ID:

dsi_1173

 Coordinate:

2r:10451521-10451670 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGCCTTCTATATATATATATATTCTTATTCAATCGAATCTATTTAAATTTAAAAATCTAATGTTCCATTGCCGTGGTGTCTATCTCAACTTGTGAATTGGCAGAGGTCTCAAAAGGCAAGATAGTTTCAAAAAAGTCTAGTTCGTTCGTGCGTTGTTGTTGTGAATATTGATTACATTTAAGTGCTTGCAACTGCA
**************************************************...(((((((..(((((....)))))....((((....))))..........................((((....))))((((....(((.....)))...))))))))))).....(((.((((............)))).)))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR902009
testis
 M024
male body		 GSM343915
embryo
 M023
head
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
.....................................................................................................................................................................................................GTTCGTGCGTTGTTGTTG................................... 18 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0
.........................TGGTTGAAGTAGAAGCATTA............................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
............................TTGAAGTAGAAGCATTAAAC.......................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................GTAGAAGCATTAAACAGA....................................................................................................................................................................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......GATGAAGTCGATCCGCATATGGTTG........................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................TATCTAAACTCGTGGATTGGCA.............................................................................................. 22 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.......................TATGGTTGAAGTAGAAGCATTAAA........................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............CGATCCACATATGGTTGAGG........................................................................................................................................................................................................................ 20 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..............................GAAGTAGAAGCATTAAACAGACAAGC.................................................................................................................................................................................................. 26 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................CGCATATGGTTGAAGTAGAAGC................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....................GCATATGGTTGAAGTAGAAGCA................................................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................TTGAAGTAGAAGCATTAAACAGACAA.................................................................................................................................................................................................... 26 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0
......................ATATGGTTGAAGTAGAAGC................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................AAAAAGTCTAGTTCGTTCGTGC............................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................TCCATCGGATCTATTTTAATTT.................................................................................................................................................. 22 3 2 0.50 1 0 0 0 0 0 0 0 0 1 0
CTCAGGGATGAAGTCGATCG...................................................................................................................................................................................................................................... 20 3 3 0.33 1 0 0 0 0 0 1 0 0 0 0
.......ATTAAGTGGATCCTCATATG............................................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 1 0 0 0
...........AGTCGATCCGCATATGAC............................................................................................................................................................................................................................. 18 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0
............................................................................................CTAGTTAAATTTAAAAATTTA......................................................................................................................................... 21 2 7 0.14 1 0 0 0 0 0 0 0 0 1 0
.........................................................................................................AAAATCTAATGTTCCG................................................................................................................................. 16 1 8 0.13 1 0 0 0 0 0 1 0 0 0 0
.................TCCCCATATGGTTGAGG........................................................................................................................................................................................................................ 17 2 12 0.08 1 0 0 0 0 0 1 0 0 0 0
.....................CATATGGTTGAGGTA...................................................................................................................................................................................................................... 15 1 13 0.08 1 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................GTCCATTCGTGCGTTGTCG...................................... 19 3 14 0.07 1 0 0 0 0 0 1 0 0 0 0
.................TCCACATATGGTTGAGG........................................................................................................................................................................................................................ 17 2 15 0.07 1 0 0 0 0 0 1 0 0 0 0
