ID:

dsi_11814

 Coordinate:

3r:10046537-10046724 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.1 -36.0 -35.9

Flybase annnotation

exon [3r_10046725_10047682_+]; CDS [3r_10046725_10047682_+]; five_prime_UTR [3r_10046434_10046536_+]; exon [3r_10046434_10046536_+]; intron [3r_10046537_10046724_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAAACAAATTTCGTGGAGTTACTTTATCTTATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGCAATCGGTGGTCGCTTGTCAGTTAAGCCAGGGATAGCAAGGGGCTCGCACCGAGATTACAATGCCGCAGTTCTTTAAGTTCCGCAAGCTACGGACAAAGCGTCATAGCTCTTCTACCACTTCCGCCTCTGTTTTCATGTCCTCGTCCACGGCCACCAACCAGATGAACTATGACGGCCTCCTTTCCAAGTTGACCGACGAAAAACTGATGCT
************************************************************************.........((((((((((((.....))))...(((((((((.(((((........(((.....(((.(((.((((....((((.....))))..))))...))).)))......))).........)))))))).....))))))......))))))))******************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR618934
dsim w501 ovaries
 M025
embryo
 O002
Head
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
........................................................................CACGCAATCGGTGGTCGC...................................................................................................................................................................................................... 18 0 1 2.00 2 0 0 2 0 0 0
.........................................................................................................................................................................................................................................ACCAGATGAACTATGACGGCCT................................. 22 0 1 1.00 1 1 0 0 0 0 0
......AATTTCGTGGAGTTACTT........................................................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 1 0 0
..........................................................................CGCAATCGGTGGTCGCTTGTC................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................GTCCTCGTCCACGGCCACC........................................................ 19 0 1 1.00 1 0 0 0 1 0 0
............................................................................................................................ACCGAGATTACAATGCCG.................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................................................................................................................................AAACGATGAACTATGACGGCCT................................. 22 3 1 1.00 1 0 0 0 0 1 0
....................................................................................................................................................................................................................................CACCAACCAGATGAACTATGACGGCC.................................. 26 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................GCAGTTCTTTAAGTTCCG................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0
......................TTTATCTTTTTTTGTCAA........................................................................................................................................................................................................................................................ 18 1 3 0.33 1 0 1 0 0 0 0
........................................................................................................................................................................................................................................................................GTTGATCGACGAAAAAGT...... 18 2 4 0.25 1 1 0 0 0 0 0
.................................................................................................................................................................AGGTACGGACCAAGCG............................................................................................................... 16 2 16 0.19 3 0 3 0 0 0 0
.................................................................................................................................................................AGGTACGGACCAAGCGTCT............................................................................................................ 19 3 8 0.13 1 0 1 0 0 0 0
...........................................ATAAAGGGTGAGTAAAAA................................................................................................................................................................................................................................... 18 2 13 0.08 1 0 1 0 0 0 0
..................................................................................................................AGGGGCGCGCACCCGGAT............................................................................................................................................................ 18 3 19 0.05 1 0 0 0 0 0 1
................................................................................................GTTACGCCGGGGATAACA.............................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 1
................................................................................................GTTCAGCCAGCGATAG................................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 1 0
.....................................................................................................................................................................................................................................................................CAAGGTGACCGCCGAAA.......... 17 2 20 0.05 1 0 0 0 0 0 1

Anti-sense strand reads

TTTTGTTTAAAGCACCTCAATGAAATAGAATAAAACAGTTGTTTATTTGCCACTCATTTGTAAACATTAATCGTGCGTTAGCCACCAGCGAACAGTCAATTCGGTCCCTATCGTTCCCCGAGCGTGGCTCTAATGTTACGGCGTCAAGAAATTCAAGGCGTTCGATGCCTGTTTCGCAGTATCGAGAAGATGGTGAAGGCGGAGACAAAAGTACAGGAGCAGGTGCCGGTGGTTGGTCTACTTGATACTGCCGGAGGAAAGGTTCAACTGGCTGCTTTTTGACTACGA
********************************************************.........((((((((((((.....))))...(((((((((.(((((........(((.....(((.(((.((((....((((.....))))..))))...))).)))......))).........)))))))).....))))))......))))))))************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
..........................................................................................................................................CGGCGTCAAGAAATTCAAGGCGTTCG............................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................................................GGCTCTAATGTTAGGGCGTCA.............................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................GTCCCTATCGTTCCCCGAGCG.................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................................................GGGCGTCAAGAAATTCAAGGCGTTCG............................................................................................................................ 26 1 1 1.00 1 0 1 0 0 0 0 0
...........................................................................................................................................................................................................GCCAAAAGCACAGGTGCAGGT................................................................ 21 3 5 0.40 2 0 0 2 0 0 0 0
...........................................................................................................................................................................................AGATGGTTAAGGCGGTGA................................................................................... 18 2 8 0.38 3 0 0 0 2 0 1 0
..............CCTCAATGAACTAGATTAAA.............................................................................................................................................................................................................................................................. 20 2 4 0.25 1 0 0 0 0 1 0 0
