ID:

dsi_11759

 Coordinate:

x:10132610-10132889 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.7

Flybase annnotation

CDS [x_10132248_10132568_-]; five_prime_UTR [x_10132569_10132712_-]; exon [x_10132248_10132712_-]

No Repeatable elements found

Sense Strand Reads

-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------#########################################################################################################################################################
TGTTTGGAATTCAAAAAATATATTAGCATACTTACACAGACCATTTGTGTGCAGTCAACCAATTGGTCGACTCAATTTCATCTTCGGCAGTTCGAAGCTAAATTATCATTTTGATTTATGTTCTTAAAAGAGGAAAAAAACGTGCGTTCATCGCTTCTAAAACTGTCGATCAAAGTTGGCCACGACAAATACATCGGATGTCATTTCGACCGACTGGCTCACAATCTCGTTAGCCAATCTCAGTCCAGATCTCAACGTTGTAACATCAAAATTAAAAATTGTAAAAAGTGAAGCTCCGTTTTTATCCTTTTTTACCAACCAACTTTGAAGCCAAACTAAATCGTTTTAAAATCAACAAACAGTAAACCAACATGGGCGAC
***********************************************************************************************************************************************************************************..........((((.((..((..((((.(((.((.(((((.((......)).)))))...)).))).))))..)).)).))))...........*********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
.......................................................................................................................................................................................................................................AGCCATTCTCAGTTCGGAT.................................................................................................................................. 19 3 20 17.70 354 271 83 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................AGCCGATCTCAGTCCGGA................................................................................................................................... 18 2 2 4.50 9 0 0 9 0 0 0 0 0 0
...................................................................................................................................................................................CCACGACAAATACATCGGA...................................................................................................................................................................................... 19 0 1 2.00 2 0 2 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................TGAAGCCAAACTAAATCGT.................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0
..................................................................................................................................................................CTGTCGATCAAAGTTGG......................................................................................................................................................................................................... 17 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.........................................CATTTGTGTGCAGTCAACCA............................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................................................................CCAGATCTCAACGTTGTAACATCAAAATT........................................................................................................... 29 0 1 1.00 1 0 0 0 0 1 0 0 0 0
...............................................................................................................................AAGAGGAAAAAAACGTGCG.......................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................................AGCCGATCTCAGTCCGGATC................................................................................................................................. 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................ATTTCGACCGACTGGCTCACAATCTCGT...................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................ACTGTCGATCAAAGTTGGC........................................................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...............................................................................ATCTTCGGCAGTTCGAAGCT......................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................TTACCAACCAACTTTGAAGCC................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................AGGAAAAAAACGTGCGTT........................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................TTCTAAAACTGTCGATCAAAGTTGGC........................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................ATCAAAATTAAAAATTGTAAAAAGTGA......................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0
...TTGGAATTCAAAAAATATATTAGC................................................................................................................................................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0
......................................................................................................TTATCATTTTGATTTATG.................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................................................................................................GTCCAGATCTCAACGTTGTA...................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................AGCCATTCTCAGTTCGGATC................................................................................................................................. 20 3 5 0.60 3 3 0 0 0 0 0 0 0 0
.............................................................................................................................AAAAGAGGAGAAAAACGTG............................................................................................................................................................................................................................................ 19 1 2 0.50 1 0 0 0 1 0 0 0 0 0
................................................................................................................................AGAGGAAAAAAACGT............................................................................................................................................................................................................................................. 15 0 2 0.50 1 0 0 0 1 0 0 0 0 0
..................................................................................TTCGCCAGATCGAAGGTAAATT.................................................................................................................................................................................................................................................................................... 22 3 2 0.50 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................AAGCCGATCTCAGTCCGGAT.................................................................................................................................. 20 3 10 0.40 4 0 0 4 0 0 0 0 0 0
