ID:

dsi_11826

 Coordinate:

2l:5831777-5831965 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.6 -14.8

Flybase annnotation

exon [2l_5830787_5832446_-]; CDS [2l_5830787_5832320_-]

No Repeatable elements found

Sense Strand Reads

#################################################################################################################################################################################################################################################################################################
TCTGGGCGTGATTGCGCGCGTGGAGAAGATTGGCGGCGCCACGTCGCGCGGTGAGAACTCGTACGGCATCGAGATTTTCTGCAAGGACATGCGAAACCTGCGATTCGCCCACAAGCAGCAGAATCATTCGCGGAGGACGGTGTTTGAGAAACTGCAGGCCAACGCCTTTCCGCTCTCGTACAGTGGACGCCTCTTTGCATTCGCACACGCCGCGGCCAACTCTGTGAACGGGAATGGAGGCTGGGACGGCTGGGCGGTATATGAACCGCTGGCGGAGCTGCGCCGCTTG
********************************************************************************************************************.((...........((((((.((..(((((........)))))...)))))..)))..........))********************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
.............................................................................................................................................................GCCAACGCCTTTCCGCTCTCGTACAGT......................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................CCCTGGCGGAGCTGCGCCGCT.. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................TGGGCGGTATATGAACCGCTGGCGGAGC........... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................................................................AGCAGAATCATTCGCGGAGGACGGT.................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0
..................................................................................................................................................................................................................CGCGGCCAACTCTGTGAACGGGAAT...................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................CGCGGCCAACTCTGTGAACGG.......................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0
...........................................TCGCGCGGTGAGAACTCG.................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...................................................................ATCGAGATTTTCTGCAAGGAC......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0
..............................................................................CTGCAAGGACATGCGAAACC............................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0
...................................................................................................................................................GAAACTGCAGGCCAACGCCTTTCC...................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................TGAGAAACTGCAGGCCAACGCCTTTC....................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............TGCGCGCGTGGAGAAGATTGG................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0
................................................................................GCAAGGACATGCGAAACCT.............................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................................TGGGACGGCTGGGCGGTATATGAAC....................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.........GATTGCGCGCGTGGAG........................................................................................................................................................................................................................................................................ 16 0 2 0.50 1 0 1 0 0 0 0 0 0 0
........TGATTGCGCGCGTGGAA........................................................................................................................................................................................................................................................................ 17 1 3 0.33 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................AGGCTGGGAAGGCTCGGC.................................. 18 2 3 0.33 1 1 0 0 0 0 0 0 0 0
........TGATTGCGCGCGTGG.......................................................................................................................................................................................................................................................................... 15 0 20 0.25 5 0 0 2 0 0 1 1 0 1
...................................................................................................................................................................................................................................................AGACGGCTGGGCGGT............................... 15 1 5 0.20 1 0 0 1 0 0 0 0 0 0
....................................................................................................CGAGTCGCGTACAAGCAGCA......................................................................................................................................................................... 20 3 5 0.20 1 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................GTCGTACGGTGAACGCCTC................................................................................................ 19 3 7 0.14 1 0 1 0 0 0 0 0 0 0
...................................................TCAGAACTCGTACGG............................................................................................................................................................................................................................... 15 1 8 0.13 1 0 0 0 0 0 0 0 0 1
......................GAGAAGATTGAGGGCGCAAC....................................................................................................................................................................................................................................................... 20 3 10 0.10 1 0 0 0 1 0 0 0 0 0
....................................................................................................................AGCAGAAGCATTCGCG............................................................................................................................................................. 16 1 10 0.10 1 0 1 0 0 0 0 0 0 0
..................................................GTGAGAGCCCGTACGG............................................................................................................................................................................................................................... 16 2 12 0.08 1 0 0 0 0 0 1 0 0 0
........................GAATATTGGCTGCGCCA........................................................................................................................................................................................................................................................ 17 2 18 0.06 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................GGCGGTAGATGAACGGC.................... 17 2 19 0.05 1 0 0 0 0 0 0 1 0 0
...............................................................................................................................TCGCGTAGGACGGTT................................................................................................................................................... 15 2 20 0.05 1 0 0 0 0 0 0 0 0 1
.......................................................................................................................................................................................................................................GGATGAAGGCTGGGAC.......................................... 16 2 20 0.05 1 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................................GCGGAGAAGGCTGGGCGGT............................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

AGACCCGCACTAACGCGCGCACCTCTTCTAACCGCCGCGGTGCAGCGCGCCACTCTTGAGCATGCCGTAGCTCTAAAAGACGTTCCTGTACGCTTTGGACGCTAAGCGGGTGTTCGTCGTCTTAGTAAGCGCCTCCTGCCACAAACTCTTTGACGTCCGGTTGCGGAAAGGCGAGAGCATGTCACCTGCGGAGAAACGTAAGCGTGTGCGGCGCCGGTTGAGACACTTGCCCTTACCTCCGACCCTGCCGACCCGCCATATACTTGGCGACCGCCTCGACGCGGCGAAC
*********************************************************************************************************.((...........((((((.((..(((((........)))))...)))))..)))..........))******************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
............................................................................................................GGTGTTCGAGGTCTTAGTAA................................................................................................................................................................. 20 2 1 1.00 1 1 0 0
............................................GCGCGCCAATCTTGA...................................................................................................................................................................................................................................... 15 1 3 0.33 1 0 1 0
..........................................................................................................................................................................................................................................ACCACCGACCCTGCC........................................ 15 1 9 0.11 1 1 0 0
