ID:

dsi_11777

 Coordinate:

3r:11702009-11702158 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.9 -11.5 -11.2

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey-

Sense Strand Reads

CCTGGGAGGCGGCGGCGGTGGATTCGGACAGCGCCAGGATAACCGCACCGGTGGCGGCAACAACCAGTCTAACGGACCGCTGCGCGGTGCCGGAAATGGACAGAGTGGTGGTGGCAACTACGGACGTCGCTAAGGGAATTGTCCAGCAGCACGACATCAGCAAAAGCATCAACAAATGAGCAACAGCAGCAGTAGCGACTATAACATCAAGAACAGCAGCAACAACCCAACGTTAAAAACATCGACTTCT
*****************************************************************************((((((((..(((((....))).))..))).))))).............**************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 M023
head
 GSM343915
embryo
.............................................................................CGCTGCGCGGTGCCGGAAATGGACAGAGT................................................................................................................................................ 29 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.........................................................................................CCGGAAATGGACAGAGTGGTG............................................................................................................................................ 21 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................CTATAACATCAAGAACAGCAGCAAC........................... 25 0 1 2.00 2 0 1 0 0 0 0 0 1 0 0 0
..................TGGATTTGGACAGCGCCAGG.................................................................................................................................................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TGGCAACTACGGACG............................................................................................................................ 15 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
..........................................................................GACGCCTGCCCGGTGCCGGA............................................................................................................................................................ 20 3 4 1.75 7 2 1 0 0 1 0 3 0 0 0 0
...............................................................................CTGCCCGGTGCCGGA............................................................................................................................................................ 15 1 6 1.17 7 1 0 0 0 0 0 4 0 2 0 0
..............................................................................................................................................................................................AGTAGCGACTATAACATCAAGAACAGC................................. 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................AAATGGACAGAGTGGTGGTGG........................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AACAACCCGACGTAAAAAA........... 19 2 3 1.00 3 0 1 0 0 0 0 0 0 2 0 0
........................................................................................................................................................................................................ATAACATCAAGAACAGCAGCAACAACC....................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..................TGGATTCGGACAGCGCCAGG.................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................TGGCAACTACGGACGTCGCTAAGGGA................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AACAACCCAACGTTAAAAACATCGAC.... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
................................................................................................................................................................................................TAGCGACTATAACATCAAGAACAGCAG............................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................GGTGGCAACTACGGACGTC.......................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................ACGGACGTCGCTAAG.................................................................................................................... 15 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................AGCAGTAGCGACTATAACATCAAGAACAGC................................. 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................AACTACAGACGTCGCT....................................................................................................................... 16 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................TGGTGGCAACTACGGACGTTTT........................................................................................................................ 22 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................CATCAGCAAAAGCATCAACAAAT......................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................AAATGGACAGAGTGGTGGTG......................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................GCGACTATAACATCAAGAAC.................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................TGCCGGAAATGGACAGAGTGGTGGTG......................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................GACCGCTCCGCGGTGCCGGAAATGGACA.................................................................................................................................................... 28 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................CGGAAATGGACAGAGTGGTG............................................................................................................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TATAACATCAAGAACAGCAGCAACAACC....................... 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................TACGGACGTCGCTAAGGGAATTGTC........................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CAGTAGCGACTATAACATCAAGAAC.................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................CAGCAGCAGTAGCGACTA................................................. 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..........................................................................GACGCCTGCCCGGTGCCGGAA........................................................................................................................................................... 21 3 2 1.00 2 0 0 0 0 0 0 2 0 0 0 0
............................................................................................................................................GTCCAGCAGCACGACATCAGCA........................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................AGCAGTAGCGACTATAACATCAAGAA..................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
.............................................................AACCAGTCTAACGGACCGCTG........................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.................................CCAGGATAACCGCACCGGTGGCGGC................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CAACAAATGAGCAACAGCAGCAGTAG....................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................ACCAGTCTAACGGACCGCTGAGCGGTGC................................................................................................................................................................ 28 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
....................GATTCGGACAGCGCCAGGATA................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................GGACAGAGTGGTGGTGGCAACTACGGA.............................................................................................................................. 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..............GCGGTGGATTCTGACAGCGCCT...................................................................................................................................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
............................................................................................................................................................................................................................AACAACCCGACGTAAAA............. 17 2 15 0.87 13 3 0 0 0 3 0 6 0 1 0 0
..............................................................................CCTGCCCGGTGCCGGAA........................................................................................................................................................... 17 2 5 0.80 4 2 0 0 0 0 0 1 0 1 0 0
...........................................................................ACGCCTGCCCGGTGCCGGA............................................................................................................................................................ 19 3 9 0.78 7 0 0 0 0 0 0 3 0 4 0 0
............................................................................................................................................................................................................................AACAACCCGACGTAAAAA............ 18 2 7 0.71 5 1 1 0 0 1 0 1 0 1 0 0
..................................................................................................GCCAGACTGGAGGTGGCAAC.................................................................................................................................... 20 3 20 0.70 14 0 14 0 0 0 0 0 0 0 0 0
.................................................................................................................GCGCCTACGGACGTCGCT....................................................................................................................... 18 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
........................................AACCGCACCTGTGGCGCC................................................................................................................................................................................................ 18 2 8 0.38 3 0 3 0 0 0 0 0 0 0 0 0
........................................AACCGCACCTGTGGCGCCA............................................................................................................................................................................................... 19 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................CTGCCCGGTGCCGGAAGG......................................................................................................................................................... 18 3 20 0.25 5 0 2 0 0 0 0 0 0 0 3 0
.................................................................................................GGCCAGACTGGAGGTGGCAAC.................................................................................................................................... 21 3 9 0.22 2 0 2 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................AAGAACAGCAGCAAC........................... 15 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................................ACTGCGCGGTTCCGGAA........................................................................................................................................................... 17 2 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0
..............................................................................CCTGCCCGGTGCCGGA............................................................................................................................................................ 16 2 20 0.15 3 0 0 0 0 0 0 2 0 1 0 0
........................................AACCGCACCTGTGGCGCCG............................................................................................................................................................................................... 19 3 20 0.15 3 0 3 0 0 0 0 0 0 0 0 0
................................................................................................................GCCAACTAGCGACGTCGCT....................................................................................................................... 19 3 14 0.14 2 0 2 0 0 0 0 0 0 0 0 0
...........................................................................ACCCCTGCCCGGTGCTGGAA........................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0
............................................................CAAGGAGTCTAACGGAC............................................................................................................................................................................. 17 2 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AACAACCCGACGTAAA.............. 16 2 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0
........................................AACCGCACCTGTGGCGCCAG.............................................................................................................................................................................................. 20 3 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................CAGACTGGAGGTGGCAAC.................................................................................................................................... 18 2 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................AACAGCAGCAACAACC....................... 16 0 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................CAACCCGACGTAAAAAA........... 17 2 19 0.05 1 0 0 0 0 0 0 1 0 0 0 0
.............................................................................GCCTGCCCGGTGCCGGAA........................................................................................................................................................... 18 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
...................TGATTCGGACAACGCCAAG.................................................................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................CCAGACTGGAGGTGGCAAC.................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................GACCGCTGAGCGGTTC................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

GGACCCTCCGCCGCCGCCACCTAAGCCTGTCGCGGTCCTATTGGCGTGGCCACCGCCGTTGTTGGTCAGATTGCCTGGCGACGCGCCACGGCCTTTACCTGTCTCACCACCACCGTTGATGCCTGCAGCGATTCCCTTAACAGGTCGTCGTGCTGTAGTCGTTTTCGTAGTTGTTTACTCGTTGTCGTCGTCATCGCTGATATTGTAGTTCTTGTCGTCGTTGTTGGGTTGCAATTTTTGTAGCTGAAGA
****************************************************************************************************************************((((((((..(((((....))).))..))).))))).............***************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR902008
ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 M024
male body
.................................................................................................CCGGTCTGACCTCCACCGTTG.................................................................................................................................... 21 3 9 34.00 306 299 0 0 0 0 7 0 0 0 0 0
.............................................................TTGGTCAGATTGCCTGGCGACG....................................................................................................................................................................... 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................CCGGTCGTCGTGCTGTAGTC.......................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TCGTTGTTGGGTTGCAATTTTTGTAG....... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................CGTCGTGCTGTAGTCGTT....................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GTTGGGTTGCAATTTTTGTAG....... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................................CCCTGTCTGACCTCCACCGTTG.................................................................................................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GTTTACTCGATGTCGTC............................................................. 17 1 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................TCGTGCTGTAGTCGTTT...................................................................................... 17 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
........................................TTGGCGTGGACACCG................................................................................................................................................................................................... 15 1 11 0.18 2 2 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GTTTACTCGATGTCGT.............................................................. 16 1 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................AGATGATGCCTGCCGCGAT...................................................................................................................... 19 3 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................CCGTTGATTCCTGCA........................................................................................................................... 15 1 8 0.13 1 0 0 0 0 0 0 0 1 0 0 0