........................................................................................................................................................................................AGAAGATGGTGATGGCA....................................................................................... 17 2 7 0.14 1 0 0 0 1 0 0 0
.....................................................TCATTTGTCAAAATTAATCGTA..................................................................................................................................................................................................................... 22 3 7 0.14 1 0 0 1 0 0 0 0
......................................................................................................................................................................................CGAGAAGTTGGTGAA........................................................................................... 15 1 11 0.09 1 1 0 0 0 0 0 0
...........................................................................................................CTAGCCTTCCCCGAGCGTC.................................................................................................................................................................. 19 3 13 0.08 1 0 0 0 0 0 0 1
..............................................................................................................................................................................CGCCGTAGCGAGAAGATCG............................................................................................... 19 3 13 0.08 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................AGATGGTTAAGGCGGGG.................................................................................... 17 2 13 0.08 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................TCGAGGGGATGGTGAAG.......................................................................................... 17 2 20 0.05 1 1 0 0 0 0 0 0
.........................GAGAATAAAACAGTT........................................................................................................................................................................................................................................................ 15 1 20 0.05 1 0 0 1 0 0 0 0
...................................................................................................................CCCCGAGCTTGGCGCT............................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................................................TACTGCAGGAGGAATG........................... 16 2 20 0.05 1 0 0 0 0 0 1 0
...........................................................................................................................................................................................AGATGGTTAAGGCGGTGAG.................................................................................. 19 3 20 0.05 1 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:10046487-10046774 + dsi_11814 AAA-------ACAA------ATTT----CGTGGAGTT--ACTTTATCTT-----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCGGT---------------------G--GT-CG-----------------------CTTGTC-----AGTTAAGC---------CAGGGATAGCAAGGGGCTCGCACC-----GAG--A---------------------TTACAATGCCGCAGTTCTTTAAGTTCCGCAAGCT---------------ACGGACAAAGC------GTC---ATAGCTCTTC---------TACCACTTCCGC---CTCTGTTTTCATGTCCTCGTCCA------CGGCCACCAACCAGATGAACTATGACGGCCTCCTTTCCAAGTTGACCGACGAAAAACTGATGCT
droSec2 scaffold_0:10765303-10765590 + AAA-------ACAA------ATTT----CGTGGAGTT--ACTTTATCTT-----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCGGT---------------------G--GT-CG-----------------------GTTGTC-----AGTTAAGC---------CAGGGCCAGCAAGGGGCTCGCACT-----GAG--A---------------------TTACAATGCCGCAGTTCTTTAAGTTCCGCAAGCT---------------GCGGACAAAGC------GTT---ATAGCTCTTC---------TACCACTTCCGC---CTCTGTTTTCATGTCCTCGTCCA------CGGCCACCAACCAGATGAACTATGACGGCCTCCTTTCCAAGTTGACCGACGAAAAACTCATGCT
dm3 chr3R:11182301-11182588 - AAA-------ACAA------ATTT----CGTGGAGTT--ACTTTATCTT-----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCGGT---------------------G--GT-CG-----------------------GTTGTC-----AGTTAAGC---------CAGGGCCAGCAAGGGGCTCGCACC-----AAG--A---------------------TTACAATGCCGCAGTTCTTTAAGTTCCGCAAGCT---------------GCGGACAAAGC------GTC---ATAGCTCTTC---------TACCACTTCCGC---CTCTGTTTTCATGTCCTCGTCCA------CGGCCACCAACCAGATGAACTATGACGGCCTCCTTTCCAAGTTGACCGACGAAAAACTGATGCT
droEre2 scaffold_4770:10707796-10708098 - ATAAGAAA-AACAA------ATTT----CGTGTAGTT--ACTTTATCTT-----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCGGT---------------------G--GT-CG-----------------------GTTGTC-----AGTTAAGC---------CAGGACCAGCAAGGGGCTCGCACC-----GAG--A---------------------TTACCATGCCTCAGTTCTTTAAGTTCCGCAAGCT---------------GCGGACAAAGC------GTCATAGTAGCTCATC---------TACCACTTCCGC---CTCTATTTTCATGTCCTCGTCCACGACCACGACCACCAAGCAGATGAACTATGACGGCCTCCTTTCCAAGTTGACCGACGAAAAACTGATGCT
droYak3 3R:15250000-15250302 + ATAAGAAA-AACAA------ATTT----CGTGTAGTT--ACTTTATCTT-----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCGGT---------------------G--GT-CG-----------------------GTTGCC-----AGTTAAGC---------CAGGGCCAGCAAGGGGCTCGCACC-----GAG--T---------------------TTGCCATGCCGCAGTTCTTTAAGTTCCGCAAGCT---------------GCGGACAAAGC------GTCATAGTAGCTCATC---------TACCACTTCCGC---CTCTATTTTCATGTCCTCGTCCACGACTACGGCCACCAAGCAGATGAACTATGACGGCCTCCTTTCCAAGTTGACCGACGAAAAACTGATGCT
droEug1 scf7180000409444:44596-44885 + ATAAGAA---ACAA------ATTT----CGTGTAGTT--ACTTTATCTT-----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCGGT---------------------G--GTTTG-----------------------CTTGTC-----AGTTGAAC---------CAGGGCCACCAAGTGGCTCGCACC-----GAG--A---------------------TTGCCATGCCGCAGTTCTTTAAGTTCCCTAAGCT---------------GCGAACAAAGC------GTC------GCTCATC---------TTCCACTTCCGC---CTCTGTTTACATGTCCCAATCTT------CGGCCTCTAAGCAGATGAACTATGACGGCCTTCTTTCCAAGTTGACCGACGAAAAACTGATGCT
droBia1 scf7180000302136:770518-770819 - ATAAGAAA-AACAA------ATTT----CGTATAGTT--ACTTTATCTT-----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCGGT---------------------G--GT-C------------------------GTTGTC-----AGTTGAGC---------CAGGGCCAGCAACTGGCTCGCACC-----GAG--A---------------------TTGCCATGCCGCAGTTCTTCAAGTTCCCCAAGTT---------------GCGGACAAAGC------GTCGTCGTCGCTCATCCACCTC---TTCCTCTTCCGC---CTCTGTTTTCATGTCCTCGTCCA------CGGCCACCAAGCAGATGAACTATGACGGCCTCCTCTCCAAGTTGACCGACGAGAAACTAATGCT
droTak1 scf7180000415769:1999233-1999548 + ATAAGAAA-AACAAAA----ATTT----CG---AGCA--ACTTTATCTTT----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCGGT---------------------G--GC-C------------------------GTTGTC-----AGTTGAGC---------CAGGGCCACCAAGTGGCTCGCACC-----GAGAGA---------------------TTGCCATGCCGCAGTTCTTCAAGTTTCCAAAACTACCGAAGTTTCCCAAGCGGACAAAGCATCGTCGTCGTGGTCGCTCATCCAGCACTTCCTCCTCTTCCGC---CTCTGTTTTCATGTCCATGTC------------------CCAGATGAACTATGACGGCCTCCTCTCCAAGTTGACCGACGAGAAACTGATGCT
droEle1 scf7180000491080:941825-942124 - ATAAGAAA-AACAA------ATTT----CGTATAGTT--ACTTTATCTT-----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCGGT---------------------G--GT-CG-----------------------GTTGTC-----AGTTGAGC---------CAGGGCCAGCAAGTGGCTCGCACC-----GAG--A---------------------TTGCCATGCCGCAGTTCTTTAAGTTCTCCAAGCT---------------GCGGACAAAGC------GTC---GTCGCTCATTATCCAC---TTCCACTTCCGT---CTCTGTTTTCATGTCCTCCCCCC------CGGCCACCAAACAGATGAACTATGACGGCCTCCTTTCCAAGTTGACCGACGAGAAACTGATGCT
droRho1 scf7180000779250:157027-157307 + ATAAGAAA-AACAA------ATTT----CGTATAGTT--ACTTTATCTT-----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCG---------------------------T-CG-----------------------GTTGTC-----AGTTGAGC---------CAGGGCCAGCAAGTGGCTCGCACC-----GAG--A---------------------TTGCTATGCCGCAGTTCTTTAAATTCTCCAAGCT---------------GCGGACAAAGC------GTC---GTCGCTCATC---------CTACACTTCCGC---CTCTGTTTTAATGTCCTCTTCCA---------------CGCAGATGAACTATGACCAAGTTATTTCCAAGTTGACCGACGACAAACTAATGCT
droFic1 scf7180000452523:525797-526090 - ATAAGAAA-AACAA------ATTT----CGTGTAGTT--ACTTTATCTT-----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCGGT---------------------G--GT-CG-----------------------GTTGTC-----AGTTGAGC---------CAGGGCCACCAAGTGGCTCACACC-----GCG--G---------------------TTATCATGCCGCAATTCTTTAAGTTCTCCAAGTT---------------GCGTACAAAGC------GTC---GTCGTTCATC---------GTCCACTTCCGC---CTCTGTTTTCATGTCCTCACCCG------CGACCACCAAGCAGATGAACTATGACGGCCTCCTCTCCAAGTTGACCGATGAAAAACTGATGCT
