ID:dsi_11617 |
Coordinate:3l:16375066-16375127 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3l_16374734_16375065_-]; CDS [3l_16374734_16375065_-]; CDS [3l_16375128_16375261_-]; exon [3l_16375128_16375261_-]; intron [3l_16375066_16375127_-]
No Repeatable elements found
| ##################################################--------------------------------------------------------------################################################## CGGGTAAACCAGAGCATGTTATCAACTTCTTCTTCATGCTGGCCGAGGATGTAAGCTTTTATTTCCCATAGCTTCTATAAATTAGACTAATCACTTGACTTTTTTTAAATAGATTCGCAAAATCATGGCTGGATTGGGAATTCGAAAGTTCCAGGATCTGAT **************************************************..(((((............)))))......................................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M024 male body |
SRR902009 testis |
M053 female body |
SRR553486 Makindu_3 day-old ovaries |
O001 Testis |
SRR553485 Chicharo_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................TGGCTGGATTGGGAATTCGAAAGT............. | 24 | 0 | 1 | 3.00 | 3 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..................................................................................................................TCGCAAAATCATGGCTGGATTGGGCATT.................... | 28 | 1 | 1 | 3.00 | 3 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................................................................CGCAAAATCATGGCTGGATTGGGCATT.................... | 27 | 1 | 1 | 3.00 | 3 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................................................................................................ATTCGAAAGTTCCAGGATCTGAT | 23 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................................................................GAAAGTTCCAGGATCTGAT | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................ATATTCGCAAAATCATGGCTGGA............................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................................TGGCTGGATTGGGCATTCGAAAGTTCAA......... | 28 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................................TATTCGCAAAATCATGGCTGGATTGGGA....................... | 28 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................................................................................CATGGCTGGATTGGGAATTCGAAA............... | 24 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................................TGGCTGGATTGGGAATTCGAAAGTTCC.......... | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................................AATCATGGCTGGATTGGGA....................... | 19 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................GGATTGGGAATTCGAAAGTT............ | 20 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................................................GCTGGATTGGGAATTCGAA................ | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ......................................................................................................................................TGGGCATTCGAAAGTTCCAGGATCTGAT | 28 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...............................................................................................................................................GAAAGTTCCAGGATCT... | 16 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................................................................................GCTGGATTGGGAATTCGAAAGTTC........... | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......ACCGGAGAATGTTATCA.......................................................................................................................................... | 17 | 2 | 14 | 0.07 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................................................................................................TTCGAAATTTCCAGGACC.... | 18 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .......ACCGGAGAATGTTATC........................................................................................................................................... | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .............................................................................................................................TGGCTTGATTGGGAA...................... | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................................................TCAGTTGGCTTTTTTTATATA................................................... | 21 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................GGCTTGATTGGGAATTT................... | 17 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .....................................GCTGGACGAGGTTGTA............................................................................................................. | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ...................................ATTCTGGCCGAGGAT................................................................................................................ | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
|
GCCCATTTGGTCTCGTACAATAGTTGAAGAAGAAGTACGACCGGCTCCTACATTCGAAAATAAAGGGTATCGAAGATATTTAATCTGATTAGTGAACTGAAAAAAATTTATCTAAGCGTTTTAGTACCGACCTAACCCTTAAGCTTTCAAGGTCCTAGACTA
**************************************************..(((((............)))))......................................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553488 RT_0-2 hours eggs |
SRR553487 NRT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|
| ...........................................................ATAAAGGGTATCGAAGT...................................................................................... | 17 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| .........................................................CCATAAAGGGTATCGAAG....................................................................................... | 18 | 2 | 8 | 0.13 | 1 | 1 | 0 | 0 | 0 |
| ...................................................................................................AAAAAAATTTTTCTTAGCGT........................................... | 20 | 2 | 9 | 0.11 | 1 | 0 | 1 | 0 | 0 |
| ...............................................................AGGGTATCGAAGCCATTA................................................................................. | 18 | 3 | 20 | 0.10 | 2 | 0 | 0 | 2 | 0 |
| ..........................................................................................................................AGGACCGACATAGCCCTTA..................... | 19 | 3 | 15 | 0.07 | 1 | 0 | 1 | 0 | 0 |
| .....................................................TCGAAAGTAAAGGGT.............................................................................................. | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 |
Generated: 04/24/2015 at 04:26 AM