..................................................................ATATCTATATTCTTATTC...................................................................................................................................................................... 18 1 16 0.06 1 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................ACTTGTGACTGTGCAGAGG.......................................................................................... 19 3 18 0.06 1 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................................................................TGCGTTGATGTGGTGAATC............................. 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0
..................CGGCATATGGTTGAGG........................................................................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1
......................................................................................................................................................................................................TTCGTGCGTTGTGGAT.................................... 16 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0
...................CGCATATGCTTGAAGG....................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1
..................................................................................................................................................TGGCTTGGGAGAGGTCTC...................................................................................... 18 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

AAGTTCCTACTTCAGCTAGGCGTATACCAACTTCATCTTCGTAATTTGTCCATTCCGGAAGATATATATATATATAAGAATAAGTTAGCTTAGATAAATTTAAATTTTTAGATTACAAGGTAACGGCACCACAGATAGAGTTGAACACTTAACCGTCTCCAGAGTTTTCCGTTCTATCAAAGTTTTTTCAGATCAAGCAAGCACGCAACAACAACACTTATAACTAATGTAAATTCACGAACGTTGACGT
**************************************************...(((((((..(((((....)))))....((((....))))..........................((((....))))((((....(((.....)))...))))))))))).....(((.((((............)))).)))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR553487
NRT_0-2 hours eggs
........................................................................................................................................................................CCGTTCTTTCAAGGTTTT................................................................ 18 2 11 0.18 2 2 0 0 0 0 0
.........................................................................................................TTTTAGATTACAAGG.................................................................................................................................. 15 0 8 0.13 1 0 1 0 0 0 0
................................................................................................................................................................................TCATAGTTTCTTCAGGTCA....................................................... 19 3 20 0.10 2 0 0 2 0 0 0
..............................................................................................................................................................................................GATCAAGTAAGCCGGCAAC......................................... 19 3 18 0.06 1 0 0 0 1 0 0
............................................................................................................................................................................................CAGATCAAGTAAGCCGGC............................................ 18 3 20 0.05 1 0 0 0 0 1 0
....................................................................................................................................AGATAGAGTCGAACA....................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:10451471-10451720 - dsi_1173 TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGCC----TT---CT-A------T-----------------A--TA--------TATATATATT-----C--------------TTATTCAA------------------------TCGAATCTATTTAAATT-----------------------------------TAAAAATCT--AATGTTCCAT---TGCCGT--------GGTGTC----------------TATC--TCAACTT--GTGAATTGGCAGAGGTCTCAAAAGGCAAGA---TAGTTTCAA-AA------------AAGT-------CTA------------G--TTCGTTCGTGCGTTGTT---G------TTGTGAATATTGATT------ACAT---TTAAGTGCTTGCAA------------------------------CTGCA
droSec2 scaffold_1:7289045-7289294 - TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGACC----TT---CT-A------T-----------------A--TA--------TATATATAT-----AC--------------TTATTCAA------------------------TCGAAACTATTTAAATT-----------------------------------TAAAAATCT--AATGTTCCAT---TGCCGT--------GGTGTC----------------TATC--TCAACTT--GCGAATTGGCAGAGGTCTCAAAAGGCAAGA---TAGTTTCAA-AA------------AAGT-------CTA------------G--TTCGTTCGTGTGTTGTT---G------TTGTGAATATTGATT------ACAT---TTAAGTGCTTGCAA------------------------------CTGCA
dm3 chr2R:9762156-9762413 - TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGCC----TT---CT-A------T-----------------A--TATATTTATATATATATATT-----C--------------TTATTCAA------------------------TCGAATCTATTCAAATT-----------------------------------TAAAAATCT--AATGTTCCAT---TGCCGT--------GGTGTC----------------TATC--TCAACTT--GTGAATTGGCAGAGGTCTCAAAAGGCAAGA---TAGTTTCAA-AA------------AAGT-------CTA------------G--TTCGTTCGTGCGTTGTT---G------TTGTGAATATTGATT------ACAT---TTAAGTGCTTGCAA------------------------------CTGCA
droEre2 scaffold_4845:16057331-16057578 + TTCAAGGATGAAGTTGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGCC----TT---CT-A------T-----------------TGATA----------------TTTCT-TC--------------TTATTCAA------------------------TTGAATCAATTCAAATT-----------------------------------TATAAATCT--AATGTTCCAT---TGCCGT--------GGTGTC----------------TATC--TCAACTT--GTGAATTGGCAGAGGTCTCAAAAGGCAAGA---TAGTTTCAA-AA------------AAGT-------CTA------------G--TTCGTTCGTGCGTTGTT---G------TTGTCAATATTGATT------ACTA---TTAAGTGCTTGCAA------------------------------CTGCA
droYak3 2R:7191322-7191567 + TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTACGGTT----CT---TT-A-------------------------GATA----------------TATTT-TC--------------TTATTCAA------------------------TCGAATCAATACAAATT-----------------------------------TATAAATCT--AATGTTCCAA---TGCCGT--------GGTGTC----------------TATC--TCAACTT--GTGAATTGGCAGAGGTCTCAAAAGGCAAGA---TAGTTTCAA-AA------------AAGT-------CTA------------A--TTCGTTCGTGCGTTGTT---G------TTGTGAATATTGATT------ACTT---TTAAGTGCTTGCAA------------------------------CTGCA