...............................................................................................................................................................GTTTCGGAAAGGCGA................................................................................................................... 15 1 11 0.09 1 0 1 0
...................................................................................................................................................................................................TCTTAAGCTTGTGCGGCGC........................................................................... 19 3 18 0.06 1 1 0 0
......................................GGTGCAGCGCGCTAGGCT......................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 1
................................................................................................................................................................................................................CGTCGCCGGTATAGACACT.............................................................. 19 3 20 0.05 1 0 1 0
...........................................................................................................................................................................CCATAGCGTGTCACCTGC.................................................................................................... 18 3 20 0.05 1 0 0 1
....................................TCGCTGCAGCGCGCCA............................................................................................................................................................................................................................................. 16 2 20 0.05 1 0 1 0
..............................ACCGCGGCGCTGCAGCG.................................................................................................................................................................................................................................................. 17 2 20 0.05 1 0 1 0
...........................................................................................................GGGTGTTCCTCGTCT....................................................................................................................................................................... 15 1 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:5831727-5832015 - dsi_11826 TCTGGGCGTGATTGCGCGCGTGGAGAAGATTGGCGGCGCCACGTCGCGCGGTGAGAACTCGTACGGCATCGAGATTTTCTGCAAGGACATGCGAAACCTGCGATTCGCCCACAAGCAGCAGAATCATTCGCGGAGGACGGTGTTTGAGAAACTGCAGGCCAACGCCTTTCCGCTCTCGTACAGTGGACGCCTCTTTGCATTCGCACACGCCGCGG---------------------CCAA-----CTCTGTGAAC---GGGA----------ATGGAGGCTGGGACG-GCTGGGCGGTATATGAACCGCTGGCGGAGCTGCGCCGCTTG
droSec2 scaffold_5:4107077-4107366 - TCTGGGCGTGATCGCGCGCGTGGAGAAGATTGGCGGCGCCACGTCGCGCGGTGAGAACTCGTACGGCATCGAGATTTTCTGCAAGGACATGCGAAACCTGCGATTCGCCCACAAGCAGCAGAATCATTCGCGGAGGACGGTGTTTGAGAAACTGCAGGCCAACGCCTTTCCGCTCTCGTACAGTGGACGCCTCTTTGCATTCGCACACGCCGCGG---------------------CCAA-----CTCTGTGAAC---GGGA----------ACGGCGGCTGGGACGGGCTGGGCGGTATATGAACCGCTGGCGGAGCTGCGCCGCTTG
dm3 chr2L:6036218-6036506 - TCTGGGCGTGATCGCGCGTGTGGAGAAGATTGGAGGTGCCACGTCTCGCGGTGAGAACTCGTACGGCATCGAGATTTTCTGCAAGGACATGCGAAACCTGCGATTCGCCCACAAGCAGCAGAATCATTCGCGGAGGACGGTGTTTGAGAAACTGCAGGCCAACGCCTTTCCGCTCTCGTACAGTGGGCGCCTCTTTGCATTCGCCCACGCCGCGG---------------------CCAA-----CTCTGTGAAC---GGTA----------ACGGAGGCTGGGACG-GCTGGGCGGTATATGAACCGCTGGCGGAGCTGCGCCGCTTG
droEre2 scaffold_4929:11084877-11085165 + TCTGGGCGTGATTGCGCGCGTAGAGAAGATTGGCGGTGCCACGTCGCGCGGCGAGAACTCGTACGGAATCGAGATATTTTGCAAGGACATGCGAAACCTGCGCTTCGCCCACAAGCAGCAGAATCATTCGCGCAGGACGGTGTTTGAGAAACTACAGGCCAATGCCTTCCCACTATCGTACAGTGGGCGGCTCTTCGCATTCGCACACGCCGCGG---------------------CCAA-----CTCGGTGAAC---GGGA----------ACGGCGGCTGGGACG-GATGGGCGGTATATGAACCGCTGGCGGAGCTGCGGCGCTTG
droYak3 2L:13156010-13156298 + TCTGGGCGTGATCGCGCGCGTGGAGAAGATTGGCGGTGCCACGTCGCGCGGCGAGAATTCGTACGGAATCGAGATATTCTGCAAGGACATGCGAAACCTGCGCTTCGCCCACAAGCAGCAGAATCATTCGCGCAGGACGGTGTTTGAGAAACTGCAGGCCAATGCCTTCCCGCTCTCGTACAGTGGACGCCTCTTTGCATTCGCACACGCCGCGG---------------------CCAA-----CTCGGTGAAC---GGAA----------ACGGCGGCTGGGACG-GATGGGCGGTATATGAGCCGCTGGCGGAGCTGCGGCGCTTG
droEug1 scf7180000409676:538391-538679 + CTTAGGCGTAATTGCTCGTGTGGAAAAGATCGGCGGTGCCACGTCACGGGGCGAGAACTCGTATGGAATTGAGATCTTCTGCAAGGACATGCGAAATTTACGTTTCGCCCACAAGCAGCAAAATCACTCGCGAAGAACGGTATTCGAGAAACTGCAGGCTAATGCATTTCCACTCTCGTATAGTGGGCGCCTCTTTGCCTTCGCCCATGCAGCTG---------------------CGAA-----CTCGATGAAT---GGAA----------ACGGAGGATGGGACG-GGTGGGCGGTTTATGAACCGCTTGCGGAGCTCCGGCGCCTA
droBia1 scf7180000302473:17634-17922 + CTTGGGCGTGATCGCTCGCGTGGAGAAGATTGGTGGTGCTACATCGCGGGGCGAAAACTCTTATGGCATTGAGATCTTTTGTAAAGACATGCGTAACCTGCGCTTTGCCCACAAGCAGCAGAATCACTCTCGCAGGTCAGTCTTTGAGAAATTGCAAGCAAATGCTTTTCCGCTTTCGTACAGTGGTCGCCTCTTCGCCTTCGCCCATGCAGCGG---------------------GAAA-----CACGCTGAAT---GGAC----------ATGGTGGTTGCGATG-GATGGGCGGTGTATGAACCTCTGGCGGAGCTCCGGCGCTTG
droTak1 scf7180000415958:14218-14506 + ACTTGGCGTTATTGCTCGCGTGGAGAAGATAGGCGGTGCCACGTCGCGGGGCGAAAACTCCTATGGCATCGAAATCTTCTGCAAGGACATGCGTAACCTGCGCTTCGCCCACAAGCAGCAGAATCACTCGCGCAGGACGGTGTTCGAGAAACTGCAGGCCAACGCTTTTCCACTCTCGTACAGTGGACGCCTCTTTGCCTTCGCCCATGCGGCGG---------------------CAAA-----CTCGGTTAAC---GGAA----------ACGGCGGATGGGACG-GATGGATGGTGTATGAACCGCTGGCAGAGCTACGGCGATTG
droEle1 scf7180000490399:89895-90183 - CCTGGGCGTGATAGCGCGTGTCGAGAAGATCGGGGGTGCCACGTCGCGGGGCGAGAATTCGTACGGCATCGAGATCTTCTGCAAGGACATGCGGAACCTGCGATTCGCCCACAAGCAGCAGAACCACTCGCGCAGGACGGTGTTCGAGAAGCTGCAGGCAAATGCCTTTCCGCTCTCGTACAGTGGACGCCTCTTCGCCTTCGCCCATGCGGCGG---------------------CCAA-----CTCGGTGAAT---GGAA----------GCAGCGGCTGGGACG-GATGGGCTGTGTATGAGCCGCTGGCGGAACTGCGGCGCCTG
droRho1 scf7180000779105:5989-6277 - GCTGGGCGTAATAGCGCGCGTGGAGAAGATCGGGGGGGCCACTTCGCGGGGCGAAAACTCGTACGGCATCGAGATCTTCTGCAAGGACATGCGCAACCTGCGTTTCGCCCACAAGCAGCAGAATCACTCCCGCAGGACGGTGTTCGAGAAACTGCAGACCAATGCCTTTCCGCTCTCGTACAGTGGTCGTCTCTTTGCCTTTGCCCATGCGGCTG---------------------CCAA-----CTCAGTGAAT---GGAA----------GCGGAGGCTGGAATG-GCTGGGCGGTGTTTGAACCGCTGGCGGAGCTTCGGCGCCTG
droFic1 scf7180000452562:26065-26353 + CCTGGGTGTGATAGCGCGTTTAGAAAAGATTGGTGGTGCCACGTCACGAGGCGAGAACTCATACGGCATAGAAATATTCTGCAAGGACATGCGCAACCTGCGCTTCGCCCACAAGCAGCAAAATCACTCGCGCAGGACAGTGTTTGAAAAGCTGCAGACGAATGCTTTTCCACTCTCGTACAGTGGACGCCTATTTGCTTTCGCCTATTCAGCGG---------------------CCAA-----CTCAGTAAAC---GGAA----------GCGTTGGATGGGATG-GATGGTCAGTGTATGAACCGCTGGCGGAGTTGCGGCGCCTT
droKik1 scf7180000302468:98847-99141 - GCTGGGCGTAATAGCCCGAGTCGAGAAGATCGGTGGTGCCACGTCGCGAGGAGAGAATTCGTACGGCATCGAGATCTTCTGCAAGGACATGCGCAACCTGCGGTTTGCCCACAAACAGCAGAATCACTCTCGCCGGACGGTGTTTGAGAAGTTGCAGACAAACGCGTTTCCTCTGTCCTACAGCGGGCGGCTCTTTGCCTTCGCCCATGCGGCGGCGG------------------CCAG-----TGCCGTGAATGGCGGCA----------GCAGTGGCTGGGACG-GATGGGCCGTCTACGAGCCGCTGGCAGAACTACGACGCCTT
droAna3 scaffold_12916:11450562-11450850 - TCTGGGTGTGATAGCGAGGGTGGAGAAAATCGGAGGCGCCACGTCCAGAGGCGAGAACTCATATGGCATTGAAATTTTCTGCAAGGATATGCGAAACCTGCGCTTCGCCCACAAACAGCAGAATCACTCGCGCAGGACGGTGTTCGAGAAGCTGCAGGCCAATGCTTTCCCGCTGTCCTACAGCGGTCGACTCTTCGCCTTTGCGCACGCAGCGG---------------------CCAA-----TGCCGTAAAT---GGAA----------ACGGTGGCTGGGACG-GCTGGGCAGTCTACGAGCCGCTGGCTGAGCTGCGGCGCCTG
droBip1 scf7180000396572:1121275-1121563 - TCTGGGTGTGATAGCAAGGGTGGAGAAAATCGGAGGCGCCACGTCAAGGGGCGAGAACTCTTATGGCATTGAAATTTTCTGCAAGGATATGCGAAACCTGCGCTTCGCCCACAAGCAGCAGAACCACTCGCGAAGGACTGTGTTTGAGAAGCTGCAGGCTAATGCTTTTCCACTGTCCTACAGCGGCCGACTCTTCGCTTTCGCGCACGCAGCGG---------------------CCAA-----TGCTGTTAAT---GGAA----------ACGGTGGCTGGGACG-GCTGGGCAGTGTACGAGCCGTTGGCTGAGCTGCGGCGCCTG
dp5 4_group1:233931-234219 + GTTGGGCGTGATTGCGCGAGTGGAGAAGATTGGTGGTGCCACGTCGCGCGGCGAGAACTCGTACGGCATTGAGATATTCTGCAAAGATATGAGGAATCTGCGTTTTGCGCACAAGCAGCAGAATCATTCACGCAGAACGGTGTTTGAGAAGTTGCAGACGAATGCATTTCCGCTCTCCTACAGCGGCCGTCTCTTCGCCTTTGCCCATGCCGCGG---------------------CCAA-----CGCTGTGAAC---GGCA----------GCGGAGGCTGGGACG-GCTGGGCAGTGTACGAACCCCTTGCGGAGCTGCGTCGCCTG
droPer2 scaffold_1:230178-230466 + GTTGGGCGTGATTGCGCGAGTGGAGAAGATTGGTGGTGCCACGTCGCGCGGCGAGAACTCGTACGGCATTGAGATATTCTGCAAAGATATGAGGAATCTGCGTTTTGCGCACAAGCAGCAGAATCATTCACGCAGAACGGTGTTTGAGAAGCTGCAGACGAATGCATTTCCGCTCTCCTACAGCGGCCGTCTCTTCGCCTTTGCCCATGCCGCGG---------------------CCAA-----CGCTGTGAAC---GGCA----------GCGGAGGCTGGGACG-GCTGGGCAGTGTACGAACCCCTTGCGGAGCTGCGTCGCCTG
droWil2 scf2_1100000004521:7897673-7897976 + ACTGGGAGTCATAGCCAGGGTAGAGAAGATCGGAGGAGCTACATCGCGAGGCGAAAACTCTTACGGCATCGAGATTTTCTGCAAGGACATGCGAAATTTACGCTTTGCCCACAAACAACAGAATCACTCCCGTCGCACAGTCTTCGAGAAGTTGCAAGCGAATGCTTTTCCTTTGTCCTACAGTGGGCGATTGTTTGCATTTGCTCATGCGGCGG---------------------CTAGGGCCACTGGGGCAGC---TGGAGCCACGGCCGCCGGCGGCTGGGATG-GATGGGCAGTATATGAACCGCTAGCTGAATTGCGTCGCCTT
droVir3 scaffold_12963:3346607-3346910 - GCTGGGTGTGATTGCGCGTGTGGAGAAAATTGGTGGCGCCACGTCACGCGGCGAGAATAGCTACGGCATTGAGATATTCTGCAAGGATATGCGCAACCTGCGCTTCGCCCACAAGCAACAGAATCACTCGCGTCGCACCGTCTTCGAGAAGCTGCAGGCGAACGCATTTCCGCTCTCCTACAGCGGCAAACTGTTCGCCTTCGCGCATGCCGCGGCGG---CACAACCGCCCG---CCGC-----CATTGCGGCC---GTGA----------GCGCCGGCTGGGATG-GCTGGGCCGTGTATGAGCCGCTGGCGGAGCTGCGACGTCTG
droMoj3 scaffold_6500:13719081-13719387 - GTTGGGCGTGATTGCGCGTGTGGAAAAAATCGGTGGTGCCACGTCACGAGGCGAGAATAGCTATGGCATTGAGATCTTCTGCAAAGATATGCGCAATTTACGCTTCGCACACAAGCAGCAGAATCATTCGCGTCGCACAGTGTTCGAGAAGCTGCAGGCCAATGCATTTCCGCTCTCCTACAGCGGCAAACTCTTTGCGTTTGCTCATGCCGCTGCAGCTGCTCAGCCGTCGACGGCAAA-----TGC---AGCT---GTGA----------GCGCCGGCTGGGATG-GCTGGGCGGTGTACGAGCCGTTGGCCGAGCTGCGTCGCCTG
