(((.....))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 M023
head
..........................................................................................................................................................TACTCGACGGTCTACAGAACA............................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................AAAAAAGGTGAATGACT............................................................................. 17 1 3 0.33 1 0 1 0 0 0 0
........................................................................................................................GAAGTCTGAAAAAATGTAAGAT.............................................................................................................................................. 22 3 4 0.25 1 0 0 0 0 1 0
......................................................................................................................GTGCAGTCTGACAAA....................................................................................................................................................... 15 1 5 0.20 1 0 0 0 1 0 0
.............................................ATGTTCACTCTAACT................................................................................................................................................................................................................................ 15 1 20 0.15 3 0 0 3 0 0 0
..................CTAGAAAACCAGTTTAGGCG...................................................................................................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 1
..................................................................................................................................................................GGTCTACACAACCTTGC......................................................................................................... 17 2 10 0.10 1 0 1 0 0 0 0
.................................................................................................................................................................................................................................................................AGAGCCGGTGCCTGGAA.......... 17 2 10 0.10 1 0 0 1 0 0 0
.............................................................................................................................................................................................AAAAAAAGGTGAATGACT............................................................................. 18 2 17 0.06 1 0 0 0 1 0 0
.............................................ATGTTCACTCTAACTT............................................................................................................................................................................................................................... 16 1 20 0.05 1 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:12828939-12829222 + dsi_11827 GCCGAAGGAGTGGACACATATCATTTGGTCAAATCAGCCAATCGCTACAAGTGAGTTTGAAAAGATATATT---TTTCAGACAT--GTGGCAGTTTATTGAAAAGGG--AATGCAAT----TTTAAATCCACGT---CAGACT--------------------------------------------------TTTTTACACTTT------------------ACCTT----------GACCTTTAATGAGCTGCCAGATGTCT-TGTAACGCACGT----ACTTA--ATTT-------------------------------------------------------------------------------------------TTT------------------------------------------------------------CC----------------------AATTACTGACCTTAAA-----------------TTTTCTTATGCAATCCGCAGGGAAGTAAAACGCACAGCTGGAGTCTCGACCACTGACCTTGTGGGCCGCA
droSec2 scaffold_16:1362934-1363146 + dse_888 GCCGAAGGAGTGGACACATATCATTTGGTCAAATCAGCCAATCGCTACAAGTGAGTTTGAAAAGATATATT----TTAAGATAT--A-------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAAGTTGTCAGATGTCT-TGTAACGCACGT----ACTGC--ATTA-------------------------------------------------------------------------------------------TTT------------------------------------------------------------CC----------------------ATTTACTGACCTTAAA-----------------TTTTCTTATGCAATCCGCAGGGAAGTAAAACGCACAGCTGGAGTTTCGACCACTGACCTTGTGGGCCGCA
dm3 chr2L:13208438-13208714 + GCCGAAGGAGTGGACACATATCATTTGGTCAAATCAGCCAATCGCTACAAGTGAGTTTGAAAAGATATATT---TTTAAGACAT--GTGGCAGTTTATTAAAAAGGG--AATGCA----------------CAC---ACACTT--ACCT--------------------------------------------TATGTACATCTT------------------GCCTT----------AACCTTTAATAAGCTGCCAGTTGTCT-TGTAAAGCACGT----ACTGCACA-TT-------------------------------------------------------------------------------------------TTT------------------------------------------------------------CC----------------------AATTACTGACCTTAAA-----------------TTTTCTTATGCAATCCGCAGGGAAGTGAAACGCACAGCTGGAGTCTCGACCACTGACCTTGTGGGCCGCA