.............................................................................................................TTTGATTTGTTTTCTTAAAAG.......................................................................................................................................................................................................................................................... 21 2 3 0.33 1 0 0 0 0 0 0 0 0 1
......................................................................................................................................................................................................................................AAGCCGATCTCAGTCCGGATC................................................................................................................................. 21 3 3 0.33 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................TTTTAACAACCAACTTAGAA................................................... 20 2 3 0.33 1 0 0 0 0 0 0 1 0 0
........................................................................................................................................................................................................................................GCCATTCTCAGTTCGGATC................................................................................................................................. 19 3 20 0.25 5 5 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................TTTAACAACCAACTTAGAA................................................... 19 2 4 0.25 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................................AGCCGATCTCAGTCC...................................................................................................................................... 15 1 9 0.22 2 0 0 2 0 0 0 0 0 0
....................................................................................CGGCAGTTCGAACCT......................................................................................................................................................................................................................................................................................... 15 1 7 0.14 1 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................GCCGATCTCAGTCCGGAT.................................................................................................................................. 18 2 7 0.14 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................TTAACAACCAACTTAGAA................................................... 18 2 8 0.13 1 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................................ATCTCAGTCCGGATC................................................................................................................................. 15 1 16 0.13 2 0 0 1 0 0 0 1 0 0
.......................................................................................................................................................................................................................................AGCCATTCTCAGTTCAGATT................................................................................................................................. 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0
.............AAAAATCTATTAGCATA.............................................................................................................................................................................................................................................................................................................................................................. 17 1 10 0.10 1 0 0 0 1 0 0 0 0 0
..............................................................................................................................ACAGAGGGACAAAACGTGC........................................................................................................................................................................................................................................... 19 3 20 0.10 2 0 0 0 0 2 0 0 0 0
....................................................................................CGGCAGTTCGAATCT......................................................................................................................................................................................................................................................................................... 15 1 11 0.09 1 0 0 0 0 0 0 0 0 1
.......................................................................................................................................................................................................................................AGCCGATCTCAGTCCGG.................................................................................................................................... 17 2 11 0.09 1 0 0 1 0 0 0 0 0 0
TGTTCGGAAGTCAAAAAA.......................................................................................................................................................................................................................................................................................................................................................................... 18 2 13 0.08 1 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................................................................................................TATTAAAAAGTGGAAAAAGTGA......................................................................................... 22 3 14 0.07 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................TTTAACAACCAACTTAGA.................................................... 18 2 16 0.06 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................................AGCCAATCTCAGTTCGGATT................................................................................................................................. 20 3 17 0.06 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................ACACCCGATCTCATTTCGA........................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................................AAGCCGATCTCAGTCCCGA................................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................TAACAACCAACTTAGAACC................................................. 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