droGri2 scaffold_15252:2918874-2919147 - GCTGGGTGTGATAGCTCGCGTAGAGAAAATCGGTGGCGCCACGTCGCGCGGCGAGAACAGTTATGGCATTGAGATTTTCTGCAAGGACATGCGAAATCTACGCTTTGCGCACAAACAGCAAAATCACTCGCGTCGCACCGTATTCGAAAAATTGCAGTGGAATGCATTTCCGCTGTCCTATACGGGAAAACTGTTCGCCTTCACCCATGGGGCAG---------------------TGAG---------------------------------CGCCAGCTGGGATG-GCTGGTCAGTGTATGAGCCGCTGGCGGAGCTGCGTCGGCTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCTGGGCGTGATTGCGCGCGTGGAGAAGATTGGCGGCGCCACGTCGCGCGGTGAGAACTCGTACGGCATCGAGATTTTCTGCAAGGACATGCGAAACCTGCGATTCGCCCACAAGCAGCAGAATCATTCGCGGAGGACGGTGTTTGAGAAACTGCAGGCCAACGCCTTTCCGCTCTCGTACAGTGGACGCCTCTTTGCATTCGCACACGCCGCGG---------------------CCAA-----CTCTGTGAAC---GGGA----------ATGGAGGCTGGGACG-GCTGGGCGGTATATGAACCGCTGGCGGAGCTGCGCCGCTTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................GCCAACGCCTTTCCGCTCTCGTACAGT.................................................................................................................................................2711.00100010000000000000
..................................................................................................................................................................................................................................................................................................TGGGCGGTATATGAACCGCTGGCGGAGC...........2811.00100000000001000000
....................................................................................................................AGCAGAATCATTCGCGGAGGACGGT............................................................................................................................................................................................2511.00100000000100000000
..................................................................................................................................................................................................................CGCGG---------------------CCAA-----CTCTGTGAAC---GGGA----------AT.......................................................2511.00101000000000000000
..................................................................................................................................................................................................................CGCGG---------------------CCAA-----CTCTGTGAAC---GG.....................................................................2111.00100000001000000000
...........................................TCGCGCGGTGAGAACTCG............................................................................................................................................................................................................................................................................1811.00100000010000000000
...................................................................ATCGAGATTTTCTGCAAGGAC.................................................................................................................................................................................................................................................2111.00110000000000000000
..............................................................................CTGCAAGGACATGCGAAACC.......................................................................................................................................................................................................................................2011.00110000000000000000
...................................................................................................................................................GAAACTGCAGGCCAACGCCTTTCC..............................................................................................................................................................2411.00100010000000000000
................................................................................................................................................TGAGAAACTGCAGGCCAACGCCTTTC...............................................................................................................................................................2611.00100010000000000000
............TGCGCGCGTGGAGAAGATTGG........................................................................................................................................................................................................................................................................................................2111.00100000000000001000
................................................................................GCAAGGACATGCGAAACCT......................................................................................................................................................................................................................................1911.00101000000000000000
........................................................................................................................................................................................................................................................................................TGGGACG-GCTGGGCGGTATATGAAC.......................2511.00100000010000000000
.........GATTGCGCGCGTGGAG................................................................................................................................................................................................................................................................................................................1620.50100000000001000000
........TGATTGCGCGCGTGGAA................................................................................................................................................................................................................................................................................................................1730.33100000000001000000
........TGATTGCGCGCGTGG..................................................................................................................................................................................................................................................................................................................15200.25500000021110000000
droSec2
TCTGGGCGTGATCGCGCGCGTGGAGAAGATTGGCGGCGCCACGTCGCGCGGTGAGAACTCGTACGGCATCGAGATTTTCTGCAAGGACATGCGAAACCTGCGATTCGCCCACAAGCAGCAGAATCATTCGCGGAGGACGGTGTTTGAGAAACTGCAGGCCAACGCCTTTCCGCTCTCGTACAGTGGACGCCTCTTTGCATTCGCACACGCCGCGG---------------------CCAA-----CTCTGTGAAC---GGGA----------ACGGCGGCTGGGACGGGCTGGGCGGTATATGAACCGCTGGCGGAGCTGCGCCGCTTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................TGCGAAACCTGCGATTCGCCCACAA.......................................................................................................................................................................................................................2511.0011000
............................ATTGGCGGCGCCACGTCGCGCG.......................................................................................................................................................................................................................................................................................2211.0010010
..............................................................................................................................................................................CTCGTACAGTGGACGCCT.........................................................................................................................................1811.0010010
...................................................................................................................................................................................................................GCGG---------------------CCAA-----CTCTGTGAAC---GGGA----------ACGGC....................................................2711.0010100
..........................................................................................................................................................................................................................................................................................................ATATGAACCGCTGGCGGAGCTGCGCC.....2611.0010010
..............................................................................................................................................................................................................................................AA-----CTCTGTGAAC---GGGA----------ACGGC....................................................2111.0010010
......................................................................GAGATTTTCTGCAAGGACATGCGA...........................................................................................................................................................................................................................................2411.0010010
.............................................................................................................................ATTCGCGGAGGACGGTGTT.........................................................................................................................................................................................1911.0010010
