ID:

dsi_11765

 Coordinate:

3r:20236653-20236888 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.1 -27.0 -27.0

Flybase annnotation

five_prime_UTR [3r_20236612_20236652_+]; exon [3r_20236612_20236652_+]; five_prime_UTR [3r_20236889_20236985_+]; exon [3r_20236889_20237045_+]; intron [3r_20236652_20236888_+]

No Repeatable elements found

mature
  1. 2l:21612336-21612350 -
  2. dsi_11765  3r:20236743-20236757 +
star

Sense Strand Reads

---------#########################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTTCAGTTCAGTTGGAACAGAGCGCTCAGTTGGTGAGGACGTGTTCGCGGTCTACAGAACAATATATTAATAAAGTATCTAAAATATCTAGAATGTATTAAAGTTTTTTGAAATCGTATACAAATTAAATGCACAATATTTTTAGGATTTTTTCTAATCGTTTATTGCGTAAAATTTTAGTATTCAGTTTTAATGAAATACCAATTTATAACCAAGTGTCTATATATCCCAATCTCACCTATACACTCTTGATATTCTCTCTTCCCTCCCTGGAACTGGAAATCAGCTCCTAACAAATCACTCTTGAGTGACGAACAGAGTGTTTTTGGAACGAAG
**************************************************....(((......(((((.....)))))....((((((.(((.(((((.....(((.(((((((...(((((((((..(((((....((..((((((....))))))..))....)))))..)))))..))))...))))))).)))..................(((.................)))..))))).))).)))))).....((((......)))))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M023
head
 M024
male body		 GSM343915
embryo
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M053
female body
 SRR553487
NRT_0-2 hours eggs
........................CTCAGTTGGTGAGGACGTGTT................................................................................................................................................................................................................................................................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0
.......................GCTCAGTTGGTGAGGACG....................................................................................................................................................................................................................................................................................................... 18 0 1 2.00 2 0 1 1 0 0 0 0 0 0
........................................GTGTTCGCGGTCTACAGAAC.................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.........................TCAGTTGGTGAGGACGTG..................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................TCAGTTGGTGAGGACGTGT.................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............AACAGAGCGCTCAGTTGGTG............................................................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
....................AGCGCTCAGTTGGTGAGGACG....................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...................GAGCGCTCAGTTGGTGAGGACG....................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0
......................CGCTCAGTTGGTGAGGACGTGTTCGCG............................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..........................................GTTCGCGGTCTACATAA..................................................................................................................................................................................................................................................................................... 17 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................TCAGTTGGTGAGGACGTGTT................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........AGTTGGAACAGAGCGCTCAGTTGG............................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...................GAGCGCTCAGTTGGTGAG........................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.......................GCTCAGTTGGTGAGGACGTGT.................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................GCTCAGTTGGTGAGGACGTGTT................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................AGAGCGCCCAGTTGGTGAGGACG....................................................................................................................................................................................................................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0
...................GAGCGCTCAGTTGGTGAGGA......................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0
............................................................................................................................................TTTAGGATTTTTTCT..................................................................................................................................................................................... 15 0 2 0.50 1 0 0 0 0 0 1 0 0 0
................................................................................................ATTAAAGTTGTTCGAAGTCGT........................................................................................................................................................................................................................... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................GGACTGTAAATCCGCTCCT............................................. 19 3 11 0.18 2 0 0 0 0 0 0 0 2 0
.............................................................................................................................................TTAGGACTTTTACTAATC................................................................................................................................................................................. 18 2 8 0.13 1 0 0 0 0 0 1 0 0 0
.........AGTTGCAACAGAGCTCT...................................................................................................................................................................................................................................................................................................................... 17 2 17 0.06 1 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................TCGTTTATGGCGTAGAA.................................................................................................................................................................. 17 2 19 0.05 1 0 0 0 0 0 0 1 0 0
................................................................................................................................................................................................................................................................................................CAAAACAGATCACTCTTGA............................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1
................................ATGATGACGTGATCGCGGT............................................................................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................GAACAGCGTGTTGTTGG....... 17 2 20 0.05 1 0 0 0 0 0 0 1 0 0
..........................................................................................................................................................................................................................................................................................................................TCAGCGTGTTTTTGGAACT... 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

AAAGTCAAGTCAACCTTGTCTCGCGAGTCAACCACTCCTGCACAAGCGCCAGATGTCTTGTTATATAATTATTTCATAGATTTTATAGATCTTACATAATTTCAAAAAACTTTAGCATATGTTTAATTTACGTGTTATAAAAATCCTAAAAAAGATTAGCAAATAACGCATTTTAAAATCATAAGTCAAAATTACTTTATGGTTAAATATTGGTTCACAGATATATAGGGTTAGAGTGGATATGTGAGAACTATAAGAGAGAAGGGAGGGACCTTGACCTTTAGTCGAGGATTGTTTAGTGAGAACTCACTGCTTGTCTCACAAAAACCTTGCTTC
**************************************************....(((......(((((.....)))))....((((((.(((.(((((.....(((.(((((((...(((((((((..(((((....((..((((((....))))))..))....)))))..)))))..))))...))))))).)))..................(((.................)))..))))).))).)))))).....((((......)))))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 M025
embryo
