ID:

dsi_1154

 Coordinate:

3r:7638870-7639137 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.2 -10.1 -10.1

Flybase annnotation

CDS [3r_7638742_7638868_+]; five_prime_UTR [3r_7639133_7639195_+]; exon [3r_7639133_7639306_+]; three_prime_UTR [3r_7638869_7639131_+]; exon [3r_7638742_7639131_+]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

########################################################################################################################################################################################################################################################################################################################-#######################################################
ACAGATCGCAATGAGTGCTAAGTCCGAAAAAGATTCCAAAAATAAATAAGGTACAAATGTTTTATTTTTAATTGTTGTAATCCGTTTAGAGACCTAATGTTCTTATCTGTTAACAATTGTAATAGTATAAAATTATTTCTAAGAATTTAATAAGATTAAATATCATAATATATTTGACTGTGATTTGGGTGTATCGATCAGTTTTAAAAGTGGATATCTCATCCTCTTAAATATTTTGCGTGAGAAGAACTAATAACTTGTAGCTCACTTTAAAATTTGCCATTCACACAAAACAATGATAAACTATTCTGTAAACAGAAGTCCAACTTTGTTTACTTGGTGAAACCTAAACAATTGAGTTGAAACTG
******************************************************************(((((((....(((....((((((((..((((.....((.((((((.......))))))))....))))))))))))...)))....)))))))..************************************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 M023
head
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
............GAGTTCTAAGTCCGAAA................................................................................................................................................................................................................................................................................................................................................... 17 1 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................................................GTATGAAATTATTTTTAAGAAT.............................................................................................................................................................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................TTTAATTGTTGTAATCCGTTTAGAGACC.................................................................................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................TTATTTCTAAGAATTTAATAAGATTAAATA.............................................................................................................................................................................................................. 30 0 1 1.00 1 0 1 0 0 0 0 0 0
..................................................................TTTAATTGTTGTCAGCGGTTTAG....................................................................................................................................................................................................................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0
..........................................TAAATAAGGTCTAAATGTTTTA................................................................................................................................................................................................................................................................................................................ 22 2 2 0.50 1 0 0 0 1 0 0 0 0
............................................................................................................................GTATGAAATTATTTTGAAGAAT.............................................................................................................................................................................................................................. 22 3 10 0.40 4 4 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................TTTGTGTGAGAAGAACGAA................................................................................................................... 19 2 4 0.25 1 0 0 0 0 1 0 0 0
...........................................................................................................................................................................CTTTGACTGTAATTTGGGT.................................................................................................................................................................................. 19 2 4 0.25 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................................TTTGTGTGAGAAGAACGAAGA................................................................................................................. 21 3 7 0.14 1 0 0 0 0 0 1 0 0