.....................................................................................................................................................................................................................................................CTCTGTGAAC---GGGA----------ACGGC....................................................1911.0010010
.....................................................................................................................GCAGAATCATTCGCGGAGGAC...............................................................................................................................................................................................2111.0010100
....................................................................................................................AGCAGAATCATTCGCGGAGGACGG.............................................................................................................................................................................................2411.0010100
......................................................................................................................................GGACGGTGTTTGAGAAACTGCA.............................................................................................................................................................................2211.0010010
dm3
TCTGGGCGTGATCGCGCGTGTGGAGAAGATTGGAGGTGCCACGTCTCGCGGTGAGAACTCGTACGGCATCGAGATTTTCTGCAAGGACATGCGAAACCTGCGATTCGCCCACAAGCAGCAGAATCATTCGCGGAGGACGGTGTTTGAGAAACTGCAGGCCAACGCCTTTCCGCTCTCGTACAGTGGGCGCCTCTTTGCATTCGCCCACGCCGCGG---------------------CCAA-----CTCTGTGAAC---GGTA----------ACGGAGGCTGGGACG-GCTGGGCGGTATATGAACCGCTGGCGGAGCTGCGCCGCTTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................CGTACAGTGGGCGCCTCTT......................................................................................................................................19110.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................ATATGAACCGCTGGCGGAGCTGCGC......2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................................................................................................................................GGACGGTGTTTGAGAAACTGCAGGC..........................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AACCGCTGGCGGAGCTGCGCCG....2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
...................................................................................................................................................................................................................................................................GTA----------ACGGAGGCTGGGACG-GCTGGGC..................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
..................TGTGGAGAAGATTGGAGGTGCCACG..............................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................ACGGCATCGAGATTTTCTGCAAGGAC.................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................GAAACTGCAGGCCAACGCCTTTCCG.............................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TATATGAACCGCTGGCGGAGCTGC........2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GAAGATTGGAGGTGCCAC...............................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................ATATGAACCGCTGGCGGA.............1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TGTGGAGAAGATTGGAGGTG...................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GTGGAGAAGATTGGAGGTGCCACGTCTCG.........................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TGTTTGAGAAACTGCAGGCCAACG.....................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TCGCGCGTGTGGAGAAGATTGGAGG.....................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................GCCTTTCCGCTCTCGTACA...................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GCGTGTGGAGAAGATTGGAG......................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................GTATATGAACCGCTGGCGGAGCTGCGCC.....2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................AAGGACATGCGAAACCTGC....................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................CGCGG---------------------CCAA-----CTCTGTGAAC---GGTA----------AC.......................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GTGATCGCGCGTGTGGAGAA..............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............................................................................................................................................................................................TCTTTGCATTCGCCCACGCCGCGG---------------------CC...........................................................................................2611.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................CGCCCACAAGCAGCAGAAT.............................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TGTGGAGAAGATTGGAGGTGCCA................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............GCGTGTGGAGAAGATTGGAGGTGCC.................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CGCGTGTGGAGAAGATTGGA.......................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................AGAATCATTCGCGGAGGACGGTGTTT........................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................ATATGAACCGCTGGCGGAGCCT.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TATGAACCGCTGGCGGAGCTGCGC......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................GTACGGCATCGAGATTTTC..........................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................ATGAACCGCTGGCGGAGCTGCGCCGCTT.2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................GACGGTGTTTGAGAAACTGCA.............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................CTGGGACG-GCTGGGCGGT...............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................GAGAAGATTGGAGGTGCCACGTCTCGC........................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................A-----CTCTGTGAAC---GGTA----------ACGG.....................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GATTGGAGGTGCCACGTCT...........................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TATGAACCGCTGGCGGAGCTG.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................CGCGGTGAGAACTCGTACGGC......................................................................................................................................................................................................................................................................2111.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TACAGTGGGCGCCTCTTTGCATTCG..............................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CGCGTGTGGAGAAGATTGGAGG.....................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................GGAGGACGGTGTTTGAGAAACTGC..............................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................AGAATCATTCGCGGAGGACGGTGT..........................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................AGATTGGAGGTGCCACGTCTCGCGGTGA...................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GGGCGTGATCGCGCGTGTGG..................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TCGCGCGTGTGGAGAAGATTGG........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TGCAAGGACATGCGAAACCTG.....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................CGGTGTTTGAGAAACTGCAGG...........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................GCAGAATCATTCGCGGAGGACGGTG...........................................................................................................................................................................................2511.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................GAATCATTCGCGGAGGACGGTGTT.........................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................ACGGTGTTTGAGAAACTGCAGGCCAACG.....................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GAGAACTCGTACGGCATCGAGATTT............................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................TCGCGGAGGACGGTGTTTGAGAAA..................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................GTGAAC---GGTA----------ACGGAGGCTG...............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