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
..................................................................................................................................................................................................................TGGTTCGTAGATATATAGGGT......................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
.........................................................................TCAGAGAGTTTATAGGTCTTACAT............................................................................................................................................................................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
.................................................CAGCTGTCTTGTCATATA............................................................................................................................................................................................................................................................................. 18 2 4 0.25 1 0 0 1 0 0 0
.....................................................................................................................................................................................................................................................GAGAACGATAAAAGAGAAG........................................................................ 19 2 9 0.11 1 0 0 0 0 1 0
..................................................................................................................................................................................................................................................................................................................TCACGGCCAGTCTCACAAA........... 19 3 20 0.10 2 0 0 0 2 0 0
....................................................................................................TCCAAAAGACGTTAGCATA......................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0
..........................................................................................................................................................................................................................AGATATAAAGTGCTAGAGT................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:20236603-20236938 + dsi_11765 TTTCAG---------TTCAGTTGGAACAGAGCGCTCAGTTGGTGAGGACGTGTTCGCGGTCTAC-AGAA----------------CAATA---------TAT---TAA-TAAAGTA-TCTA-----------------------------------------------------------AAA----------------------------------------TATC-TAGA-----ATGTATTAAAGTTTTTTGAAATCGTATACA------A---------------------------------------------------------------------------A------------------------------------------------TTAAATGCACAA---------------------------------TATT--TTTAGGATTTTTTCTAATCGTTTATTGCGTAAA-----------------------------ATTTTAGTAT--------------------------------TCAGT---------------------------TTTAATG------AAATACCAATTTATAACCAAGT-------------------GTCTATATAT---------------------------CCCAA------------------TCTCACCTA----TACACTCTT-GATATTCTCTCTT------------------CCCTCCCTGGAA---------------C----TG----GAAATCAG-------------------------------CTCCT-----AAC-AAATCACTCTT-GAGTGACGAACAGAGTGTTTTTG--GAACGAAG
droSec2 scaffold_0:21068327-21068662 + TTTCAG---------TTCAGTTGGAACAGAGCGCTCAGTTGGTGAGGACGTGTTCGCGGTCTCC-AGAA--G--------------AATA---------TAT---TAA-TAAAGTA-TCTA-----------------------------------------------------------AAA----------------------------------------TATC-TAGA-----ATGTATTAAAGTTTTTTGAATTCGTATACA------A---------------------------------------------------------------------------A------------------------------------------------TAAAATGCACAA---------------------------------TATT--TGTAGGATTTTTTCTAATCGTTTATCGCGTAAA-----------------------------ATTTTAGTTT--------------------------------CCGGT---------------------------TTTAACA------AAATACCAATTTATAACCAAGA-------------------ATCTATATAT---------------------------CCCCA------------------TCTCACTTG----TACACTCTT-GATATTCTCTCTT------------------CCCTCCCTGGAA---------------C----TG----GAAATCAG-------------------------------CTCCT-----AAC-AAATCACTCTT-GAGTGACGAACGGAGTGTTTTTG--GAACGAAG
dm3 chr3R:20720457-20720786 + TTTCAG---------TTCAGTTGGAACAGAGCGCTCAGTTGGTGAGGACGTGTTCGCGGAGGTA-AGTG--ACT----ACCGAA-GAATA---------TTT---TAA-TAAAGCA-TCTA-----------------------------------------------------------AAA----------------------------------------TATCATATA-AAATATGTATTAAAGTTTTTTGAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------AA---------------------------------TATG--TGTTGGATTTTTCCTAATTGTTTATTGTGTAAA-----------------------------ATTTTAGTTT--------------------------------TCAGT---------------------------TTTAGCC------AAATACCAATTTATAATCAAGT-------------------ATCTCTACAT---------------------------CTCAA------------------TCTCACTTT----TACACTCTT-GATATTCTCTCTT------------------CCCTCCCTGGAA---------------C----TG----AAAATCAG-------------------------------CTCCT-----AAC-AAACCACTCTT-GAGTTACGAACAGAGTGTTTTCG--GCCCAAAG
droEre2 scaffold_4820:7333013-7333351 - TTTCAG---------TTCAGTTGGAACAGCGCGCTCAGTTGGTGAGGACGTGTTCGCGGAGGTA-AGTA--TCT----ACAGAA-GAATA---------TTTTTTTAG-TTAGGTA-GCCA-----------------------------------------------------------AAA----------------------------------------TATC-TATA-----ATGTATTAAAGTTCTTTTAGAGCGTAT-CA------A---------------------------------------------------------------------------A------------------------------------------------TTATAT--ATAC---------------------------------TATT--TATAGGATTT-TTTTAACATTTACGGGCGCACA-----------------------------ATTTTTGTTT--------------------------------TCAGT---------------------------TTTTACC------AAATATCAATGTACAACCAAGC-------------------CTCTATATAT---------------------------CTCTA------------------TCTCTCTTA----TCCCCTCTT-TATATTCTCTCTT------------------CCCTCCC-------------------------TG----GAAAACAG-------------------------------CTCCT-----AACTAAACCACTCTT-CAGTGACGAACAGAGTGTTTTTG--GGCCGAAG
droYak3 3R:25774983-25775326 - TTTCAG---------TTCAGTTGGAAACGCGCGCTCAGTTGGTGAGGACGTGTTCGCGGAGGTA-AGTCAGTCT----GCAGAA-AAATA---------TTT---TAG-CCAAGTA-ACCA-----------------------------------------------------------AAA----------------------------------------TATC-TATA-----ATGTATTAAAGTTCTTTAAAAACGTATAAA------G---------------------------------------------------------------------------------------------------------------------------AATGTATGAATAA---------------------------------TAAT--TATAGAATT-TTTCTAATTTGAAAAGGCGTACA-----------------------------GTCCTAGTAT--------------------------------TCAGT---------------------------TTCTACC------AAATATGAATGTATAACCAAGT-------------------CTCTATACAT---------------------------CTC-A------------------TCTCTCTTATATTCATATTCTT-CATATTCTCTCTT------------------TCTTCCC-------------------------TG----GAAGTCAG-------------------------------CTCCT-----AACTAAGCCACTCTT-GAGTCACGAAGAGAGCGTTTCCG--GCCCGAAG
droEug1 scf7180000409881:453914-454237 + TTTCAG---------TTCAGTTGGAACAGCGCGCTCAGTTGGTTTAGACGTGTTCACGGAGGTT-AGTG--GTGTTAA----AT-AA-------------ATTTTTGG----TGA------------------------------------------------------------------------------------------TCGCTTAAGAAGT-----TACC-TATG-----AAATATTAAAGTTGTA----------GACA------A---------------------------------------------------------------------------ATATTCTGAAAA--------------TTACTGCAAA------------AA--------------------------------------------TG--TAT------------CTTATTGTAA----------AGTTTTTAAATTTTTATTTTAAAAGT---------TTCT--------------------------------TCAGT---------------------------TTTAACC------AAATACCGTTA-----TTATGT-------------------ATTGGTATATA---------------------AAAACCTC----TCTGTTATGTCTTCTCTCTCAT-------------------------TTCTA------------------CTCTGCC-------------------------TG----GAAAATAT-------------------------------CTCTT-----TTA-AA-----------ATTTTCTAACATATTTTTAAAA--TATCAAAG