............................................................................................................ATTATCAATTGTAGTAGTATA............................................................................................................................................................................................................................................... 21 3 8 0.13 1 0 0 0 1 0 0 0 0
...............TGCTTAGTCCGAAAAA................................................................................................................................................................................................................................................................................................................................................. 16 1 11 0.09 1 0 0 0 0 0 0 1 0
....................................................................................................................................................................................GGATTTGGGTGTATC............................................................................................................................................................................. 15 1 14 0.07 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................TTTTTTGCGAGAGAACAACT..................................................................................................................... 20 3 16 0.06 1 0 1 0 0 0 0 0 0
...............................................................................................AATGTTCTGATCTGCTAAA.............................................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 1 0
.............AGTTCTAAGTCCGACAAC................................................................................................................................................................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 1
.........CAAGAGTTCTAAGTCCGA..................................................................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 1 0 0 0 0 0
.............................................................................................................................TATGAAATTATTTTGAAGAATT............................................................................................................................................................................................................................. 22 3 20 0.05 1 1 0 0 0 0 0 0 0

Anti-sense strand reads

TGTCTAGCGTTACTCACGATTCAGGCTTTTTCTAAGGTTTTTATTTATTCCATGTTTACAAAATAAAAATTAACAACATTAGGCAAATCTCTGGATTACAAGAATAGACAATTGTTAACATTATCATATTTTAATAAAGATTCTTAAATTATTCTAATTTATAGTATTATATAAACTGACACTAAACCCACATAGCTAGTCAAAATTTTCACCTATAGAGTAGGAGAATTTATAAAACGCACTCTTCTTGATTATTGAACATCGAGTGAAATTTTAAACGGTAAGTGTGTTTTGTTACTATTTGATAAGACATTTGTCTTCAGGTTGAAACAAATGAACCACTTTGGATTTGTTAACTCAACTTTGAC
**************************************************************************************************************************************************************************************************************(((((((....(((....((((((((..((((.....((.((((((.......))))))))....))))))))))))...)))....)))))))..****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 SRR553488
RT_0-2 hours eggs
 M023
head
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
.............................................................................................................................................................................................................................................................................................TGTTTTTAGTTACTATTT................................................................. 18 2 20 0.30 6 6 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................AGGGGTGTTTGGTTACTATTT................................................................. 21 3 8 0.13 1 0 1 0 0 0 0
...............................................................................................................................................TTGAATTATGCTAATTTATTG............................................................................................................................................................................................................ 21 3 9 0.11 1 0 0 1 0 0 0