ACAAACCTTAAGTTTTTTATATAATCGTATGAATGTGTCTGGTAAACACACGTCAGTTGGTTAACCAGCTGAGTTAAAGTAGAAGCCGTCAAGCTTCGATTTAATAGTAAAACTAAATACAAGAATTTTCTCCTTTTTTTGCACGCAAGTAGCGAAGATTTTGACAGCTAGTTTCAACCGGTGCTGTTTATGTAGCCTACAGTAAAGCTGGCTGACCGAGTGTTAGAGCAATCGGTTAGAGTCAGGTCTAGAGTTGCAACATTGTAGTTTTAATTTTTAACATTTTTCACTTCGAGGCAAAAATAGGAAAAAATGGTTGGTTGAAACTTCGGTTTGATTTAGCAAAATTTTAGTTGTTTGTCATTTGGTTGTACCCGCTG
***********************************************************************************************************..........((((.((..((..((((.(((.((.(((((.((......)).)))))...)).))).))))..)).)).))))...........*********************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M024
male body		 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
...........................................................................................................................................................................................................................................TTAGAGTCAGGTCTAGAG............................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................TTCGAGGCAAAAATAGGAAAA..................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................GCGGTTAGAGTCAGGTCTAGAGTTG............................................................................................................................ 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................AATCGGTTAGAGTCAGGTCTA.................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................AAAATTTCAGTTGTTTGT................... 18 1 2 0.50 1 0 0 0 1 0 0 0 0 0
........................................................TTGGTTAACCGGCTGAGC.................................................................................................................................................................................................................................................................................................................. 18 2 4 0.50 2 0 2 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................GTTCGCGGCAAAAACAGGAAA...................................................................... 21 3 5 0.20 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GGCTGACCGAGTGTG............................................................................................................................................................ 15 1 8 0.13 1 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................CTGGCTGACAGAGTG.............................................................................................................................................................. 15 1 9 0.11 1 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................................................................................................................................................................................................................AAAATTTGAGTTGTT...................... 15 1 20 0.10 2 0 0 0 0 2 0 0 0 0
.............................................................................................................................................................................................................................................................TTGCAATCTTGTAGTTT.............................................................................................................. 17 2 20 0.10 2 0 0 0 0 0 0 0 0 2
................................................................................................................................................................................................................TGGCTGACAGAGTGCT............................................................................................................................................................ 16 2 20 0.10 2 0 0 0 0 1 0 0 1 0
...................................................................................................................................................................................................................................................................................................................................................................GTCTGTCATTTGGTTACACC..... 20 3 12 0.08 1 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................AAAATTTTGATACCTAGTTTC............................................................................................................................................................................................................. 21 3 12 0.08 1 1 0 0 0 0 0 0 0 0
.......................................................CTTGGTTAACCGGCTGAGC.................................................................................................................................................................................................................................................................................................................. 19 3 17 0.06 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................GGTTCTGTTTATGTA.......................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 1 0
......................................................................................................................ACAAGAACTTTCTACTGTTT.................................................................................................................................................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................................CTGGCTGACAGAGTGC............................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:10132560-10132939 - dsi_11759 TGTTTGGAATTCAAAAAATATATTAGCATACTTACACAGACCATTTGTGTGCAGTCAACCAATTGGTCGACTCAATTT-----CATCTTCGGCAGTTCGAAGCTAAATTATCATTTT--------------GA-TTTATGTTCTT---------------------------------------------AAAAGAGGAAAAAAACGTG------CGTTCATCGCTTCTAAAACTGTC-----------------GATCAAAGTTGGCCACGACAAATACATCGGATGTC--------ATTT-C--GACCGACTGGCTCACAATCTCGTTA-GCCAATCTCAGTC-CAGATCTCA----A-CGTT--------------------------GTAACATCAAAATTAAAAATTGT-AAA---------------------------------------------A-A-------------------------------------------GTGAAGC--TCCGTTTTTAT-CCT----TTTTTACCA-------ACC-AACTTTGAAGCCAAACTAAATCGTTTTAAAATC----------AACAA----------ACAGT-AAACC---AACATGGGCGAC
droSec2 scaffold_15:1372292-1372654 - TATTTGGAATTCAAAAAATATATTAGCATACTTACACAGACCATTTGTGTGCAGTCAACCAATTGGTCGACTCAATTT-----CATCTTCGGCAGTTCGAAGCTAAATTATCATTTT--------------GA-TTTATGTTCTT---------------------------------------------AAAAGAGGAAAAAAACGTA------CGTTCATCGCTTCTAAAACTGTC-----------------GATCAAAGTAGGCCACGACAAATACATCGGATGTC--------ATTT-C--GACCGACTGGCTCACAATCTCGTGA-GCCAATCTCAGTC-CAGATCTCA----A-CGTT--------------------------GTAACATCAAAATTAAAAATTG-------------------------------------------------------------------------------------------------------------TTTTTAT-CCT----TTTTTACCA-------ACC-AACTTTGAAGCTAAACTAAATCGTTTTAAAATC----------AACAA----------ACAGT-AAACC---AACATGGGCGAT