droEre2 scaffold_4929:12230654-12230912 - GCCGAAGGAGTGGACACATATCATTTGGTCAAGTCAGCTAATCGCTACAAGTGAGTAGGA-ATGACATAAT---TTTCAGACAT--GTGGCAGTTTATTGAAAAGGG--AATCCA------------------------------------------------------------------------------TATGTAACCTTT------------------GCCTT----------GATCTTTAATAAACTGTTAGTTGTCT-TATAACGCACGT----ACTTT--ATA--------------------------------------------------------------------------------------------TTA------------------------------------------------------------CC----------------------ACTTACCAA--TTAAA-----------------TTTCCTTATGCCATCTCCAGGGAAGTAAAACGCACAGCTGGAGTTTCGACCACTGACCTTGTGGGCCGCA
droYak3 2L:9632097-9632387 + GCCGAAGGAGTGGACACATATCATTTGGTCAAGTCAGCTAATCGCTACAAGTGAGTATGAA-TGATATAAT---TTTCAGACATTTTTGGCGGTTTATAAAAAATAT--TTTGAAAT----TTGAAATCTACATACGACACAT--ACGA--------------------------------------------TTTGTATACGTT------------------GCCGT----------GACCTTTAATTAACCGCTAGTTGTCT-TGTAACGCACGT----ACTAT--ATT--------------------------------------------------------------------------------------------TTA------------------------------------------------------------CC----------------------AATTACTGACATCAAA-----------------TTTTCTTATGCAATCCGCAGGGAAGTAAAACGCACAGCTGGAGTTTCGACCACTGACCTTGTGGGCCGCA
droEug1 scf7180000409554:188848-189065 - GCCGAAGGAGTTGACACATATCATTTAGTCAAGTCAGCCAATCGTTATAAGTGAGTATGAAATGATATTTC---TATC-GGCAT--T--------------------------------------------------------------------------------------------------------------------------------------------T----------GCCCTTTAATAAACTGTCAGCTGTCT-TATATTCCACGT----TCCTA--G---------------------------------------------------------------T------------------------------TTT------------------------------------------------------------CC----------------------AATAACTGACTTTAAA-----------------TTTCTTTATGCAATCCACAGGGAAGTGAGACGCACTGCTGGAGTTTCGACCACCGACCTTGTGGGTCGCA
droBia1 scf7180000302408:3159892-3160070 - GCCGAAGGAGTGGACACATATCATTTGGTCAAGTCAGCCAATCGCTATAAGTGAGTATA-T--------------------------------------------------------------------------------------C------------------------------------------------------------------------------------------------TAA-----AGCCAGCTACTC-TACAGACCCCTT----TCT------------------------------------------------------------------------------------------------------GAAATGTT----------------------------------------------------CC----------------------CATAACTAACACTTCA-------------------------TTTTACCTGCAGGGAAGTGAAACGTACTGCCGGAGTCTCGACCACCGACCTTGTGGGTCGCA
droTak1 scf7180000415287:167350-167573 + GCCGAAGGAGTGGACACATATCACTTGGTCAAGTCAGCCAATCGCTATAAGTGAGTGTGCA-----ACATT---TTCCAGACAT--TTGGCAGTTTATTCAAAAAGATTAATGAA--------------------------------------------------------------------------------------------------------------------------------------ATCTGGCAGCTGTCCCTTGAAATCACTC----TTT-------------------------------------------------------------------GT--------------------------------------ATT----------------------------------------------------CA----------------------AATAACTAATATATAT----------------------TTTTCTAATTCGCAGGGAAGTGAAACGTACTGCCGGAGTTTCGACCACCGACCTTGTGGGTCGCA
droEle1 scf7180000491338:801046-801334 + GCGGAAGGAGTAGACACATATCATTTGGTCAAGTCGGCCAACCGCTATAAGTAAGTGTAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAATTGGAAGATACATAAGTAAAGTAATCGATTTGTTAAAGAACTTTAGAATTCCTAACATTGTATTATTTAAACATATATTGAATATTCCTGAAATGTTTTAACCTTAATT------------------------------------TCTGACAATAATCATACTTGATTACTATATATACTGACCTTCAA-----------------TTTGCTTATGCCATCCGCAGGGAAGTCAGACGCACTGCTGGCGTTTCGACCACCGACCTTGTGGGTCGCA
droRho1 scf7180000777955:23207-23460 + GCGGAAGGAGTCGACACATATCATTTGGTCAAGTCGGCTAATCGCTATAAGTAAGTATACAAAGTCTTATTGAAAT--------------------------AAAGCCTTAAGAAATATATTTTGT-TCCA--TTGGCAAAAT--------------------------------------------------TTTCTTCTTTGT------------------GCTTT-------------TTTTAA-----TGTCAGCTTTCT--GTCTTCT---------CT------TT-------------------------------------------------------------------------------------------TTTTAA---------------------------------------------------------AT----------------------ATATACTAAAATTAAA-----------------TTTTCTTATGCAATCTACAGGGAAGTTAGACGCACTGCTGGCGTTTCGACCACCGATCTTGTGGGTCGCA
droFic1 scf7180000453925:800270-800602 - GCGGAAGGAGTGGACACATATCATTTGGTCAAATCAGCCAATCGCTATAAGTAAGTATATACAGACATGTT---TTCTAGGTAT--TAG------------------------AAAT-CATAATGC-TGCA--TTGGCAAAATACATCTTATGTCCAGTTACTTTTCTGTTTCGAAATTAAAGAAATGAATTGAATATAATCTTTATCTTTATCGATTTGTTTCACTTAACATTTAATGCTCTTCAAGCAACCG-------------TAAAATTCGTATGACCTTT--G---------------------------------------------------------------A------------------------------CTT------------------------------------------------------------TC----------------------ACAAACTAATACTTGA-----------------TTTTCTTGTGCTCTTTTCAGGGAAGTCAGACGCACAGCTGGCGTTTCGACTACCGACTTGGTTGGCCGCA