.......................................................................................................................................AAAGATTATTTAATTATTGTAAT.................................................................................................................................................................................................................. 23 3 9 0.11 1 0 0 0 1 0 0
................................................................AAAAATCAACAACATTATG............................................................................................................................................................................................................................................................................................. 19 2 10 0.10 1 1 0 0 0 0 0
...............................................................................................................................................TTGAATTATGCTAATTTAT.............................................................................................................................................................................................................. 19 2 11 0.09 1 0 0 0 0 1 0
...........................................................................................................................................................................................................................................................................................AGTGTTTTTAGTTACTATT.................................................................. 19 2 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:7638820-7639187 + dsi_1154 ACAGATCGCAATG-AGTGCTAAGTCCGAAAAAGA---------------TTCCAAAA----ATAAATAAGGTACAAATGTTTTATTTTTAATTGTTGT------AATC-----CGTTTAGAGACCTAATGTT-CTTATCT-GTTA---------------------------------------ACA-------A----------------------------------TTGTAAT--------AGTATAAA-A-----------TTATTTCTAAGAATTTA------ATAAG-----------------------------------------------ATT-AAATATCATAATATA--------TTTGACT-----GTGATTTGGGTGTATCGATCAGTTTTAAAAGTGGATATCTCATCCTCTTAAATATTTTGCG---------------------------TGAGA-AGAACTAATAACTTGTAGCTCACTTTAAAATTTGCCATTCACAC--------------------------------AAAAC----------AATGATAAAC-----TATTCTGTAA----ACAGAAGTCCAACTTTGTTT------------------ACTT------GG-----TGAAACCTAAACAATTGA------------------GTTGA---AACTG
droSec2 scaffold_12:525213-525504 + AAT--------------------------------------------------------------------------------------------------------A-----CGTTAAGAGACCT---GTT-CTTATCT-GTTA---------------------------------------ACA-------A---------------------------------ATTGTAAGAATGTAATAGAATAAA-A-----------TTATTTCTAAG---TTA------ATAAG-----------------------------------------------ATG-ATATATCAAAATATA--------TCTGACT-----GTGATTT-GGTGTATCAATCAGTTTTAAAAGTGGATATTTCATTCTCTTAAATATTTTGCG---------------------------TCAGA-AGAACTAATTACTTGTAGCTCACTTTAAAATTTGCCATTCACAC--------------------------------AAAAC----------AATGATAAAC-----TATTCTGTAA----ACAGAAGTCCAACTTTGTTT------------------ACTT------GG-----TGAAACCTAAACAATTGA------------------GTTGA---AACTG
dm3 chr3R:13628897-13629300 - GCTGATCGCAATG-AGTGCTAAGTCCGAAATTGA---------------TTCCAAAA----ATAAATAAGGTACAAATGTTTTGTTGTTAAGTGTTGT------CATC-----CGTTTAGAGGTCTAATGTT-CTTATCT-GTTA---------------------------------------A---------A---------------------------------ATTATAATAATTTA---GTATAAA-A-----------GTATTTCTAAGAAGTTA------ATAAG-----------------------------------------------ATG-AAATATCATAAGATA--------TCTGACT-----GTGATTTGGGTGTATCGATCAGTTTTGAAAGTGGATCTTTCATCCTCTTAAATATTTAACGTTTATTACAACAAATCCACAGTTCAAATCGGA-AGAACTAATTCCTTGTAGTTCACTTTAAAATGTGCCATTCACAC--------------------------------AAAAC----------AATGATAAACTAGATTATTCTGTAA----ACAGAAGTCCAACTTTGTTT------------------ACTT------GG-----CGGAAACTAAACAATTGA------------------GTTGA---AACTG
droEre2 scaffold_4770:8000302-8000735 + GGAGTTCGCAACG-AAAGTGAAGTCCGAGAACGA---------------TTCCAAAA----ATAAATAAGGTACAAATAGTTTGTTGTCACGTGCTGC------CATT-----CGTTTAGAGGCTCAACGTT-C-TACCT-GTTA---------------------------------------ACA-------AATAAGAGCGCTTTTTAAGTGCAATTTCCGACACATTATATTAATATAGTAGTAGGAA-AGGCAAATGCTAGATTTTCTAAGATATCA------ATAAG-----------------------------------------------ATA-AAATATCCTAATATA--------T------------------AGGTGTACTTATCACTTTTGAAAGTGTATGTTGAATCGAGTAAAATATTTAGACTTTATTAATTCAA----ACAGTTCAAATCAGA-AGAACTAATAACTTGTAGCTCACTGTAA-ATGTGCCATTCACAC--------------------------------AAAAC----------AGTGATAAACAACATTATTTGGTAA----ACACAAGTCCAACTTTGTTT------------------ACTT------GA-----ACAAAACTATAAAATTTT------------------GTTGA---AACTA