droKik1 scf7180000302639:1512986-1513262 - AAA-------ACAA------CT--------TGTAGTT----TTTATCTT-----TATCTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---A--CGGCAG-----C-------------G--GG-CG-----------------------AATCTC-----AGTTCAGC---------CAGGGCCAGCAAGTGGCTCGCACT-----GCC--G---------------------TTGCCATGCCCCAGTTCTTTAAGCTTCCCAAGCT---------------GCGAACAAAGC------GTCGTCGTCGCTCATC---------CGCCGTTTCCGC---CTCTGTTTTCATGACCC------------CGGCGCCCCAGCAGATGAACTATGA---CCTCCTCTCCAAGTTGACCGACGACAAACTGATGAT
droAna3 scaffold_12911:3394597-3394889 + AAAAGGAA-AACAA---GCAATTTTTTTGGTGTAGTTA-ACTTTATCTT-----TATCTGTCAACAAATAAACGGTGAGTAAACACTTGTAATTAGCACGC---A--CGGCAG-----T----------------GT-CA-----------------------GTTC--AGTTCAGTTCGGC---------CACGGCCAGCAAGACGCTCGTTCT-----GCC--A---------------------CTGCCATGCCCCAGTTCTTTAAATTTTCTAAGCT---------------TCGAACAAAGC------GTC---GTTGCTCATC---------TTCCGCTTCCGCTTCCTCTGTTTTCGTGC---------------------CCAAGCAGATGAACTATGATGGCCTGCTATCGAAGTTAACCGACGAGAAACTGATGAT
droBip1 scf7180000396640:259180-259460 + AAAAC-------AA---GCAATTTTTTGTGTGTAGTTA-ACTTTATCTT-----TATCTGTCAACAAATAAACGGTGAGTAAACACTTGTAATTAGCACGC---A--CGGCAC-----T----------------GT-CA-----------------------GTTC--AGTTTAGTTCGGC---------CACGGCCAGCAAGACGCTCGTTCT-----GCC--A---------------------TTGCCATGCCCCAGTTCTTTAAATTTTCTAAGCT---------------TCGAACAAAGC------GTC---GTCGCTCATC---------TTCCGCTTC------CTCTGTTTTTGTGTC---------------------CAAGCAGATGAACTATGATGGCTTGCTATCGAAGTTAACCGACGAGAAACTGATGAT
dp5 2:4123377-4123693 - ATAAGGAA-AACAAGAAGCAATTTTTCGTGTGTAGTTTACCTTTATCTT-----TATCTGTCAACAAATAAACAGTGAGTAAACATTTGTAATTAGCACGC---CCC-GGACGCTAGG----------CCGTGCTAT-CG-----------------------GCTGT----TCAGTTCAGT---------CAGGGCCAGCCAGTGGCTCGCAA----TTGCC--A---------------------TTGCCATGCCCCAGTTCTTCAAGTTTTCGAAACT---------------GCGAACAAAGC------GAC---GTAGTTCATC------------CAAATCTGA---TTTTGTTTTCATATCCCGCCCGA------CGACACCGCCGCAGATGAACTATGACGGCCTGCTGTCCAAGTTGACGGAGGACAAGCTGATGCT
droPer2 scaffold_7:231202-231518 + ATAAGGAA-AACAAGAAGCAATTTTTCGTGTGTAGTTTACCTTTATCTT-----TATCTGTCAACAAATAAACAGTGAGTAAACATTTGTAATTAGCACGC---CCC-GCACGCTAGG----------CCGTGCTAT-CG-----------------------GCTGT----TCAGTTCAGT---------CAGGGCCAGCCAGTGGCTCGCAA----TTGCC--A---------------------TTGCCATGCCCCAGTTCTTCAAGTTTTCGAAACT---------------GCGAACAAAGC------GAC---GTAGTTCATC------------CAAATCTGA---TTTTGTTTTCATATCCCCCCCGA------CGACACCGCCGCAGATGAACTATGACGGCCTGCTGTCCAAGTTGACGGAGGACAAGCTGATGCT
droWil2 scf2_1100000004902:4011295-4011634 - ATAAGACACAATAACAAGC-ATTTTTTGAGTGTAGTTAACTTTTATCTT-----TATCTGTAAACAAATAAACGGTGAGTAAACAATTGTAATTAGCACTC---C--CGG------GGCATAGTGTTGCCGAG--------CTGACTCAGTGTCAGTGTCACCGTCGTC-----AGTTCAGTGACAGTGCACAGGGCC------TGGCCCA----------TT--A---TTAAG-------GCGGCAGCAATATGCCCATTTTCTTTAAGT---------T---------------ACGAACAAAGC------GACGACGTCGCTGCTC---------ATCCATTTCCGT---ATCT---TCCAATTCCAACAC---CAACACCACCACCAACCAGATGAACTATGATGGCCTGCTCTCCAAGCTGACCGATGACAAATTGATGCT
droVir3 scaffold_12855:1787171-1787423 + A---------------------------------------CTTTATCATTCT--CATATTTAAACAAATAAATGGTGAGTAAATATCGGTAATCAGCACCA----CACGGCAG-----CAGAATGCTT-------------ATGAT---------------------TC-----AGTGGTAT---------CAGAGCCAGCAAGTGGCTCACACTGAATTGTC--T---------------------GTGCCATGCCCTCGTTTTTTAAATTATCTAAAAT---------------ACGTACAAAGC------GCC---GTCGCTCATC---------G---GCTTC---------------CAAAT---------------------CCAAACAGATGAACTATGATGGACTGCTCTCCAAGTTGACCGATGAAAAGCTGGTAAT
droMoj3 scaffold_6540:32065448-32065690 + ---------------------------------------------TC-T-----CATATTTAAACAAATAAACGGTGAGTAAATATCGGTAATCAGCACCAC--A--AGGTAG-----CAGAATGCCT-------------ATGAT---------------------TC-----AGTGGGGC---------AAGAGCCAGCGAGTGGCTCACATTGAATTGTC--T---------------------GTGCGATGCCATCGTTCTTTAAATTGTCGAAAAT---------------ACGTACAAAGC------GCC---GTCGCTCATC---------------------------CGTTTCCAAAT---------------------CCAAACAGATGAACTATGATGCACTGCTCTCACAGTTGACCGACGACAAGCTGATAAT
droGri2 scaffold_14830:174055-174362 + AAACTAAA-GCTCA-------------------------ACTTTATCATTCGCATATTTTTAAACAAATAAACGGTGAGTAAATATTGGTAATCAGCGGCACACACACAGACACGGGGCACAATG-----------C-CAAATGAT---------------------TC-----AGTGGAAT---------CACAGCCAGCAAGTGGCGCGCATT-----GAATTATTACTAACTGTGCCTTCGCCTGTGCCATGCC------CTTCAGATTTACAAAAAT---------------CCGTACAAAGC------GTC---GTCGCTCATC---------ATCAACATCATCTGCGGCTTTTCCCAATT---------------------CCAAACAGATGAACTATGATGGACTGCTCTCCCAGCTGACCGATGACAATCTGGTGTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAA-------ACAA------ATTT----CGTGGAGTT--ACTTTATCTT-----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCGGT---------------------G--GT-CG-----------------------CTTGTC-----AGTTAAGC---------CAGGGATAGCAAGGGGCTCGCACC-----GAG--A---------------------TTACAATGCCGCAGTTCTTTAAGTTCCGCAAGCT---------------ACGGACAAAGC------GTC---ATAGCTCTTC---------TACCACTTCCGC---CTCTGTTTTCATGTCCTCGTCCA------CGGCCACCAACCAGATGAACTATGACGGCCTCCTTTCCAAGTTGACCGACGAAAAACTGATGCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................CACGC---AATCGGT---------------------G--GT-CG-----------------------C..........................................................................................................................................................................................................................................................................................1812.00200200000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................ACCAGATGAACTATGACGGCCT.................................2211.00110000000000000000
.............A------ATTT----CGTGGAGTT--ACTT...................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
..................................................................................................CGC---AATCGGT---------------------G--GT-CG-----------------------CTTGTC-----................................................................................................................................................................................................................................................................................2111.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GTCCTCGTCCA------CGGCCACC........................................................1911.00100000100000000000
....................................................................................................................................................................................................................ACC-----GAG--A---------------------TTACAATGCCG............................................................................................................................................................................................1811.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................CACCAACCAGATGAACTATGACGGCC..................................2611.00110000000000000000
.................................................................................................................................................................................................................................................................GCAGTTCTTTAAGTTCCG...........................................................................................................................................................................1811.00100000000001000000
droSec2
AAA-------ACAA------ATTT----CGTGGAGTT--ACTTTATCTT-----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCGGT---------------------G--GT-CG-----------------------GTTGTC-----AGTTAAGC---------CAGGGCCAGCAAGGGGCTCGCACT-----GAG--A---------------------TTACAATGCCGCAGTTCTTTAAGTTCCGCAAGCT---------------GCGGACAAAGC------GTT---ATAGCTCTTC---------TACCACTTCCGC---CTCTGTTTTCATGTCCTCGTCCA------CGGCCACCAACCAGATGAACTATGACGGCCTCCTTTCCAAGTTGACCGACGAAAAACTCATGCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................CGCACT-----GAG--A---------------------TTACAATG...............................................................................................................................................................................................1812.0020002