droBia1 scf7180000302402:4512200-4512491 + TTAATG---------------------------------------------------------------------------------------------------------AAATA-TCCAATTT----AATCTCTG------GCTTACAAAAATATATTTT-TAAGCCAAAGTTTTA--AAA----------------------------------------AATA---------------------------------ATATAAA------T-------AATAAAA--------------CAAGTT------------------------G----------------CT----------------------------------------------------------------------TTAAAATAAAT------A-----------------TTTTTTTTAATTGTAA----------TACTTCCAAAACTTTAATAAAAGAGT---------GTCT---------------------------------TGGC---------------------------TTCAGCC------ACATTCTAGCT-----CTCTAT-------------------TTCAACATGGT----------------------AAATCCC----TT--------------TATAAACCA----GTCTCTGC---CTGTTCTCTCCC------------------CTCTCAC-------------------------TG----GAAATCAG-------------------------------CTCTT-----ACCCAAGCCACTCTT-GAGCCACGAAGAGAGTTT---AG--GCTCGAAG
droTak1 scf7180000415310:398732-399002 - TTTCAG---------TTCAGTTGGAACAGCGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTT-AGAA--GTGT--------------G---------CAT---ATA-------------------------------------------------------------------------------------------------TCGCTTAGAAA-------GATC-TGAA-----AAATATTAAAGTTCTTTAAAAAAATATAGA------A---------------------------------------------------------------------------------------------------------------------------AA--------------------------------------------TG--TATCTTAAGTTTTATCAAATAATTTCTGGCCCATAAAATTACAAAAATTTAATTAAAAAGT---------GTCT--------------------------------TAAAT---------------------------TTTT-----------------------CATCGAGT----------TACAATTGTATCTTTATATCAAACCTTCTCC--TCGCT---------CTTCTC----------------TCTCCC----------------------TCTC---T------------------CTCTCTC-------------------------TG----GAA-----------------------------------------------------------------------------------------------
droEle1 scf7180000491212:14619-14705 + TTTAAG---------TCCAGTTGGAACAGTGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTT-AGAA--A-------------GAATA---------TAT---TTA-AAA---------------------------------------------------------------------------------------------------------------------------------ATTTAAGATCTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779488:65867-66092 - TTTCAG---------TTCAGTTGGAACAGCGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTT-AGAA--AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTTCTTTAAATTATCTT----------ACATTAAAATATAT--------------AAAAATA-------ACATATCATTTAAAATGCTTTAAATATTAGCAGTT---------T------------------------TTTGGGCAAAGC-----------------------GTTAAAACTTAA------AATGCG---AAT-------------------------------------------------TACAAAAGT---------GTTT--------------------------------TCAGC---------------------------TTTTA-A------AAATACCGTTG--------------------------------------------------------TTTGG------TT-----------------------------------------TT-GTCATTTTCTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454055:617469-617812 + TTTCAG---------TTCAGTTGGAACAGCGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTT-AGCA--GTGTTAC----AA-TAATT---TTATTAATTTTT----TTATGT----------GT---------------------A--------------AAAAAT---------------------------------------------------------AGTT-GAAG-------------T-----------------------------------------------------------------------------------GCTGAACAGATAAACAAAA---------A------------------------TTATAGTGGCTG-----------------------TTTAAAATAAAT------ATTACT---ACT-------------------------------------------------ATTAAAAGT---------TTTTCTGATTTTCA------------TAAATATGTTTTAGTTTTTTCTAACAAAGTT-----------------------------TTA---ATTCTGGTT----------------------------AGT---------TTTTCTCTCTACACAAACCAC----TC--------------TCTAAATTA----TTCTCTCTT-TGTATTTTCTC-------------------------TC-------------------------TA----TAAACCAG-------------------------------CTCTT-----ATCCAAGCCTCTCTT-TAGCCACGAACAGAGTAC----AAGGCCCAGAG
droKik1 scf7180000302461:2279814-2280142 - TTTCTG---------ATCAGTTGGAACGGCGCGCTCAGTTGGTGTAGACGTGTTCGCGGAGGTT-GGTT--TGG----ACATCA-CAAAA---------TTC--TTGT-TTAATTA-AAAA-----------------------------------------------------------AAATAGCTAACAGAAATTAGAATTAACTTTTA-----------AACC-TATA-AAGTGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTATTTAAAGATGAAATATATAA------AA---TATGTGTTT------------CCTTGCAA-------------------------------AATGT---------A-AT--------------------------------TCTGC---------------------------TTTCCTT------TAATATT------AAATTTAGG-------------------TTTTTTTTGT---------------------------TTTTCTCTC--------------TCTATACCA----TTCTCTTT---------TCGTTT------------------CCC---CTGTTC--------------T-----CC----AACCACAG-------------------------------CTCTT-----CCTAAAACCACTCTT-GAGCCACGAACAGCGTGT----GAGG--CAGAG
droAna3 scaffold_13340:18929117-18929450 - TTGCGG---------ATCAGTTGGAAGACTGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTA-AGAA--GTGTTAC----CAAGAACCCTTATTGTATA----------------------------ATTCTGC-CAAAC------------TTACT-TT-AAAAACATGCGATTACT-------------------------------A-----------AGCC-------------------------------------------------------------------------------------------------TTCAATATTTATTTAATTTTAGTAACT---------T------------------------TATAATCAAGTTAATTAATG----------------------TTTAG------AAAGAT----ATTAC----------------------------------------------CTCATAAGT---------TT-------------------------------GTTTAAG---------------------------------CCATCTATAAATAC------------------------------------------------------------------------CCC--------------------TCTTTCTTC----TTTTTTTTT-TGCCCTCTCTCTCTATTTTAGACTC------TCCTCTCTGCT---------------ACCTGTTG----GAAGTCAG-------------------------------C--------------AACCACTCTTTGAGCCACGAACAGCGTGT----GAAG--AGCAG
droBip1 scf7180000395652:247761-248077 + TTGCGG---------ATCAGTTGGAAGACTGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTA-AGAA--GTTTTAA----AA-AAATA---------TTCTTT-AG---------------------ATTCTAT-TAAGC------------TATCTTTT-TAAATCAAATTAATA--ATA----------------------------------------AATC-TAAA-----------------------------------------------------------------------------------------------AAGAGGTATTACATTTTATTACCT---------T------------------------TAAAAAAAAAG-AATTTATG----------------------AATAT------AAAGAT----ATTAC----------------------------------------------CTTAAAAGT---------T--------------------------------GTTTAAG---------------------------------CCATCTACGAATAA-------------------------------------------CT---------------------------CTCAT------------------TCTTCTTTT----GGCCC----------TCTCTCT--ATTTTAGCCTC------TCCTCTCTGCT---------------ACCTGTTG----GAAGTCAG-------------------------------C--------------AACCACTCTT-GAGCCACGAACAGCGTGT----GA-------AG
dp5 2:10032363-10032714 - dps_451 CCACAG--------TTTCAGTTGGAAGATCGCGCTCAGTTGGTTTGGACGTATCCGCGGAGGTT-AGCG--GTATTCTAT--A----------TAAGTGATTTTTTT------------------------------------CTTGTT--------------AAAAATATA-------------------------------------------------------------------------------------------TATATATA---------------------------------------------------------------------------------TTATGATATAAAATCAAAGAATATTAATA----------------------------------------------TAATAATTAAT---------------------------------A----------GGTTGTTAAATTTGTATTAAT--------------------AATGTTTGTTCCAAGTGGTT-----------------TTTTTATGAAAGTGATTTCAGAATA------------------------CTTATGGTA--GCTTCCGC-----------------------------------TCTCTGC------CTCTA------------------TCTCTC----------------------TCTCTCTT------------------TCCCTGTTAGT---------------TCCAGTGA----GAGCACAGCCAACTACCACTTTTGGAACATTT----------G-----TTTTTGAGCCGCTCTT-GAACTACGGACAGCGTGT----GAGG--CATAG