................................................................................GCAAGGACATGCGAAACCTG.....................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................ATGAACCGCTGGCGGAGCTGC........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................CGCTCTCGTACAGTGGGCGCC..........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................AATCATTCGCGGAGGACG..............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................................................................................................................................................CTGGGACG-GCTGGGCGGTA..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................................................TTTTCTGCAAGGACATGCGAAACC.......................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CGGTGTTTGAGAAACTGCAGGCCAA.......................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................A----------ACGGAGGCTGGGACG-GCT......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................GGCTGGGACG-GCTGGGCGGT...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...........TCGCGCGTGTGGAGAAGATTGGAGGT....................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................................................................................................................................................................................................................GGTA----------ACGGAGGCTGGGACG-GCTGGGGCC................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................ACGTCTCGCGGTGAGAACTCGT...........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TCGCGGTGAGAACTCGTACGGCA.....................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCTGGGCGTGATCGCGCGTGTG...................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................TCTGCAAGGACATGCGAAACCTGCGATTC...............................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................GGAGGACGGTGTTTGAGAAACTG...............................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GAACCGCTGGCGGAGCTGCGC......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................C---GGTA----------ACGGAGGCTGGGACG-G........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................................................................CAA-----CTCTGTGAAC---GGTA----------ACGGA....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TCTCGCGGTGAGAACTCGTACGGCATC...................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................GAAC---GGTA----------ACGGAGGCTGG..............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TCATTCGCGGAGGACGGTGTTTGAGAA...................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................GGCTGGGACG-GCTGGGCGG................................1911.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................A----------ACGGAGGCTGGGACG-GCTGGGCGGT...............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................CGTCTCGCGGTGAGAACTCGTAA.........................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TTGAGAAACTGCAGGCCAACGCCTT.................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GTGATCGCGCGTGTGGAG................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GATCGCGCGTGTGGAGAA..............................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............CGCGCGTGTGGAGAAGGG...........................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TCTGGGCGTGATTGCGCGCGTAGAGAAGATTGGCGGTGCCACGTCGCGCGGCGAGAACTCGTACGGAATCGAGATATTTTGCAAGGACATGCGAAACCTGCGCTTCGCCCACAAGCAGCAGAATCATTCGCGCAGGACGGTGTTTGAGAAACTACAGGCCAATGCCTTCCCACTATCGTACAGTGGGCGGCTCTTCGCATTCGCACACGCCGCGG---------------------CCAA-----CTCGGTGAAC---GGGA----------ACGGCGGCTGGGACG-GATGGGCGGTATATGAACCGCTGGCGGAGCTGCGGCGCTTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................CGCGCGGCGAGAACTCGTACGGAATCGA.................................................................................................................................................................................................................................................................2818.0080000008
............................................................GTACGGAATCGAGATATTTTGCAAGGAC.................................................................................................................................................................................................................................................2811.0010100000
.............................................................................................AAACCTGCGCTTCGCCCACA........................................................................................................................................................................................................................2011.0010000010
...........................................................CGTACGGAATCGAGATATTTTGCAAGGA..................................................................................................................................................................................................................................................2811.0010000100
..........................................................................................................................ATCATTCGCGCAGGACGGTGTT.........................................................................................................................................................................................2211.0010000100
.....................................................................CGAGATATTTTGCAAGGACATGC.............................................................................................................................................................................................................................................2311.0010000100
...............................................................................................................................................................................................TCTTCGCATTCGCACACGCCGCGG---------------------C............................................................................................2511.0010000010
................................................................................................................................................................................................................................................................................ACGGCGGCTGGGACG-GATGGGC..................................2211.0011000000
..................................................................................................................................................................................................................CGCGG---------------------CCAA-----CTCGGTGAAC---GGGA----------A........................................................2411.0011000000
.....................................................................................................................................................................................................................GG---------------------CCAA-----CTCGGTGAAC---GGGA----------ACGGC....................................................2511.0010000010
droYak3
TCTGGGCGTGATCGCGCGCGTGGAGAAGATTGGCGGTGCCACGTCGCGCGGCGAGAATTCGTACGGAATCGAGATATTCTGCAAGGACATGCGAAACCTGCGCTTCGCCCACAAGCAGCAGAATCATTCGCGCAGGACGGTGTTTGAGAAACTGCAGGCCAATGCCTTCCCGCTCTCGTACAGTGGACGCCTCTTTGCATTCGCACACGCCGCGG---------------------CCAA-----CTCGGTGAAC---GGAA----------ACGGCGGCTGGGACG-GATGGGCGGTATATGAGCCGCTGGCGGAGCTGCGGCGCTTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......GTGATCGCGCGCGTGGAGAAGATTGGCG......................................................................................................................................................................................................................................................................................................2812.00200000000002
..........................................................................................................................................................................................................................................................................................................ATATGAGCCGCTGGCGGAGCT..........2111.00100100000000
.............................................................................................................................ATTCGCGCAGGACGGTGTTTGA......................................................................................................................................................................................2211.00100000010000
..............................................................................................................................TTCGCGCAGGACGGTGTTT........................................................................................................................................................................................1911.00100000010000
..........................................................................................................................................................................................................................................................................................................ATATGAGCCGCTGGCGGAGC...........2011.00101000000000
.......GTGATCGCGCGCGTGGAGAAGATTGGC.......................................................................................................................................................................................................................................................................................................2711.00100000010000