dm3 chrX:10674542-10674920 - TATTTGTAATTCAAAAATTATATTAGCATACTTACACAGACCATTTG--TGCAGTCAACCAATTGGTCGTCTCAATTT-----AATCTTCGGCAGTTCGAAGCTAAATTATTATAAT--------------TATTTTCTGTTGTT---------------------------------------------AAAAGAGGAAAAAAACGTA------CGCTCATCGCTTCTAAAATTGTT-----------------GGTCAAAGTAGGCCACGATAAATACATCGAATGTC--------ATTT-C--GACCGACTGGCACACAACCTCGTTA-GCCAATCTCAGTT-CAGATCTCA----A-CGTT--------------------------GTAACATCAAAATTAAAAATTGT-AAA---------------------------------------------A-A-------------------------------------------GTGAAAG--TCCGTTTTTAT-CCT----TTTTTACCA-------ACC-AACTTTGAAGCTAAACTAAATCGTTTTAAAATC----------ATTAA----------ACAGT-AAACT---AACATGGGCGAT
droEre2 scaffold_4690:4456377-4456794 + TATTT-TACTTGAAAAATTATAGTAGCATACTTACACAGACCTTTTG--TGCAGTTAATCAATGGGTCTACTTTATAAAAAAAAAACTTCGGCAGGTCGAAGTTAATAGATCCGTTTCGCGGAACTTTTTCTA-TATCTGTTCTTCAGACATATCCGATTTCTATTCAAGCT------------------AAATCGGGAATAAAACGTT------CGTCCA----TTTTTAAACTGCG-----------------AATCAAAGTAAGTCAAGCCAAATACATCGAATGTC--------AATT-T--GACGAACGGGCTCACAACGTTGTTA-GTCTATCACAGTT-CAGATCTCT----A-CGTT--------------------------GTGACATCAAAATTATAAGTTAA--AA---------------------------------------------A-A-------------------------------------------GTGAAAG--TCCGTTTTTAT-CCT----CTTTTACCA-------ACC-AACTTTGAAGCTAACTTGAATCGTTTTAAAATC----------AACAA----------ACAGT-AATCC---AACATGGGCGAT
droYak3 X:19244656-19245051 - TT-TTATAATTTAGAAAATATAGTAGCATACTTACACAGACCATTGGA-----------------------------------AAACTTCGGCAGATCGAAGTTAAGTCAACAT------------------A-TTTCTGTTCTTCAGACATCTCCGATTTCTACTCAAGCTAAATCGCAGCATAAACTAAAAAGGCGAATGAAACG----------TTCAGCGATTTCAAAACTGCG-----------------AATCAAAGTAAGCCAAGCGAAATATATCGAAAGTC--------AATT-T--GACGAGCGGGCTCACAACCTTGTTA-GCCTATCACAGTT-CAGATCTCT----A-CGTT--------------------------GTGACATCAAAATTATAAGTTGA--AA---------------------------------------------A-A-------------------------------------------GTGAAAG--TCCGTTTTTAT-CCTGTTTTTTTTACCAACCAACCACC-AACTTTGAAGCTAACTTAAATCGTTTTAAAATC----------AACAA----------ACAGT-AATCC---AACATGGGCGAT
droEug1 scf7180000409538:11962-12116 + A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCATAACAGTT-CAGATCGTG---TT-CGTT--------------------------GTTAAAGCAAAATTATAAGTAAC-AAA---------------------------------------------G-A--------------------------------------------AAAAAA--TC---TTTTAT-ACA-----TTTTACTT-------TAA-AGCTTTGATGCTAAACTAAATCGTTTTTAAATTAGAAAAAACCAGTAA----------ACAAT-AATCC---AGTATGGGTGAT
droBia1 scf7180000302126:3611637-3611858 - TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAATTGTA-----------------GCTCCAAGTTGGCCAGGCCAATCATATCGCCTGTC--------AACC-T--CCCGAACGGGCTCAGAACTTTGATA-GCCCATATCAGTT-CAGGTCTCG---TT-CGTT--------------------------GTTGAATCAAAATTATCAGTTGC-AAA---------------------------------------------A-A-------------------------------------------GTGAA-A--TCGGTTTTTAT-TCT-----TTTTACCA-----------AACGTTGATGCCAATCGGAATCGTTTTAACATC---------AAGCGA----------ACAAT-AATCC---AACATGGGCGAT
droTak1 scf7180000415394:513682-513905 - TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAAATGTA-----------------GGCCTAAGTTGGCCAAGGCAATGCTTTCGTAGGTC--------AACT-G--CTCCAAGGGGCTCAGAACTTAGTTA-TCCTACGTCAGTT-CAGATCTCG---TA-CGGA--------------------------GTCGAATCAAAATTACAAGTTAT-AA----------------------------------------------A-A-------------------------------------------GTGAAAA--TCGG-TTTTAT-TCT-----TTTTACCA-------TCC-CGCTTTGACGCTAATTCGATTCGTTTTAAAATC---------AAGCAA----------CCAGT-AATCC---AACATGGGCGAT
droEle1 scf7180000491043:151027-151249 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACGTTGGCCGCGCCAATGCTTTCTTATGTT--------TTCG-A--TTTGATCCGGCTCAGAACTTCGTCG-ACCTATGCCAGTT-CAGATCTTGTCGTT-CGTG--------------------------GCTCAGTCAAAATTATAAATTGT-GAA---------------------------------------------A-A-----------------------------------A----AACGTATAAG--AC-A-TTTTACTCCT----TTTATAGCC-------TCC-AACTTTGATATTGAACCAAATCGTTTTACGTAA---------AAGCAA----------ACCGTGAATCCAACAATATGGGCGAC
droRho1 scf7180000779333:773546-773754 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTTGGCCAAGCCAACGCTTTCGTATGTT--------TTCA-G--TTCAAACGGGCTCAGAACTTCGTCA-GTCTTTGTCAGTT-CAGATCTCG---TT-CGCT--------------------------GCTGAATCAAAATTATAAATTGTGAAA---------------------------------------------A-A-------------------------------------------GTAGAAG--TC-G-TTTTAG-TCT-----TTTTACCT-------TCC-AACTTTGATACTAAACTGAATTGTTTTAAACTA---------AAGAAA----------ACCATAAATCC---AAAATGGGTGAT
droFic1 scf7180000453882:527817-528030 - C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACGTTGGCCAAGCCAATGCCTTCGAATGGA--------ATTG-A--AGGCAGTGGGGTCAGAACTTCGTAT-GCCCATACTAGTT-CAGATCTCG---GT-CGTT--------------------------GTTGAATCAAAATTATAAATTGT-AAA---------------------------------------------A-A-------------------------------------------GTGTAAA--TCGGCTTTTAT-TCT----TTTTTACCC-------ACAAAGATTTGAAGACTAACAATATCGTTTTAAAAA--------ACAAGCAA----------ACAGT-AAACC---AACATGGGCGAT
droKik1 scf7180000302517:157060-157366 - AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAATAAAAAAACGGGTTATATGGGTCAACCCTCCCTTAACTGCCATTAAGCCAAATATCTACATCAAAGTTGGCCAAGACAACTCCATCGCACCTGAATCGA--ACCG-ACAACCGTCTGGGCTTAGAATCTCGTCAGGCCTGCGTCAGTT-CGGGTCTCAG--TTCCGTTAATAAGTTAGAAATTATTTAAATTCGTTTATATCAAAATTATACGTTGT-TAT---------------------------------------------ACCGCGTTTTACAGT------------------------------CTTGAA-TTCTTTGTTTTTTT--TT----TTTTTACCA-------ATA-AAC-----------------------CAAAAAC----------AGCTA----------AGAAT-TCTCA---ACAATGGGTGAA
droAna3 scaffold_13417:1265135-1265425 - A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGGCCATGCCAGCCCTGCCCCATCAA-GTCGAGAATCG-A--ATCGAGGGAGCTCACAATCTCGTTA-GCCTATGTCAGTT-CGGGTCTCAA--TT-CGTT--------------------------CCTGAATCAAAATTATAAATTGC-AC-CAAAAACTAAACAAAAAAAAAAAAAGTACCCCAAAAAAAAA------------------AAAAGTAAAGAAAAACTAACCAAAA----A--ACGTATT--TTTTTTTTTAC-CCT-----TTTAACTC-------CCC-AACTCTGATGCGAAACTGATTCGTTTTAT--TC-G-----ACAAGCCAAGAAGTAACAAAAAC-GGTCC---AAGATGGGTGAA
droBip1 scf7180000395692:4941-5218 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAGTTGGCCATGCTAGCCCTGTCCCCTCAA--------ATCGAA--TCCCAATGAGCTCACAATCTCGTTA-GCCTATGTCAGTTTCGGGTCACAA--TT-CGTT--------------------------CCTGAATCAAAATTATAAATTGG-TT-GAAAAAAAAACC-----AAAAAAAAGTACACCAAAAAAATAACAAAACGCGTTCGAAAAAAAAG--------AACT---CAAAAAATAAAAGTAAC-TTTTGTGTTTTTAA-CCC-----TTTTAACT-------CCT-AACTCTGATCCTAAGTCCAACTAAC--------------------CAA-----A----TC----AGTCCAAGAAGATGGGTGAA
dp5 XL_group1e:6000720-6000793 - AC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACATTTCG---TG-CAAA--------------------------ACTGAATCTGAATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATCGAGAAGC---------AAGCAA----AT----TTAGA-AAACC---AAAATGGGTGAC
droWil2 scf2_1100000004590:428647-428658 - A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGGGTGAA
droVir3 scaffold_13042:508416-508428 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AGGATGGGCGAT
droMoj3 scaffold_6308:642933-642954 + TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTCAACAAAATGGGTGAT
droGri2 scaffold_15203:5830529-5830541 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AACATGGGTGAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGTTTGGAATTCAAAAAATATATTAGCATACTTACACAGACCATTTGTGTGCAGTCAACCAATTGGTCGACTCAATTT-----CATCTTCGGCAGTTCGAAGCTAAATTATCATTTT--------------GA-TTTATGTTCTT---------------------------------------------AAAAGAGGAAAAAAACGTG------CGTTCATCGCTTCTAAAACTGTC-----------------GATCAAAGTTGGCCACGACAAATACATCGGATGTC--------ATTT-C--GACCGACTGGCTCACAATCTCGTTA-GCCAATCTCAGTC-CAGATCTCA----A-CGTT--------------------------GTAACATCAAAATTAAAAATTGT-AAA---------------------------------------------A-A-------------------------------------------GTGAAGC--TCCGTTTTTAT-CCT----TTTTTACCA-------ACC-AACTTTGAAGCCAAACTAAATCGTTTTAAAATC----------AACAA----------ACAGT-AAACC---AACATGGGCGACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................CCACGACAAATACATCGGA...................................................................................................................................................................................................................................................................................................................................................................1912.00220000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGCCAAACTAAATCGT............................................................1911.00100010000000000000
.........................................................................................................................................................................................................................................CTGTC-----------------GATCAAAGTTGG......................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
.........................................CATTTGTGTGCAGTCAACCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................C-CAGATCTCA----A-CGTT--------------------------GTAACATCAAAATT............................................................................................................................................................................................................................................2911.00100000001000000000
................................................................................................................................................................................................AAGAGGAAAAAAACGTG------CG........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
..........................................................................................................................................................................................................................................................................................................ATTT-C--GACCGACTGGCTCACAATCTCGT........................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
........................................................................................................................................................................................................................................ACTGTC-----------------GATCAAAGTTGGC.....................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
....................................................................................ATCTTCGGCAGTTCGAAGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCA-------ACC-AACTTTGAAGCC........................................................................2111.00110000000000000000
...................................................................................................................................................................................................AGGAAAAAAACGTG------CGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
.................................................................................................................................................................................................................................TTCTAAAACTGTC-----------------GATCAAAGTTGGC.....................................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAATTAAAAATTGT-AAA---------------------------------------------A-A-------------------------------------------GTGA................................................................................................................................2711.00100000001000000000
...TTGGAATTCAAAAAATATATTAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000010000000
...........................................................................................................TTATCATTTT--------------GA-TTTATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
......................................................................................................................................................................................................................................................................................................................................................GTC-CAGATCTCA----A-CGTT--------------------------GTA.......................................................................................................................................................................................................................................................2011.00110000000000000000
.................................................................................................................................................................................................AGAGGAAAAAAACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000000001000000
droSec2
TATTTGGAATTCAAAAAATATATTAGCATACTTACACAGACCATTTGTGTGCAGTCAACCAATTGGTCGACTCAATTT-----CATCTTCGGCAGTTCGAAGCTAAATTATCATTTT--------------GA-TTTATGTTCTT---------------------------------------------AAAAGAGGAAAAAAACGTA------CGTTCATCGCTTCTAAAACTGTC-----------------GATCAAAGTAGGCCACGACAAATACATCGGATGTC--------ATTT-C--GACCGACTGGCTCACAATCTCGTGA-GCCAATCTCAGTC-CAGATCTCA----A-CGTT--------------------------GTAACATCAAAATTAAAAATTG-------------------------------------------------------------------------------------------------------------TTTTTAT-CCT----TTTTTACCA-------ACC-AACTTTGAAGCTAAACTAAATCGTTTTAAAATC----------AACAA----------ACAGT-AAACC---AACATGGGCGATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................................................................................................................A-GCCAATCTCAGTC-CAGATCTCA----A-CG......................................................................................................................................................................................................................................................................................2611.0011000