.......................................ATTGTCGTGGCCTCCGC.................................................................................................................................................................................................. 17 2 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AGTAGTTCTTGTCCTCGT............................. 18 2 20 0.10 2 0 0 0 0 0 0 0 2 0 0 0
...............................................................................................................ACCGTTGATTCCTGCACC......................................................................................................................... 18 2 10 0.10 1 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................CGGTCTGACCTCCACCGTTG.................................................................................................................................... 20 3 20 0.10 2 1 0 0 0 0 0 0 0 1 0 0
........................................TTGGCGTGGACACCGCA................................................................................................................................................................................................. 17 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................GTCTGACCTCCACCGTTG.................................................................................................................................... 18 2 11 0.09 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TCGGTCTTCGTGCTGTAGTC.......................................................................................... 20 3 12 0.08 1 0 0 0 0 0 0 0 0 0 1 0
............................................................................................................................................................................GTTCACTCGATGTCGTCG............................................................ 18 2 15 0.07 1 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................ACCGTTGATCCCTGCAC.......................................................................................................................... 17 2 19 0.05 1 0 0 0 0 0 0 0 1 0 0 0
........................................TTGGCGTGGACACCGCGGC............................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GGTGGTTGGCAATTTTTGT......... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................................TGGTTCTTGTCGACGTTG........................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
...............................................................................................................ACCGTTGATTCCTGCAC.......................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:11701959-11702208 - dsi_11777 CCTGGGAGGCG---GCGGCGG---T---GGATTCGGACAGCGCCAGGATAACCGCACCGGTGGC---GGCAACAACCAGTCTAACGGACCGCTGCGCGGTGCCGGAAATGGACA---GAGTG------------GTGGTGGCAACTACGGACGTCGCTAAG--GGAA---TT--GTC------------------------------------------------------------------------------------CAGCAGC-----ACGACATCAGCAA-------AAGCATCAACAAATGAGC---A---AC---A---GCAGCAGTAG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------CAGCAGCAACAACCCAACGTTAA------AAACATCGACTTCT
droSec2 scaffold_0:12529771-12530020 - CCTGGGAGGCG---GCGGCGG---T---GGATTCGGACAGCGCCAGGATAACCGCACCGGTGGC---GGCAACAACCAGTCTAACGGACCGCTGCGCGGTGCCGGAAATGGACA---GAGTG------------GTGGTGGCAACTACGGACGTCGCTAAG--GGAA---TT--GTC------------------------------------------------------------------------------------CAGCAGC-----ACGACATCAGCAA-------AAGCATCAACAAATGAGC---A---AC---A---GCAGCAGTAG-------------------------------------------------------CG--------------------------------AATATAACATCA------AG---AA------------------------------CAGCAGCAACAACCCAACGTTAA------AAACATCGACTTCT
dm3 chr3R:9477159-9477405 + CCTGGGAGGC------GGCGG---T---GGATTCGGACAGCGCCAGGATAACCGCACCGGTGGC---GGCAACAACCAGTCTAACGGACCGCTGCGCGGTGCCGGAAATGGACA---GAGTG------------GTGGTGGCAACTACGGACGTCGCTAAG--GGAA---TT--GTC------------------------------------------------------------------------------------CAGCAGC-----ACGACATCAGCAA-------AAGCATCAACAAATGAGC---A---AC---G---GCAGCAGTAG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------CAGCAGCAACAACCCAACGTTAA------AAACATCGACTTCT
droEre2 scaffold_4770:12158247-12158485 - CCTAGGAGGC------GGCGG---T---GGATTTGGACAGCGCCAGGATAACCGCACCAGCGGG---GGCAACAACCAGTCCAACGGACCGCTGCGCGGTGCCGGCAATGGACA---GAGTG------------GTGGTGGTAACTACGGACGTCGCTAAG--GGAA---TT--TCC------------------------------------------------------------------------------------CA---GC-----ACGACATCAGCAA-------AAGCATCAACAAATGAG---------C---A---GCAGCAGTAG-------------------------------------------------------CG--------------------------------ACTACAACAAC------------AA------------------------------CAGCAGCAACAACCCAACGTTAAA-----AAACATCGACTTCT
droYak3 3R:13785823-13786097 + CCTGGGAGGC------GGTGG---T---GGATTTGGACAGCGCCAGGATAACCGCACCAGCGGC---GGCAACAACCAGTCTAACGGACCGCTGCGCGGTGCCGGAAATGGACA---GACTG------------GTGGTGGCAACTACGGACGTCGCTAAG--AAAA---TT--CCA------------------------------------------------------------------------------------AA---GC-----ATGACATCAGCAA-------AAGCATCAACAAATGAGC------------A---GCAGCAGTAGCGACAACAACAAAAACAGCAG---------CAGT----------------AG---CG--------------------------------ACTACAACAACAACAAAAAC---AG------------------------------CAGCAGCAACAACCCAACGTTAAA-----AAACATCGACTTCT
droEug1 scf7180000409802:497941-498194 - TTTGGGAGGC------GGCGG---T---GGATTCGGGCAGCGCCAGGATAATCGCACCGGCGGT---GGCAACAACCAGTCCAACGGACCGCTGCGCGGGGCCGGAAACGGACA---GAGCG------------GTGGTGGCAACTACGGACGTCGCTAAA--GGAA---AT--CCT------------------------------------------------------------------------------------TA---GC-----ACGGCATCAGCAAAAGCAA-GAGCATCAACAA--GAACAGCA---GC---A---GCAGCAGTAG-------------------------------------------------------C-----------------------------------CACAACAATA------AC---AG------------------------------CAGCAGCAACAACCCAACGTTAAACAAACAAACATCGACTTCT
droBia1 scf7180000302402:2207735-2207976 + CTTGGGCGGC------GGCGG---T---GGATTTGGACAGCGCCAGGACAACCGCACCGGCGGC---GGCAACAACCAGTCCAACGGACCGCTGCGCGGAGCCGGCAATGGACA---GAGCG------------GTGGTGGCAACTACGGACGTCGCTAAA--GGAA---TT--CCT------------------------------------------------------------------------------------CA---GC-----A---CATCAGCAAATGTAA-AGGCATCGGCAA--GAGC---A---GC---A---GCAGCGGTAG-------------------------------------------------------C-----------------------------------CACAACAATA------AC---AG------------------------------CAGCAGCAACAACCCAACGTTAA------AAACATCGACTTCT
droTak1 scf7180000415380:277259-277521 + ACTGGGCGGC------GGAGG---T---GGATTCGGACAGCGCCAGGATACCCGCACCGGCGGCGGCGGCAACAACCAGTCCAACGGACCGCTGCGCGGTGCCGGAAACGGACA---GAGCG------------GTGGTGGCAACTACGGACGTCGCTAAA--GGACGACAT--CCT------------------------------------------------------------------------------------CA---GC-----ACATCACCAGCAGATTCAA-AAGCATCAGCAA--GAGCAGCA---GC---AGCAGCAGCAGTAG-------------------------------------------------------CC--------------------------------GCCACAACAATA------ACAGCAG------------------------------CAGCAGCAAGAACCCAACGTTAA------AAACATCGACTTCT
droEle1 scf7180000491047:1719867-1720096 - CCTGGGCGGG------GGCGG---T---GGATTCGGGCAGCGCCAGGATAACCGCACCGGCGGC---GGCAACAACCAGTCCAACGGACCGCTGCGCGGCGCCGGAAATGGACA---AACCA------------GTGGTGGCAACTACGGACGTCGCTAAA--GGAA---TT--CCT------------------------------------------------------------------------------------CA---GC-----A---CATCAGCAA-------AAGCATCAACAACT-----------AC---A---GCAGCAGTAG-------------------------------------------------------C-----------------------------------CACAAATAC------------AA------------------------------GAACAGCAACAACCCAACGTTAA------GAACATCAACTTCT
droRho1 scf7180000778106:4733-4977 - TCTGGGTGGCG---GCGGTGG---T---GGATTTGGGCAGCGCCAGGATAACCGCACCGGCGGA---GGCAACAACCAGTCTAACGGACCGCTGCGCGGTGCCGGAAATGGACA---GAGCG------------GTGGTGGCAACTACGGACGTCGCTAAA--GAAA---TT--TCT------------------------------------------------------------------------------------CA---GC-----ACGACATCAGCAAAAGCAA-AAGCATCTACAA-----C---A---ACAGCA---GCAGCAGTAG-------------------------------------------------------C-----------------------------------CACAAAAAT------------AA------------------------------GAACAGCAACAACCCAACGTTAA------GAACATCGACTTCT
droFic1 scf7180000453906:19784-20038 - CTTGGGCGGCG---GCGGCGG---T---GGGTTCGGACAGCGCCAGGATAATCGCACCGGCGGC---GGCAACAACCAGTCCAACGGACCGCTGCGCGGAGCCGGAAATGGACA---GAGCG------------GTAGTGGCAACTACGGACGTCGCTAAA--GGAG---TT--CCT------------------------------------------------------------------------------------CA---GC-----ACGACATCAGCAAAAGCAAAAAGCATCAACAA--CAACAGCA---GC---AGCAGCAGCAGTAG-------------------------------------------------------TA--------------------------------GCCACAAAAAT------------AA------------------------------GAACAGCAAGAACCCAACGTTAA------GAACATCGACTTCT
droKik1 scf7180000302392:324461-324723 - CTTGGGAGG---------CGG---T---GGATTTGGTCAGCGCCAGGATAACCGCACAGGCGGC---GGCAACAATCAGTCCAACGGACCGCTGCGCGGTGCCGGCAACGGACAGCAGGCCG------------GCGGTGGTAACTACGGACGTCGCTAAGAAGGAA---AT--CCA------------------------------------------------------------------------------------CT---GCATAGCACCACATCAGCGA-------TAACATTGGCAGAT-----------------------GCAGAAG-------------------------------------------------------CAAACAAAGAAGAAGAAAAAAGAAGAAACTAAAAACTAAAA------------------------------------------------CTAAATCAGCAACCCAACGTTAA------GAACATCGACTTCT
droAna3 scaffold_13340:2025278-2025565 + CCTTGGAGGCG---GTGGCGG---T---GGATTTGTACCGCGCCAGGATAACCGCAGCGGTGGT---GGAAACAACCAGTCCAATGGTCCGCTGCGCGGTGCCGGCAATGGACA---GAGCG------------G---TGGCAGTTACGGGCGTCGCTAAA--AAAT-ATATATCCA------------------------------------------------------------------------------------TC---AC-----ACTACTACAGCAACAGCAA-CAGCAACAGCAA----ACAGCGACTAC---A---GCAACAGTAG-------------------------------------------------------CA--------------------------------A-CACAACAACA------ACAGCGGCAGTAGCAACATAACAAACTAAACAACAAACAAAAAAAGAAACCCATCGTTAA------GAACATCGACTTCT
droBip1 scf7180000396712:2306484-2306749 - CCTGGGAGGTG---GTGGCGG---T---GGATTTGGGCCACGCCAGGACAACCGCAGCGGTGGC---GGAAACAACCAGTCCAACGGTCCGCTGCGCGGTGCCGGCAATGGACA---GACCG------------GTCAAGGCAATTACGGGCGTCGCTAAA--AAACTAAAT--CCA------------------------------------------------------------------------------------TC---AC-----A---AACCAG-----------------AACACAAGAGC---A---AC---A---GCAGCAGCAA-------------------------------------CGGC---CACAGTAG---CA--------------------------------A-CATAACAACA------ACAGCGGCAGTAGCAACATA--------A-------ACAACAAAAAAAACCCATCGTTAA------GAACATCGACTTCT
dp5 2:16917830-16918052 + TCTGGGCGG---------CGG---G---GGCTTCGGGCCACGCAACGACAACCGAAGCGGCGGG---GGTAGCAGTCAGTCCAACGGACCGCTGCGCGGTGCCGGCAACGGACA---GGCTGGTGGTGGTGGTGGCGGTGGCAACTACGGCCGTCGCTAAA--GCAG---GT--GTC---------------------------------------------------------------------------------------------------------------------------------------------------------GCAGTCG-------------------------------------------CCAGTGCAGAAACAAC-------------------AGA--------A--ACACCA---------AC---AA------------------------------AAACAACAACAACCCAACGTTTA------GAACATCGACTTCT
droPer2 scaffold_0:3472361-3472587 - TCTGGGCGG---------CGG---G---GGCTTCGGGCCACGCAACGACAACCGAAGCGGCGGG---GGTAGCAGTCAGTCCAACGGACCGCTGCGCGGTGCCGGCAACGGACA---GACTGGTGGTGGTGGTGGCGGTGGCAACTACGGCCGTCGCTAAA--GCAG---GT--GTC--------------------------------------------------------------------------------------------------GCCAGCCGC-------------------------------------------------------------------------------------------------CAGTGCAGAAACAAC-------------------AGA--------A--ACACCAACA------AC---AA------------------------------CAACAACAACAACCCAACGTTTA------GAACATCGACTTCT
droWil2 scf2_1100000004943:6560356-6560662 + TCTTGGCGGCG---GCGGCGGTGGTGGAAGTTTTGGCCAACGCAACGATAATCGC---GGCAGT---GG---TAATCAATCCAATGGACCTCTACGGGGCTCCGGCAACGGACA---GAGCG---------GCGGAGGTGGCAACTATGGACGTCGCTAAA--AACC-ACATA-GTCCAAACAAAACAAAAAAAACATCAAACAAAGCAACATTAAAAAGCAG-----------------------------------------------------------------------------------------------CC---A---GCAGCAGTAGC--CAATCGCAACACCAGCAGGCCTGACATCGGTAATTGGCCGCAGC---AG---CA--------------------------------A-GAAATAAA---------T---AA------------------------------TAGCAACAGCAGCCCAACGTTTAA-----AAACATCGACATCT
droVir3 scaffold_13047:9250599-9250812 + ----------------GGCGC---T---AGTTTTGGACAGCGCAATGACAATCGCAGCAGCGGT---GGTGGTAATCAATCCAACGGACCACTGCGCGGTCCTGGCAATGGACA---GACCG------------GTGGCGGTAATTATGGACGCCGTTAAA--ATGCA------------------------------------------------------G--------AGCGT-------AATGAGAACCG------GTG---GC-----CACTCATT---------------------------------------------------------------------------------------GG--AT-GGCCGCCAGT--------------------------------------------GCAAAAA---------T---AA------------------------------CAACAGCAACAACCCAACGTCA---------GCATCGATTTCT
droMoj3 scaffold_6540:31383257-31383509 - CATGGGCGGCAATAATGGTGC---T---AGCTTTGGACAGCGCAATGACAATCGCAGCGGCGGT---GG---CAATCAGTCCAACGGACCGCTGCGCGGTGCCGGCAATGGACA---AACCGGTAGCG---GCGGTAGCGGCAATTATGGACGCCGTTAAA--ATGCA------------------------------------------------------G--------AGTAG-------AAT-----CTGCACTAGTTG---GC-----CACA--------------------------------------------------G--GCAGT---------------------------------CG--AT-GGCCGACAC---------ATC-------------------AAA--------ACTATACCAACAAC---AAC---AG------------------------------CAACAACAACAACCCAACGTCA---------GCATCGATTTCT
droGri2 scaffold_14906:3995086-3995353 - TATGGGCGGCAATGGAGGCGC---C---AGTTTTGGTCAGCGGAACGATAATCGCAGCAGCGGT---GGCGGCAATCAATCCAATGGACCGCTGCGCGGTGCGGGCAACGGACA---GAGCGGCGGTGGTGGCGGCGGCGGCAATTATGGTCGCCGTTAAT--CA---------------------------------------------------------GCGGGCGGCAGTGTAACAAAAAATAAAAACCGC-----CTG---GC-----CTGACATT---------------------------------------------------------------------------------------GG--ACGGGCCGCCGG---------AAC-------------------AGA--------AATATAACAAGC------A----AA------------------------------TAGCAGCAACAGCCCAACGTCA-------GAGCATCGATTTCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCTGGGAGGCG---GCGGCGG---T---GGATTCGGACAGCGCCAGGATAACCGCACCGGTGGC---GGCAACAACCAGTCTAACGGACCGCTGCGCGGTGCCGGAAATGGACA---GAGTG------------GTGGTGGCAACTACGGACGTCGCTAAG--GGAA---TT--GTC------------------------------------------------------------------------------------CAGCAGC-----ACGACATCAGCAA-------AAGCATCAACAAATGAGC---A---AC---A---GCAGCAGTAG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------CAGCAGCAACAACCCAACGTTAA------AAACATCGACTTCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................CGCTGCGCGGTGCCGGAAATGGACA---GAGT...................................................................................................................................................................................................................................................................................................................................................................................................................2912.00200000002000000000
.....................................................................................................CCGGAAATGGACA---GAGTG------------GTG...................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000000000020000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CTATAACATCA------AG---AA------------------------------CAGCAGCAAC.................................2512.00201000000001000000
..........................................................................................................................................TGGCAACTACGGACG...................................................................................................................................................................................................................................................................................................................................................................................1512.00200000000002000000
............................................................................................................................................................................................................................................................................................................................................AGTAG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------CAGC.......................................2711.00110000000000000000
.........................................................................................................AAATGGACA---GAGTG------------GTGGTGG...............................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACATCA------AG---AA------------------------------CAGCAGCAACAACC.............................2711.00100000000000010000
........................T---GGATTCGGACAGCGCCAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000010000
..........................................................................................................................................TGGCAACTACGGACGTCGCTAAG--GGA......................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACCCAACGTTAA------AAACATCGAC....2611.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................TAG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------CAGCAG.....................................2711.00100000000000010000
........................................................................................................................................GGTGGCAACTACGGACGTC.................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
..................................................................................................................................................ACGGACGTCGCTAAG--.........................................................................................................................................................................................................................................................................................................................................................................1511.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................AGCAGTAG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------CAGC.......................................3011.00100000001000000000
.......................................................................................................................................TGGTGGCAACTACGGACGTTTT...............................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
.....................................................................................................................................................................................................................................................................................CATCAGCAA-------AAGCATCAACAAAT.........................................................................................................................................................................................................................2311.00100000000000100000
.........................................................................................................AAATGGACA---GAGTG------------GTGGTG................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
................................................................................................................................................................................................................................................................................................................................................G-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------C..........................................2011.00100000010000000000
...................................................................................................TGCCGGAAATGGACA---GAGTG------------GTGGTG................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
......................................................................................................CGGAAATGGACA---GAGTG------------GTG...................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TATAACATCA------AG---AA------------------------------CAGCAGCAACAACC.............................2811.00100010000000000000
.................................................................................................................................................TACGGACGTCGCTAAG--GGAA---TT--GTC------------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................................2511.00100000001000000000
...........................................................................................................................................................................................................................................................................................................................................CAGTAG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------C..........................................2511.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................C---A---GCAGCAGTAG-------------------------------------------------------CG--------------------------------ACTA..............................................................................................1811.00100010000000000000
..............................................................................................................................................................................GTC------------------------------------------------------------------------------------CAGCAGC-----ACGACATCAGCA...............................................................................................................................................................................................................................................2211.00100000001000000000
.........................................................................................................................................................................................................................................................................................................................................AGCAGTAG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------...........................................2611.00100000000100000000
.........................................................................AACCAGTCTAACGGACCGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
..........................................CCAGGATAACCGCACCGGTGGC---GGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
...........................................................................................................................................................................................................................................................................................................CAACAAATGAGC---A---AC---A---GCAGCAGTAG-------------------------------------------------------....................................................................................................................................2611.00100000000001000000
.............................GATTCGGACAGCGCCAGGATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
.............................................................................................................GGACA---GAGTG------------GTGGTGGCAACTACGGA.....................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................A------AG---AA------------------------------CAGCAGCAAC.................................1550.20100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------------------CAGCAGCAACAACC.............................16140.07100000000001000000
droSec2
CCTGGGAGGCG---GCGGCGG---T---GGATTCGGACAGCGCCAGGATAACCGCACCGGTGGC---GGCAACAACCAGTCTAACGGACCGCTGCGCGGTGCCGGAAATGGACA---GAGTG------------GTGGTGGCAACTACGGACGTCGCTAAG--GGAA---TT--GTC------------------------------------------------------------------------------------CAGCAGC-----ACGACATCAGCAA-------AAGCATCAACAAATGAGC---A---AC---A---GCAGCAGTAG-------------------------------------------------------CG--------------------------------AATATAACATCA------AG---AA------------------------------CAGCAGCAACAACCCAACGTTAA------AAACATCGACTTCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................................................................................AGCAA-------AAGCATCAACAAATGAGC---..................................................................................................................................................................................................................2311.0010010
..............................................................................................................................................AACTACGGACGTCGCTAAG--GG.......................................................................................................................................................................................................................................................................................................................................................................2111.0010010
..............................................................................................................................................AACTACGGACGTCGCTAAG--G........................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...............................................................................................................................................ACTACGGACGTCGCTAAG--GGAA---T.................................................................................................................................................................................................................................................................................................................................................................2311.0010100
............................GGATTCGGACAGCGCCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000
.................................................................................................................A---GAGTG------------GTGGTGGCAACTACGGAC....................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACATCA------AG---AA------------------------------CAGCAGCAACA................................2411.0010001
......................................................................................................................................GTGGTGGCAACTACGGACGTC.................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.....................................................................................................................................................................................................................................................................................CATCAGCAA-------AAGCATCAAC.............................................................................................................................................................................................................................1911.0010010
................................................................................................................................................CTACGGACGTCGCTAAG--GGAA---TT--GTC------------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................................2611.0010010
.......GGCG---GCGGCGG---T---GGATTCGGACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
......................................................................................GACCGCTGCGCGGTGCCGGAAATGGA............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
.........................................................................................................................................................................................................................................................................................................ATCAACAAATGAGC---A---AC---A---GCAGC................................................................................................................................................................................................2311.0010010
..........................................................................................................................................................................................................................................................................................................................A---AC---A---GCAGCAGTAG-------------------------------------------------------CG--------------------------------AA................................................................................................1820.5010010
dm3
CCTGGGAGGC------GGCGG---T---GGATTCGGACAGCGCCAGGATAACCGCACCGGTGGC---GGCAACAACCAGTCTAACGGACCGCTGCGCGGTGCCGGAAATGGACA---GAGTG------------GTGGTGGCAACTACGGACGTCGCTAAG--GGAA---TT--GTC------------------------------------------------------------------------------------CAGCAGC-----ACGACATCAGCAA-------AAGCATCAACAAATGAGC---A---AC---G---GCAGCAGTAG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------CAGCAGCAACAACCCAACGTTAA------AAACATCGACTTCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................................GTAG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------CA.........................................24117.001700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TGCCGGAAATGGACA---GAGTG------------GTG...................................................................................................................................................................................................................................................................................................................................................................................................23112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010005000000003000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GTAG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------CAGCA......................................27111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................GACCGCTGCGCGGTGCCGGAAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................23110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009
........................................................................................................................................................................................................................................................................................................................................................................................................CG--------------------------------ACTATAACATCA------AG---AA------------------------------CAGCA......................................2319.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000450000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................G---T---GGATTCGGACAGCGCCAGGATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2418.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GCAGTAG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------C..........................................2618.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000240000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GTAG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---A..........................................................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................G-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------CAGCA......................................2417.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CG--------------------------------ACTATAACATCA------AG---AA------------------------------CAG........................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------CAGC.......................................2417.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000100000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................CGACATCAGCAA-------AAGCATCAACAAA..........................................................................................................................................................................................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGGC------GGCGG---T---GGATTCGGACAGCGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACATCA------AG---AA------------------------------CAGCAGCAAC.................................2317.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000040001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CG--------------------------------ACTATAACATCA------AG---AA------------------------------CAGCAG.....................................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................AGCAA-------AAGCATCAACAAATGAGC---..................................................................................................................................................................................................................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................AGTAG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------CAGCA......................................2816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000420000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GTAG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------CAGC.......................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000010000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................AAG--GGAA---TT--GTC------------------------------------------------------------------------------------CAGCAGC-----...........................................................................................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................AACTACGGACGTCGCTAAG--GGA......................................................................................................................................................................................................................................................................................................................................................................2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................ACGGACGTCGCTAAG--GGAA---TT--GTC------------------------------------------------------------------------------------CAGC...................................................................................................................................................................................................................................................................2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GTAG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------...........................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................CGCACCGGTGGC---GGCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TGCGCGGTGCCGGAAATGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AAATGAGC---A---AC---G---GCAGCAGT.............................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