droKik1 scf7180000302468:1390358-1390586 + GCGGAGGGTGTGGACACATATCATTTGGTCAAATCAGCTAATCGCTACAAGTGAGTACAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGATAAGTT-----TTGACT-GGAGATGTATGT----AA---------------------------------AT-A---------------------------------------------------------------TTA-----------------AACACAATATCGATTTATACAACAAACAAAAAACAATGTTG--------------------------TATCATTAATCTATACAATG--------------TTCAATCGATTTCTTACAGGGAAGTAAGACGTACGGCTGGCGTCTCGACCACTGACCTGGTAGGTCGAA
droAna3 scaffold_12916:10857350-10857410 + GCCGAGGGAGTGGATACATACCATCTCGTCAAGTCAGCTAACCGCTACAGGTGAGTCAGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396572:520226-520329 + ACA-------------CACTTTATTCGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----------------------TGGGGATAATTTTAAA-----------------CCTTTATCTCTGTTTTTCAGGGAAGTCCGCCGCACGGCAGGAGTCTCTACTACAGATCTTGTGGGTCGCA
dp5 4_group4:4131539-4131714 - GCCGAGGGCGTCGATACATATCACCTGGTCAAGTCGGCCAATCGCTACAAGTGAGTATTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAAGGGATTGTTTCATGAATCGAACT--------------AAACTTTGGCATTCTTTTT--------------------------------------ATC------------------------------------------------------------------------------------------------------------------CATTCCAATCCTTAGGGAGGTACGACGCACAGCTGGTGTCTCGACAACCGATTTGGTGGGTCGCA
droPer2 scaffold_10:3173740-3173915 - GCCGAGGGCGTCGATACATATCACCTGGTCAAGTCGGCCAATCGCTACAAGTGAGTATTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAAGGGATTGTTTCATGAATCGAACT--------------AAACTTTGGCATTCTTTTT--------------------------------------ATC------------------------------------------------------------------------------------------------------------------CATTCCAATCCATAGGGAGGTACGACGCACAGCTGGTGTCTCGACAACCGATTTGGTGGGTCGCA
droWil2 scf2_1100000004521:12161362-12161433 - A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------TTATTTTGTCCTTTTTGCAGGGAAGTCAAACGTACAGCAGGAGTTTCGACAACTGATTTAGTTGGCCGCA
droVir3 scaffold_4534:5171-5226 + GCTGAGGGTGTGGATACCTATCATCTGGTGAAGTCGGCTAACCGTTACAAGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:15230147-15230327 + GCCGAGGGTGTCGACACATATCATCTGGTCAAGTCGGCCAACCGTTATAAGTGAGTCACT-----------------CACACAT--AT-----------------------------------------------------------C--------------------------------------------------------------------------------------------------------------------------------------------------GAAGGTGTAAT-CTATAGCTAATCTT--------------ACACTCTTTCACGCTCTCC--------------------------------------CT-------------------------------------------------------------------------------------------------------------------CTCTGCTCGTCACAGGGAAGTGAAGCGCACCGCTGGCGTTTCGACCACAGACCTGGTGGGTCGCA
droGri2 scaffold_15252:4048116-4048310 + GCAGAGGGTGTCGACACCTATCATCTGGTCAAGTCGGCCAATCGTTACAAGTAAGTGCTGG----CCTACT---TAATAATTAT--ATGGGCGTCTATTTATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACTAACCTTTCGATTGTTTGGTATATAATTCTCGTCTCGCTCACTGCAGGGAAGTCAAGCGGACCGCCGGCGTATCAACCACAGACCTAGTTGGTCGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCCGAAGGAGTGGACACATATCATTTGGTCAAATCAGCCAATCGCTACAAGTGAGTTTGAAAAGATATATT---TTTCAGACAT--GTGGCAGTTTATTGAAAAGGG--AATGCAAT----TTTAAATCCACGT---CAGACT--------------------------------------------------TTTTTACACTTT------------------ACCTT----------GACCTTTAATGAGCTGCCAGATGTCT-TGTAACGCACGT----ACTTA--ATTT-------------------------------------------------------------------------------------------TTT------------------------------------------------------------CC----------------------AATTACTGACCTTAAA-----------------TTTTCTTATGCAATCCGCAGGGAAGTAAAACGCACAGCTGGAGTCTCGACCACTGACCTTGTGGGCCGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACAGCTGGAGTCTCGACCACT................2315.00500400000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGCACAGCTGGAGTCTCGACCACT................2713.00300300000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGGAGTCTCGACCAC.................1913.00300300000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCTGGAGTCTCGACCAC.................2012.00210001000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACGCACAGCTGGAGTCTCGACCACT................2811.00100000001000000000
......................ATTTGGTCAAATCAGCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAAAACGCACAGCTGGAGTCTCGA.....................2611.00100000001000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAACGCACAGCTGGAGTCTCGACC...................2611.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACGCACAGCTGGAGTCTCGACCA..................2611.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGTCTCGACCACTGACCTTGTGGGC....2811.00100000001000000000
.................ATATCATTTGGTCAAATCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
droSec2
GCCGAAGGAGTGGACACATATCATTTGGTCAAATCAGCCAATCGCTACAAGTGAGTTTGAAAAGATATATT----TTAAGATAT--A-------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAAGTTGTCAGATGTCT-TGTAACGCACGT----ACTGC--ATTA-------------------------------------------------------------------------------------------TTT------------------------------------------------------------CC----------------------ATTTACTGACCTTAAA-----------------TTTTCTTATGCAATCCGCAGGGAAGTAAAACGCACAGCTGGAGTTTCGACCACTGACCTTGTGGGCCGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....AAGGAGTGGACACATATCATTTGGTCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAAAACGCACAGCTGGA............................1911.0010010
.................................................................................................................................................................................................................................................................GATGTCT-TGTAACGCACC.........................................................................................................................................................................................................................................................................................................1811.0010001
dm3
GCCGAAGGAGTGGACACATATCATTTGGTCAAATCAGCCAATCGCTACAAGTGAGTTTGAAAAGATATATT---TTTAAGACAT--GTGGCAGTTTATTAAAAAGGG--AATGCA----------------CAC---ACACTT--ACCT--------------------------------------------TATGTACATCTT------------------GCCTT----------AACCTTTAATAAGCTGCCAGTTGTCT-TGTAAAGCACGT----ACTGCACA-TT-------------------------------------------------------------------------------------------TTT------------------------------------------------------------CC----------------------AATTACTGACCTTAAA-----------------TTTTCTTATGCAATCCGCAGGGAAGTGAAACGCACAGCTGGAGTCTCGACCACTGACCTTGTGGGCCGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................ATAAGCTGCCAGTTGTCT-TGTA................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATTTGGTCAAATCAGCCAATCGCTAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGCTGGAGTCTCGACC...................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGGAGTCTCGACCACT................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGACCTTGTGGGCCGCA1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CATATCATTTGGTCAAATCAGCCAATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................ATAAGCTGCCAGTTGTCT-TGT.................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGGAGTCTCGACCACTGACC............2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTGAAACGCACAGCTGG.............................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................ATAAGCTGCCAGTTGTCT-TGA.................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGGAGTCTCGACCACTGACC............2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAACGCACAGCTGGA............................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCACAGCTGGAGTCTCGACCACT................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACGCACAGCTGGAGTCTC.......................2112.0020000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAAACGCACAGCTGGA............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CGAAGGAGTGGACACATATCATTTGGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................GTCAAATCAGCCAATCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAAACGCACAGCTGG.............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...................................................................................T--GTGGCAGTTTATTAAAAAGGG--A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...................................................................................T--GTGGCAGTTTATTAAAAAGGG--AATGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
........AGTGGACACATATCATTTGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................AAATCAGCCAATCGCTACAAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATTTGGTCAAATCAGCCAATCGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCACAGCTGGAGTCTC.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAACGCACAGCTGGAGTCTCGACC...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GCCGAAGGAGTGGACACAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGGACACATATCATTTGGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACGCACAGCTGGAGTCTCGACCAC.................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTCGACCACTGACCTTGT........2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TATTAAAAAGGG--AATGCA----------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGAGTCTCGACCACTGACC............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ATATCATTTGGTCAAATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGGAGTCTCGACCACT................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................T------------------GCCTT----------AACCTTTAATAAG..................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCACTGACCTTGTGGGC....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGAGTCTCGACCACTGACCTT..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AAGGAGTGGACACATATCATTTGGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACAGCTGGAGTCTCGAA....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TCAAATCAGCCAATCGCTACAAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................CAAATCAGCCAATCGCTACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TATCATTTGGTCAAATCAGCCAATCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCACAGCTGGAGTCTCGA.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GCCGAAGGAGTGGACACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
........AGTGGACACATATCATTTGGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAAACGCACAGCTGGAGTC.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.....................CATTTGGTCAAATCAGCCAATCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCACAGCTGGAGTCTCGACC...................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAACGCACAGCTGGAGTCTCGACCAC.................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....AGGAGTGGACACATATCATTTGGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................................AT--GTGGCAGTTTATTAAAAAGGG--AA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACGCACAGCTGGAGTCT........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GCCGAAGGAGTGGACACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................................................TTAAGACAT--GTGGCAGTTTATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.............................................................................................................................................................................................................................................................GCCAGTTGTCT-TGTAAAGCACGT----....................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCACAGCTGGAGTCTCGACCACTGA..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGTCTCGACCACTGACCTTGTGG......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGAAACGCACAGCTGG.............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACGCACAGCTGGAGTCTCGA.....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGCACAGCTGGAGTCTCGACC...................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGGAGTCTCGACCACTGACCT...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCTGGAGTCTCGACC...................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................AATCAGCCAATCGCTACAAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACAGCTGGAGTCTCGAC....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAACGCACAGCTGGAGTCT........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGAGTCTCGACCACTGA..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGCTGGAGTCTC.......................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGTCTCGACCACTGACCTTGTGGGCC...2911.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCACAGCTGGAGTCTC.......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAAACGCACAGCTGGAGTCTC.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ATCAGCCAATCGCTACAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCTGGAGTCTCGACCACT................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TGTAAAGCACGT----ACTGCCGC-...........................................................................................................................................................................................................................................................................................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GCCGAAGGAGTGGACACATATCATTTGGTCAAGTCAGCTAATCGCTACAAGTGAGTAGGA-ATGACATAAT---TTTCAGACAT--GTGGCAGTTTATTGAAAAGGG--AATCCA------------------------------------------------------------------------------TATGTAACCTTT------------------GCCTT----------GATCTTTAATAAACTGTTAGTTGTCT-TATAACGCACGT----ACTTT--ATA--------------------------------------------------------------------------------------------TTA------------------------------------------------------------CC----------------------ACTTACCAA--TTAAA-----------------TTTCCTTATGCCATCTCCAGGGAAGTAAAACGCACAGCTGGAGTTTCGACCACTGACCTTGTGGGCCGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................CATTTGGTCAAGTCAGCTAATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTGACCTTGTGGGCCGCA2111.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTTCGACCACTGACCTTGT........2211.0011000000
....................TCATTTGGTCAAGTCAGCTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
........................TTGGTCAAGTCAGCTAATCGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGTTTCGACCACTGACCTTG.........2411.0011000000
.....AGGAGTGGACACATATCATTTGGTCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCACAGCTGGAGTTTCGACC...................2311.0010000100
..........TGGACACATATCATTTGGTCAAGTCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
droYak3
GCCGAAGGAGTGGACACATATCATTTGGTCAAGTCAGCTAATCGCTACAAGTGAGTATGAA-TGATATAAT---TTTCAGACATTTTTGGCGGTTTATAAAAAATAT--TTTGAAAT----TTGAAATCTACATACGACACAT--ACGA--------------------------------------------TTTGTATACGTT------------------GCCGT----------GACCTTTAATTAACCGCTAGTTGTCT-TGTAACGCACGT----ACTAT--ATT--------------------------------------------------------------------------------------------TTA------------------------------------------------------------CC----------------------AATTACTGACATCAAA-----------------TTTTCTTATGCAATCCGCAGGGAAGTAAAACGCACAGCTGGAGTTTCGACCACTGACCTTGTGGGCCGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAACGCACAGCTGGAGTTTC.......................2312.00200200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAACGCACAGCTGGAGTTT........................2211.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTTCGACCACTGACCTTGTGGGC....2611.00100100000000
............................................CTACAAGTGAGTATGAA-TGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.CCGAAGGAGTGGACACATATCATTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000100000
GCCGAAGGAGTGGACACATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACGCACAGCTGGAGTTTCGAC....................2411.00100000010000
........................TTGGTCAAGTCAGCTAATCGCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
..........................GGTCAAGTCAGCTAATCGCTACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAACGCACAGCTGGAGT..........................2011.00100100000000
droEug1
GCCGAAGGAGTTGACACATATCATTTAGTCAAGTCAGCCAATCGTTATAAGTGAGTATGAAATGATATTTC---TATC-GGCAT--T--------------------------------------------------------------------------------------------------------------------------------------------T----------GCCCTTTAATAAACTGTCAGCTGTCT-TATATTCCACGT----TCCTA--G---------------------------------------------------------------T------------------------------TTT------------------------------------------------------------CC----------------------AATAACTGACTTTAAA-----------------TTTCTTTATGCAATCCACAGGGAAGTGAGACGCACTGCTGGAGTTTCGACCACCGACCTTGTGGGTCGCASizeHit CountTotal NormTotal
No Reads
droBia1
GCCGAAGGAGTGGACACATATCATTTGGTCAAGTCAGCCAATCGCTATAAGTGAGTATA-T--------------------------------------------------------------------------------------C------------------------------------------------------------------------------------------------TAA-----AGCCAGCTACTC-TACAGACCCCTT----TCT------------------------------------------------------------------------------------------------------GAAATGTT----------------------------------------------------CC----------------------CATAACTAACACTTCA-------------------------TTTTACCTGCAGGGAAGTGAAACGTACTGCCGGAGTCTCGACCACCGACCTTGTGGGTCGCASizeHit CountTotal NormTotal
No Reads
droTak1
GCCGAAGGAGTGGACACATATCACTTGGTCAAGTCAGCCAATCGCTATAAGTGAGTGTGCA-----ACATT---TTCCAGACAT--TTGGCAGTTTATTCAAAAAGATTAATGAA--------------------------------------------------------------------------------------------------------------------------------------ATCTGGCAGCTGTCCCTTGAAATCACTC----TTT-------------------------------------------------------------------GT--------------------------------------ATT----------------------------------------------------CA----------------------AATAACTAATATATAT----------------------TTTTCTAATTCGCAGGGAAGTGAAACGTACTGCCGGAGTTTCGACCACCGACCTTGTGGGTCGCASizeHit CountTotal NormTotal
No Reads
droEle1
GCGGAAGGAGTAGACACATATCATTTGGTCAAGTCGGCCAACCGCTATAAGTAAGTGTAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAATTGGAAGATACATAAGTAAAGTAATCGATTTGTTAAAGAACTTTAGAATTCCTAACATTGTATTATTTAAACATATATTGAATATTCCTGAAATGTTTTAACCTTAATT------------------------------------TCTGACAATAATCATACTTGATTACTATATATACTGACCTTCAA-----------------TTTGCTTATGCCATCCGCAGGGAAGTCAGACGCACTGCTGGCGTTTCGACCACCGACCTTGTGGGTCGCASizeHit CountTotal NormTotal
No Reads
droRho1