droEug1 scf7180000409462:3090282-3090536 + TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGTC----TT---CT-A------G-------------------------------------------TAGAGATTTAA------GGATTCTT------------------------TTGACTTTATTCAAATT-----------------------------------TATAAATCT--AATATTCCAT---TGCCGTGTG----TGGTGTC----------------TATC--TCAACTT--GTGAATTGGCAGAGGTCTCAAAAGGCAAGA---TAGTTTCAA-AA---------AG-AATT-------ATAGTTCGT----TCG--TTCGTTCGTTC---GTT---G------TTGTGAATAT---TT------ACTG---TTAAGTGCCTGCTA------------------------------CTGCA
droBia1 scf7180000302291:369947-370188 + TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGTC----TC---TA-A-------------------------GATA----------------TTTTT-----------------AAATACAA------------------------TCGACTCTATTCAAATT-----------------------------------TAAAAATCG--AATATTCCAT---TATCAT--------GGTGTC----------------TATC--TCAACTT--GTGAATTGGCAGAGGTCTCAAAAGGCAAGA---TAGTTTCCA-AA------------AAAT-------TCA------------G--TTTGTTCGTTAGTTGTG---G------TTGTGAATAT-GATA------ACT----GTAACTGCCTGCTT------------------------------CTGCA
droTak1 scf7180000415401:870261-870509 + TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGTC----TT---CT-T-------------------------GGTA----------------TTCTT-TG--------------GGCTTCAA------------------------TCGACTGTATTTAAATT-----------------------------------TACAAATTT--AATATTCTAT---TGCCGT--------GGTGTC----------------TATC--TCATCGT--GTGAATTGGCAGAAGTCTCAAAAGGCAAGA---AAGTT-CAA-AA------------AAGT-------CTAATTC--------G--TTCGTTCGTTCGTTGTT---G------TTGTGAATATTGATT------ACTC---TTTAATGCCTGCTA------------------------------ATGCA
droEle1 scf7180000491271:96385-96622 - TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTTGAAGCATTAAACAGGTGAGGTG----G-----------------------------------TA----------------TTTTT-AA----TATA------GGATTCAA------------------------TGAAATTTATTCAAAAT-----------------------------------TATAAATCT--AATATTTCAA---TGCCGT--------GGTGTC----------------TATC--TCAACTT--GTGAATTGGCAGATGTCTCAAAAGGCAAGA---AAGTTTCAA-AA------------AAGT-------CTC------------G--TTTGTTATTTAGTTTTT---G------TTGTGAATATTGATA------ATTG---TTAAGTGTCT------------------------------------GCA
droRho1 scf7180000779816:75417-75654 + TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGTC----TT---C--A---------------------------TA----------------TTTTGTAC--------------AGATTTAA------------------------TCGACTCTTTTTAAAAT-----------------------------------TATAAATCT--AATATTTCAA---TGCTGT--------GGTGTC----------------TATC--TCATCTT--GTGAATTGGCAGAGGTCTTAAAAGGCAAGA---TAGTTTCAA-AA------------AAGT-------TTC------------G--TTTGTTCTTTAGTTGTT---G------TTGTGAATATGGATA------ATTA---TTAAGTGCCT------------------------------------GCA
droFic1 scf7180000454066:1852024-1852267 + TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGTT----TT---CC-T-------------------------TTTG----------------C-----------TCAT------GGATTTAA------------------------TCACTTCTATTCAAATT-----------------------------------ATAAAATCT--AATATTCCAT---TGCCGT--------GGTGTC----------------TATC--TCAACTT--GTGAATTGGCAGAGGTCTCAAAAGGCAAGA---TAATTCCAA-GA----------G-AAAT-------CTT------------G--TTCGTTCGTTCGTTGTT---G------TTGTGAATATTGATT------ATTG---TTAAGTGCCTGCT-------------------------------TTGCA
droKik1 scf7180000301798:91366-91625 - TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGAA----TTGCTTTCATTC---------------T------------------------------------------------------CC------------------------GCGAATCACTTTAAATCT------CTGAAATA--------------------TAT-AATCTATAATTTTCCATTGATGCCGTGT------GGTGTCG---------------TATC--GCAACGT--GTGAATTGGCAGAGGTCTCCAAAGGCAAGA---TAGTTTCCA-AA------------A-TT--C---TCTC------------G--TTCGTTCGTTCGTTG------------TTGTGAATATTGAAT------AGTGTTATTAAGTGCCTGCTAATGCTG------------------------CTGCA
droAna3 scaffold_13266:17065004-17065273 - TTCAAGGATGAAGTCGATCCGCACATGGTTGAAGTAGAAGCATTAAACAGGTATGTCT----GTCCTATAATCC---------------TCCCTAAGATC----------------T-----------------------------AT----------------------T---ATATATCCGACTT--------------TCTAAAT---CC-------------AATCA-----ATTCCGT---TTCCGCGTGGGTC--GTGTC-------------TTCCATC--TCAACTC--GTGAATTGGCAGAGGTCTCCAAAGGCAAGA---TGGTTCCAA-AA------------AAGT-------TAAATTTGT----TAA--ACCGA---TTCGTTGTT---GTTATTGTTGTG-ATATTGAAT------ATTG---TTAAGTGCCTGTTG--CCTG------------------------CTGCT
droBip1 scf7180000396735:311393-311662 - TTCAAGGATGAAGTCGATCCGCACATGGTTGAAGTAGAAGCATTAAACAGGTACGTCC----AT---C--ACTC-TTTCGAGAAGAATCTCC------------------------------------CCAAGAATCT--------AC----------------------T---ACAAATCCGACTT--------------TCTAAAT---CC-------------AATCC-----AATCCGT---TTCCGCGTGGGTC--GTGTC-------------TTCCATC--TCAACCC--GTCAATTGGCAGAGGTCTCCAAAGGCAAGA---TGGTTCCAA-AA------------CAGA----GTTCTT----------TTA--ACCGA---TTCGTTGTT---GTTATTGTTGTG-AT-------------ATTG---TTAAGTGCCTGTTG--CCTG------------------------CTGCT
dp5 3:8037718-8037979 - dps_1094 TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGCC----TT-----------------------------------------------------------------------------------------------------------CGAATCAATTCAATG-------------------------------CTGTTTCCAAATCT--AATATTTTAT---CGCCCT--------GGTGTCGT----------A---TCTA--TCATCGT--GTGAATTGGCAGAGGTCTAGAAAGGCAAGA---AA-TCTCAATCA------------AAAT-------CTC----GTTAGTGCG--TTCGTTCGTTCGTTGTTCACGTTA----TGTG--T-------------ATTT---TTAAGTGCCTGATA--TCTGATACCTGATACCTGATCACTGGATCTACT
droPer2 scaffold_4:1951221-1951475 - TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGCC----TT-----------------------------------------------------------------------------------------------------------CGAATCAATTCAATG-------------------------------CTGTTTCCAAATCT--AATATTTTAT---CGCCCT--------GGTGTCGT----------A---TCTA--TCATCGT--GTGAATTGGCAGAGGTCTAGAAAGGCAAGA---AA-TCGCAATCA------------AAAT-------CTC----GTTAGTGCG--TTCGTTCGTTCGTTGTTCACGTTA----TGTG--T-------------ATTG---TTAAGTGCCTGATA--TCTGATA-------CCTGATCACTGGATCTACT