........................................................................................................................................................................................................................................................................................ATCGGATGTC--------ATTT-C--GAC............................................................................................................................................................................................................................................................................................................................................1811.0011000
.........TTCAAAAAATATATTAGCATA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
................................................GTGCAGTCAACCAATTGGTCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
.........................................CATTTGTGTGCAGTCAACCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
...................................................................CGACTCAATTT-----CATCTTCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
dm3
TATTTGTAATTCAAAAATTATATTAGCATACTTACACAGACCATTTG--TGCAGTCAACCAATTGGTCGTCTCAATTT-----AATCTTCGGCAGTTCGAAGCTAAATTATTATAAT--------------TATTTTCTGTTGTT---------------------------------------------AAAAGAGGAAAAAAACGTA------CGCTCATCGCTTCTAAAATTGTT-----------------GGTCAAAGTAGGCCACGATAAATACATCGAATGTC--------ATTT-C--GACCGACTGGCACACAACCTCGTTA-GCCAATCTCAGTT-CAGATCTCA----A-CGTT--------------------------GTAACATCAAAATTAAAAATTGT-AAA---------------------------------------------A-A-------------------------------------------GTGAAAG--TCCGTTTTTAT-CCT----TTTTTACCA-------ACC-AACTTTGAAGCTAAACTAAATCGTTTTAAAATC----------ATTAA----------ACAGT-AAACT---AACATGGGCGATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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...................................................CAGTCAACCAATTGGTCGTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TA-GCCAATCTCAGTT-CAGATCTCA----A-C.......................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................CACGATAAATACATCGAATGTC--------ATT....................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TCTTCGGCAGTTCGAAGCTAAATTAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TA------CGCTCATCGCTTCTAAAATTGT....................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------ACC-AACTTTGAAGCTAAACTAAATCGT............................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................ATCTCAGTT-CAGATCTCA----A-CGTT--------------------------GT........................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................GCACACAACCTCGTTA-GCC..................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................GTT-CAGATCTCA----A-CGTT--------------------------GTAA......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TCTCAGTT-CAGATCTCA----A-CGTT--------------------------GTAACA....................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TC--------ATTT-C--GACCGACTGGC....................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AATCTCAGTT-CAGATCTCA----A-CGTT--------------------------GT........................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCA-------ACC-AACTTTGAAGCTAAACTAA.................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................GTT---------------------------------------------AAAAGAGGAAAAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
......................................................................CTCAATTT-----AATCTTCGGCAGTTCGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAA----------ACAGT-AAACT---AACATGGGCGAT2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TTCGAAGCTAAATTATTATAAT--------------TAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................GCTTCTAAAATTGTT-----------------GGTCAAAGTAGGC.....................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CACAACCTCGTTA-GCCAATCTCAGT.........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TCAATTT-----AATCTTCGGCAGTTCGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAAATTGT-AAA---------------------------------------------A-A-------------------------------------------GTGAAAG--TC.........................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TTT-C--GACCGACTGGCACACAAC.............................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TTTG--TGCAGTCAACCAATTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TCGTTA-GCCAATCTCAGTT-CAGATC.................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TT---------------------------------------------AAAAGAGGAAAAAAACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................GCCAATCTCAGTT-CAGATCTCA----A-CGT.....................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TCTCAGTT-CAGATCTCA----A-CGTT--------------------------GTA.......................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------ATTAA----------ACAGT-AAACT---AAC.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................CA----A-CGTT--------------------------GTAACATCAAAATTAAAAAT......................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................ATTT-C--GACCGACTGGCACACAACCTCGT........................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TC--------ATTT-C--GACCGACTGGCA...................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................ATTGTT-----------------GGTCAAAGTAGGA.....................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.......................................................................................TTCGGCAGTTCGAAGCTAAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................GGTCAAAGTAGGCCACGATAAATAC.........................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................AATACATCGAATGTC--------ATTT-C--GACCGAC........................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TCATCGCTTCTAAAATTGTT-----------------G.................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ATGTC--------ATTT-C--GACCGACTGGC....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................T-C--GACCGACTGGCACACAACCTCGT........................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GT-AAA---------------------------------------------A-A-------------------------------------------GTGAAAG--TCCGTTT....