GCGGAAGGAGTCGACACATATCATTTGGTCAAGTCGGCTAATCGCTATAAGTAAGTATACAAAGTCTTATTGAAAT--------------------------AAAGCCTTAAGAAATATATTTTGT-TCCA--TTGGCAAAAT--------------------------------------------------TTTCTTCTTTGT------------------GCTTT-------------TTTTAA-----TGTCAGCTTTCT--GTCTTCT---------CT------TT-------------------------------------------------------------------------------------------TTTTAA---------------------------------------------------------AT----------------------ATATACTAAAATTAAA-----------------TTTTCTTATGCAATCTACAGGGAAGTTAGACGCACTGCTGGCGTTTCGACCACCGATCTTGTGGGTCGCASizeHit CountTotal NormTotal
No Reads
droFic1
GCGGAAGGAGTGGACACATATCATTTGGTCAAATCAGCCAATCGCTATAAGTAAGTATATACAGACATGTT---TTCTAGGTAT--TAG------------------------AAAT-CATAATGC-TGCA--TTGGCAAAATACATCTTATGTCCAGTTACTTTTCTGTTTCGAAATTAAAGAAATGAATTGAATATAATCTTTATCTTTATCGATTTGTTTCACTTAACATTTAATGCTCTTCAAGCAACCG-------------TAAAATTCGTATGACCTTT--G---------------------------------------------------------------A------------------------------CTT------------------------------------------------------------TC----------------------ACAAACTAATACTTGA-----------------TTTTCTTGTGCTCTTTTCAGGGAAGTCAGACGCACAGCTGGCGTTTCGACTACCGACTTGGTTGGCCGCASizeHit CountTotal NormTotal
No Reads
droKik1
GCGGAGGGTGTGGACACATATCATTTGGTCAAATCAGCTAATCGCTACAAGTGAGTACAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGATAAGTT-----TTGACT-GGAGATGTATGT----AA---------------------------------AT-A---------------------------------------------------------------TTA-----------------AACACAATATCGATTTATACAACAAACAAAAAACAATGTTG--------------------------TATCATTAATCTATACAATG--------------TTCAATCGATTTCTTACAGGGAAGTAAGACGTACGGCTGGCGTCTCGACCACTGACCTGGTAGGTCGAASizeHit CountTotal NormTotal
No Reads
droAna3
GCCGAGGGAGTGGATACATACCATCTCGTCAAGTCAGCTAACCGCTACAGGTGAGTCAGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........GTGGATACATACCATCTCGTCAAGTCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.....................CATCTCGTCAAGTCAGCTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droBip1
ACA-------------CACTTTATTCGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----------------------TGGGGATAATTTTAAA-----------------CCTTTATCTCTGTTTTTCAGGGAAGTCCGCCGCACGGCAGGAGTCTCTACTACAGATCTTGTGGGTCGCASizeHit CountTotal NormTotal
No Reads
dp5
GCCGAGGGCGTCGATACATATCACCTGGTCAAGTCGGCCAATCGCTACAAGTGAGTATTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAAGGGATTGTTTCATGAATCGAACT--------------AAACTTTGGCATTCTTTTT--------------------------------------ATC------------------------------------------------------------------------------------------------------------------CATTCCAATCCTTAGGGAGGTACGACGCACAGCTGGTGTCTCGACAACCGATTTGGTGGGTCGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................GTCGGCCAATCGCTACAAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGCTGGTGTCTCGA.....................1911.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTACGACGCACAGCTGGTGTCTCGAC....................2711.0010100000000
...........................GTCAAGTCGGCCAATCGCTACAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCGACAACCGATTTGGTG.......2111.0010100000000
..................TATCACCTGGTCAAGTCGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000000
....................TCACCTGGTCAAGTCGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.................ATATCACCTGGTCAAGTCGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
droPer2
GCCGAGGGCGTCGATACATATCACCTGGTCAAGTCGGCCAATCGCTACAAGTGAGTATTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAAGGGATTGTTTCATGAATCGAACT--------------AAACTTTGGCATTCTTTTT--------------------------------------ATC------------------------------------------------------------------------------------------------------------------CATTCCAATCCATAGGGAGGTACGACGCACAGCTGGTGTCTCGACAACCGATTTGGTGGGTCGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGCTGGTGTCTCGACAACC................2413.003300000
GCCGAGGGCGTCGATACATATCACCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002000002
............GATACATATCACCTGGTCAAGTCGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
...................ATCACCTGGTCAAGTCGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTACGACGCACAGCTGGT............................2111.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGCACAGCTGGTGTCTCG......................2111.001010000
...................ATCACCTGGTCAAGTCGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCTCGACAACCGAGG............1820.501010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCTCGACAACCGAAG............1840.251010000
droWil2