..................................................................................................................................................................................AAGC---------CAGGGCCAGCAAGGGGC..............................................................................................................................................................................................................................................2111.0011000
dm3
AAA-------ACAA------ATTT----CGTGGAGTT--ACTTTATCTT-----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCGGT---------------------G--GT-CG-----------------------GTTGTC-----AGTTAAGC---------CAGGGCCAGCAAGGGGCTCGCACC-----AAG--A---------------------TTACAATGCCGCAGTTCTTTAAGTTCCGCAAGCT---------------GCGGACAAAGC------GTC---ATAGCTCTTC---------TACCACTTCCGC---CTCTGTTTTCATGTCCTCGTCCA------CGGCCACCAACCAGATGAACTATGACGGCCTCCTTTCCAAGTTGACCGACGAAAAACTGATGCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................AGGGGCTCGCACC-----AAG--A---------------------T......................................................................................................................................................................................................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000001000100000001000000000000000000100000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................ACC-----AAG--A---------------------TTACAATGCCG............................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATTT----CGTGGAGTT--ACTTTATCTT-----........................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AA------ATTT----CGTGGAGTT--ACTTTATCTT-----........................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CGGCCTCCTTTCCAAGTTGAC..................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................AATCGGT---------------------G--GT-CG-----------------------GTTGTC-----AG..............................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................CCTCGTCCA------CGGCCACCAACCA...................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
......................................................................................................................................................................................................................................................................................GCT---------------GCGGACAAAGC------GTC---ATAGCT.........................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TTAAGC---------CAGGGCCAGCAAGGGGCTCG...........................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...................................................................................................GC---AATCGGT---------------------G--GT-CG-----------------------GTTGTC-----AGT.............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................AATTAGCACGC---AATCGGT---------------------G--GT-....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................GTCAACAAATAAACGGTG.................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................T----CGTGGAGTT--ACTTTATCTT-----AT......................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................ATTTGTAATTAGCACGC---AATCGGT---------------------G--.......................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AA------ATTT----CGTGGAGTT--ACTTTAT................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................AAGCT---------------GCGGACAAAGC------GTC---ATAG...........................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................................................................................................................................................................................GCCAGCAAGGGGCTCGCACC-----AAG--A---------------------.......................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
.............................................................CAACAAATAAACGGTGAGTAA............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..................................................................AATAAACGGTGAGTAAACA.........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.................................................................................................ACGC---AATCGGT---------------------G--GT-CG-----------------------GTT........................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............A------ATTT----CGTGGAGTT--ACTT...................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGACGAAAAACTGATGCT2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................................................................ACGC---AATCGGT---------------------G--GT-CG-----------------------GTTG.......................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
....................................................................................................................................................................................GC---------CAGGGCCAGCAAGGGGCTCG...........................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................AATCGGT---------------------G--GT-CG-----------------------GTTGTC-----AGTTAAGC---------CA.............................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.................................................................................................................................................................................................................................................................GCAGTTCTTTAAGTTCCGCAAGCT---------------......................................................................................................................................................2411.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................CAGGGCCAGCAAGGGGCTCGCACC-----AAG--A---------------------T......................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AA------ATTT----CGTGGAGTT--ACTTTA.................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................................................................ACC-----AAG--A---------------------TTACAATGCCGCAGT........................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CTTTAAGTTCCGCAAGCT---------------G.....................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GCAAGCT---------------GCGGACAAAGC------GTC---...............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................TTT----CGTGGAGTT--ACTTTATC...............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................A---------------------TTACAATGCCGCAGTTCTT....................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................AGCAAGGGGCTCGCACC-----AAG--.............................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................CACC-----AAG--A---------------------TTACAATGCCGCAGTTC......................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................GC---------CAGGGCCAGCAAGGGGCTCGCA.........................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................AGCACGC---AATCGGT---------------------G--GT-CG-----------------------GTTG.......................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................TTT----CGTGGAGTT--ACTTTAT................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................ATCGGT---------------------G--GT-CG-----------------------GTTGTC-----AGTTAAG.........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................AGGGGCTCGCACC-----AAG--A---------------------TT.....................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................ATAAACGGTGAGTAAACAT........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........CAA------ATTT----CGTGGAGTT--ACTTTATCTT-----AT......................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TATGACGGCCTCCTTTCCAAG.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................GTC-----AGTTAAGC---------CAGGGCC........................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........................................................................................AATTAGCACGC---AATCGGT---------------------G--GT-C...................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................AGTTAAGC---------CAGGGCCAGCAAG..................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