..........................................................................................................AATGGACA---GAGTG------------GTGGTGGC..............................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GCAGTAG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------CA.........................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................ATCAACAAATGAGC---A---AC---G---GCAGC................................................................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................AA-------AAGCATCAACAAATGAGC---A---AC---.........................................................................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000003001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AAATGAGC---A---AC---G---GCAGCAGTAG-------------------------------------------------------CG--------------------------------ACT...............................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TAG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------CAGCAG.....................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................GGAAATGGACA---GAGTG------------GTGGT.................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TATAACATCA------AG---AA------------------------------CAGCAG.....................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................CGCTGCGCGGTGCCGGAAATGGA............................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---AA------------------------------CAGCAGCAACAACCC............................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................ACTACGGACGTCGCTAAG--GGAA---T.................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------CAGCAGC....................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000200000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GTAG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------CAG........................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................ACTACGGACGTCGCTAAG--GGAA---TT--..............................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................................................................................................AGC-----ACGACATCAGCAA-------AAGCATC................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................GCGCGGTGCCGGAAATGGACA---GAGT...................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................G--------------------------------ACTATAACATCA------AG---AA------------------------------C..........................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TGCGCGGTGCCGGAAATGGACA---GAGTG------------......................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCA------AG---AA------------------------------CAGCAGCAACAAC..............................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CG--------------------------------ACTATAACATCA------AG---AA------------------------------CAGCAGC....................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TAG-------------------------------------------------------CG--------------------------------ACTATAACATCA------AG---AA------------------------------CAGCAGC....................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................A------AG---AA------------------------------CAGCAGCAACAACCC............................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................ATGGACA---GAGTG------------GTGGTGGC..............................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000
....................................................................................................GCCGGAAATGGACA---GAGTG------------GTGG..................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TGCCGGAAATGGACA---GAGTG------------GTGG..................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
....................................................................................CGGACCGCTGCGCGGTGCCGGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................GCTGCGCGGTGCCGGAAATGGA............................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................G--------------------------------ACTATAACATCA------AG---AA------------------------------CAGCAGC....................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020010000000000000000000000000
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..........................................................................................GCTGCGCGGTGCCGGAAATGGACA---G......................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................C---A---AC---G---GCAGCAGTAG-------------------------------------------------------CG--------------------------------ACTATAA...........................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GCGG---T---GGATTCGGACAGCGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................GAAATGGACA---GAGTG------------GTGGTGGCAAC...........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................TGCCGGAAATGGACA---GAGTG------------GTT...................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TGCGCGGTGCCGGAAATGGACA---G......................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TACGGACGTCGCTAAG--GGAA---TT--GTC------------------------------------------------------------------------------------C......................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TGCGCGGTGCCGGAAATGGACA---GAGTG------------G.....................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CTATAACATCA------AG---AA------------------------------CAGCAGCAACAACC.............................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AAGCATCAACAAATGAGC---A---AC---G---GCA..................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................ACGTCGCTAAG--GGAA---TT--GTC------------------------------------------------------------------------------------CAGC...................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
droEre2
CCTAGGAGGC------GGCGG---T---GGATTTGGACAGCGCCAGGATAACCGCACCAGCGGG---GGCAACAACCAGTCCAACGGACCGCTGCGCGGTGCCGGCAATGGACA---GAGTG------------GTGGTGGTAACTACGGACGTCGCTAAG--GGAA---TT--TCC------------------------------------------------------------------------------------CA---GC-----ACGACATCAGCAA-------AAGCATCAACAAATGAG---------C---A---GCAGCAGTAG-------------------------------------------------------CG--------------------------------ACTACAACAAC------------AA------------------------------CAGCAGCAACAACCCAACGTTAAA-----AAACATCGACTTCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................AACTACGGACGTCGCTAAG--G........................................................................................................................................................................................................................................................................................................................................................................2013.0030000030
............................................................................................................................................GTAACTACGGACGTCGCTAAG--.........................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
........................................................................................................................................................................................................................................................................................................CATCAACAAATGAG---------C---A---GCAGCAGT.............................................................................................................................................................................................2411.0010000010
...........................................................................................................................................GGTAACTACGGACGTCGCTAAG--G........................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
..................................................................................................................................................................................................................................................................................................................TGAG---------C---A---GCAGCAGTAG-------------------------------------------------------CG--------------------------------ACTACA............................................................................................2411.0010000010
........................................CGCCAGGATAACCGCACCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
.........................................................................................................................................................................................................................................................................................................ATCAACAAATGAG---------C---A---GCAGCAGT.............................................................................................................................................................................................2311.0010001000
.............................................................................................................GGACA---GAGTG------------GTGGTGGTAACC..........................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
...........................................................................................................................................GGTAACTACGGACGTCGCTA.............................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
...............................TTTGGACAGCGCCAGGATAACCGCACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
............................................................................................................................................................................................................................................................................................................................................AGTAG-------------------------------------------------------CG--------------------------------ACTACAACAAC------------AA------------------------------CAGCAGC....................................2711.0011000000
..............................................................................................................................................AACTACGGACGTCGCTAAG--GG.......................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...............................................................................................................................................ACTACGGACGTCGCTAAG--.........................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.......................................................................................................GGCAATGGACA---GAGTG------------GTGGT.................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
......................................................................................................................................................................................................................................................................A---GC-----ACGACATCAGCAA-------AAGCATCAACAA...........................................................................................................................................................................................................................2811.0011000000
...........................................................................................................................................................................................................................................................................................................CAACAAATGAG---------C---A---GCAGCAGTAG-------------------------------------------------------....................................................................................................................................2311.0011000000
..............................................................................GTCCAACGGACCGCTGCGCGGTGCCGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
........................................................................................................................................GGTGGTAACTACGGACGC..................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000
............................................................................................................................................................................................................................................................................................AA-------AAGCATCAACAAATGAG---------C---A---GC...................................................................................................................................................................................................2311.0010000100
....................................................................................................GCCGGCAATGGACA---GAGTG------------......................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
................................................................................................................................................................................................................................................................................................................AATGAG---------C---A---GCAGCAGTAG-------------------------------------------------------CG--------------------------------..................................................................................................2011.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAACAAC------------AA------------------------------CAGCAGC....................................1940.2511000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAAC------------AA------------------------------CAGCAGCAACA................................21200.0511000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC------------AA------------------------------CAGCAGCAACAAC..............................20200.0510000010
droYak3
CCTGGGAGGC------GGTGG---T---GGATTTGGACAGCGCCAGGATAACCGCACCAGCGGC---GGCAACAACCAGTCTAACGGACCGCTGCGCGGTGCCGGAAATGGACA---GACTG------------GTGGTGGCAACTACGGACGTCGCTAAG--AAAA---TT--CCA------------------------------------------------------------------------------------AA---GC-----ATGACATCAGCAA-------AAGCATCAACAAATGAGC------------A---GCAGCAGTAGCGACAACAACAAAAACAGCAG---------CAGT----------------AG---CG--------------------------------ACTACAACAACAACAAAAAC---AG------------------------------CAGCAGCAACAACCCAACGTTAAA-----AAACATCGACTTCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................ATGAGC------------A---GCAGCAGTAGCGACAACAACA................................................................................................................................................................................28119.0019000000000019