A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------TTATTTTGTCCTTTTTGCAGGGAAGTCAAACGTACAGCAGGAGTTTCGACAACTGATTTAGTTGGCCGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAACGTACAGCAGGA............................1812.00202000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAGCAGGAGTTTCGACAAC.................2212.00200020
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTACAGCAGGAGTTTCGAC....................2212.00200011
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGTACAGCAGGAGTTTCGA.....................2211.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACGTACAGCAGGAGTTTCGACAAC.................2711.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAGCAGGAGTTTCGACA...................2011.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAGCAGGAGTTTCGAC....................1911.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGGAGTTTCGACAACTG...............2011.00100001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTTTCGACAACTGATTTAGT........2311.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGGAGTTTCGACAAC.................1811.00100010
droVir3
GCTGAGGGTGTGGATACCTATCATCTGGTGAAGTCGGCTAACCGTTACAAGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................CTGGTGAAGTCGGCTAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.002000100000100000000000000000000000000000000000000000000000000000
.........................TGGTGAAGTCGGCTAACCGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.002000000200000000000000000000000000000000000000000000000000000000
.......................TCTGGTGAAGTCGGCTAACCGTTACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.501001000000000000000000000000000000000000000000000000000000000000
......................ATCTGGTGAAGTCGGCTAACCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.501000000000100000000000000000000000000000000000000000000000000000
..................TATCATCTGGTGAAGTCGGCTAACCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.501000000000000000000000000001000000000000000000000000000000000000
.............................GAAGTCGGCTAACCGTTAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501000000000000000000000000000001000000000000000000000000000000000
..........................GGTGAAGTCGGCTAACCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501000000001000000000000000000000000000000000000000000000000000000
..........................GGTGAAGTCGGCTAACCGTTACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.501000000000000000000100000000000000000000000000000000000000000000
............................TGAAGTCGGCTAACCGTTAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501000000000000000000000000000000000010000000000000000000000000000
........................CTGGTGAAGTCGGCTAACCGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.501000000000000000010000000000000000000000000000000000000000000000
GCTGAGGGTGTGGATACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501000000000000000000000000000010000000000000000000000000000000000
droMoj3
GCCGAGGGTGTCGACACATATCATCTGGTCAAGTCGGCCAACCGTTATAAGTGAGTCACT-----------------CACACAT--AT-----------------------------------------------------------C--------------------------------------------------------------------------------------------------------------------------------------------------GAAGGTGTAAT-CTATAGCTAATCTT--------------ACACTCTTTCACGCTCTCC--------------------------------------CT-------------------------------------------------------------------------------------------------------------------CTCTGCTCGTCACAGGGAAGTGAAGCGCACCGCTGGCGTTTCGACCACAGACCTGGTGGGTCGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGACCACAGACCTGGTGGGTCG..2511.001100000
GCCGAGGGTGTCGACACAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCGCTGGCGTTTCGACC...................2011.001000001
..CGAGGGTGTCGACACATATCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACCGCTGGCGTTTCGACC...................2111.001000001
.....................CATCTGGTCAAGTCGGCCAACCGTTATAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
.............ACACATATCATCTGGTCAAGTCGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
droGri2
GCAGAGGGTGTCGACACCTATCATCTGGTCAAGTCGGCCAATCGTTACAAGTAAGTGCTGG----CCTACT---TAATAATTAT--ATGGGCGTCTATTTATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACTAACCTTTCGATTGTTTGGTATATAATTCTCGTCTCGCTCACTGCAGGGAAGTCAAGCGGACCGCCGGCGTATCAACCACAGACCTAGTTGGTCGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................CCTATCATCTGGTCAAGTCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTCAAGCGGACCGCCGGCG...........................2211.00101
...........................GTCAAGTCGGCCAATCGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
GCAGAGGGTGTCGACACCTATCATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110

Generated: 05/19/2015 at 12:25 AM