.........................................................................................................ATCGGT---------------------G--GT-CG-----------------------GTTGTC-----AGTT............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
droEre2
ATAAGAAA-AACAA------ATTT----CGTGTAGTT--ACTTTATCTT-----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCGGT---------------------G--GT-CG-----------------------GTTGTC-----AGTTAAGC---------CAGGACCAGCAAGGGGCTCGCACC-----GAG--A---------------------TTACCATGCCTCAGTTCTTTAAGTTCCGCAAGCT---------------GCGGACAAAGC------GTCATAGTAGCTCATC---------TACCACTTCCGC---CTCTATTTTCATGTCCTCGTCCACGACCACGACCACCAAGCAGATGAACTATGACGGCCTCCTTTCCAAGTTGACCGACGAAAAACTGATGCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................GGACAAAGC------GTCATAGTAGCT.........................................................................................................................2111.0010100000
..................................................................................................................................................................................................................................................................................GCAAGCT---------------GCGGACAAAGC------GTCATA...............................................................................................................................2411.0011000000
..................................................................................................................................................................................................GACCAGCAAGGGGCTCGCACC-----GA................................................................................................................................................................................................................................2311.0011000000
....................................................................................................................................................................................GC---------CAGGACCAGCAAGGGG...............................................................................................................................................................................................................................................1811.0010000010
........................................................................................................................................................................................................................................................................................................................................................................TTCATGTCCTCGTCCACGACC.................................................................2111.0011000000
droYak3
ATAAGAAA-AACAA------ATTT----CGTGTAGTT--ACTTTATCTT-----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCGGT---------------------G--GT-CG-----------------------GTTGCC-----AGTTAAGC---------CAGGGCCAGCAAGGGGCTCGCACC-----GAG--T---------------------TTGCCATGCCGCAGTTCTTTAAGTTCCGCAAGCT---------------GCGGACAAAGC------GTCATAGTAGCTCATC---------TACCACTTCCGC---CTCTATTTTCATGTCCTCGTCCACGACTACGGCCACCAAGCAGATGAACTATGACGGCCTCCTTTCCAAGTTGACCGACGAAAAACTGATGCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................AAGCT---------------GCGGACAAAGC------GTCATAGTAGCT.........................................................................................................................2811.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................CTACGGCCACCAAGCAGATG...............................................2011.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................CGACTACGGCCACCAAGCAGAT................................................2211.00101000000000
..................................................................................................................................................................................AAGC---------CAGGGCCAGCAAGGGG...............................................................................................................................................................................................................................................2011.00101000000000
...............................................................................................................................................................................GTTAAGC---------CAGGGCCAGCAAGGGGCTC............................................................................................................................................................................................................................................2611.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................CTACGGCCACCAAGCAGATGAACTAT.........................................2611.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCCAAGTTGACCGACGAAAAACTGAT...2911.00100000010000
............................................................................................................................................................................................................................................................................................................................ATAGTAGCTCATC---------TACCACTTCCGC---CTCT.........................................................................................2911.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................CACGACTACGGCCACCAAGCAGATG...............................................2511.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTCCTTTCCAAGTTGACCGACGA............2311.00101000000000
..........................................................................................................................................................................................................AGGGGCTCGCACC-----GAG--T---------------------T......................................................................................................................................................................................................1811.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TATGACGGCCTCCTTTCCAAGTTGAC..................2611.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGATGAACTATGACGGC...................................2111.00101000000000
droEug1
ATAAGAA---ACAA------ATTT----CGTGTAGTT--ACTTTATCTT-----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCGGT---------------------G--GTTTG-----------------------CTTGTC-----AGTTGAAC---------CAGGGCCACCAAGTGGCTCGCACC-----GAG--A---------------------TTGCCATGCCGCAGTTCTTTAAGTTCCCTAAGCT---------------GCGAACAAAGC------GTC------GCTCATC---------TTCCACTTCCGC---CTCTGTTTACATGTCCCAATCTT------CGGCCTCTAAGCAGATGAACTATGACGGCCTTCTTTCCAAGTTGACCGACGAAAAACTGATGCTSizeHit CountTotal NormTotal
No Reads
droBia1
ATAAGAAA-AACAA------ATTT----CGTATAGTT--ACTTTATCTT-----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCGGT---------------------G--GT-C------------------------GTTGTC-----AGTTGAGC---------CAGGGCCAGCAACTGGCTCGCACC-----GAG--A---------------------TTGCCATGCCGCAGTTCTTCAAGTTCCCCAAGTT---------------GCGGACAAAGC------GTCGTCGTCGCTCATCCACCTC---TTCCTCTTCCGC---CTCTGTTTTCATGTCCTCGTCCA------CGGCCACCAAGCAGATGAACTATGACGGCCTCCTCTCCAAGTTGACCGACGAGAAACTAATGCTSizeHit CountTotal NormTotal
No Reads
droTak1