...........................................................................................................................................GGCAACTACGGACGTCGCTAAG--AAA......................................................................................................................................................................................................................................................................................................................................................................2512.00200000000002
......................................................................................................................................GTGGTGGCAACTACGGACGTCGCT..............................................................................................................................................................................................................................................................................................................................................................................2412.00201100000000
.............................................................................................................................................................................................................................................................................................................ACAAATGAGC------------A---GCAGCAGTAGCGA........................................................................................................................................................................................2411.00100000010000
.........................................GCCAGGATAACCGCACCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
...............................TTTGGACAGCGCCAGGATAACCGCACCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000
................................................................................................................................................................................................................................................................................................................AATGAGC------------A---GCAGCAGTAGCGA........................................................................................................................................................................................2111.00100000010000
........................................................................................................................................................................................................................................................................................................................................................AACAAAAACAGCAG---------CAGT----------------AG---CG--------------------------------A.................................................................................................2311.00100000010000
...........................................................................................................................................................................................................................................................................................................CAACAAATGAGC------------A---GCAGCAGTA............................................................................................................................................................................................2211.00101000000000
.........................................................................................................................................................................................................................................................................................................ATCAACAAATGAGC------------A---GCAGC................................................................................................................................................................................................2011.00100000010000
.......................................................................................................................................TGGTGGCAACTACGGACGTC.................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
..............................................................................................................................................AACTACGGACGTCGCTAAG--AAAA---TT--..............................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.......................................................................................................................................................................................................................................................................................................................................GCAGCAGTAGCGACAACAAC.................................................................................................................................................................................2011.00101000000000
..............................................................................................................................................AACTACGGACGTCGCTAAG--AAA......................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...........................................................................................................................................................................................................................................................................................................CAACAAATGAGC------------A---GCAGCAGT.............................................................................................................................................................................................2111.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................CG--------------------------------ACTACAACAACAACAAAAAC---AG------------------------------C..........................................2511.00101000000000
.................................................................................................................................................................................................................................................................................................................ATGAGC------------A---GCAGCAGTAGCGAC.......................................................................................................................................................................................2111.00110000000000
...............................................................................................................................................ACTACGGACGTCGCTAAG--AAA......................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..........................................................................................GCTGCGCGGTGCCGGAAA................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
..........................................................................................GCTGCGCGGTGCCGGAAATGGACA---GACT...................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
droEug1
TTTGGGAGGC------GGCGG---T---GGATTCGGGCAGCGCCAGGATAATCGCACCGGCGGT---GGCAACAACCAGTCCAACGGACCGCTGCGCGGGGCCGGAAACGGACA---GAGCG------------GTGGTGGCAACTACGGACGTCGCTAAA--GGAA---AT--CCT------------------------------------------------------------------------------------TA---GC-----ACGGCATCAGCAAAAGCAA-GAGCATCAACAA--GAACAGCA---GC---A---GCAGCAGTAG-------------------------------------------------------C-----------------------------------CACAACAATA------AC---AG------------------------------CAGCAGCAACAACCCAACGTTAAACAAACAAACATCGACTTCTSizeHit CountTotal NormTotal
No Reads
droBia1
CTTGGGCGGC------GGCGG---T---GGATTTGGACAGCGCCAGGACAACCGCACCGGCGGC---GGCAACAACCAGTCCAACGGACCGCTGCGCGGAGCCGGCAATGGACA---GAGCG------------GTGGTGGCAACTACGGACGTCGCTAAA--GGAA---TT--CCT------------------------------------------------------------------------------------CA---GC-----A---CATCAGCAAATGTAA-AGGCATCGGCAA--GAGC---A---GC---A---GCAGCGGTAG-------------------------------------------------------C-----------------------------------CACAACAATA------AC---AG------------------------------CAGCAGCAACAACCCAACGTTAA------AAACATCGACTTCTSizeHit CountTotal NormTotal
No Reads
droTak1
ACTGGGCGGC------GGAGG---T---GGATTCGGACAGCGCCAGGATACCCGCACCGGCGGCGGCGGCAACAACCAGTCCAACGGACCGCTGCGCGGTGCCGGAAACGGACA---GAGCG------------GTGGTGGCAACTACGGACGTCGCTAAA--GGACGACAT--CCT------------------------------------------------------------------------------------CA---GC-----ACATCACCAGCAGATTCAA-AAGCATCAGCAA--GAGCAGCA---GC---AGCAGCAGCAGTAG-------------------------------------------------------CC--------------------------------GCCACAACAATA------ACAGCAG------------------------------CAGCAGCAAGAACCCAACGTTAA------AAACATCGACTTCTSizeHit CountTotal NormTotal
No Reads
droEle1
CCTGGGCGGG------GGCGG---T---GGATTCGGGCAGCGCCAGGATAACCGCACCGGCGGC---GGCAACAACCAGTCCAACGGACCGCTGCGCGGCGCCGGAAATGGACA---AACCA------------GTGGTGGCAACTACGGACGTCGCTAAA--GGAA---TT--CCT------------------------------------------------------------------------------------CA---GC-----A---CATCAGCAA-------AAGCATCAACAACT-----------AC---A---GCAGCAGTAG-------------------------------------------------------C-----------------------------------CACAAATAC------------AA------------------------------GAACAGCAACAACCCAACGTTAA------GAACATCAACTTCTSizeHit CountTotal NormTotal
No Reads
droRho1
TCTGGGTGGCG---GCGGTGG---T---GGATTTGGGCAGCGCCAGGATAACCGCACCGGCGGA---GGCAACAACCAGTCTAACGGACCGCTGCGCGGTGCCGGAAATGGACA---GAGCG------------GTGGTGGCAACTACGGACGTCGCTAAA--GAAA---TT--TCT------------------------------------------------------------------------------------CA---GC-----ACGACATCAGCAAAAGCAA-AAGCATCTACAA-----C---A---ACAGCA---GCAGCAGTAG-------------------------------------------------------C-----------------------------------CACAAAAAT------------AA------------------------------GAACAGCAACAACCCAACGTTAA------GAACATCGACTTCTSizeHit CountTotal NormTotal
No Reads
droFic1
CTTGGGCGGCG---GCGGCGG---T---GGGTTCGGACAGCGCCAGGATAATCGCACCGGCGGC---GGCAACAACCAGTCCAACGGACCGCTGCGCGGAGCCGGAAATGGACA---GAGCG------------GTAGTGGCAACTACGGACGTCGCTAAA--GGAG---TT--CCT------------------------------------------------------------------------------------CA---GC-----ACGACATCAGCAAAAGCAAAAAGCATCAACAA--CAACAGCA---GC---AGCAGCAGCAGTAG-------------------------------------------------------TA--------------------------------GCCACAAAAAT------------AA------------------------------GAACAGCAAGAACCCAACGTTAA------GAACATCGACTTCTSizeHit CountTotal NormTotal
No Reads
droKik1
CTTGGGAGG---------CGG---T---GGATTTGGTCAGCGCCAGGATAACCGCACAGGCGGC---GGCAACAATCAGTCCAACGGACCGCTGCGCGGTGCCGGCAACGGACAGCAGGCCG------------GCGGTGGTAACTACGGACGTCGCTAAGAAGGAA---AT--CCA------------------------------------------------------------------------------------CT---GCATAGCACCACATCAGCGA-------TAACATTGGCAGAT-----------------------GCAGAAG-------------------------------------------------------CAAACAAAGAAGAAGAAAAAAGAAGAAACTAAAAACTAAAA------------------------------------------------CTAAATCAGCAACCCAACGTTAA------GAACATCGACTTCTSizeHit CountTotal NormTotal
No Reads
droAna3
CCTTGGAGGCG---GTGGCGG---T---GGATTTGTACCGCGCCAGGATAACCGCAGCGGTGGT---GGAAACAACCAGTCCAATGGTCCGCTGCGCGGTGCCGGCAATGGACA---GAGCG------------G---TGGCAGTTACGGGCGTCGCTAAA--AAAT-ATATATCCA------------------------------------------------------------------------------------TC---AC-----ACTACTACAGCAACAGCAA-CAGCAACAGCAA----ACAGCGACTAC---A---GCAACAGTAG-------------------------------------------------------CA--------------------------------A-CACAACAACA------ACAGCGGCAGTAGCAACATAACAAACTAAACAACAAACAAAAAAAGAAACCCATCGTTAA------GAACATCGACTTCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................GAGCG------------G---TGGCAGTTACGGGCGTCG................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
................................................................................................CGGTGCCGGCAATGGACA---GAGCG------------G---TGG...............................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
............................................AGGATAACCGCAGCGGTGGT---GGAAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------------A-CACAACAACA------ACAGCGGC........................................................................2011.001010000
...............................................................................................................................................................................................................................................................................................................................................AG-------------------------------------------------------CA--------------------------------A-CACAACAACA------ACAGCGGC........................................................................2311.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA------ACAGCGGCAGTAGCAAC...............................................................2211.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA------ACAGCGGCAGTAGCAACATAACA.........................................................2611.001000001
...........................................................................................................................................................................................................................................................................................................................................CAGTAG-------------------------------------------------------CA--------------------------------A-CACAACAACA------ACAGCGG.........................................................................2611.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAAAAAAGAAACCCATCGTTAA------G.............2611.001010000
.............................................................................................................................................................................................................................................................................................ACAGCAA-CAGCAACAGCAA----ACAGC..................................................................................................................................................................................................................2411.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATCGTTAA------GAACATCGAC....2111.001000010
.......................................................................................................GGCAATGGACA---GAGCG------------G---TGGC..............................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................AG-------------------------------------------------------CA--------------------------------A-CACAACAACA------ACAGCGGCAGTA....................................................................2711.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAACAAAAAAAGAAACC.............................2011.001010000
..........................................................................................................................................................................ATATCCA------------------------------------------------------------------------------------TC---AC-----ACTACTACAGCAAC.............................................................................................................................................................................................................................................2511.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------------A-CACAACAACA------ACAGCGGCAGT.....................................................................2311.001010000
.........................................................................................................................................................................................................................................................................................................AACAGCAA----ACAGCGACTAC---A---.....................................................................................................................................................................................................2011.001010000