.............................................................................TCTGCAAGGACATGCGAAACC.......................................................................................................................................................................................................................................2111.00100100000000
.....................................................................................................................................................................................................................................................................A----------ACGGCGGCTGGGACG-GATGG....................................2111.00100000010000
..................................................................AATCGAGATATTCTGCAAG....................................................................................................................................................................................................................................................1911.00101000000000
............................................CGCGCGGCGAGAATTCGTACG........................................................................................................................................................................................................................................................................2111.00100000010000
........................................................................................................................GAATCATTCGCGCAGGAC...............................................................................................................................................................................................1811.00100100000000
droEug1
CTTAGGCGTAATTGCTCGTGTGGAAAAGATCGGCGGTGCCACGTCACGGGGCGAGAACTCGTATGGAATTGAGATCTTCTGCAAGGACATGCGAAATTTACGTTTCGCCCACAAGCAGCAAAATCACTCGCGAAGAACGGTATTCGAGAAACTGCAGGCTAATGCATTTCCACTCTCGTATAGTGGGCGCCTCTTTGCCTTCGCCCATGCAGCTG---------------------CGAA-----CTCGATGAAT---GGAA----------ACGGAGGATGGGACG-GGTGGGCGGTTTATGAACCGCTTGCGGAGCTCCGGCGCCTASizeHit CountTotal NormTotal
No Reads
droBia1
CTTGGGCGTGATCGCTCGCGTGGAGAAGATTGGTGGTGCTACATCGCGGGGCGAAAACTCTTATGGCATTGAGATCTTTTGTAAAGACATGCGTAACCTGCGCTTTGCCCACAAGCAGCAGAATCACTCTCGCAGGTCAGTCTTTGAGAAATTGCAAGCAAATGCTTTTCCGCTTTCGTACAGTGGTCGCCTCTTCGCCTTCGCCCATGCAGCGG---------------------GAAA-----CACGCTGAAT---GGAC----------ATGGTGGTTGCGATG-GATGGGCGGTGTATGAACCTCTGGCGGAGCTCCGGCGCTTGSizeHit CountTotal NormTotal
No Reads
droTak1
ACTTGGCGTTATTGCTCGCGTGGAGAAGATAGGCGGTGCCACGTCGCGGGGCGAAAACTCCTATGGCATCGAAATCTTCTGCAAGGACATGCGTAACCTGCGCTTCGCCCACAAGCAGCAGAATCACTCGCGCAGGACGGTGTTCGAGAAACTGCAGGCCAACGCTTTTCCACTCTCGTACAGTGGACGCCTCTTTGCCTTCGCCCATGCGGCGG---------------------CAAA-----CTCGGTTAAC---GGAA----------ACGGCGGATGGGACG-GATGGATGGTGTATGAACCGCTGGCAGAGCTACGGCGATTGSizeHit CountTotal NormTotal
No Reads
droEle1
CCTGGGCGTGATAGCGCGTGTCGAGAAGATCGGGGGTGCCACGTCGCGGGGCGAGAATTCGTACGGCATCGAGATCTTCTGCAAGGACATGCGGAACCTGCGATTCGCCCACAAGCAGCAGAACCACTCGCGCAGGACGGTGTTCGAGAAGCTGCAGGCAAATGCCTTTCCGCTCTCGTACAGTGGACGCCTCTTCGCCTTCGCCCATGCGGCGG---------------------CCAA-----CTCGGTGAAT---GGAA----------GCAGCGGCTGGGACG-GATGGGCTGTGTATGAGCCGCTGGCGGAACTGCGGCGCCTGSizeHit CountTotal NormTotal
No Reads
droRho1
GCTGGGCGTAATAGCGCGCGTGGAGAAGATCGGGGGGGCCACTTCGCGGGGCGAAAACTCGTACGGCATCGAGATCTTCTGCAAGGACATGCGCAACCTGCGTTTCGCCCACAAGCAGCAGAATCACTCCCGCAGGACGGTGTTCGAGAAACTGCAGACCAATGCCTTTCCGCTCTCGTACAGTGGTCGTCTCTTTGCCTTTGCCCATGCGGCTG---------------------CCAA-----CTCAGTGAAT---GGAA----------GCGGAGGCTGGAATG-GCTGGGCGGTGTTTGAACCGCTGGCGGAGCTTCGGCGCCTGSizeHit CountTotal NormTotal
No Reads
droFic1
CCTGGGTGTGATAGCGCGTTTAGAAAAGATTGGTGGTGCCACGTCACGAGGCGAGAACTCATACGGCATAGAAATATTCTGCAAGGACATGCGCAACCTGCGCTTCGCCCACAAGCAGCAAAATCACTCGCGCAGGACAGTGTTTGAAAAGCTGCAGACGAATGCTTTTCCACTCTCGTACAGTGGACGCCTATTTGCTTTCGCCTATTCAGCGG---------------------CCAA-----CTCAGTAAAC---GGAA----------GCGTTGGATGGGATG-GATGGTCAGTGTATGAACCGCTGGCGGAGTTGCGGCGCCTTSizeHit CountTotal NormTotal
No Reads
droKik1
GCTGGGCGTAATAGCCCGAGTCGAGAAGATCGGTGGTGCCACGTCGCGAGGAGAGAATTCGTACGGCATCGAGATCTTCTGCAAGGACATGCGCAACCTGCGGTTTGCCCACAAACAGCAGAATCACTCTCGCCGGACGGTGTTTGAGAAGTTGCAGACAAACGCGTTTCCTCTGTCCTACAGCGGGCGGCTCTTTGCCTTCGCCCATGCGGCGGCGG------------------CCAG-----TGCCGTGAATGGCGGCA----------GCAGTGGCTGGGACG-GATGGGCCGTCTACGAGCCGCTGGCAGAACTACGACGCCTTSizeHit CountTotal NormTotal
No Reads
droAna3
TCTGGGTGTGATAGCGAGGGTGGAGAAAATCGGAGGCGCCACGTCCAGAGGCGAGAACTCATATGGCATTGAAATTTTCTGCAAGGATATGCGAAACCTGCGCTTCGCCCACAAACAGCAGAATCACTCGCGCAGGACGGTGTTCGAGAAGCTGCAGGCCAATGCTTTCCCGCTGTCCTACAGCGGTCGACTCTTCGCCTTTGCGCACGCAGCGG---------------------CCAA-----TGCCGTAAAT---GGAA----------ACGGTGGCTGGGACG-GCTGGGCAGTCTACGAGCCGCTGGCTGAGCTGCGGCGCCTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................GGGTGGAGAAAATCGGAGGC....................................................................................................................................................................................................................................................................................................2011.001100000
.........GATAGCGAGGGTGGAGAAA.............................................................................................................................................................................................................................................................................................................1911.001000010
..........................................................................................................................................................................................................................................................................................................CTACGAGCCGCTGGCTGAGCTGCGGC.....2611.001010000
.........................................................................................................................................CGGTGTTCGAGAAGCTGCAGGCC.........................................................................................................................................................................2311.001100000
.....................................................................................GATATGCGAAACCTGCGCTTCGCCC...........................................................................................................................................................................................................................2511.001010000
......................................................................................................................................................................................GCGGTCGACTCTTCGCCTTTG..............................................................................................................................2111.001100000
...........................................................................................................................................................................................................................................................AAAT---GGAA----------ACGGTGGCTGGGA............................................2111.001000010
...........................................................................................................................................................................................................................................................AAAT---GGAA----------ACGGTGGCTGG..............................................1911.001001000
..........................................................................................................................................GGTGTTCGAGAAGCTGCAGGCC.........................................................................................................................................................................2211.001010000
.........................................................................................................................................................................................................................................................GTAAAT---GGAA----------ACGGTGGCTG...............................................2011.001000001
..................................................GCGAGAACTCATATGGCATTGA.................................................................................................................................................................................................................................................................2211.001010000
.............................................................................................................................................GTTCGAGAAGCTGCAGGCCA........................................................................................................................................................................2011.001100000
.CTGGGTGTGATAGCGAGGGTGGAGA...............................................................................................................................................................................................................................................................................................................2511.001000010
droBip1
TCTGGGTGTGATAGCAAGGGTGGAGAAAATCGGAGGCGCCACGTCAAGGGGCGAGAACTCTTATGGCATTGAAATTTTCTGCAAGGATATGCGAAACCTGCGCTTCGCCCACAAGCAGCAGAACCACTCGCGAAGGACTGTGTTTGAGAAGCTGCAGGCTAATGCTTTTCCACTGTCCTACAGCGGCCGACTCTTCGCTTTCGCGCACGCAGCGG---------------------CCAA-----TGCTGTTAAT---GGAA----------ACGGTGGCTGGGACG-GCTGGGCAGTGTACGAGCCGTTGGCTGAGCTGCGGCGCCTGSizeHit CountTotal NormTotal