droYak3 3R:2210116-2210494 - GGTGACCGCAGGG-AGTGTTAAGTCCGAGAACGA---------------TTCAAAAA----AGAAATGAGGTACAAATAGTTTGTTGTCAAGTGCTGC------CACT-----CGATTAGAGGCTCAACGTT--TTACCT-GTTA---------------------------------------GGAA------AATAGGAGCGCTTTTTAAATGCAATTTGCGACAATGTATAGTAATATAG-AGTAGGAA-AGGCTAATGCTAGAAGTTTTAAGATATTA------ATAAG-----------------------------------------------AAAAAAATATCGAAATATT--------------------------TGGCTGTACTTATTACTTTTGAAA-------------------------------------------------------------AA-AGAAGTTGTTACTTGTAGCCCACTTTAAAATGTGCCATTCACAC--------------------------------AAAAC----------AATGATAAACGACATTGTTTGTCAA----ACAAAAGTCCAACTTTGTTT------------------ACTT------GA-----ACAAAATTATAAAATTTA------------------ACTTA---AATTA
droEug1 scf7180000409562:153477-153866 - GAAGAACATAATA-AATTTAGA---------------------------------------------AAAATTAAATAAATTTTCTGCCAAATGTTAAAATTTTAAATCAAATCGTTACGTAGTCAAAAAGGTTTGTTTTAAGCA------------------------AAACTATAACTTCAAGCAATTTTGC----------------------------------------------TA---AAT-AAAAC-----------TGATTAAAAAC---TTAAGAAAAA--------ATGTAATCTGGCGAAAAGCTATAAAAATAAGGAGATA---------------------------------------------------------------TCGATAAGGATGGCGCGGGTTCAGTTGG--AAACTATCATCAA---------------------------TCTGATGGGGATAATAATATGTTGCACAGTGTTG-TTTTGCCATTCAGAAGGAACGGGCCTAA----TTCTATCATGCACATAGGAGTACC--ATTCG--------------TTTTTGGTAA----ACAATTGACC-ACTCTGCTTAAA-TGAATAAATAA-ATC-A-TT----------------------------------------TAAAATTGGCC-GG-AA-GT
droBia1 scf7180000302113:3780038-3780403 + AGAGTTGGAGTTC-AATAGCAGATCCAAAAACAA---------------GATTTCAG----TTAAATGAGGTACTCTACATTTGTTGACAAGTGTTAAATCTGTCAAT-----GACCACGAAAGCTAATGTA-TTTTTTTCAACA---------------------------------------G---------A---------------------------------ACAACCACGGTTTG---AAT-AAAAC-----------CTGTTTTTAAT---TCAAGTAAACTAAGATCAAATTGTTTAAGCTGAGAGATGTAACAAAAAAGGGGTT---------------------------------------------------------------TCTCTCTCGAAGATGCATGTT----------------------------------------------------------------------TTTTTCAGTATTAAATTTGCCATTCCCATGGAGACGTCTGTATGT-TTTAGCCATTCCCAAACCAC-G-GCGCCACAG-----------------TGGTAA----ACAGGAGAGC---TTGAG-G-----------------AATT-TAGTT-TA-----CCAAAACAATATAACTTG------------------TTTTT---AATCA
droTak1 scf7180000415417:569841-570176 - AGAGTTGGAGGCAAAACGTTAAATCCCAAAACAG---------------TTTTTAAT----TAAAATAAAT----------------------------------------------TTTTAAGTTAT---------------AAATAATTTTTTTAAAAAGCTGACAAAATGTCTAATTGTAAATA-------A----------------------------------A---------------------------------------TTTTA-----------------------------------------------AAACAACGGTATTTCGAAAAAATATATGTCCAAATATTAAAATAAATAAATCTTTTACAAAATTTGAAT-----------------------------------------------------------------------------------------------TTGTTGGGCAGTGTTC-ATTTGTCATTCACAATAGGTAACCTGCA----TCTTGTCATTCACGCAAAAGGGTA--ACTGC--------------TAACCAGTAA----ACAAACATT--ACTCTGGTAAAA-AGAATTAATGAAAAA-T-TATCT-TA-----CAAAGCC--------------------ATTAAAGAAGTCAG---AAAGA
droEle1 scf7180000491080:2649171-2649300 + ACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAACGCGTCGCCTGCAATATTTTAGCCATTTACTGAGAAGCGTT--ATTCT--------------TTTCTGGTAA----ACAGAAGTGC-TCTCTTCAAATA-ATAACAAATAT-TAA-A-TT-------------TAAGGAAAGAAAGAAA-----------------GGACC-TT-GG-AA
droRho1 scf7180000777768:2963-3088 + AAGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACATTTTTGTAGCCCGGTGTTAAATTTGTCATTCACAAGGCGTCGACTGCAATA-TTTCGTCATTTACCCAGAAGCG------GTT--------------TTTTTGGGTA----ACAAAAGACC-----------------------------------------------------AACAAATTAA------------------ATTGA---AAGTA
droFic1 scf7180000453912:1845340-1845670 + AGTGGTTTCAAAA-AT---TGAGCGCAAAAGGAGTTAGAACAACGGAAATTCGGAAATGAAACTACTAAGAGGC--------------------TTATAATAATTTTTCAAATAAATATTTATTCAAG-----------------AAAATGTTTTTTAATTGCCGAAAGCATCCATAATTTTAGTCACTTAAGC----------------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAATTACCTTTATACCAACTATTT----------------------------------------------------TTTTTCAGTGTTC-ATTCGCCATTCACAACT---CATCTGCAA---TTTTAACATTCACCCAGAAGGAAG--CCACT--------------TCTATGGTAA----ACAAAAGACGATCTCAGCGTAAATTCAATAAACAA-AAC-T-TATCTTGG-----TCGAAAAGGAGCAAGTAG--------------------GGG---ACCAG
droKik1 scf7180000302276:705507-705647 + TTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTCGCCATTCTCATGGACACG----CAG---CCAGGCCATTCGCCACGAAGCG------GCT--G-----------ATGTTTGTAA----ACAGAAGAACAACTCTGTTTTT----------------GTTT------GG-----AAGTGAAAAACAAAA-TAAATGAAGCAATTTTCGTTGACG-GGAAA-CT