droPer2 scaffold_0:10449599-10449938 + GCACAG--------TTTCAGTTGGAAGATCGCGCTCAGTTGGTTTGGACGTATCCGCGGAGGTT-AGCG--GTATTCTAT--A----------CAAGTGATTTTT----TTT-------------------------------CTTGTT--------------AAAAATATA-------------------------------------------------------------------------------------------TATATATATAT------------------------------------------------------------------------------------------ATCAAAGAATATTAATA----------------------------------------------TAATAATTAAT---------------------------------A----------TGTTGTTAAATTTGTACTGTT--------------------CATGTGTGTTCCAAGTGGTT-----------------TTTTTATGAAAGTGATTTCGGAATA------------------------CTTATGGTA--GCTTCCGC-----------------------------------TCTCCGC------CTC----------------------TCTC----------------------TCTCTCTT------------------TCCTTGTTAGT---------------TCCAGTGA----GAGCACAGCCAACTACCACTTTTGGAACATTT----------G-----TTTTTGAGCCGCTCTT-GAACTACGGACAGCGTGT----GAGG--AATAG
droWil2 scf2_1100000004943:12702614-12702925 - TT-------------TTCAGTTGGAATAAGCCACTCAGTTGGATTGGACGTGTTCACGGAAGAT-CAAA--GTT----------------------ATTTACTTTTGG----TTA----------GTAA------------AGTTT------------T-TTAAAAAAAATG----------------------------------------------CA-------------------------------------------AATATATA--T-------AATTAAAAATCTCTAAAATAGTTAAATACT--------------------------------------------------------------------------------------------------------------TTAACATAATTATCATT----------CT-------------------------------------------------TTTATAAAT---------TACTGTAATATTAAA--GAA---C--TAAATCTATTTTAGT---------------------------TT-GCCA------GAATAATGATTTATTC---------------------------------------------------TCTGC-----TCTCTC------------------TCTCTCTTC----TTCTCTATC-AGTATTTGGTC----------------ACTTGGCTCTC-----T-C-----------------TC-------GACAG-------------------------------CTCTTGCTCTCTGTGAGCCACTCTT-TAAACTT--------------------------
droVir3 scaffold_12855:2455081-2455447 + CTT--------------CAGTTGGAATTGTGCGCTCAATTGGTTTAGACGTGTGCACGGTTATT-ATTA--TA-----------------------TTTTTTTTT----TGGTGT----------GTTG------------CATTT------------T-TT-AAAAACATGACATTACT-----------------------------------------------------------------------------------------------------AATATAA--------------TAAAATA-------AATATTAATTTAA--------------------------------------------------------------------AA--------------------------------------------TG--CAT-----------TTTG------ATAAGTGCATA-----------------------------GTTTT----------GAATATTCGAATAAAT------CTATTCGAAT-----ATATGAATTATATTTAAAGATT------------------------CTTAT-ACA--GCT--CGC-----------------------------------TCTCTCC------CAA----TCTG------------TCAATCTTC----CTCTCTTCCTTGCTTTCTCTC----------------TCTTGGCTCAC-----AACTCAACACTCATGCCAGTGT---TGTGCACTGTTTACTTCCA--------------GCCACTGCG---A-GTTCTTTGAGCCGCTCTT-CAACGGCGTACAGCGTGT----GAGG--CATAG
droMoj3 scaffold_6540:11666120-11666472 + TACCAGCAACAA--CTTCAGTTGGAATTCTGCGCTCGCTTGGACTAGACGTGTTTGCGGCTGATTCGCA--CCT----AAAAAT-AA---------ATAAATATTTGCTTGGTGCAT--------TTAA------------ATTTT------------A-GTAAGAAGTGTG----------------------------------------------CAAATAATAGTA-GAAT-------------T--------------------------------AATA---------------------------------------------------AATAAATAA----------------------------------TGTAAT------------AT--------------------------------------------T------ATAAA--------------------------------------ATATATTTAAGAAGTGCAATTGCTGTT------GAAAATTCCAAAT-------------------------------------------AAA------------------------ATTAAAACA--GCTAACGCGTTAT------CTCTGTATGT---------------------------TTCTC--CCTCTCACAGCTCCTATCTCAT--------------------------------------------------------------------------TCCAGTGCTCTTGTGCACTGTTTACTTCCA--------------GCCAGTGTT--TG-GTTCTTTGAGCCGCTCTT-GAACGGCGTACAGAGTGT----GAGG--CATAG
droGri2 scaffold_14624:2485469-2485826 - GGCAAC----TAGTTGTCAGTTGGAATTGTGCGCTCAATTGGTTAAGACGTGTCGACGGATAATTAACG--GCT----GTTGAG-TT---------GTATTTTTTTTGTTGGTGT----------GT---------------------T--------------AAAGATATG----------------------------------------------C------------A-----AAATA------------------ATAA----------ACACTATTATAATT--------------TAAATTAGTTTATCAATATA------------------------------------------------------------------------------------------------------ATTTAAAT------A----TG--TAT-----------TTCAA------------------------------------T--------------------AATATTAATTCCAAGTGCAC-----------------T---TAAAAATTAAAT-GTGAA------------------------ATGTTCTTCAGAAA-------------------CTTT--------------TTTC--TCT----------CTCTCTCTC--------------TCTCTGTCT----CTCTCTAT------------------TTGTGACTCTCTCTTTGCTCAC-----AACTCAACTCAC----CT---------------------TTCCA--------------GTCGCAGCA---A-GTTCTTTGAGCCGCTCTTTGAACGGCGTACAGCGTGT----GAGG--CATAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTTCAG---------TTCAGTTGGAACAGAGCGCTCAGTTGGTGAGGACGTGTTCGCGGTCTAC-AGAA----------------CAATA---------TAT---TAA-TAAAGTA-TCTA-----------------------------------------------------------AAA----------------------------------------TATC-TAGA-----ATGTATTAAAGTTTTTTGAAATCGTATACA------A---------------------------------------------------------------------------A------------------------------------------------TTAAATGCACAA---------------------------------TATT--TTTAGGATTTTTTCTAATCGTTTATTGCGTAAA-----------------------------ATTTTAGTAT--------------------------------TCAGT---------------------------TTTAATG------AAATACCAATTTATAACCAAGT-------------------GTCTATATAT---------------------------CCCAA------------------TCTCACCTA----TACACTCTT-GATATTCTCTCTT------------------CCCTCCCTGGAA---------------C----TG----GAAATCAG-------------------------------CTCCT-----AAC-AAATCACTCTT-GAGTGACGAACAGAGTGTTTTTG--GAACGAAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................CTCAGTTGGTGAGGACGTGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00300000000000003000
................................GCTCAGTTGGTGAGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00211000000000000000
.................................................GTGTTCGCGGTCTAC-AGAA----------------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
..................................TCAGTTGGTGAGGACGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000000001000
..................................TCAGTTGGTGAGGACGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000001000
........................AACAGAGCGCTCAGTTGGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
.............................AGCGCTCAGTTGGTGAGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
............................GAGCGCTCAGTTGGTGAGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
...............................CGCTCAGTTGGTGAGGACGTGTTCGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000100000
..................................TCAGTTGGTGAGGACGTGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
..................AGTTGGAACAGAGCGCTCAGTTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000000000
............................GAGCGCTCAGTTGGTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
................................GCTCAGTTGGTGAGGACGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
................................GCTCAGTTGGTGAGGACGTGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
............................GAGCGCTCAGTTGGTGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGGATTTTTTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000000010000000
droSec2