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TACTTACACAGACCATTTG--TGCAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CTGGCACACAACCTCGTTA-GC...................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TGCAGTCAACCAATTGGTCGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TCTCA----A-CGTT--------------------------GTAACATCAAAATTA...........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATCGTTTTAAAATC----------ATTAA----------ACA.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATCGTTTTAAAATC----------ATTAA----------ACAGT-A...................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TTATTATAAT--------------TATTTTCTGTTGTT---------------------------------------------AAAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................AATGTC--------ATTT-C--GACCGACTGGCA...................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TTT-C--GACCGACTGGCACACA...............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGT-AAACT---AACATGGGCGAT2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................TT-----AATCTTCGGCAGTTCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-CCT----TTTTTACCA-------ACC-AACTTTGAAGC.........................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................T-C--GACCGACTGGCACACAAC.............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AAAATTGT-AAA---------------------------------------------A-A-------------------------------------------GTGAAAG--TCCGT......................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TTGTT---------------------------------------------AAAAGAGGAAAAAAACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................AAGAGGAAAAAAACGTA------CG........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TTT-C--GACCGACTGGCACACAACCTCG.........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TTGT-AAA---------------------------------------------A-A-------------------------------------------GTGAAAG--TCCGTTTTTA.................................................................................................................2611.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TC--------ATTT-C--GACCGACTGGCACACAACCTCGT........................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAAAATC----------ATTAA----------ACAGT-AAA.................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAT-CCT----TTTTTACCA-------ACC-AACT................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------ACC-AACTTTGAAGCTAAA.....................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TCAGTT-CAGATCTCA----A-CGTG--------------------------..........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ATTGT-AAA---------------------------------------------A-A-------------------------------------------GTGAAAG--TC.........................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TATTT-TACTTGAAAAATTATAGTAGCATACTTACACAGACCTTTTG--TGCAGTTAATCAATGGGTCTACTTTATAAAAAAAAAACTTCGGCAGGTCGAAGTTAATAGATCCGTTTCGCGGAACTTTTTCTA-TATCTGTTCTTCAGACATATCCGATTTCTATTCAAGCT------------------AAATCGGGAATAAAACGTT------CGTCCA----TTTTTAAACTGCG-----------------AATCAAAGTAAGTCAAGCCAAATACATCGAATGTC--------AATT-T--GACGAACGGGCTCACAACGTTGTTA-GTCTATCACAGTT-CAGATCTCT----A-CGTT--------------------------GTGACATCAAAATTATAAGTTAA--AA---------------------------------------------A-A-------------------------------------------GTGAAAG--TCCGTTTTTAT-CCT----CTTTTACCA-------ACC-AACTTTGAAGCTAACTTGAATCGTTTTAAAATC----------AACAA----------ACAGT-AATCC---AACATGGGCGATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................CT----A-CGTT--------------------------GTGACATCAAAA..............................................................................................................................................................................................................................................1911.0010000010
...............................................................................................................................................................TTCTATTCAAGCT------------------AAATCGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................GTGACATCAAAATTATAAGT......................................................................................................................................................................................................................................2011.0010100000
.......................................................................................................................................................................................................................................AACTGCG-----------------AATCAAAGTAA.......................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
..............................................G--TGCAGTTAATCAATGGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
............................................................................................................................................................................................................................................................................................................................................GTCTATCACAGTT-CAGATCTCT----A-CGTT--------------------------..........................................................................................................................................................................................................................................................2711.0010000010
................................................................................................................................................................................................................................................................................................................................CAACGTTGTTA-GTCTATCACAG..........................................................................................................................................................................................................................................................................................................2211.0010000010
droYak3
TT-TTATAATTTAGAAAATATAGTAGCATACTTACACAGACCATTGGA-----------------------------------AAACTTCGGCAGATCGAAGTTAAGTCAACAT------------------A-TTTCTGTTCTTCAGACATCTCCGATTTCTACTCAAGCTAAATCGCAGCATAAACTAAAAAGGCGAATGAAACG----------TTCAGCGATTTCAAAACTGCG-----------------AATCAAAGTAAGCCAAGCGAAATATATCGAAAGTC--------AATT-T--GACGAGCGGGCTCACAACCTTGTTA-GCCTATCACAGTT-CAGATCTCT----A-CGTT--------------------------GTGACATCAAAATTATAAGTTGA--AA---------------------------------------------A-A-------------------------------------------GTGAAAG--TCCGTTTTTAT-CCTGTTTTTTTTACCAACCAACCACC-AACTTTGAAGCTAACTTAAATCGTTTTAAAATC----------AACAA----------ACAGT-AATCC---AACATGGGCGATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................CCATTGGA-----------------------------------AAACTTCGGCAGATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