droAna3 scaffold_13340:10774113-10774199 + TAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTGCCATTCACTT-------------------------------------------------TG-----------CACTTGACAAACAAAGAAA---ATAACTCATT-A-----------------AGTC-AGG------TAT-CTCAAAATAAACAACTTC--------------------ATA---AACTG
droBip1 scf7180000396374:309377-309464 - TAGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCCATTCACCT-------------------------------------------------TG-----------CACTTGATAA----ACAAACAAATAACTTTGTTT------------------ATCCAGG------TAT-CTAAAAACAAACAACTTA-------------------TTAA---AATAG
droWil2 scf2_1100000004943:7801743-7801785 - AAGGGCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGCTT------------------------------------AAGATTTAAACAAATTG------------------TACAA---ATTCG
droVir3 scaffold_13047:18842529-18842620 + AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGCTATTCACAG--------------------------------TAAAC----------GATG-----------CATTTTATAA----ACAGAGTAACAGCCCTGTCT------------------GTAT------GGCTTACAGGTGCCAAGACATA-TA-------------------AACA---AATCC
droMoj3 scaffold_6540:14837554-14837554 - A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15116:874724-874724 - A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACAGATCGCAATG-AGTGCTAAGTCCGAAAAAGA---------------TTCCAAAA----ATAAATAAGGTACAAATGTTTTATTTTTAATTGTTGT------AATC-----CGTTTAGAGACCTAATGTT-CTTATCT-GTTA---------------------------------------ACA-------A----------------------------------TTGTAAT--------AGTATAAA-A-----------TTATTTCTAAGAATTTA------ATAAG-----------------------------------------------ATT-AAATATCATAATATA--------TTTGACT-----GTGATTTGGGTGTATCGATCAGTTTTAAAAGTGGATATCTCATCCTCTTAAATATTTTGCG---------------------------TGAGA-AGAACTAATAACTTGTAGCTCACTTTAAAATTTGCCATTCACAC--------------------------------AAAAC----------AATGATAAAC-----TATTCTGTAA----ACAGAAGTCCAACTTTGTTT------------------ACTT------GG-----TGAAACCTAAACAATTGA------------------GTTGA---AACTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................TTTAATTGTTGT------AATC-----CGTTTAGAGACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000001000000
.........................................................................................................................................................................................................................................................................TTATTTCTAAGAATTTA------ATAAG-----------------------------------------------ATT-AAATA............................................................................................................................................................................................................................................................................................................................................................3011.00100000001000000000
droSec2
AAT--------------------------------------------------------------------------------------------------------A-----CGTTAAGAGACCT---GTT-CTTATCT-GTTA---------------------------------------ACA-------A---------------------------------ATTGTAAGAATGTAATAGAATAAA-A-----------TTATTTCTAAG---TTA------ATAAG-----------------------------------------------ATG-ATATATCAAAATATA--------TCTGACT-----GTGATTT-GGTGTATCAATCAGTTTTAAAAGTGGATATTTCATTCTCTTAAATATTTTGCG---------------------------TCAGA-AGAACTAATTACTTGTAGCTCACTTTAAAATTTGCCATTCACAC--------------------------------AAAAC----------AATGATAAAC-----TATTCTGTAA----ACAGAAGTCCAACTTTGTTT------------------ACTT------GG-----TGAAACCTAAACAATTGA------------------GTTGA---AACTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAACAATTGA------------------GTTGA---AACTG2211.0011000
dm3
GCTGATCGCAATG-AGTGCTAAGTCCGAAATTGA---------------TTCCAAAA----ATAAATAAGGTACAAATGTTTTGTTGTTAAGTGTTGT------CATC-----CGTTTAGAGGTCTAATGTT-CTTATCT-GTTA---------------------------------------A---------A---------------------------------ATTATAATAATTTA---GTATAAA-A-----------GTATTTCTAAGAAGTTA------ATAAG-----------------------------------------------ATG-AAATATCATAAGATA--------TCTGACT-----GTGATTTGGGTGTATCGATCAGTTTTGAAAGTGGATCTTTCATCCTCTTAAATATTTAACGTTTATTACAACAAATCCACAGTTCAAATCGGA-AGAACTAATTCCTTGTAGTTCACTTTAAAATGTGCCATTCACAC--------------------------------AAAAC----------AATGATAAACTAGATTATTCTGTAA----ACAGAAGTCCAACTTTGTTT------------------ACTT------GG-----CGGAAACTAAACAATTGA------------------GTTGA---AACTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................TATCGATCAGTTTTGAAAGTGGA...........................................................................................................................................................................................................................................................................................23111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000001000000000000000200000000000001000000000000000000000000000000000000000000000000000000000002010000101000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACAGTTCAAATCGGA-AGAACTAA........................