.................................................................................................................A---GAGCG------------G---TGGCAGTTACGGGCG...................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..........................................CCAGGATAACCGCAGCGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..................................................ACCGCAGCGGTGGT---GGAAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
........................................................................CAACCAGTCCAATGGTCCGCTGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCATCGTTAA------GAACATCG......2011.001001000
................................................................................................................................................................................A------------------------------------------------------------------------------------TC---AC-----ACTACTACAGCAACAGCAA-CA.....................................................................................................................................................................................................................................2611.001010000
................................................................................................................................................................................A------------------------------------------------------------------------------------TC---AC-----ACTACTACAGCAACAGC..........................................................................................................................................................................................................................................2211.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................CA--------------------------------A-CACAACAACA------ACAGCGGC........................................................................2111.001010000
...............................................................................................................................................................................................................................................................................................................AA----ACAGCGACTAC---A---GCAAC................................................................................................................................................................................................1911.001010000
...........................................CAGGATAACCGCAGCGGTGGT---GG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
............................................................................................................................................................................................................................................................................................................................CTAC---A---GCAACAGTAG-------------------------------------------------------CA--------------------------------A-CACAA...........................................................................................2311.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAACAAAAAAAGAAAC..............................1911.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------------A-CACAACAACA------ACAGCGGCAGTAGC..................................................................2611.001010000
..............................................................................GTCCAATGGTCCGCTGCGCGGTGCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
...............................................................................................................................................................................................................................................................................................................AA----ACAGCGACTAC---A---GCAACAGTAG-------------------------------------------------------CA--------------------------------..................................................................................................2611.001010000
..................................................................................AATGGTCCGCTGCGCGGTGCCGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...............................................................................................................................................................................................................................................................................................................AA----ACAGCGACTAC---A---GCAACAGC.............................................................................................................................................................................................2211.001010000
.............................................................................................................................................................................................................................................................................................ACAGCAA-CAGCAACAGCAA----AC.....................................................................................................................................................................................................................2140.251000010
.............................................................................................................................................................................................................................................................................................ACAGCAA-CAGCAACAGCAA----A......................................................................................................................................................................................................................20110.091000010
..............................................GATAACCGCAGCGGTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................17150.071000100
.........................................................................................................................................................................................................................................................................................AGCAACAGCAA-CAGCAACAGC.............................................................................................................................................................................................................................21200.051010000
droBip1
CCTGGGAGGTG---GTGGCGG---T---GGATTTGGGCCACGCCAGGACAACCGCAGCGGTGGC---GGAAACAACCAGTCCAACGGTCCGCTGCGCGGTGCCGGCAATGGACA---GACCG------------GTCAAGGCAATTACGGGCGTCGCTAAA--AAACTAAAT--CCA------------------------------------------------------------------------------------TC---AC-----A---AACCAG-----------------AACACAAGAGC---A---AC---A---GCAGCAGCAA-------------------------------------CGGC---CACAGTAG---CA--------------------------------A-CATAACAACA------ACAGCGGCAGTAGCAACATA--------A-------ACAACAAAAAAAACCCATCGTTAA------GAACATCGACTTCTSizeHit CountTotal NormTotal
No Reads
dp5
TCTGGGCGG---------CGG---G---GGCTTCGGGCCACGCAACGACAACCGAAGCGGCGGG---GGTAGCAGTCAGTCCAACGGACCGCTGCGCGGTGCCGGCAACGGACA---GGCTGGTGGTGGTGGTGGCGGTGGCAACTACGGCCGTCGCTAAA--GCAG---GT--GTC---------------------------------------------------------------------------------------------------------------------------------------------------------GCAGTCG-------------------------------------------CCAGTGCAGAAACAAC-------------------AGA--------A--ACACCA---------AC---AA------------------------------AAACAACAACAACCCAACGTTTA------GAACATCGACTTCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................CGTCGCTAAA--GCAG---GT--GTC---------------------------------------------------------------------------------------------------------------------------------------------------------GC................................................................................................................................................................................................2112.0020200000000
...............................................................................................................................................................................................................................................................................................................................................................................................GTGCAGAAACAAC-------------------AGA--------A--ACACCA---------A...............................................................................2411.0010100000000
....................................................CGAAGCGGCGGG---GGTAGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
...................................................................................................................................................................GCAG---GT--GTC---------------------------------------------------------------------------------------------------------------------------------------------------------GCAGTCG-------------------------------------------CCAGTGCA........................................................................................................................................2411.0010010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................C---AA------------------------------AAACAACAACAACCCAACG........................2211.0010010000000
..........................................................................................GCTGCGCGGTGCCGGCAACG..............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........................................................GCGGG---GGTAGCAGTCAGTCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
..........................................................GGCGGG---GGTAGCAGTCAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..................................................................................................GTGCCGGCAACGGACA---GGC....................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..............................................GACAACCGAAGCGGCGGG---GGTAGCAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.........................................................................................CGCTGCGCGGTGCCGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
TCTGGGCGG---------CGG---G---GGCTTCGGGCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...............................................................................................................................................................................................................................................................................................................................................CG-------------------------------------------CCAGTGCAGAAACAAC-------------------AGA--------A--ACAC...........................................................................................2611.0010000100000
....................................................................................................GCCGGCAACGGACA---GGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACCCAACGTTTA------GAA...........2311.0010100000000
....GGCGG---------CGG---G---GGCTTCGGGCCACGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.......................................................................................................................................................CGTCGCTAAA--GCAG---GT--GTC---------------------------------------------------------------------------------------------------------------------------------------------------------G.................................................................................................................................................................................................2011.0010000001000
................................................................................................................................................................................C---------------------------------------------------------------------------------------------------------------------------------------------------------GCAGTCG-------------------------------------------CCAGTGCAGAAACAAC-------------------AGA--------..................................................................................................2711.0010100000000
..........................................................................................................................................................CGCTAAA--GCAG---GT--GTC---------------------------------------------------------------------------------------------------------------------------------------------------------GCAGTCG-------------------------------------------CC..............................................................................................................................................2511.0010100000000
.........................................GCAACGACAACCGAAGCGGCGGG---G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
................................................................................CCAACGGACCGCTGCGCGGTGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
..................................................................................................GTGCCGGCAACGGACA---GGCTGGTGGT.............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.........................................................................................................................GGTGGTGGTGGTGGCGGTGGC..............................................................................................................................................................................................................................................................................................................................................................................................21130.0810100000000
droPer2
TCTGGGCGG---------CGG---G---GGCTTCGGGCCACGCAACGACAACCGAAGCGGCGGG---GGTAGCAGTCAGTCCAACGGACCGCTGCGCGGTGCCGGCAACGGACA---GACTGGTGGTGGTGGTGGCGGTGGCAACTACGGCCGTCGCTAAA--GCAG---GT--GTC--------------------------------------------------------------------------------------------------GCCAGCCGC-------------------------------------------------------------------------------------------------CAGTGCAGAAACAAC-------------------AGA--------A--ACACCAACA------AC---AA------------------------------CAACAACAACAACCCAACGTTTA------GAACATCGACTTCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCCAACGTTTA------GAACATC.......2013.003300000
..............................................................................................................................................................................GTC--------------------------------------------------------------------------------------------------GCCAGCCGC-------------------------------------------------------------------------------------------------CAGTGCAGAAACAAC-------------------.............................................................................................................2711.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACCCAACGTTTA------GAACATC.......2711.001100000
............................................................................................................................GGTGGTGGTGGCGGTGGC..............................................................................................................................................................................................................................................................................................................................................................................................18200.051000001
droWil2
TCTTGGCGGCG---GCGGCGGTGGTGGAAGTTTTGGCCAACGCAACGATAATCGC---GGCAGT---GG---TAATCAATCCAATGGACCTCTACGGGGCTCCGGCAACGGACA---GAGCG---------GCGGAGGTGGCAACTATGGACGTCGCTAAA--AACC-ACATA-GTCCAAACAAAACAAAAAAAACATCAAACAAAGCAACATTAAAAAGCAG-----------------------------------------------------------------------------------------------CC---A---GCAGCAGTAGC--CAATCGCAACACCAGCAGGCCTGACATCGGTAATTGGCCGCAGC---AG---CA--------------------------------A-GAAATAAA---------T---AA------------------------------TAGCAACAGCAGCCCAACGTTTAA-----AAACATCGACATCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................ATGGACGTCGCTAAA--AACC-ACATA-GTC...........................................................................................................................................................................................................................................................................................................................................................2712.00200020