droWil2 scf2_1100000004822:1447500-1447790 + TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTGAGTAA----ACCCCCT-ACCCTTTTCG------------------------------------------------------------------AT----------------------TTG---AAATTGGAATT--------------CTTAACTGAACTAATGTA-T------TTCA-----TTATCGT---TATCGCGTATTTGCGGTATT---------------CAACA--TCGACTCGTGTGAATTGGCAGAGGTCTAGAAAGGCAAGAAA-TAGTTCCGA-AAACAAAAAAAAAAAA-AATAAATTGTT----------GAA--ACTGTTCAATCGTTGTT---GTTATTGTCTTT-ATAT--ATATCTACTTACT---TTAAGTGCCTTGAT------------------------------CTGAA
droVir3 scaffold_12875:6312574-6312818 + TTCAAGGACGAAGTCGATCCGCATATGGTCGAAGTAGAAGCATTAAACAGGTAAGCTTTAAATTGCTT-----------GAA------------------------------------------------------------------AAT---------TTCAATTCTC------------ATATCTAATAATTTG------------TAAT-------------AATGA--TATATATCAA---CGCCGTGTT--T---GTGTGG-------------TCTACC--TTCAATCGTA-CAATTGGCAGAGGTCTAGAAAGGCAAGA---TAGTTTCAA-AA---------------T-------TTC----GTACGTTCTCTATTGTTCGTTCGTAATT---G------TTGTGT---------------ACAT---TTAAGAGCCT------------------------------------GCA
droMoj3 scaffold_6496:23716890-23717138 - TTCAAGGACGAAGTCGATCCGCATATGGTCGAAGTAGAAGCATTAAACAGGTAAGTTTTGAATTTCTT-----------AAA------------------------------------------------------------------ATTAATTTTAG-TTCAATTCTC------------ATATCTTATAATCTG------------TAATAAT------GATAAA-----------TCAA---CGACGTAT--TTGTGTGGTC----------------TACC--TACAATCGTA-CAATTGGCAGAGGTCTCGAAAGGCAAGA---TAGTTTCAA-AA---------------T-------TTC----GTACGTTCTTTATAGTTCGTTCGCTGTT---A------CTGTGT---------------AAAT---TTAAGTGCCTG--------------------------------------
droGri2 scaffold_15112:1200121-1200377 + TTCAAGGACGAAGTCGATCCGCATATGGTCGAAGTAGAAGCATTAAACAGGTAAGCTT----TG---TT-A------T------------------CATA--TGTATATATATAGACC-----T----------------------GTATT--------ATG--AAACTC------------TTA-------------------------------------------TCT--AATAATCTGT---TAACGTAT--TT------TA--ACGTATGGTGG-TCTTCCATTCAAC-------AATTGGCAGAGTTCTAGAAAGGCAAGATACTAGTTGCAA-AA---------------T-------TTC----GTACGTTCT--ATCGTTCGTTCCTT-TTGATGTT--TGTTGTG---------T------ACTG---TTAAGTGCCTGCA-------------------------------TTGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGCC----TT---CT-A------T-----------------A--TA--------TATATATATT-----C--------------TTATTCAA------------------------TCGAATCTATTTAAATT-----------------------------------TAAAAATCT--AATGTTCCAT---TGCCGT--------GGTGTC----------------TATC--TCAACTT--GTGAATTGGCAGAGGTCTCAAAAGGCAAGA---TAGTTTCAA-AA------------AAGT-------CTA------------G--TTCGTTCGTGCGTTGTT---G------TTGTGAATATTGATT------ACAT---TTAAGTGCTTGCAA------------------------------CTGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................................................................................................................................GTTCGTGCGTTGTT---G------TTG..........................................................................1812.00220000000000000000
.........................TGGTTGAAGTAGAAGCATTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
............................TTGAAGTAGAAGCATTAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
.................................GTAGAAGCATTAAACAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
......GATGAAGTCGATCCGCATATGGTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000100000
.......................TATGGTTGAAGTAGAAGCATTAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
...................CGCATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
....................GCATATGGTTGAAGTAGAAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
......................ATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000001000
..................................................................................................................................................................................................................................................................................................................................................A-AA------------AAGT-------CTA------------G--TTCGTTCGTGC.............................................................................................2211.00100100000000000000
...........AGTCGATCCGCATATGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.20100100000000000000
................................................................................................................................................................................................................................AAAATCT--AATGTTCCG.....................................................................................................................................................................................................................................................1680.13100000000001000000
droSec2
TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGACC----TT---CT-A------T-----------------A--TA--------TATATATAT-----AC--------------TTATTCAA------------------------TCGAAACTATTTAAATT-----------------------------------TAAAAATCT--AATGTTCCAT---TGCCGT--------GGTGTC----------------TATC--TCAACTT--GCGAATTGGCAGAGGTCTCAAAAGGCAAGA---TAGTTTCAA-AA------------AAGT-------CTA------------G--TTCGTTCGTGTGTTGTT---G------TTGTGAATATTGATT------ACAT---TTAAGTGCTTGCAA------------------------------CTGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..CAAGGATGAAGTCGATCCGCATATGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030210
......................ATATGGTTGAAGTAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
......................ATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.........GAAGTCGATCCGCATATGGTTGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
...............GATCCGCATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
.TCAAGGATGAAGTCGATCCGCATATGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
..................CCGCATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
......GATGAAGTCGATCCGCATATGGTTGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
dm3
TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGCC----TT---CT-A------T-----------------A--TATATTTATATATATATATT-----C--------------TTATTCAA------------------------TCGAATCTATTCAAATT-----------------------------------TAAAAATCT--AATGTTCCAT---TGCCGT--------GGTGTC----------------TATC--TCAACTT--GTGAATTGGCAGAGGTCTCAAAAGGCAAGA---TAGTTTCAA-AA------------AAGT-------CTA------------G--TTCGTTCGTGCGTTGTT---G------TTGTGAATATTGATT------ACAT---TTAAGTGCTTGCAA------------------------------CTGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................TATGGTTGAAGTAGAAGCATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....AGGATGAAGTCGATCCGCATAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010300000000
..................CCGCATATGGTTGAAGTAGAAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GTAGAAGCATTAAACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000010010000000000000000000000000
.......ATGAAGTCGATCCGCATAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATGGTTGAAGTAGAAGCATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000020000000000000000000000000
...AAGGATGAAGTCGATCCGCATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GATCCGCATATGGTTGAAGTAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.......................TATGGTTGAAGTAGAAGCATTAAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATATGGTTGAAGTAGAAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000
........TGAAGTCGATCCGCATATGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
..CAAGGATGAAGTCGATCCGCATAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TATGGTTGAAGTAGAAGCATTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000000
...........AGTCGATCCGCATATGGTTGAAGTAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATATGGTTGAAGTAGAAGCATTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
....................GCATATGGTTGAAGTAGAAGCATTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................CATATGGTTGAAGTAGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................ATTGGCAGAGGTCTCAAAAGGCAA..................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................ATATGGTTGAAGTAGAAGCATTATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CGATCCGCATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TCTCAAAAGGCAAGA---TAGTTTCAA-AA------------AAG..................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AGTCGATCCGCATATGGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TATGGTTGAAGTAGAAGCATTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................AGTAGAAGCATTAAACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CGCATATGGTTGAAGTAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................ATCCGCATATGGTTGAAGTAGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CAAGGATGAAGTCGATCCGCATATGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.TCAAGGATGAAGTCGATCCGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................ATC--TCAACTT--GTGAATTGGCAGATC...............................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CAAGGATGAAGTCGATCCGCATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CGCATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................CATATGGTTGAAGTAGAAGCATTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.............................TGAAGTAGAAGCATTAAACAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...AAGGATGAAGTCGATCCGCATATGGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..CAAGGATGAAGTCGATCCGCATATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TGGTTGAAGTAGAAGCATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CAAGGATGAAGTCGATCCGCATATGGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................GCATATGGTTGAAGTAGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........AAGTCGATCCGCATATGGTTGAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CAAGGATGAAGTCGATCCGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GGTTGAAGTAGAAGCATTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.TCAAGGATGAAGTCGATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................GAAGTAGAAGCATTAAACAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGGATGAAGTCGATCCGCATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGGATGAAGTCGATCCGCATATGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TC--TCAACTT--GTGAATTGGC....................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TC----------------TATC--TCAACTT--GTGAATTGGCAGT.................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...........................GTTGAAGTAGAAGCATTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TTCAAGGATGAAGTCGATCCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATATGGTTGAAGTAGAAGCATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTCGTGCGTTGTT---G------TTGTGAATA....................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ATCCGCATATGGTTGAAGTAGAAGCATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TA------------G--TTCGTTCGTGCGTTGTT---G------TG...........................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..............CGATCCGCATATGGTTGAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATGGTTGAAGTAGAAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CCGCATATGGTTGAAGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................ATATGGTTGAAGTAGAAGCATTAAACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................CGTTCGTGCGTTGTT---G------TTG..........................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................GT-------CTA------------G--TTCGTTCGTGCG............................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTCAAGGATGAAGTTGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGCC----TT---CT-A------T-----------------TGATA----------------TTTCT-TC--------------TTATTCAA------------------------TTGAATCAATTCAAATT-----------------------------------TATAAATCT--AATGTTCCAT---TGCCGT--------GGTGTC----------------TATC--TCAACTT--GTGAATTGGCAGAGGTCTCAAAAGGCAAGA---TAGTTTCAA-AA------------AAGT-------CTA------------G--TTCGTTCGTGCGTTGTT---G------TTGTCAATATTGATT------ACTA---TTAAGTGCTTGCAA------------------------------CTGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................GCATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
....................GCATATGGTTGAAGTAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001000
...........AGTTGATCCGCATATGGTTGAAGTAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
......GATGAAGTTGATCCGCATATGGTTGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
.............TTGATCCGCATATGGTTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
......................ATATGGTTGAAGTAGAAGCATTAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
..................CCGCATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000
....................GCATATGGTTGAAGTAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
...........................GTTGAAGTAGAAGCATTAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
.............................................................................................................................................................................................................................................................................................................................................................................CTA------------G--TTCGTTCGTGCGTTGTT---G------TT...........................................................................2411.0010000010
...............GATCCGCATATGGTTGAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
droYak3
TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTACGGTT----CT---TT-A-------------------------GATA----------------TATTT-TC--------------TTATTCAA------------------------TCGAATCAATACAAATT-----------------------------------TATAAATCT--AATGTTCCAA---TGCCGT--------GGTGTC----------------TATC--TCAACTT--GTGAATTGGCAGAGGTCTCAAAAGGCAAGA---TAGTTTCAA-AA------------AAGT-------CTA------------A--TTCGTTCGTGCGTTGTT---G------TTGTGAATATTGATT------ACTT---TTAAGTGCTTGCAA------------------------------CTGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........AGTCGATCCGCATATGGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
..........AAGTCGATCCGCATATGGTTGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
..CAAGGATGAAGTCGATCCGCATATGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
..............CGATCCGCATATGGTTGAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
......GATGAAGTCGATCCGCATATGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
......GATGAAGTCGATCCGCATATGGTTGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
.TCAAGGATGAAGTCGATCCGCATATGGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
.......ATGAAGTCGATCCGCATATGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...............GATCCGCATATGGTTGAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...............GATCCGCATATGGTTGAAGTAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
droEug1
TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGTC----TT---CT-A------G-------------------------------------------TAGAGATTTAA------GGATTCTT------------------------TTGACTTTATTCAAATT-----------------------------------TATAAATCT--AATATTCCAT---TGCCGTGTG----TGGTGTC----------------TATC--TCAACTT--GTGAATTGGCAGAGGTCTCAAAAGGCAAGA---TAGTTTCAA-AA---------AG-AATT-------ATAGTTCGT----TCG--TTCGTTCGTTC---GTT---G------TTGTGAATAT---TT------ACTG---TTAAGTGCCTGCTA------------------------------CTGCASizeHit CountTotal NormTotal
No Reads
droBia1
TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGTC----TC---TA-A-------------------------GATA----------------TTTTT-----------------AAATACAA------------------------TCGACTCTATTCAAATT-----------------------------------TAAAAATCG--AATATTCCAT---TATCAT--------GGTGTC----------------TATC--TCAACTT--GTGAATTGGCAGAGGTCTCAAAAGGCAAGA---TAGTTTCCA-AA------------AAAT-------TCA------------G--TTTGTTCGTTAGTTGTG---G------TTGTGAATAT-GATA------ACT----GTAACTGCCTGCTT------------------------------CTGCASizeHit CountTotal NormTotal
No Reads
droTak1
TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGTC----TT---CT-T-------------------------GGTA----------------TTCTT-TG--------------GGCTTCAA------------------------TCGACTGTATTTAAATT-----------------------------------TACAAATTT--AATATTCTAT---TGCCGT--------GGTGTC----------------TATC--TCATCGT--GTGAATTGGCAGAAGTCTCAAAAGGCAAGA---AAGTT-CAA-AA------------AAGT-------CTAATTC--------G--TTCGTTCGTTCGTTGTT---G------TTGTGAATATTGATT------ACTC---TTTAATGCCTGCTA------------------------------ATGCASizeHit CountTotal NormTotal
No Reads
droEle1
TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTTGAAGCATTAAACAGGTGAGGTG----G-----------------------------------TA----------------TTTTT-AA----TATA------GGATTCAA------------------------TGAAATTTATTCAAAAT-----------------------------------TATAAATCT--AATATTTCAA---TGCCGT--------GGTGTC----------------TATC--TCAACTT--GTGAATTGGCAGATGTCTCAAAAGGCAAGA---AAGTTTCAA-AA------------AAGT-------CTC------------G--TTTGTTATTTAGTTTTT---G------TTGTGAATATTGATA------ATTG---TTAAGTGTCT------------------------------------GCASizeHit CountTotal NormTotal
No Reads
droRho1
TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGTC----TT---C--A---------------------------TA----------------TTTTGTAC--------------AGATTTAA------------------------TCGACTCTTTTTAAAAT-----------------------------------TATAAATCT--AATATTTCAA---TGCTGT--------GGTGTC----------------TATC--TCATCTT--GTGAATTGGCAGAGGTCTTAAAAGGCAAGA---TAGTTTCAA-AA------------AAGT-------TTC------------G--TTTGTTCTTTAGTTGTT---G------TTGTGAATATGGATA------ATTA---TTAAGTGCCT------------------------------------GCASizeHit CountTotal NormTotal
No Reads
droFic1
TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGTT----TT---CC-T-------------------------TTTG----------------C-----------TCAT------GGATTTAA------------------------TCACTTCTATTCAAATT-----------------------------------ATAAAATCT--AATATTCCAT---TGCCGT--------GGTGTC----------------TATC--TCAACTT--GTGAATTGGCAGAGGTCTCAAAAGGCAAGA---TAATTCCAA-GA----------G-AAAT-------CTT------------G--TTCGTTCGTTCGTTGTT---G------TTGTGAATATTGATT------ATTG---TTAAGTGCCTGCT-------------------------------TTGCASizeHit CountTotal NormTotal