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTGTAGTTCACTTTAAAATGTGC.............................................................................................................................................................................................2613.0030000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................AGAGGTCTAATGTT-CTTATCT-GTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TATCGATCAGTTTTGAAAGTGGATC.........................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................TC-----CGTTTAGAGGTCTAATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TATCGATCAGTTTTGAAAGTGGATCT........................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAACTAGATTATTCTGT..............................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACAGTTCAAATCGGA-AGAACTAAT.......................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TC-----CGTTTAGAGGTCTAATGTT-CTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTACAACAAATCCACAGTTCAAATCG...................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................T------CATC-----CGTTTAGAGGTCTAATGTT-C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAACAATTGA------------------GTTGA---A....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................ATCGATCAGTTTTGAAAGTGGAA..........................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACAGTTCAAATCGGA-AG..............................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
............................................................................................TGTTGT------CATC-----CGTTTAGAGGTCTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAACTTTGTTT------------------ACTT------GG-----CGGAAAC..........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT------GG-----CGGAAACTAAACAATTGA------------------GTTGA---.....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACTAGATTATTCTGTAA----A.......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................A--------TCTGACT-----GTGATTTGGGTGT.................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGA-AGAACTAATTCCTTGTAGTT............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCTTGTAGTTCACTTT......................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................TAAGATA--------TCTGACT-----GTGATTTGGGT...................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGATAAACTAGATTATTCT................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAAACTAAACAATTGA------------------GTTGA---A....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------AATGATAAACTAGATTATTCTGT..............................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................AAGATA--------TCTGACT-----GTGATTTGGGT...................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTTGTAGTTCACTTTAAAATGT...............................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATTGA------------------GTTGA---AACTG1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGTTCAAATCGGA-AGAACTAATT......................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TCTGACT-----GTGATTTGGGTGTATCGAT...........................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TATCGATCAGTTTTGAAAGTGGATCTT.......................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................CAAATGTTTTGTTGTTAAGTGTTGT------CATC-----........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GCTGATCGCAATG-AGTGCTAAGTCCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................................TACAAATGTTTTGTTGTTAAGTGTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................TTTGGGTGTATCGATCAGTTTTGAAAGT..............................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAC--------------------------------AAAAC----------AATGATAAACT..........