No Reads
dp5
GTTGGGCGTGATTGCGCGAGTGGAGAAGATTGGTGGTGCCACGTCGCGCGGCGAGAACTCGTACGGCATTGAGATATTCTGCAAAGATATGAGGAATCTGCGTTTTGCGCACAAGCAGCAGAATCATTCACGCAGAACGGTGTTTGAGAAGTTGCAGACGAATGCATTTCCGCTCTCCTACAGCGGCCGTCTCTTCGCCTTTGCCCATGCCGCGG---------------------CCAA-----CGCTGTGAAC---GGCA----------GCGGAGGCTGGGACG-GCTGGGCAGTGTACGAACCCCTTGCGGAGCTGCGTCGCCTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................GGCA----------GCGGAGGCTGGGACG-.........................................1911.0010100000000
.....................................GCCACGTCGCGCGGCGAGAACTC.............................................................................................................................................................................................................................................................................2311.0010100000000
...................................................CGAGAACTCGTACGGCATTGAG................................................................................................................................................................................................................................................................2211.0010000000001
.............................................................................................................................................................................................................................................CAA-----CGCTGTGAAC---GGCA----------GC.......................................................1911.0010100000000
...................................................CGAGAACTCGTACGGCATTG..................................................................................................................................................................................................................................................................2011.0010000000001
.....................GGAGAAGATTGGTGGTGC..................................................................................................................................................................................................................................................................................................1811.0010100000000
......................................................................................................................................GAACGGTGTTTGAGAAGTTGC..............................................................................................................................................................................2111.0010100000000
..................................................................................................................GCAGCAGAATCATTCACGCAGAACGG.............................................................................................................................................................................................2611.0010100000000
...........................................................................................................................................................................................................................................................GAAC---GGCA----------GCGGAGGCTGGGAC...........................................2211.0010100000000
GTTGGGCGTGATTGCGCGAGTGGAG................................................................................................................................................................................................................................................................................................................2511.0010000001000
.............................................................................................................................ATTCACGCAGAACGGTGTTTGAGA....................................................................................................................................................................................2411.0010100000000
................CGAGTGGAGAAGATTGGT.......................................................................................................................................................................................................................................................................................................1811.0010100000000
................................................................................................................AAGCAGCAGAATCATTCACGCAG..................................................................................................................................................................................................2311.0010000010000
......................................................................................ATATGAGGAATCTGCGTTTT...............................................................................................................................................................................................................................2011.0010000010000
..........................................................................................................................ATCATTCACGCAGAACGGT............................................................................................................................................................................................1911.0010100000000
...................................................CGAGAACTCGTACGGCATT...................................................................................................................................................................................................................................................................1911.0010000000001
.......................................................................................................................................................................................................................................................................................CTGGGACG-GCTGGGC..................................1520.5010000000001
droPer2
GTTGGGCGTGATTGCGCGAGTGGAGAAGATTGGTGGTGCCACGTCGCGCGGCGAGAACTCGTACGGCATTGAGATATTCTGCAAAGATATGAGGAATCTGCGTTTTGCGCACAAGCAGCAGAATCATTCACGCAGAACGGTGTTTGAGAAGCTGCAGACGAATGCATTTCCGCTCTCCTACAGCGGCCGTCTCTTCGCCTTTGCCCATGCCGCGG---------------------CCAA-----CGCTGTGAAC---GGCA----------GCGGAGGCTGGGACG-GCTGGGCAGTGTACGAACCCCTTGCGGAGCTGCGTCGCCTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................GCGAGAACTCGTACGGCATTGAG................................................................................................................................................................................................................................................................2312.002200000
....................................................GAGAACTCGTACGGCATTGAG................................................................................................................................................................................................................................................................2111.001100000
...........................................................CGTACGGCATTGAGATATTCTGCAAAG...................................................................................................................................................................................................................................................2711.001010000
..........................................................................................................................................GGTGTTTGAGAAGCTGCAGACG.........................................................................................................................................................................2211.001000001
................................................................................................................................................................................................................................................................................................................ACCCCTTGCGGAGCTGCGTCGCCTG2511.001100000
...................................................CGAGAACTCGTACGGCATTGAGA...............................................................................................................................................................................................................................................................2311.001100000
droWil2
ACTGGGAGTCATAGCCAGGGTAGAGAAGATCGGAGGAGCTACATCGCGAGGCGAAAACTCTTACGGCATCGAGATTTTCTGCAAGGACATGCGAAATTTACGCTTTGCCCACAAACAACAGAATCACTCCCGTCGCACAGTCTTCGAGAAGTTGCAAGCGAATGCTTTTCCTTTGTCCTACAGTGGGCGATTGTTTGCATTTGCTCATGCGGCGG---------------------CTAGGGCCACTGGGGCAGC---TGGAGCCACGGCCGCCGGCGGCTGGGATG-GATGGGCAGTATATGAACCGCTAGCTGAATTGCGTCGCCTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................CTACAGTGGGCGATTGTTTGCATTTG..............................................................................................................................2611.00100010