TTTCAG---------TTCAGTTGGAACAGAGCGCTCAGTTGGTGAGGACGTGTTCGCGGTCTCC-AGAA--G--------------AATA---------TAT---TAA-TAAAGTA-TCTA-----------------------------------------------------------AAA----------------------------------------TATC-TAGA-----ATGTATTAAAGTTTTTTGAATTCGTATACA------A---------------------------------------------------------------------------A------------------------------------------------TAAAATGCACAA---------------------------------TATT--TGTAGGATTTTTTCTAATCGTTTATCGCGTAAA-----------------------------ATTTTAGTTT--------------------------------CCGGT---------------------------TTTAACA------AAATACCAATTTATAACCAAGA-------------------ATCTATATAT---------------------------CCCCA------------------TCTCACTTG----TACACTCTT-GATATTCTCTCTT------------------CCCTCCCTGGAA---------------C----TG----GAAATCAG-------------------------------CTCCT-----AAC-AAATCACTCTT-GAGTGACGAACGGAGTGTTTTTG--GAACGAAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................GAGCGCTCAGTTGGTGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020011
...........................AGAGCGCTCAGTTGGTGAGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
................................GCTCAGTTGGTGAGGACGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
..................AGTTGGAACAGAGCGCTCAGTTGGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
.................................CTCAGTTGGTGAGGACGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAACGGAGTGTTTTTG--GAACG...2411.0010001
............................GAGCGCTCAGTTGGTGAGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
..................AGTTGGAACAGAGCGCTCAGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
...........................................GAGGACGTGTTCGCGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
dm3
TTTCAG---------TTCAGTTGGAACAGAGCGCTCAGTTGGTGAGGACGTGTTCGCGGAGGTA-AGTG--ACT----ACCGAA-GAATA---------TTT---TAA-TAAAGCA-TCTA-----------------------------------------------------------AAA----------------------------------------TATCATATA-AAATATGTATTAAAGTTTTTTGAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------AA---------------------------------TATG--TGTTGGATTTTTCCTAATTGTTTATTGTGTAAA-----------------------------ATTTTAGTTT--------------------------------TCAGT---------------------------TTTAGCC------AAATACCAATTTATAATCAAGT-------------------ATCTCTACAT---------------------------CTCAA------------------TCTCACTTT----TACACTCTT-GATATTCTCTCTT------------------CCCTCCCTGGAA---------------C----TG----AAAATCAG-------------------------------CTCCT-----AAC-AAACCACTCTT-GAGTTACGAACAGAGTGTTTTCG--GCCCAAAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................GCTCAGTTGGTGAGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000100000000000000001000000000000000000000000000000000000000000000000000101000200000000001000000000000000001000000
..................AGTTGGAACAGAGCGCTCAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020001010000000000000000000000000000000000000000000000000000000000000000001101000000000000000000000000000000000
..................AGTTGGAACAGAGCGCTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2017.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000001000000010000000201000000000000000000000000
................................GCTCAGTTGGTGAGGACGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2017.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200010000000000000000000000000000000000000000000000000000000000000000000000000001000000002000000000000000000000000
..................................TCAGTTGGTGAGGACGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100001000001000000110000000000000000000000000
..............................................GACGTGTTCGCGGAGGTA-AGTG--AC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................AGTTGGAACAGAGCGCTCAGTTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010000110000000001000000000000000000000000
..............................................GACGTGTTCGCGGAGGTA-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000011000000000000000000000000
.................................CTCAGTTGGTGAGGACGTGTTCGCGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GCGCTCAGTTGGTGAGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000001000000000000000000000000
.....................................GTTGGTGAGGACGTGTTCGCGGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003
......................................TTGGTGAGGACGTGTTCGCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000
..................AGTTGGAACAGAGCGCTCAGTTGGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............................................GACGTGTTCGCGGAGGTA-AGTG--ACT----A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000001000000000000000000000000
.........................................GTGAGGACGTGTTCGCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
.............................AGCGCTCAGTTGGTGAGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CTCAGTTGGTGAGGACGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................AGTTGGAACAGAGCGCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000010000000000
..................AGTTGGAACAGAGCGCTCAGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
..................AGTTGGAACAGAGCGCTCAGTTGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
................................GCTCAGTTGGTGAGGACGTGTTCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................CTCAGTTGGTGAGGACGTGTTCGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000000
...............................CGCTCAGTTGGTGAGGACGTGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TGGTGAGGACGTGTTCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CGCTCAGTTGGTGAGGACGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
................................GCTCAGTTGGTGAGGACGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AGTTGGAACAGAGCGCTCAGTTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000
...............................................ACGTGTTCGCGGAGGTA-AGTG--..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
..........................CAGAGCGCTCAGTTGGTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................GACGTGTTCGCGGAGGTA-AG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................TTCGCGGAGGTA-AGTG--AC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................TCAGTTGGTGAGGACGTGTTCGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.............................AGCGCTCAGTTGGTGAGGACGTGTTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................GCGGAGGTA-AGTG--ACT----AC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................CGCGGAGGTA-AGTG--ACT----ACCGAA-GAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TCAGTTGGTGAGGACGTGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TGGTGAGGACGTGTTCGCGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CAGTTGGTGAGGACGTGTTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................GTTGGTGAGGACGTGTTCGATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CGCTCAGTTGGTGAGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AGTTGGTGAGGACGTGTTCGCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................................GTGTTCGCGGAGGTA-AGTG--AC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..................AGTTGGAACAGAGCGCTCAGTTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................GTTGGTGAGGACGTGTTCGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................CGCGGAGGTA-AGTG--ACT----ACCGAA-A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TGAGGACGTGTTCGCGGAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................GACGTGTTCGCGGAGGTA-AGTG--ACT----...