No Reads
droKik1
TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGAA----TTGCTTTCATTC---------------T------------------------------------------------------CC------------------------GCGAATCACTTTAAATCT------CTGAAATA--------------------TAT-AATCTATAATTTTCCATTGATGCCGTGT------GGTGTCG---------------TATC--GCAACGT--GTGAATTGGCAGAGGTCTCCAAAGGCAAGA---TAGTTTCCA-AA------------A-TT--C---TCTC------------G--TTCGTTCGTTCGTTG------------TTGTGAATATTGAAT------AGTGTTATTAAGTGCCTGCTAATGCTG------------------------CTGCASizeHit CountTotal NormTotal
No Reads
droAna3
TTCAAGGATGAAGTCGATCCGCACATGGTTGAAGTAGAAGCATTAAACAGGTATGTCT----GTCCTATAATCC---------------TCCCTAAGATC----------------T-----------------------------AT----------------------T---ATATATCCGACTT--------------TCTAAAT---CC-------------AATCA-----ATTCCGT---TTCCGCGTGGGTC--GTGTC-------------TTCCATC--TCAACTC--GTGAATTGGCAGAGGTCTCCAAAGGCAAGA---TGGTTCCAA-AA------------AAGT-------TAAATTTGT----TAA--ACCGA---TTCGTTGTT---GTTATTGTTGTG-ATATTGAAT------ATTG---TTAAGTGCCTGTTG--CCTG------------------------CTGCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................CGCACATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
....................GCACATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
..............CGATCCGCACATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.................TCCGCACATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..........AAGTCGATCCGCACATGGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
.........GAAGTCGATCCGCACATGGTTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...............GATCCGCACATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
TTCAAGGATGAAGTCGATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
droBip1
TTCAAGGATGAAGTCGATCCGCACATGGTTGAAGTAGAAGCATTAAACAGGTACGTCC----AT---C--ACTC-TTTCGAGAAGAATCTCC------------------------------------CCAAGAATCT--------AC----------------------T---ACAAATCCGACTT--------------TCTAAAT---CC-------------AATCC-----AATCCGT---TTCCGCGTGGGTC--GTGTC-------------TTCCATC--TCAACCC--GTCAATTGGCAGAGGTCTCCAAAGGCAAGA---TGGTTCCAA-AA------------CAGA----GTTCTT----------TTA--ACCGA---TTCGTTGTT---GTTATTGTTGTG-AT-------------ATTG---TTAAGTGCCTGTTG--CCTG------------------------CTGCTSizeHit CountTotal NormTotal
No Reads
dp5
TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGCC----TT-----------------------------------------------------------------------------------------------------------CGAATCAATTCAATG-------------------------------CTGTTTCCAAATCT--AATATTTTAT---CGCCCT--------GGTGTCGT----------A---TCTA--TCATCGT--GTGAATTGGCAGAGGTCTAGAAAGGCAAGA---AA-TCTCAATCA------------AAAT-------CTC----GTTAGTGCG--TTCGTTCGTTCGTTGTTCACGTTA----TGTG--T-------------ATTT---TTAAGTGCCTGATA--TCTGATACCTGATACCTGATCACTGGATCTACTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................ATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000013
...................CGCATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000002
....................GCATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000100001
..................CCGCATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000001
..............CGATCCGCATATGGTTGAAGTAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.............TCGATCCGCATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
...................CGCATATGGTTGAAGTAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACCTGATACCTGATCACTGG.......2311.0010100000000
....................GCATATGGTTGAAGTAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000001
....................GCATATGGTTGAAGTAGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000001
..............................................................................................................................................................................................................................................................................................................TTGGCAGAGGTCTAGAAAG......................................................................................................................................................................1911.0010100000000
..................CCGCATATGGTTGAAGTAGAAGCATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
droPer2
TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTAAGGCC----TT-----------------------------------------------------------------------------------------------------------CGAATCAATTCAATG-------------------------------CTGTTTCCAAATCT--AATATTTTAT---CGCCCT--------GGTGTCGT----------A---TCTA--TCATCGT--GTGAATTGGCAGAGGTCTAGAAAGGCAAGA---AA-TCGCAATCA------------AAAT-------CTC----GTTAGTGCG--TTCGTTCGTTCGTTGTTCACGTTA----TGTG--T-------------ATTG---TTAAGTGCCTGATA--TCTGATA-------CCTGATCACTGGATCTACTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................GTAGAAGCATTAAACAGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........AGTCGATCCGCATATGGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATA-------CCTGATCACTGGAT.....1811.001100000
....................GCATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.....................................................................................................................................................................................................................................................................................................GT--GTGAATTGGCAGAGGTCTA...........................................................................................................................................................................2111.001000001
..............CGATCCGCATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.................TCCGCATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
droWil2