ATAAGAAA-AACAAAA----ATTT----CG---AGCA--ACTTTATCTTT----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCGGT---------------------G--GC-C------------------------GTTGTC-----AGTTGAGC---------CAGGGCCACCAAGTGGCTCGCACC-----GAGAGA---------------------TTGCCATGCCGCAGTTCTTCAAGTTTCCAAAACTACCGAAGTTTCCCAAGCGGACAAAGCATCGTCGTCGTGGTCGCTCATCCAGCACTTCCTCCTCTTCCGC---CTCTGTTTTCATGTCCATGTC------------------CCAGATGAACTATGACGGCCTCCTCTCCAAGTTGACCGACGAGAAACTGATGCTSizeHit CountTotal NormTotal
No Reads
droEle1
ATAAGAAA-AACAA------ATTT----CGTATAGTT--ACTTTATCTT-----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCGGT---------------------G--GT-CG-----------------------GTTGTC-----AGTTGAGC---------CAGGGCCAGCAAGTGGCTCGCACC-----GAG--A---------------------TTGCCATGCCGCAGTTCTTTAAGTTCTCCAAGCT---------------GCGGACAAAGC------GTC---GTCGCTCATTATCCAC---TTCCACTTCCGT---CTCTGTTTTCATGTCCTCCCCCC------CGGCCACCAAACAGATGAACTATGACGGCCTCCTTTCCAAGTTGACCGACGAGAAACTGATGCTSizeHit CountTotal NormTotal
No Reads
droRho1
ATAAGAAA-AACAA------ATTT----CGTATAGTT--ACTTTATCTT-----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCG---------------------------T-CG-----------------------GTTGTC-----AGTTGAGC---------CAGGGCCAGCAAGTGGCTCGCACC-----GAG--A---------------------TTGCTATGCCGCAGTTCTTTAAATTCTCCAAGCT---------------GCGGACAAAGC------GTC---GTCGCTCATC---------CTACACTTCCGC---CTCTGTTTTAATGTCCTCTTCCA---------------CGCAGATGAACTATGACCAAGTTATTTCCAAGTTGACCGACGACAAACTAATGCTSizeHit CountTotal NormTotal
No Reads
droFic1
ATAAGAAA-AACAA------ATTT----CGTGTAGTT--ACTTTATCTT-----ATTTTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---AATCGGT---------------------G--GT-CG-----------------------GTTGTC-----AGTTGAGC---------CAGGGCCACCAAGTGGCTCACACC-----GCG--G---------------------TTATCATGCCGCAATTCTTTAAGTTCTCCAAGTT---------------GCGTACAAAGC------GTC---GTCGTTCATC---------GTCCACTTCCGC---CTCTGTTTTCATGTCCTCACCCG------CGACCACCAAGCAGATGAACTATGACGGCCTCCTCTCCAAGTTGACCGATGAAAAACTGATGCTSizeHit CountTotal NormTotal
No Reads
droKik1
AAA-------ACAA------CT--------TGTAGTT----TTTATCTT-----TATCTGTCAACAAATAAACGGTGAGTAAACATTTGTAATTAGCACGC---A--CGGCAG-----C-------------G--GG-CG-----------------------AATCTC-----AGTTCAGC---------CAGGGCCAGCAAGTGGCTCGCACT-----GCC--G---------------------TTGCCATGCCCCAGTTCTTTAAGCTTCCCAAGCT---------------GCGAACAAAGC------GTCGTCGTCGCTCATC---------CGCCGTTTCCGC---CTCTGTTTTCATGACCC------------CGGCGCCCCAGCAGATGAACTATGA---CCTCCTCTCCAAGTTGACCGACGACAAACTGATGATSizeHit CountTotal NormTotal
No Reads
droAna3
AAAAGGAA-AACAA---GCAATTTTTTTGGTGTAGTTA-ACTTTATCTT-----TATCTGTCAACAAATAAACGGTGAGTAAACACTTGTAATTAGCACGC---A--CGGCAG-----T----------------GT-CA-----------------------GTTC--AGTTCAGTTCGGC---------CACGGCCAGCAAGACGCTCGTTCT-----GCC--A---------------------CTGCCATGCCCCAGTTCTTTAAATTTTCTAAGCT---------------TCGAACAAAGC------GTC---GTTGCTCATC---------TTCCGCTTCCGCTTCCTCTGTTTTCGTGC---------------------CCAAGCAGATGAACTATGATGGCCTGCTATCGAAGTTAACCGACGAGAAACTGATGATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................TGATGGCCTGCTATCGAAGTT.....................2111.001100000
...............................................................................................................................................................................................................CTCGTTCT-----GCC--A---------------------CTGCCATGCCCCA..........................................................................................................................................................................................2511.001100000
...................................................................................................................................................................................................GCCAGCAAGACGCTCGTTCT-----..................................................................................................................................................................................................................................2011.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................ATGAACTATGATGGCCTGCTATCGA.........................2511.001100000
............................................................................................................................................................................................................ACGCTCGTTCT-----GCC--A---------------------CTGCCATGCCCCA..........................................................................................................................................................................................2811.001100000
droBip1
AAAAC-------AA---GCAATTTTTTGTGTGTAGTTA-ACTTTATCTT-----TATCTGTCAACAAATAAACGGTGAGTAAACACTTGTAATTAGCACGC---A--CGGCAC-----T----------------GT-CA-----------------------GTTC--AGTTTAGTTCGGC---------CACGGCCAGCAAGACGCTCGTTCT-----GCC--A---------------------TTGCCATGCCCCAGTTCTTTAAATTTTCTAAGCT---------------TCGAACAAAGC------GTC---GTCGCTCATC---------TTCCGCTTC------CTCTGTTTTTGTGTC---------------------CAAGCAGATGAACTATGATGGCTTGCTATCGAAGTTAACCGACGAGAAACTGATGATSizeHit CountTotal NormTotal
No Reads
dp5
ATAAGGAA-AACAAGAAGCAATTTTTCGTGTGTAGTTTACCTTTATCTT-----TATCTGTCAACAAATAAACAGTGAGTAAACATTTGTAATTAGCACGC---CCC-GGACGCTAGG----------CCGTGCTAT-CG-----------------------GCTGT----TCAGTTCAGT---------CAGGGCCAGCCAGTGGCTCGCAA----TTGCC--A---------------------TTGCCATGCCCCAGTTCTTCAAGTTTTCGAAACT---------------GCGAACAAAGC------GAC---GTAGTTCATC------------CAAATCTGA---TTTTGTTTTCATATCCCGCCCGA------CGACACCGCCGCAGATGAACTATGACGGCCTGCTGTCCAAGTTGACGGAGGACAAGCTGATGCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACGGAGGACAAGCTGATG..2111.0010100000000
.....................................................................................................................................................................................................................A----TTGCC--A---------------------TTGCCATGCCCCAGT........................................................................................................................................................................................2211.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................TTTTCATATCCCGCCCGA------CGA.............................................................2111.0010100000000
ATAAGGAA-AACAAGAAGCAATTTTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCAAGTTGACGGAGGAC...........2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................A---TTTTGTTTTCATATCCCGCT.........................................................................2111.0010100000000
..................................................................................................CGC---CCC-GGACGCTAGG----------CCGTG.........................................................................................................................................................................................................................................................................................................................2111.0010000010000
droPer2
ATAAGGAA-AACAAGAAGCAATTTTTCGTGTGTAGTTTACCTTTATCTT-----TATCTGTCAACAAATAAACAGTGAGTAAACATTTGTAATTAGCACGC---CCC-GCACGCTAGG----------CCGTGCTAT-CG-----------------------GCTGT----TCAGTTCAGT---------CAGGGCCAGCCAGTGGCTCGCAA----TTGCC--A---------------------TTGCCATGCCCCAGTTCTTCAAGTTTTCGAAACT---------------GCGAACAAAGC------GAC---GTAGTTCATC------------CAAATCTGA---TTTTGTTTTCATATCCCCCCCGA------CGACACCGCCGCAGATGAACTATGACGGCCTGCTGTCCAAGTTGACGGAGGACAAGCTGATGCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................GTTCTTCAAGTTTTCGAAACT---------------G.....................................................................................................................................................2212.002200000
...................................................................................................................................................................................AGT---------CAGGGCCAGCCAGTGGCT.............................................................................................................................................................................................................................................2111.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................TGAACTATGACGGCCTGCT..............................1911.001010000