.............................................................................................................................................................................................................................AG-----------------------------------------------------------------------------------------------CC---A---GCAGCAGTAGC--CAATC...................................................................................................................................................................................2112.00200110
........................................CGCAACGATAATCGC---GGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
...........................................................................................................................................................................................................................................................................................................................................................................................GCAGC---AG---CA--------------------------------A-GAAATAAA---------T---...........................................................................1911.00100010
..........................................................................................................AACGGACA---GAGCG---------GCGGA....................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
...........................................................................................CTACGGGGCTCCGGCAACGGACA---G......................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------------------TAGCAACAGCAGCCCAACGTT......................2311.00100010
..................................................................................................................................................................................................................CATTAAAAAGCAG-----------------------------------------------------------------------------------------------CC---A---GCAGCAGTAGC--........................................................................................................................................................................................2711.00100010
...........................................................................................................................................................................................................................GCAG-----------------------------------------------------------------------------------------------CC---A---GCAGCAGTAGC--CAATCG..................................................................................................................................................................................2411.00101000
..........................................................................................................AACGGACA---GAGCG---------GCGGAGGTGGC..............................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.........................................................................................................................................................................................................................................................................................................................................................................TGACATCGGTAATTGGCCGCAGC---AG---C...................................................................................................................................2611.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAA---------T---AA------------------------------TAGCAACAGCAGCCCAAC.........................2611.00100010
..........................................CAACGATAATCGC---GGCAGT---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................GC---AG---CA--------------------------------A-GAAATAAA---------T---AA------------------------------TA.........................................2011.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................CGCAGC---AG---CA--------------------------------A-GAAATAAA---------T---A..........................................................................2111.00100010
.........................................................................................................................................................................................................................AAGCAG-----------------------------------------------------------------------------------------------CC---A---GCAGCAGTAGC--CAATCGC.................................................................................................................................................................................2711.00100010
.......................GTGGAAGTTTTGGCCAACGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
...............................................................................................................................................................................................................................................................................................................................................AGC--CAATCGCAACACCAGCAGGC....................................................................................................................................................................2311.00100010
.................................................................................................................................................................................................................................................................................................................................................................................GTAATTGGCCGCAGC---AG---CA--------------------------------A-GAAA............................................................................................2411.00100010
......................GGTGGAAGTTTTGGCCAACGCAACGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
....................................................................................................................................................................................................................................................................................................................................................................................ATTGGCCGCAGC---AG---CA--------------------------------A-GAAATAAA---------T---A..........................................................................2711.00100010
..............................................GATAATCGC---GGCAGT---GG---TA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
..........................................................................................................................................................................................................................AGCAG-----------------------------------------------------------------------------------------------CC---A---GCAGCAGTAGC--CAATCGC.................................................................................................................................................................................2611.00101000
..............................................................................................................................................AACTATGGACGTCGCTAAA--A........................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.......................................................................................................................................................................................................................................................................................................................................................................CCTGACATCGGTAATTGGC..................................................................................................................................................1911.00100010
......................................................................................................................................................................................................................................................................................................................................................................GCCTGACATCGGTAATTGGCCGC...............................................................................................................................................2311.00100010
.....................................................................................................................................................................................................................................................................................................................................................AATCGCAACACCAGCAGGCCT..................................................................................................................................................................2111.00100010
...........................................AACGATAATCGC---GGCAGT---GG---TA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
........................................................................................................................................................................................................................................................................................................................................................................CTGACATCGGTAATTGGCC.................................................................................................................................................1911.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................GC---AG---CA--------------------------------A-GAAATAAA---------T---AA------------------------------TAGC.......................................2211.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................TTGGCCGCAGC---AG---CA--------------------------------A-GAAATAA.........................................................................................2311.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCAACAGCAGCCCAACG........................1911.00100010
............................................................................................................................................................................................................................CAG-----------------------------------------------------------------------------------------------CC---A---GCAGCAGTAGC--CA......................................................................................................................................................................................1911.00100010
..........................................................................................................................................................................................CAAAAAAAACATCAAACAAAGC............................................................................................................................................................................................................................................................................................................................2211.00100010
...........................................AACGATAATCGC---GGCAGT---G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
............................................................................................................................................................................................................................................................................................................................................AGTAGC--CAATCGCAACACCAG.........................................................................................................................................................................2111.00101000
......................................................................................GACCTCTACGGGGCTCCGGCAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
.................................................................................................................................................................................................................ACATTAAAAAGCAG-----------------------------------------------------------------------------------------------CC---A---GCAGCA...............................................................................................................................................................................................2311.00100100
.................................................................................................................................................................................................................ACATTAAAAAGCAG-----------------------------------------------------------------------------------------------CC---A---GCAGC................................................................................................................................................................................................2211.00100010
........................................................................................................................................................................................................................................................................................................................................................................CTGACATCGGTAATTGGCCGCAGC---A........................................................................................................................................2511.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------T---AA------------------------------TAGCAACAGCAGCCC............................2011.00100010
........................................................................................................................................GGTGGCAACTATGGACGTCG................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
................................................................................................................................................................................................................................................................................................................................................................CAGCAGGCCTGACATCGGTAATTG....................................................................................................................................................2411.00100010
....GGCGGCG---GCGGCGGTGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05101000
droVir3
----------------GGCGC---T---AGTTTTGGACAGCGCAATGACAATCGCAGCAGCGGT---GGTGGTAATCAATCCAACGGACCACTGCGCGGTCCTGGCAATGGACA---GACCG------------GTGGCGGTAATTATGGACGCCGTTAAA--ATGCA------------------------------------------------------G--------AGCGT-------AATGAGAACCG------GTG---GC-----CACTCATT---------------------------------------------------------------------------------------GG--AT-GGCCGCCAGT--------------------------------------------GCAAAAA---------T---AA------------------------------CAACAGCAACAACCCAACGTCA---------GCATCGATTTCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................CACTCATT---------------------------------------------------------------------------------------GG--AT-GGCCGCC..............................................................................................................................................1918.008002000000001000000000000000000001200000000000000000000000001010
..........................................................................................................................................................................................................................................GT-------AATGAGAACCG------GTG---GC-----...........................................................................................................................................................................................................................................................1814.004000000000100010001000000000000000000100000000000000000000000000
.........................................GCAATGACAATCGCAGCAGCGGT---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003000000000001020000000000000000000000000000000000000000000000000