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................CAGTTGGTGAGGACGTGTTCGCGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................CGCGGAGGTA-AGTG--ACT----A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TGGTGAGGACGTGTTCGCGGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................GGACGTGTTCGCGGAGGTA-AG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................GAGGACGTGTTCGCGGAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GTTGGTGAGGACGTGTTCGCGGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................AGGACGTGTTCGCGGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GTGAGGACGTGTTCGCGGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CTCAGTTGGTGAGGACGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................GCGCTCAGTTGGTGAGGACGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GAGGACGTGTTCGCGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.............................................GGACGTGTTCGCGGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................................GTTGGTGAGGACGTGTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTGGAA---------------C----TG----AAAATCAG-------------------------------...........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GCGCTCAGTTGGTGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................ACGTGTTCGCGGAGGTA-AGTG--AC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................T----ACCGAA-GAATA---------TTT---TAA-TAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................ACT----ACCGAA-GAATA---------TTT---TAA-TAAAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AACAGAGCGCTCAGTTGGTGAGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................GTGAGGACGTGTTCGCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AGTTGGAACAGAGCGCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................CTCAGTTGGTGAGGACGTGTTCGCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AGTTGGTGAGGACGTGTTCGCGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................GTGTTCGCGGAGGTA-AGTG--ACT----...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............................................AGGACGTGTTCGCGGAGGAT-C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TCAGTTGGAACAGAGCGTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTTCAG---------TTCAGTTGGAACAGCGCGCTCAGTTGGTGAGGACGTGTTCGCGGAGGTA-AGTA--TCT----ACAGAA-GAATA---------TTTTTTTAG-TTAGGTA-GCCA-----------------------------------------------------------AAA----------------------------------------TATC-TATA-----ATGTATTAAAGTTCTTTTAGAGCGTAT-CA------A---------------------------------------------------------------------------A------------------------------------------------TTATAT--ATAC---------------------------------TATT--TATAGGATTT-TTTTAACATTTACGGGCGCACA-----------------------------ATTTTTGTTT--------------------------------TCAGT---------------------------TTTTACC------AAATATCAATGTACAACCAAGC-------------------CTCTATATAT---------------------------CTCTA------------------TCTCTCTTA----TCCCCTCTT-TATATTCTCTCTT------------------CCCTCCC-------------------------TG----GAAAACAG-------------------------------CTCCT-----AACTAAACCACTCTT-CAGTGACGAACAGAGTGTTTTTG--GGCCGAAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................TGAGGACGTGTTCGCGGAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
............................GCGCGCTCAGTTGGTGAGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
....................................................TTCGCGGAGGTA-AGTA--TCT----ACAGAA-GAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000001
.......................................TGGTGAGGACGTGTTCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000
droYak3
TTTCAG---------TTCAGTTGGAAACGCGCGCTCAGTTGGTGAGGACGTGTTCGCGGAGGTA-AGTCAGTCT----GCAGAA-AAATA---------TTT---TAG-CCAAGTA-ACCA-----------------------------------------------------------AAA----------------------------------------TATC-TATA-----ATGTATTAAAGTTCTTTAAAAACGTATAAA------G---------------------------------------------------------------------------------------------------------------------------AATGTATGAATAA---------------------------------TAAT--TATAGAATT-TTTCTAATTTGAAAAGGCGTACA-----------------------------GTCCTAGTAT--------------------------------TCAGT---------------------------TTCTACC------AAATATGAATGTATAACCAAGT-------------------CTCTATACAT---------------------------CTC-A------------------TCTCTCTTATATTCATATTCTT-CATATTCTCTCTT------------------TCTTCCC-------------------------TG----GAAGTCAG-------------------------------CTCCT-----AACTAAGCCACTCTT-GAGTCACGAAGAGAGCGTTTCCG--GCCCGAAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACGAAGAGAGCGTTTCCG--GCCCGA..27110.0010000000000010
.......................................TGGTGAGGACGTGTTCGCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
.............................................GGACGTGTTCGCGGAGGTA-AGTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.........................................GTGAGGACGTGTTCGCGGAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
..............................................GACGTGTTCGCGGAGGTA-AGTCAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
.............................CGCGCTCAGTTGGTGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000
droEug1
TTTCAG---------TTCAGTTGGAACAGCGCGCTCAGTTGGTTTAGACGTGTTCACGGAGGTT-AGTG--GTGTTAA----AT-AA-------------ATTTTTGG----TGA------------------------------------------------------------------------------------------TCGCTTAAGAAGT-----TACC-TATG-----AAATATTAAAGTTGTA----------GACA------A---------------------------------------------------------------------------ATATTCTGAAAA--------------TTACTGCAAA------------AA--------------------------------------------TG--TAT------------CTTATTGTAA----------AGTTTTTAAATTTTTATTTTAAAAGT---------TTCT--------------------------------TCAGT---------------------------TTTAACC------AAATACCGTTA-----TTATGT-------------------ATTGGTATATA---------------------AAAACCTC----TCTGTTATGTCTTCTCTCTCAT-------------------------TTCTA------------------CTCTGCC-------------------------TG----GAAAATAT-------------------------------CTCTT-----TTA-AA-----------ATTTTCTAACATATTTTTAAAA--TATCAAAGSizeHit CountTotal NormTotal
No Reads
droBia1
TTAATG---------------------------------------------------------------------------------------------------------AAATA-TCCAATTT----AATCTCTG------GCTTACAAAAATATATTTT-TAAGCCAAAGTTTTA--AAA----------------------------------------AATA---------------------------------ATATAAA------T-------AATAAAA--------------CAAGTT------------------------G----------------CT----------------------------------------------------------------------TTAAAATAAAT------A-----------------TTTTTTTTAATTGTAA----------TACTTCCAAAACTTTAATAAAAGAGT---------GTCT---------------------------------TGGC---------------------------TTCAGCC------ACATTCTAGCT-----CTCTAT-------------------TTCAACATGGT----------------------AAATCCC----TT--------------TATAAACCA----GTCTCTGC---CTGTTCTCTCCC------------------CTCTCAC-------------------------TG----GAAATCAG-------------------------------CTCTT-----ACCCAAGCCACTCTT-GAGCCACGAAGAGAGTTT---AG--GCTCGAAGSizeHit CountTotal NormTotal
No Reads
droTak1