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TACAAATGTTTTGTTGTTAAGTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TTGGGTGTATCGATCAGTTTTGAAAG...............................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAACTTTGTTT------------------ACTT------GG-----CGGAA............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................GACT-----GTGATTTGGGTGTA................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TGTATCGATCAGTTTTGAAAGTGGA...........................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...GATCGCAATG-AGTGCTAAGTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT------GG-----CGGAAACTAAACAATTGA------------------GT...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCATCCTCTTAAATATTTAACGTT...............................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................TAAGATA--------TCTGACT-----GTGATTTGGGTG..................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--------------------------------AAAAC----------AATGATAAACTAGATT.....................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTCATCCTCTTAAATATTTAACGT................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGATTATTCTGTAA----ACAGA...................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................................ATA--------TCTGACT-----GTGATTTGGGT...................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................CATC-----CGTTTAGAGGTCTAATGTT-CTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................AATATCATAAGATA--------TCTGACT-----..............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACAC--------------------------------AAAAC----------AATGATAA.............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTTCAAATCGGA-AGAACTG.........................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATCCTCTTAAATATTTAACGTT...............................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GGAGTTCGCAACG-AAAGTGAAGTCCGAGAACGA---------------TTCCAAAA----ATAAATAAGGTACAAATAGTTTGTTGTCACGTGCTGC------CATT-----CGTTTAGAGGCTCAACGTT-C-TACCT-GTTA---------------------------------------ACA-------AATAAGAGCGCTTTTTAAGTGCAATTTCCGACACATTATATTAATATAGTAGTAGGAA-AGGCAAATGCTAGATTTTCTAAGATATCA------ATAAG-----------------------------------------------ATA-AAATATCCTAATATA--------T------------------AGGTGTACTTATCACTTTTGAAAGTGTATGTTGAATCGAGTAAAATATTTAGACTTTATTAATTCAA----ACAGTTCAAATCAGA-AGAACTAATAACTTGTAGCTCACTGTAA-ATGTGCCATTCACAC--------------------------------AAAAC----------AGTGATAAACAACATTATTTGGTAA----ACACAAGTCCAACTTTGTTT------------------ACTT------GA-----ACAAAACTATAAAATTTT------------------GTTGA---AACTASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
GGTGACCGCAGGG-AGTGTTAAGTCCGAGAACGA---------------TTCAAAAA----AGAAATGAGGTACAAATAGTTTGTTGTCAAGTGCTGC------CACT-----CGATTAGAGGCTCAACGTT--TTACCT-GTTA---------------------------------------GGAA------AATAGGAGCGCTTTTTAAATGCAATTTGCGACAATGTATAGTAATATAG-AGTAGGAA-AGGCTAATGCTAGAAGTTTTAAGATATTA------ATAAG-----------------------------------------------AAAAAAATATCGAAATATT--------------------------TGGCTGTACTTATTACTTTTGAAA-------------------------------------------------------------AA-AGAAGTTGTTACTTGTAGCCCACTTTAAAATGTGCCATTCACAC--------------------------------AAAAC----------AATGATAAACGACATTGTTTGTCAA----ACAAAAGTCCAACTTTGTTT------------------ACTT------GA-----ACAAAATTATAAAATTTA------------------ACTTA---AATTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATAAACGACATTGTTT.................................................................................................................1911.00100000010000
...................................................................................................................................T--TTACCT-GTTA---------------------------------------GGAA------AATAGGAGCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.............................................................................................................................................................................................................................................................AGGCTAATGCTAGAAGTTTTAAGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001
droEug1