droWil2
ATAAGACACAATAACAAGC-ATTTTTTGAGTGTAGTTAACTTTTATCTT-----TATCTGTAAACAAATAAACGGTGAGTAAACAATTGTAATTAGCACTC---C--CGG------GGCATAGTGTTGCCGAG--------CTGACTCAGTGTCAGTGTCACCGTCGTC-----AGTTCAGTGACAGTGCACAGGGCC------TGGCCCA----------TT--A---TTAAG-------GCGGCAGCAATATGCCCATTTTCTTTAAGT---------T---------------ACGAACAAAGC------GACGACGTCGCTGCTC---------ATCCATTTCCGT---ATCT---TCCAATTCCAACAC---CAACACCACCACCAACCAGATGAACTATGATGGCCTGCTCTCCAAGCTGACCGATGACAAATTGATGCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................CGTCGTC-----AGTTCAGTGACA....................................................................................................................................................................................................................................................................1914.00400031
.................................................................................................................................................................................................................................................................CATTTTCTTTAAGT---------T---------------ACGAAC................................................................................................................................................2111.00101000
........................................................................................................................................................................................................................................................................................................................................................................................................CCAGATGAACTATGATGGCCT.................................2111.00101000
...............................................................................................................................................................................................................CCCA----------TT--A---TTAAG-------GCGGCAGCTT...................................................................................................................................................................................................2211.00101000
...........................................................................................................................................................GTGTCACCGTCGTC-----AGTTCAGT........................................................................................................................................................................................................................................................................2211.00100010
...............................................................................................................................................................CACCGTCGTC-----AGTTCAGTGACAGTGCA...............................................................................................................................................................................................................................................................2711.00101000
................................................................................................................................................................................TTCAGTGACAGTGCACAGGGCC------T.................................................................................................................................................................................................................................................2311.00100001
................................................................................................................................................................ACCGTCGTC-----AGTTCAGTGACAG...................................................................................................................................................................................................................................................................2211.00101000
......................................................................................................................................................TGTCAGTGTCACCGTCGTC-----................................................................................................................................................................................................................................................................................1911.00100100
.............................................................................................................................................................GTCACCGTCGTC-----AGTTCAGTG.......................................................................................................................................................................................................................................................................2111.00101000
......................................................................................................................................................TGTCAGTGTCACCGTCGTC-----AG..............................................................................................................................................................................................................................................................................2111.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................GATGAACTATGATGGCCT.................................1811.00110000
..............................................................................................................................................................................................................................................................................................................................................................................TCCAACAC---CAACACCACCACCAACCAGA.................................................2811.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................ATGAACTATGATGGCCTGC...............................1911.00101000
.......................................................................................................................................................................................ACAGTGCACAGGGCC------TGGCCC............................................................................................................................................................................................................................................2111.00101000
............................................................................................................................................................................................GCACAGGGCC------TGGCCCA----------TT--A---TT.......................................................................................................................................................................................................................2211.00101000
............................................................................................................................GTTGCCGAG--------CTGACTCAG........................................................................................................................................................................................................................................................................................................1811.00110000
droVir3