TTTCAG---------TTCAGTTGGAACAGCGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTT-AGAA--GTGT--------------G---------CAT---ATA-------------------------------------------------------------------------------------------------TCGCTTAGAAA-------GATC-TGAA-----AAATATTAAAGTTCTTTAAAAAAATATAGA------A---------------------------------------------------------------------------------------------------------------------------AA--------------------------------------------TG--TATCTTAAGTTTTATCAAATAATTTCTGGCCCATAAAATTACAAAAATTTAATTAAAAAGT---------GTCT--------------------------------TAAAT---------------------------TTTT-----------------------CATCGAGT----------TACAATTGTATCTTTATATCAAACCTTCTCC--TCGCT---------CTTCTC----------------TCTCCC----------------------TCTC---T------------------CTCTCTC-------------------------TG----GAA-----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TTTAAG---------TCCAGTTGGAACAGTGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTT-AGAA--A-------------GAATA---------TAT---TTA-AAA---------------------------------------------------------------------------------------------------------------------------------ATTTAAGATCTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTTCAG---------TTCAGTTGGAACAGCGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTT-AGAA--AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTTCTTTAAATTATCTT----------ACATTAAAATATAT--------------AAAAATA-------ACATATCATTTAAAATGCTTTAAATATTAGCAGTT---------T------------------------TTTGGGCAAAGC-----------------------GTTAAAACTTAA------AATGCG---AAT-------------------------------------------------TACAAAAGT---------GTTT--------------------------------TCAGC---------------------------TTTTA-A------AAATACCGTTG--------------------------------------------------------TTTGG------TT-----------------------------------------TT-GTCATTTTCTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TTTCAG---------TTCAGTTGGAACAGCGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTT-AGCA--GTGTTAC----AA-TAATT---TTATTAATTTTT----TTATGT----------GT---------------------A--------------AAAAAT---------------------------------------------------------AGTT-GAAG-------------T-----------------------------------------------------------------------------------GCTGAACAGATAAACAAAA---------A------------------------TTATAGTGGCTG-----------------------TTTAAAATAAAT------ATTACT---ACT-------------------------------------------------ATTAAAAGT---------TTTTCTGATTTTCA------------TAAATATGTTTTAGTTTTTTCTAACAAAGTT-----------------------------TTA---ATTCTGGTT----------------------------AGT---------TTTTCTCTCTACACAAACCAC----TC--------------TCTAAATTA----TTCTCTCTT-TGTATTTTCTC-------------------------TC-------------------------TA----TAAACCAG-------------------------------CTCTT-----ATCCAAGCCTCTCTT-TAGCCACGAACAGAGTAC----AAGGCCCAGAGSizeHit CountTotal NormTotal
No Reads
droKik1
TTTCTG---------ATCAGTTGGAACGGCGCGCTCAGTTGGTGTAGACGTGTTCGCGGAGGTT-GGTT--TGG----ACATCA-CAAAA---------TTC--TTGT-TTAATTA-AAAA-----------------------------------------------------------AAATAGCTAACAGAAATTAGAATTAACTTTTA-----------AACC-TATA-AAGTGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTATTTAAAGATGAAATATATAA------AA---TATGTGTTT------------CCTTGCAA-------------------------------AATGT---------A-AT--------------------------------TCTGC---------------------------TTTCCTT------TAATATT------AAATTTAGG-------------------TTTTTTTTGT---------------------------TTTTCTCTC--------------TCTATACCA----TTCTCTTT---------TCGTTT------------------CCC---CTGTTC--------------T-----CC----AACCACAG-------------------------------CTCTT-----CCTAAAACCACTCTT-GAGCCACGAACAGCGTGT----GAGG--CAGAGSizeHit CountTotal NormTotal
No Reads
droAna3
TTGCGG---------ATCAGTTGGAAGACTGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTA-AGAA--GTGTTAC----CAAGAACCCTTATTGTATA----------------------------ATTCTGC-CAAAC------------TTACT-TT-AAAAACATGCGATTACT-------------------------------A-----------AGCC-------------------------------------------------------------------------------------------------TTCAATATTTATTTAATTTTAGTAACT---------T------------------------TATAATCAAGTTAATTAATG----------------------TTTAG------AAAGAT----ATTAC----------------------------------------------CTCATAAGT---------TT-------------------------------GTTTAAG---------------------------------CCATCTATAAATAC------------------------------------------------------------------------CCC--------------------TCTTTCTTC----TTTTTTTTT-TGCCCTCTCTCTCTATTTTAGACTC------TCCTCTCTGCT---------------ACCTGTTG----GAAGTCAG-------------------------------C--------------AACCACTCTTTGAGCCACGAACAGCGTGT----GAAG--AGCAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................CAGTTGGTTTGGACGTGTTCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
droBip1
TTGCGG---------ATCAGTTGGAAGACTGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTA-AGAA--GTTTTAA----AA-AAATA---------TTCTTT-AG---------------------ATTCTAT-TAAGC------------TATCTTTT-TAAATCAAATTAATA--ATA----------------------------------------AATC-TAAA-----------------------------------------------------------------------------------------------AAGAGGTATTACATTTTATTACCT---------T------------------------TAAAAAAAAAG-AATTTATG----------------------AATAT------AAAGAT----ATTAC----------------------------------------------CTTAAAAGT---------T--------------------------------GTTTAAG---------------------------------CCATCTACGAATAA-------------------------------------------CT---------------------------CTCAT------------------TCTTCTTTT----GGCCC----------TCTCTCT--ATTTTAGCCTC------TCCTCTCTGCT---------------ACCTGTTG----GAAGTCAG-------------------------------C--------------AACCACTCTT-GAGCCACGAACAGCGTGT----GA-------AGSizeHit CountTotal NormTotal
No Reads
dp5
CCACAG--------TTTCAGTTGGAAGATCGCGCTCAGTTGGTTTGGACGTATCCGCGGAGGTT-AGCG--GTATTCTAT--A----------TAAGTGATTTTTTT------------------------------------CTTGTT--------------AAAAATATA-------------------------------------------------------------------------------------------TATATATA---------------------------------------------------------------------------------TTATGATATAAAATCAAAGAATATTAATA----------------------------------------------TAATAATTAAT---------------------------------A----------GGTTGTTAAATTTGTATTAAT--------------------AATGTTTGTTCCAAGTGGTT-----------------TTTTTATGAAAGTGATTTCAGAATA------------------------CTTATGGTA--GCTTCCGC-----------------------------------TCTCTGC------CTCTA------------------TCTCTC----------------------TCTCTCTT------------------TCCCTGTTAGT---------------TCCAGTGA----GAGCACAGCCAACTACCACTTTTGGAACATTT----------G-----TTTTTGAGCCGCTCTT-GAACTACGGACAGCGTGT----GAGG--CATAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................GCTCAGTTGGTTTGGACGTATCCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCCGCTCTT-GAACTACGGACAGCG..................2611.0010100000000
................................GCTCAGTTGGTTTGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100000
.......................................TGGTTTGGACGTATCCGCGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
.............................................GGACGTATCCGCGGAGGTT-AGCG--GTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000001000
droPer2
GCACAG--------TTTCAGTTGGAAGATCGCGCTCAGTTGGTTTGGACGTATCCGCGGAGGTT-AGCG--GTATTCTAT--A----------CAAGTGATTTTT----TTT-------------------------------CTTGTT--------------AAAAATATA-------------------------------------------------------------------------------------------TATATATATAT------------------------------------------------------------------------------------------ATCAAAGAATATTAATA----------------------------------------------TAATAATTAAT---------------------------------A----------TGTTGTTAAATTTGTACTGTT--------------------CATGTGTGTTCCAAGTGGTT-----------------TTTTTATGAAAGTGATTTCGGAATA------------------------CTTATGGTA--GCTTCCGC-----------------------------------TCTCCGC------CTC----------------------TCTC----------------------TCTCTCTT------------------TCCTTGTTAGT---------------TCCAGTGA----GAGCACAGCCAACTACCACTTTTGGAACATTT----------G-----TTTTTGAGCCGCTCTT-GAACTACGGACAGCGTGT----GAGG--AATAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................CTCAGTTGGTTTGGACGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
............................TCGCGCTCAGTTGGTTTGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
droWil2