..................................................................................................................................................................................................................................TTCAAAACTGCG-----------------AATCAAAGT.........................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................GA--AA---------------------------------------------A-A-------------------------------------------GTGAAAG--TCCGTTTT...................................................................................................................2111.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GTTGA--AA---------------------------------------------A-A-------------------------------------------GTGAAAG--TC.........................................................................................................................1811.00110000000000
droEug1
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCATAACAGTT-CAGATCGTG---TT-CGTT--------------------------GTTAAAGCAAAATTATAAGTAAC-AAA---------------------------------------------G-A--------------------------------------------AAAAAA--TC---TTTTAT-ACA-----TTTTACTT-------TAA-AGCTTTGATGCTAAACTAAATCGTTTTTAAATTAGAAAAAACCAGTAA----------ACAAT-AATCC---AGTATGGGTGATSizeHit CountTotal NormTotal
No Reads
droBia1
TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAATTGTA-----------------GCTCCAAGTTGGCCAGGCCAATCATATCGCCTGTC--------AACC-T--CCCGAACGGGCTCAGAACTTTGATA-GCCCATATCAGTT-CAGGTCTCG---TT-CGTT--------------------------GTTGAATCAAAATTATCAGTTGC-AAA---------------------------------------------A-A-------------------------------------------GTGAA-A--TCGGTTTTTAT-TCT-----TTTTACCA-----------AACGTTGATGCCAATCGGAATCGTTTTAACATC---------AAGCGA----------ACAAT-AATCC---AACATGGGCGATSizeHit CountTotal NormTotal
No Reads
droTak1
TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAAATGTA-----------------GGCCTAAGTTGGCCAAGGCAATGCTTTCGTAGGTC--------AACT-G--CTCCAAGGGGCTCAGAACTTAGTTA-TCCTACGTCAGTT-CAGATCTCG---TA-CGGA--------------------------GTCGAATCAAAATTACAAGTTAT-AA----------------------------------------------A-A-------------------------------------------GTGAAAA--TCGG-TTTTAT-TCT-----TTTTACCA-------TCC-CGCTTTGACGCTAATTCGATTCGTTTTAAAATC---------AAGCAA----------CCAGT-AATCC---AACATGGGCGATSizeHit CountTotal NormTotal
No Reads
droEle1
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACGTTGGCCGCGCCAATGCTTTCTTATGTT--------TTCG-A--TTTGATCCGGCTCAGAACTTCGTCG-ACCTATGCCAGTT-CAGATCTTGTCGTT-CGTG--------------------------GCTCAGTCAAAATTATAAATTGT-GAA---------------------------------------------A-A-----------------------------------A----AACGTATAAG--AC-A-TTTTACTCCT----TTTATAGCC-------TCC-AACTTTGATATTGAACCAAATCGTTTTACGTAA---------AAGCAA----------ACCGTGAATCCAACAATATGGGCGACSizeHit CountTotal NormTotal
No Reads
droRho1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTTGGCCAAGCCAACGCTTTCGTATGTT--------TTCA-G--TTCAAACGGGCTCAGAACTTCGTCA-GTCTTTGTCAGTT-CAGATCTCG---TT-CGCT--------------------------GCTGAATCAAAATTATAAATTGTGAAA---------------------------------------------A-A-------------------------------------------GTAGAAG--TC-G-TTTTAG-TCT-----TTTTACCT-------TCC-AACTTTGATACTAAACTGAATTGTTTTAAACTA---------AAGAAA----------ACCATAAATCC---AAAATGGGTGATSizeHit CountTotal NormTotal
No Reads
droFic1
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACGTTGGCCAAGCCAATGCCTTCGAATGGA--------ATTG-A--AGGCAGTGGGGTCAGAACTTCGTAT-GCCCATACTAGTT-CAGATCTCG---GT-CGTT--------------------------GTTGAATCAAAATTATAAATTGT-AAA---------------------------------------------A-A-------------------------------------------GTGTAAA--TCGGCTTTTAT-TCT----TTTTTACCC-------ACAAAGATTTGAAGACTAACAATATCGTTTTAAAAA--------ACAAGCAA----------ACAGT-AAACC---AACATGGGCGATSizeHit CountTotal NormTotal
No Reads
droKik1
AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAATAAAAAAACGGGTTATATGGGTCAACCCTCCCTTAACTGCCATTAAGCCAAATATCTACATCAAAGTTGGCCAAGACAACTCCATCGCACCTGAATCGA--ACCG-ACAACCGTCTGGGCTTAGAATCTCGTCAGGCCTGCGTCAGTT-CGGGTCTCAG--TTCCGTTAATAAGTTAGAAATTATTTAAATTCGTTTATATCAAAATTATACGTTGT-TAT---------------------------------------------ACCGCGTTTTACAGT------------------------------CTTGAA-TTCTTTGTTTTTTT--TT----TTTTTACCA-------ATA-AAC-----------------------CAAAAAC----------AGCTA----------AGAAT-TCTCA---ACAATGGGTGAASizeHit CountTotal NormTotal
No Reads
droAna3
A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGGCCATGCCAGCCCTGCCCCATCAA-GTCGAGAATCG-A--ATCGAGGGAGCTCACAATCTCGTTA-GCCTATGTCAGTT-CGGGTCTCAA--TT-CGTT--------------------------CCTGAATCAAAATTATAAATTGC-AC-CAAAAACTAAACAAAAAAAAAAAAAGTACCCCAAAAAAAAA------------------AAAAGTAAAGAAAAACTAACCAAAA----A--ACGTATT--TTTTTTTTTAC-CCT-----TTTAACTC-------CCC-AACTCTGATGCGAAACTGATTCGTTTTAT--TC-G-----ACAAGCCAAGAAGTAACAAAAAC-GGTCC---AAGATGGGTGAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACTAAACAAAAAAAAA..........................................................................................................................................................................................................2060.171010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACTAAACAAAAAAAAAA.........................................................................................................................................................................................................2160.171010000
droBip1
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAGTTGGCCATGCTAGCCCTGTCCCCTCAA--------ATCGAA--TCCCAATGAGCTCACAATCTCGTTA-GCCTATGTCAGTTTCGGGTCACAA--TT-CGTT--------------------------CCTGAATCAAAATTATAAATTGG-TT-GAAAAAAAAACC-----AAAAAAAAGTACACCAAAAAAATAACAAAACGCGTTCGAAAAAAAAG--------AACT---CAAAAAATAAAAGTAAC-TTTTGTGTTTTTAA-CCC-----TTTTAACT-------CCT-AACTCTGATCCTAAGTCCAACTAAC--------------------CAA-----A----TC----AGTCCAAGAAGATGGGTGAASizeHit CountTotal NormTotal
No Reads
dp5
AC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACATTTCG---TG-CAAA--------------------------ACTGAATCTGAATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATCGAGAAGC---------AAGCAA----AT----TTAGA-AAACC---AAAATGGGTGACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droWil2
A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGGGTGAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AGGATGGGCGATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTCAACAAAATGGGTGATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AACATGGGTGATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 02:57 PM