.........CATAGCCAGGGTAGAGAAGAT...........................................................................................................................................................................................................................................................................................................2111.00100100
............AGCCAGGGTAGAGAAGATCGGAG......................................................................................................................................................................................................................................................................................................2311.00101000
......................................................................................................................................................................................................................................................TGGGGCAGC---TGGAGCCACGGC...........................................................2111.00100010
......................................CTACATCGCGAGGCGAAAACTCTTACG........................................................................................................................................................................................................................................................................2711.00101000
.....................................................................................................................................................................................................................................................................................GGCTGGGATG-GATGGGCA.................................1811.00100010
.............................................................................................................................................CTTCGAGAAGTTGCAAGCGA........................................................................................................................................................................2011.00100100
................AGGGTAGAGAAGATCGGA.......................................................................................................................................................................................................................................................................................................1811.00100100
droVir3
GCTGGGTGTGATTGCGCGTGTGGAGAAAATTGGTGGCGCCACGTCACGCGGCGAGAATAGCTACGGCATTGAGATATTCTGCAAGGATATGCGCAACCTGCGCTTCGCCCACAAGCAACAGAATCACTCGCGTCGCACCGTCTTCGAGAAGCTGCAGGCGAACGCATTTCCGCTCTCCTACAGCGGCAAACTGTTCGCCTTCGCGCATGCCGCGGCGG---CACAACCGCCCG---CCGC-----CATTGCGGCC---GTGA----------GCGCCGGCTGGGATG-GCTGGGCCGTGTATGAGCCGCTGGCGGAGCTGCGACGTCTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................ATGAGCCGCTGGCGGAGCTGCGAC.....2413.003000000000000000000000000000000000000000000000000000000000000003
................CGTGTGGAGAAAATTGGTGGCGC..................................................................................................................................................................................................................................................................................................2311.001000000000001000000000000000000000000000000000000000000000000000
....................................................................................................................................TCGCACCGTCTTCGAGAAGCTGCAGGC..........................................................................................................................................................................2711.001000000000100000000000000000000000000000000000000000000000000000
................................................................................................................AAGCAACAGAATCACTCGCGTC...................................................................................................................................................................................................2211.001000000000000010000000000000000000000000000000000000000000000000
......................................................................................................................................GCACCGTCTTCGAGAAGCTGCA.............................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
................CGTGTGGAGAAAATTGGT.......................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GTATGAGCCGCTGGCGGAGCTGCGAC.....2611.001000100000000000000000000000000000000000000000000000000000000000
........................................ACGTCACGCGGCGAGAAT...............................................................................................................................................................................................................................................................................1811.001000000010000000000000000000000000000000000000000000000000000000
..........................................................AGCTACGGCATTGAGATATT...........................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000001000000000000000000000000000
........................................................................................................................................................................................................................................................................................TGGGATG-GCTGGGCCGTGTATGAGC.......................2511.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................GCC---GTGA----------GCGCCGGCTGGGATG-GCTG.....................................2611.001001000000000000000000000000000000000000000000000000000000000000
...........................................TCACGCGGCGAGAATAGCTAC.........................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................................................CGCCGGCTGGGATG-GCTGGGC..................................2111.001000000000000000000000000000001000000000000000000000000000000000
............TGCGCGTGTGGAGAAAATTGGTGG.....................................................................................................................................................................................................................................................................................................2411.001000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................CCGGCTGGGATG-GCTGGGCC.................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CGTGTATGAGCCGCTGGCGGA.............2111.001000000000000000000000000000000000001000000000000000000000000000
................................................................................................................................................................................................................................................................................................................GCCGCTGGCGGAGCTGCT.......1880.131000000100000000000000000000000000000000000000000000000000000000
droMoj3
GTTGGGCGTGATTGCGCGTGTGGAAAAAATCGGTGGTGCCACGTCACGAGGCGAGAATAGCTATGGCATTGAGATCTTCTGCAAAGATATGCGCAATTTACGCTTCGCACACAAGCAGCAGAATCATTCGCGTCGCACAGTGTTCGAGAAGCTGCAGGCCAATGCATTTCCGCTCTCCTACAGCGGCAAACTCTTTGCGTTTGCTCATGCCGCTGCAGCTGCTCAGCCGTCGACGGCAAA-----TGC---AGCT---GTGA----------GCGCCGGCTGGGATG-GCTGGGCGGTGTACGAGCCGTTGGCCGAGCTGCGTCGCCTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................AATCGGTGGTGCCACGTCACGAGGC.....................................................................................................................................................................................................................................................................................2511.001100000
...............................................................................................................................................................................................................................CAGCCGTCGACGGCAAA-----TGC---AGCT---GT.....................................................................2611.001000001
....................................................................................................................................................................................................................................GTCGACGGCAAA-----TGC---AGCT---G......................................................................2011.001000100
droGri2
GCTGGGTGTGATAGCTCGCGTAGAGAAAATCGGTGGCGCCACGTCGCGCGGCGAGAACAGTTATGGCATTGAGATTTTCTGCAAGGACATGCGAAATCTACGCTTTGCGCACAAACAGCAAAATCACTCGCGTCGCACCGTATTCGAAAAATTGCAGTGGAATGCATTTCCGCTGTCCTATACGGGAAAACTGTTCGCCTTCACCCATGGGGCAG---------------------TGAG---------------------------------CGCCAGCTGGGATG-GCTGGTCAGTGTATGAGCCGCTGGCGGAGCTGCGTCGGCTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................................................................................................................................................CTGGCGGAGCTGCGTCGGCTG2111.00110
........................................................................................................................AAATCACTCGCGTCGCACCGTATTCG.......................................................................................................................................................................................2611.00110

Generated: 05/18/2015 at 09:48 AM