TT-------------TTCAGTTGGAATAAGCCACTCAGTTGGATTGGACGTGTTCACGGAAGAT-CAAA--GTT----------------------ATTTACTTTTGG----TTA----------GTAA------------AGTTT------------T-TTAAAAAAAATG----------------------------------------------CA-------------------------------------------AATATATA--T-------AATTAAAAATCTCTAAAATAGTTAAATACT--------------------------------------------------------------------------------------------------------------TTAACATAATTATCATT----------CT-------------------------------------------------TTTATAAAT---------TACTGTAATATTAAA--GAA---C--TAAATCTATTTTAGT---------------------------TT-GCCA------GAATAATGATTTATTC---------------------------------------------------TCTGC-----TCTCTC------------------TCTCTCTTC----TTCTCTATC-AGTATTTGGTC----------------ACTTGGCTCTC-----T-C-----------------TC-------GACAG-------------------------------CTCTTGCTCTCTGTGAGCCACTCTT-TAAACTT--------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-C-----------------TC-------GACAG-------------------------------CTCTTGCTCTCTGTGAGC.........................................2711.00101000
.................................................GTGTTCACGGAAGAT-CAAA--GTT----------------------A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-----T-C-----------------TC-------GACAG-------------------------------CTCTTGCTCTCTGTG............................................2611.00101000
....................................................TTCACGGAAGAT-CAAA--GTT----------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...................................................GTTCACGGAAGAT-CAAA--GTT----------------------ATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100001
droVir3
CTT--------------CAGTTGGAATTGTGCGCTCAATTGGTTTAGACGTGTGCACGGTTATT-ATTA--TA-----------------------TTTTTTTTT----TGGTGT----------GTTG------------CATTT------------T-TT-AAAAACATGACATTACT-----------------------------------------------------------------------------------------------------AATATAA--------------TAAAATA-------AATATTAATTTAA--------------------------------------------------------------------AA--------------------------------------------TG--CAT-----------TTTG------ATAAGTGCATA-----------------------------GTTTT----------GAATATTCGAATAAAT------CTATTCGAAT-----ATATGAATTATATTTAAAGATT------------------------CTTAT-ACA--GCT--CGC-----------------------------------TCTCTCC------CAA----TCTG------------TCAATCTTC----CTCTCTTCCTTGCTTTCTCTC----------------TCTTGGCTCAC-----AACTCAACACTCATGCCAGTGT---TGTGCACTGTTTACTTCCA--------------GCCACTGCG---A-GTTCTTTGAGCCGCTCTT-CAACGGCGTACAGCGTGT----GAGG--CATAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................CTCAATTGGTTTAGACGTGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000001000000000000000000000000000000000000000000000000000000100
.............................................AGACGTGTGCACGGTTAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000000000000000000000000000000000000000000000000000000000200
................................GCTCAATTGGTTTAGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000100000000000000000000000000000000
..................AGTTGGAATTGTGCGCTCAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000100000000000000000000000000000000000000000000000000000000
.................................CTCAATTGGTTTAGACGTGTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000100000000000000000000000000000000000000000000000000000000
..................AGTTGGAATTGTGCGCTCAAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...............................CGCTCAATTGGTTTAGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000001000000000000000000000000
...................................CAATTGGTTTAGACGTGTGCACGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000001
............................GTGCGCTCAATTGGTTTAGACGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
..................................TCAATTGGTTTAGACGTGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000100
...............................CGCTCAATTGGTTTAGACGTGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
.................................CTCAATTGGTTTAGACGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000001000000000000000000000000
.................................CTCAATTGGTTTAGACGTGTGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000100000000000000000000000000000000000000000000000000000000
........................................GGTTTAGACGTGTGCACGGTTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000010000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTACAGCGTGT----GAGG--C....1711.001000000000000000000000000000000000000000000000000000000010000000
.........................................GTTTAGACGTGTGCACGGTTATT-AT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
..................................TCAATTGGTTTAGACGTGTGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
droMoj3
TACCAGCAACAA--CTTCAGTTGGAATTCTGCGCTCGCTTGGACTAGACGTGTTTGCGGCTGATTCGCA--CCT----AAAAAT-AA---------ATAAATATTTGCTTGGTGCAT--------TTAA------------ATTTT------------A-GTAAGAAGTGTG----------------------------------------------CAAATAATAGTA-GAAT-------------T--------------------------------AATA---------------------------------------------------AATAAATAA----------------------------------TGTAAT------------AT--------------------------------------------T------ATAAA--------------------------------------ATATATTTAAGAAGTGCAATTGCTGTT------GAAAATTCCAAAT-------------------------------------------AAA------------------------ATTAAAACA--GCTAACGCGTTAT------CTCTGTATGT---------------------------TTCTC--CCTCTCACAGCTCCTATCTCAT--------------------------------------------------------------------------TCCAGTGCTCTTGTGCACTGTTTACTTCCA--------------GCCAGTGTT--TG-GTTCTTTGAGCCGCTCTT-GAACGGCGTACAGAGTGT----GAGG--CATAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................CTTGGACTAGACGTGTTTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002020000
...................................CGCTTGGACTAGACGTGTTTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
.................CAGTTGGAATTCTGCGCTCGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
................................GCTCGCTTGGACTAGACGTGTTTGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
.............................TGCGCTCGCTTGGACTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.................................................GTGTTTGCGGCTGATTCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
........................................GGACTAGACGTGTTTGCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
................................GCTCGCTTGGACTAGACGTGTTTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100
....................................GCTTGGACTAGACGTGTTTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
................................GCTCGCTTGGACTAGACGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
........................AATTCTGCGCTCGCTTGGACTAGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
....................................GCTTGGACTAGACGTGTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTTGTGCACTGTTTACTTC..................................................................................2211.001000010
droGri2
GGCAAC----TAGTTGTCAGTTGGAATTGTGCGCTCAATTGGTTAAGACGTGTCGACGGATAATTAACG--GCT----GTTGAG-TT---------GTATTTTTTTTGTTGGTGT----------GT---------------------T--------------AAAGATATG----------------------------------------------C------------A-----AAATA------------------ATAA----------ACACTATTATAATT--------------TAAATTAGTTTATCAATATA------------------------------------------------------------------------------------------------------ATTTAAAT------A----TG--TAT-----------TTCAA------------------------------------T--------------------AATATTAATTCCAAGTGCAC-----------------T---TAAAAATTAAAT-GTGAA------------------------ATGTTCTTCAGAAA-------------------CTTT--------------TTTC--TCT----------CTCTCTCTC--------------TCTCTGTCT----CTCTCTAT------------------TTGTGACTCTCTCTTTGCTCAC-----AACTCAACTCAC----CT---------------------TTCCA--------------GTCGCAGCA---A-GTTCTTTGAGCCGCTCTTTGAACGGCGTACAGCGTGT----GAGG--CATAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 10:59 AM