TTCAAGGATGAAGTCGATCCGCATATGGTTGAAGTAGAAGCATTAAACAGGTGAGTAA----ACCCCCT-ACCCTTTTCG------------------------------------------------------------------AT----------------------TTG---AAATTGGAATT--------------CTTAACTGAACTAATGTA-T------TTCA-----TTATCGT---TATCGCGTATTTGCGGTATT---------------CAACA--TCGACTCGTGTGAATTGGCAGAGGTCTAGAAAGGCAAGAAA-TAGTTCCGA-AAACAAAAAAAAAAAA-AATAAATTGTT----------GAA--ACTGTTCAATCGTTGTT---GTTATTGTCTTT-ATAT--ATATCTACTTACT---TTAAGTGCCTTGAT------------------------------CTGAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................GCATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200110
..................CCGCATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
............GTCGATCCGCATATGGTTGAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
..............CGATCCGCATATGGTTGAAGTAGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
.................................GTAGAAGCATTAAACAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
.........GAAGTCGATCCGCATATGGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
......GATGAAGTCGATCCGCATATGGTTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.........GAAGTCGATCCGCATATGGTTGAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
...........AGTCGATCCGCATATGGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
......................ATATGGTTGAAGTAGAAGCATTAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
.....................CATATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.......................TATGGTTGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
........TGAAGTCGATCCGCATATGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
......................ATATGGTTGAAGTAGAAGCATTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
........TGAAGTCGATCCGCATATGGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
......GATGAAGTCGATCCGCATATGGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
..CAAGGATGAAGTCGATCCGCATATGGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
droVir3
TTCAAGGACGAAGTCGATCCGCATATGGTCGAAGTAGAAGCATTAAACAGGTAAGCTTTAAATTGCTT-----------GAA------------------------------------------------------------------AAT---------TTCAATTCTC------------ATATCTAATAATTTG------------TAAT-------------AATGA--TATATATCAA---CGCCGTGTT--T---GTGTGG-------------TCTACC--TTCAATCGTA-CAATTGGCAGAGGTCTAGAAAGGCAAGA---TAGTTTCAA-AA---------------T-------TTC----GTACGTTCTCTATTGTTCGTTCGTAATT---G------TTGTGT---------------ACAT---TTAAGAGCCT------------------------------------GCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..CAAGGACGAAGTCGATCCGCATATGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.003001100000000000000000000000000000000100000000000000000000000000
...................CGCATATGGTCGAAGTAGAAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
.................TCCGCATATGGTCGAAGTAGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
....AGGACGAAGTCGATCCGCATATGGTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000100000000000000000000000000000000
.................................GTAGAAGCATTAAACAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
........CGAAGTCGATCCGCATATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000010000000000000000000000000000000
...................CGCATATGGTCGAAGTAGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000100000000000000000000000000000
....................GCATATGGTCGAAGTAGAAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...............GATCCGCATATGGTCGAAGTAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000100000000000000000000000000000000000000000000000
.......................TATGGTCGAAGTAGAAGCATTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
.................................GTAGAAGCATTAAACAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.331000000000000000000000000000001000000000000000000000000000000000
droMoj3
TTCAAGGACGAAGTCGATCCGCATATGGTCGAAGTAGAAGCATTAAACAGGTAAGTTTTGAATTTCTT-----------AAA------------------------------------------------------------------ATTAATTTTAG-TTCAATTCTC------------ATATCTTATAATCTG------------TAATAAT------GATAAA-----------TCAA---CGACGTAT--TTGTGTGGTC----------------TACC--TACAATCGTA-CAATTGGCAGAGGTCTCGAAAGGCAAGA---TAGTTTCAA-AA---------------T-------TTC----GTACGTTCTTTATAGTTCGTTCGCTGTT---A------CTGTGT---------------AAAT---TTAAGTGCCTG--------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..CAAGGACGAAGTCGATCCGCATATGGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002000002
................ATCCGCATATGGTCGAAGTAGAAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
................ATCCGCATATGGTCGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
........................................................................................................................................................................................................................................................................................................................................................................................GTTCTTTATAGTTCGTTCGCT..........................................................................................2111.001100000
....................GCATATGGTCGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
TTCAAGGACGAAGTCGATCCGCATATGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000001
.............................CGAAGTAGAAGCATTAAACAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........CGAAGTCGATCCGCATATGGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.....................CATATGGTCGAAGTAGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
droGri2
TTCAAGGACGAAGTCGATCCGCATATGGTCGAAGTAGAAGCATTAAACAGGTAAGCTT----TG---TT-A------T------------------CATA--TGTATATATATAGACC-----T----------------------GTATT--------ATG--AAACTC------------TTA-------------------------------------------TCT--AATAATCTGT---TAACGTAT--TT------TA--ACGTATGGTGG-TCTTCCATTCAAC-------AATTGGCAGAGTTCTAGAAAGGCAAGATACTAGTTGCAA-AA---------------T-------TTC----GTACGTTCT--ATCGTTCGTTCCTT-TTGATGTT--TGTTGTG---------T------ACTG---TTAAGTGCCTGCA-------------------------------TTGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 12:47 PM