.......................................................................................................................................................................A------------------------------------------------------G--------AGCGT-------AATGAGAACCG------GTG---GC-----...........................................................................................................................................................................................................................................................2312.002000100000100000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................GCA------------------------------------------------------G--------AGCGT-------AATGAGAACCG------GTG---GC-----...........................................................................................................................................................................................................................................................2512.002000100000000000100000000000000000000000000000000000000000000000
.........................................GCAATGACAATCGCAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002001000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................ATGCA------------------------------------------------------G--------AGCGT-------AATGAGAACCG------GTG---GC-----...........................................................................................................................................................................................................................................................2712.002000100000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................C-----CACTCATT---------------------------------------------------------------------------------------GG--AT-GGCCGCC..............................................................................................................................................2012.002000000000000000000000000000000000000000100000000000000000001000
....................................................................................................................................................................................................................................................ATGAGAACCG------GTG---GC-----CACT.......................................................................................................................................................................................................................................................1912.002001000000000000000000000000000000001000000000000000000000000000
.................................................................................................................................................................................................................................................................................CACTCATT---------------------------------------------------------------------------------------GG--AT-GGCCGCCAGT--------------------------------------------...............................................................................................2212.002000000000000000000001000000000000000100000000000000000000000000
..............................TTTTGGACAGCGCAATGACAATCGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TGCA------------------------------------------------------G--------AGCGT-------AATGAGAACCG------GTG---GC-----...........................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA---------T---AA------------------------------CAACAGCAACAACCCA...........................2311.001000000000000000001000000000000000000000000000000000000000000000
.........................................GCAATGACAATCGCAGCAGCGGT---GGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................G------------GTGGCGGTAATTATGGAC....................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000001000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................GT--------------------------------------------GCAAAAA---------T---AA------------------------------CAACAGC....................................1911.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................CA------------------------------------------------------G--------AGCGT-------AATGAGAACCG------GTG---..................................................................................................................................................................................................................................................................2211.001000000000001000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................ATT---------------------------------------------------------------------------------------GG--AT-GGCCGCCAGT--------------------------------------------GCAA...........................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
..................................................ATCGCAGCAGCGGT---GGTGGTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................CTCATT---------------------------------------------------------------------------------------GG--AT-GGCCGCCAGT--------------------------------------------GCA............................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................GGCAATGGACA---GACCG------------GC....................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCCAACGTCA---------GCATCGATT...2111.001000000000000000000000000000000000000000000000000000000000000010
............................................ATGACAATCGCAGCAGCGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
...........................................AATGACAATCGCAGCAGCGGT---GGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000100000000000000000000000000000000000000000000000000000
..........................................CAATGACAATCGCAGCAGCGGT---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................TCATT---------------------------------------------------------------------------------------GG--AT-GGCCGCCAGT--------------------------------------------...............................................................................................1911.001000000000000000000000000000000000000010000000000000000000000000
.........................................................................AATCAATCCAACGGACCACTGCGCGGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................GGACA---GACCG------------GTGGCGGTAATT..........................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.................................TGGACAGCGCAATGACAATCGCAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................GTTAAA--ATGCA------------------------------------------------------G--------AGCGT-------AATGAGAACC...............................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................CA------------------------------------------------------G--------AGCGT-------AATGAGAACCG------GTG---GC-----CAC........................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................AATCAATCCAACGGACCACTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................CACTCATT---------------------------------------------------------------------------------------GG--AT-GGCCGCCA.............................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................ATTATGGACGCCGTTAAA--.........................................................................................................................................................................................................................................................................................................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
...........................................................................................................................................................GTTAAA--ATGCA------------------------------------------------------G--------AGCGT-------AATGA....................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................GGCAATGGACA---GACCG------------GTGGCGGTA.............................................................................................................................................................................................................................................................................................................................................................................................2511.001100000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------------------CAACAGCAACAACCCAACGTC......................2311.001000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................AGCGT-------AATGAGAACCG------GTG---GC-----...........................................................................................................................................................................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
....................................................................................................CCTGGCAATGGACA---GACCG------------GTGGCGGTA.............................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................AATCAATCCAACGGACCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000000000000000000000000000000000000000000000000000000000000
.........................................................................................................CAATGGACA---GACCG------------GTGGC.................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................CCACTGCGCGGTCCTGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000100000000000000000000000000000
......................................AGCGCAATGACAATCGCAGCAGCGGT---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAACCCAACGTC......................2111.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAA---------T---AA------------------------------CAACAGCAACA................................1990.111000000000000000000000000001000000000000000000000000000000000000
droMoj3
CATGGGCGGCAATAATGGTGC---T---AGCTTTGGACAGCGCAATGACAATCGCAGCGGCGGT---GG---CAATCAGTCCAACGGACCGCTGCGCGGTGCCGGCAATGGACA---AACCGGTAGCG---GCGGTAGCGGCAATTATGGACGCCGTTAAA--ATGCA------------------------------------------------------G--------AGTAG-------AAT-----CTGCACTAGTTG---GC-----CACA--------------------------------------------------G--GCAGT---------------------------------CG--AT-GGCCGACAC---------ATC-------------------AAA--------ACTATACCAACAAC---AAC---AG------------------------------CAACAACAACAACCCAACGTCA---------GCATCGATTTCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................AGCTTTGGACAGCGCAATGACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACCCAACGTCA---------GCAT........2011.001000001
...........................................................................................................................................................................................................................................................................C-----CACA--------------------------------------------------G--GCAGT---------------------------------CG--AT-GGCC.................................................................................................................................................1911.001100000
..............................................................................................................................................................................................................................................................CACTAGTTG---GC-----CACA--------------------------------------------------G--GCAGT---------------------------------............................................................................................................................................................2111.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACCCAACGTCA---------GC..........2111.001100000
......................................................................................................................ACCGGTAGCG---GCGGTAGCG................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........................................AATGACAATCGCAGCGGCGGT---GG---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
................................................................................CCAACGGACCGCTGCGCGGTGCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..................................................................................................................................................................................................................................................................AGTTG---GC-----CACA--------------------------------------------------G--GCAGT---------------------------------CG--AT-GGCC.................................................................................................................................................2511.001000010
.............................................................................................................................................................................................................................................................GCACTAGTTG---GC-----CACA--------------------------------------------------G--GCAG..............................................................................................................................................................................................2111.001100000
.........................................................................................................................GGTAGCG---GCGGTAGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.........................................GCAATGACAATCGCAGCGGCGGT---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
............................................................................CAGTCCAACGGACCGCTGCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.......................................................................................................................................................................................................................................AGTAG-------AAT-----CTGCACTAGTTG---GC-----...........................................................................................................................................................................................................................................................2211.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAACAAC---AAC---AG------------------------------CAACAAC....................................21200.051000010
droGri2
TATGGGCGGCAATGGAGGCGC---C---AGTTTTGGTCAGCGGAACGATAATCGCAGCAGCGGT---GGCGGCAATCAATCCAATGGACCGCTGCGCGGTGCGGGCAACGGACA---GAGCGGCGGTGGTGGCGGCGGCGGCAATTATGGTCGCCGTTAAT--CA---------------------------------------------------------GCGGGCGGCAGTGTAACAAAAAATAAAAACCGC-----CTG---GC-----CTGACATT---------------------------------------------------------------------------------------GG--ACGGGCCGCCGG---------AAC-------------------AGA--------AATATAACAAGC------A----AA------------------------------TAGCAGCAACAGCCCAACGTCA-------GAGCATCGATTTCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................TTGGTCAGCGGAACGATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCCCAACGTCA-------GAGCA.........1911.00110
.......................................GCGGAACGATAATCGCAGCAGCGGT---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110
...................................................TCGCAGCAGCGGT---GGCGGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
.......................................................................................ACCGCTGCGCGGTGCGGGCAACGG.............................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101
.......................................................................................................................GCGGCGGTGGTGGCGGCGGCG................................................................................................................................................................................................................................................................................................................................................................................................2150.20110
........................................................................................................................CGGCGGTGGTGGCGGCGGCG................................................................................................................................................................................................................................................................................................................................................................................................2060.17101

Generated: 05/18/2015 at 12:28 PM