A---------------------------------------CTTTATCATTCT--CATATTTAAACAAATAAATGGTGAGTAAATATCGGTAATCAGCACCA----CACGGCAG-----CAGAATGCTT-------------ATGAT---------------------TC-----AGTGGTAT---------CAGAGCCAGCAAGTGGCTCACACTGAATTGTC--T---------------------GTGCCATGCCCTCGTTTTTTAAATTATCTAAAAT---------------ACGTACAAAGC------GCC---GTCGCTCATC---------G---GCTTC---------------CAAAT---------------------CCAAACAGATGAACTATGATGGACTGCTCTCCAAGTTGACCGATGAAAAGCTGGTAATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................TGTC--T---------------------GTGCCATGCCCTC..........................................................................................................................................................................................1812.002000000000000000000000000000000000000000000000000000000000000002
..............................................................................................................................................................................AGTGGTAT---------CAGAGCCAGCAAG..................................................................................................................................................................................................................................................2112.002000000000000000000000000110000000000000000000000000000000000000
......................................................................................................................................................................................................................TGAATTGTC--T---------------------GTGCC..................................................................................................................................................................................................1511.001000000000000000000000000000000000000000000000100000000000000000
..........................................................................................................................ATGCTT-------------ATGAT---------------------TC-----AGTGGTAT---------CAG............................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................................................................................GAATTGTC--T---------------------GTGCCATGCCC............................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGTTGACCGATGAAAAGC.......2111.001000000000000000000000000100000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAGTTGACCGATGAAAAGCTGGTAA.2811.001000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................CTGAATTGTC--T---------------------GTGCCATGCC.............................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TTTTAAATTATCTAAAAT---------------ACGT..................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
..................................................CT--CATATTTAAACAAATAAATGGTGAGT..............................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................AAAGC------GCC---GTCGCTCATC---------G---G.......................................................................................................2011.001000000001000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGATGAAAAGCTGGT...1811.001000000000100000000000000000000000000000000000000000000000000000
...............................................................................................................AG-----CAGAATGCTT-------------ATGAT---------------------TC-----AGTGGTAT---------CAGAGCCAGCAAGT.................................................................................................................................................................................................................................................4111.001000000000000000000000000000000000000000000000000000000001000000
............................................................................................................................................................................................................TGGCTCACACTGAATTGTC--T---------------------GT.....................................................................................................................................................................................................2211.001000000000100000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TTATCTAAAAT---------------ACGTACAAAGC------GCC---...............................................................................................................................2511.001000000000000000000000000000000000100000000000000000000000000000
.....................................................................................................................................................................................................................CTGAATTGTC--T---------------------GTGCCATGCCCTC..........................................................................................................................................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................ATGAT---------------------TC-----AGTGGTAT---------CAG............................................................................................................................................................................................................................................................1811.001000000000000000000000000010000000000000000000000000000000000000
droMoj3
---------------------------------------------TC-T-----CATATTTAAACAAATAAACGGTGAGTAAATATCGGTAATCAGCACCAC--A--AGGTAG-----CAGAATGCCT-------------ATGAT---------------------TC-----AGTGGGGC---------AAGAGCCAGCGAGTGGCTCACATTGAATTGTC--T---------------------GTGCGATGCCATCGTTCTTTAAATTGTCGAAAAT---------------ACGTACAAAGC------GCC---GTCGCTCATC---------------------------CGTTTCCAAAT---------------------CCAAACAGATGAACTATGATGCACTGCTCTCACAGTTGACCGACGACAAGCTGATAATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTCTCACAGTTGACCGAC..............2111.001100000
................................................................................................................................................................................................................................................................CATCGTTCTTTAAATTGTC...........................................................................................................................................................................1911.001000010
.........................................................................................................................................................................................................................ATTGTC--T---------------------GTGCGATGCCATCGTTCT.....................................................................................................................................................................................2511.001000100
.......................................................................................................................................................................................................GCGAGTGGCTCACATTGAAT...................................................................................................................................................................................................................................2011.001100000
.......................................................................................................................................................................................................................GAATTGTC--T---------------------GTGCGATGCCATCGTT.......................................................................................................................................................................................2511.001000100
droGri2
AAACTAAA-GCTCA-------------------------ACTTTATCATTCGCATATTTTTAAACAAATAAACGGTGAGTAAATATTGGTAATCAGCGGCACACACACAGACACGGGGCACAATG-----------C-CAAATGAT---------------------TC-----AGTGGAAT---------CACAGCCAGCAAGTGGCGCGCATT-----GAATTATTACTAACTGTGCCTTCGCCTGTGCCATGCC------CTTCAGATTTACAAAAAT---------------CCGTACAAAGC------GTC---GTCGCTCATC---------ATCAACATCATCTGCGGCTTTTCCCAATT---------------------CCAAACAGATGAACTATGATGGACTGCTCTCCCAGCTGACCGATGACAATCTGGTGTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 07:38 PM