GAAGAACATAATA-AATTTAGA---------------------------------------------AAAATTAAATAAATTTTCTGCCAAATGTTAAAATTTTAAATCAAATCGTTACGTAGTCAAAAAGGTTTGTTTTAAGCA------------------------AAACTATAACTTCAAGCAATTTTGC----------------------------------------------TA---AAT-AAAAC-----------TGATTAAAAAC---TTAAGAAAAA--------ATGTAATCTGGCGAAAAGCTATAAAAATAAGGAGATA---------------------------------------------------------------TCGATAAGGATGGCGCGGGTTCAGTTGG--AAACTATCATCAA---------------------------TCTGATGGGGATAATAATATGTTGCACAGTGTTG-TTTTGCCATTCAGAAGGAACGGGCCTAA----TTCTATCATGCACATAGGAGTACC--ATTCG--------------TTTTTGGTAA----ACAATTGACC-ACTCTGCTTAAA-TGAATAAATAA-ATC-A-TT----------------------------------------TAAAATTGGCC-GG-AA-GTSizeHit CountTotal NormTotal
No Reads
droBia1
AGAGTTGGAGTTC-AATAGCAGATCCAAAAACAA---------------GATTTCAG----TTAAATGAGGTACTCTACATTTGTTGACAAGTGTTAAATCTGTCAAT-----GACCACGAAAGCTAATGTA-TTTTTTTCAACA---------------------------------------G---------A---------------------------------ACAACCACGGTTTG---AAT-AAAAC-----------CTGTTTTTAAT---TCAAGTAAACTAAGATCAAATTGTTTAAGCTGAGAGATGTAACAAAAAAGGGGTT---------------------------------------------------------------TCTCTCTCGAAGATGCATGTT----------------------------------------------------------------------TTTTTCAGTATTAAATTTGCCATTCCCATGGAGACGTCTGTATGT-TTTAGCCATTCCCAAACCAC-G-GCGCCACAG-----------------TGGTAA----ACAGGAGAGC---TTGAG-G-----------------AATT-TAGTT-TA-----CCAAAACAATATAACTTG------------------TTTTT---AATCASizeHit CountTotal NormTotal
No Reads
droTak1
AGAGTTGGAGGCAAAACGTTAAATCCCAAAACAG---------------TTTTTAAT----TAAAATAAAT----------------------------------------------TTTTAAGTTAT---------------AAATAATTTTTTTAAAAAGCTGACAAAATGTCTAATTGTAAATA-------A----------------------------------A---------------------------------------TTTTA-----------------------------------------------AAACAACGGTATTTCGAAAAAATATATGTCCAAATATTAAAATAAATAAATCTTTTACAAAATTTGAAT-----------------------------------------------------------------------------------------------TTGTTGGGCAGTGTTC-ATTTGTCATTCACAATAGGTAACCTGCA----TCTTGTCATTCACGCAAAAGGGTA--ACTGC--------------TAACCAGTAA----ACAAACATT--ACTCTGGTAAAA-AGAATTAATGAAAAA-T-TATCT-TA-----CAAAGCC--------------------ATTAAAGAAGTCAG---AAAGASizeHit CountTotal NormTotal
No Reads
droEle1
ACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAACGCGTCGCCTGCAATATTTTAGCCATTTACTGAGAAGCGTT--ATTCT--------------TTTCTGGTAA----ACAGAAGTGC-TCTCTTCAAATA-ATAACAAATAT-TAA-A-TT-------------TAAGGAAAGAAAGAAA-----------------GGACC-TT-GG-AASizeHit CountTotal NormTotal
No Reads
droRho1
AAGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACATTTTTGTAGCCCGGTGTTAAATTTGTCATTCACAAGGCGTCGACTGCAATA-TTTCGTCATTTACCCAGAAGCG------GTT--------------TTTTTGGGTA----ACAAAAGACC-----------------------------------------------------AACAAATTAA------------------ATTGA---AAGTASizeHit CountTotal NormTotal
No Reads
droFic1
AGTGGTTTCAAAA-AT---TGAGCGCAAAAGGAGTTAGAACAACGGAAATTCGGAAATGAAACTACTAAGAGGC--------------------TTATAATAATTTTTCAAATAAATATTTATTCAAG-----------------AAAATGTTTTTTAATTGCCGAAAGCATCCATAATTTTAGTCACTTAAGC----------------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAATTACCTTTATACCAACTATTT----------------------------------------------------TTTTTCAGTGTTC-ATTCGCCATTCACAACT---CATCTGCAA---TTTTAACATTCACCCAGAAGGAAG--CCACT--------------TCTATGGTAA----ACAAAAGACGATCTCAGCGTAAATTCAATAAACAA-AAC-T-TATCTTGG-----TCGAAAAGGAGCAAGTAG--------------------GGG---ACCAGSizeHit CountTotal NormTotal
No Reads
droKik1
TTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTCGCCATTCTCATGGACACG----CAG---CCAGGCCATTCGCCACGAAGCG------GCT--G-----------ATGTTTGTAA----ACAGAAGAACAACTCTGTTTTT----------------GTTT------GG-----AAGTGAAAAACAAAA-TAAATGAAGCAATTTTCGTTGACG-GGAAA-CTSizeHit CountTotal NormTotal
No Reads
droAna3
TAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTGCCATTCACTT-------------------------------------------------TG-----------CACTTGACAAACAAAGAAA---ATAACTCATT-A-----------------AGTC-AGG------TAT-CTCAAAATAAACAACTTC--------------------ATA---AACTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TAGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGCCATTCACCT-------------------------------------------------TG-----------CACTTGATAA----ACAAACAAATAACTTTGTTT------------------ATCCAGG------TAT-CTAAAAACAAACAACTTA-------------------TTAA---AATAGSizeHit CountTotal NormTotal
No Reads
droWil2
AAGGGCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGCTT------------------------------------AAGATTTAAACAAATTG------------------TACAA---ATTCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGCTATTCACAG--------------------------------TAAAC----------GATG-----------CATTTTATAA----ACAGAGTAACAGCCCTGTCT------------------GTAT------GGCTTACAGGTGCCAAGACATA-TA-------------------AACA---AATCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 01:00 PM