ID:

dsi_11449

 Coordinate:

2r:15175915-15176175 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.3 -22.3 -22.1

Flybase annnotation

CDS [2r_15176164_15176289_-]; three_prime_UTR [2r_15175692_15176163_-]; exon [2r_15175692_15176289_-]

No Repeatable elements found

Sense Strand Reads

#########################################################################################################################################################################################################################################################################################################################################################################
ATCGGCCGCGCTACTTCCGGCGGGATGACGCCACGGGCTTCTGGGTGCTGGTTAGATATTAAAGCTTATTTTAGTGTTTAGTTGTTACGCAGTTCGAAAATGTCGCAGATGTGTTAATTGACTGGTGCATGTGTTAACTGTCGCTGTCCATCGCAAATGCTTCTGCTTGCCTTTTGTTTAAGTTTTGATCGTTGAGTTGATTGTATTCGGCTGTAATTGTCATTGATTTCCTGATTAATCTGTATCTGCTGTAATTATTGGCCGATTAGCAATAGCAATTGATGAATGCGACATAATCTCTCTTCAATTAGATACAAGATTGAGTTCCGACGCTGGAGACGGTTGCTTGGGACGAGCCTTA
********************************************************************************************************************************************************************************.....(((.((.((((...(((((((((..(((((((((((((.((((((((....))))))...........)))))))).))))))).........)))))))))....)))))).))).*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 M024
male body		 SRR618934
dsim w501 ovaries
 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 O001
Testis
 GSM343915
embryo
 M053
female body
 SRR553488
RT_0-2 hours eggs
........................................................................................................................................................................................................................................................................................................................TACAAGATTGAGTTCCGACGCTGGAGA...................... 27 0 1 6.00 6 0 1 4 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................TACAAGATTGAGTTCCGACGCTGGA........................ 25 0 1 4.00 4 3 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................TGGAGACGGTTGCTTGGGACGAGCC... 25 0 1 3.00 3 0 2 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................TTTAAGTTTTGATCGTTGAGTTGAT................................................................................................................................................................ 25 0 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0 0
................................................................................................................................................................................................................................................................................TAGCAATTGATGAATGCGACATAATC............................................................... 26 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................TTAGATACAAGATTGAGTTCCGACGC............................ 26 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 1
...................................................................................GTTACGCAGTTCGAAAATG................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................GATTGTATTCGGCTGTAAT................................................................................................................................................ 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................ACGGTTGCTTGGGACGAGCCTT. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
......................................................................................................................TTACTGGTGCATGTGTTAATTGTCGC......................................................................................................................................................................................................................... 26 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................TAGTTTTGATTGTTGAGTTGA................................................................................................................................................................. 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................GAGTTGATTGTATTCGGCT..................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TTTGTTTAAGTTTTGATCGTTGAGTTGAT................................................................................................................................................................ 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................TGGAGACGGTTGCTTGGGACGAGCCTT. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................AAATGTCGCAGATGTGTT...................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TGATCGTTGAGTTGATTGTATTCGGC...................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................ACGGTTGCTTGGGACGAGCCT.. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................TCCGACGCTGGAGACGGT.................. 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................TGCCTTTTGTTTAAGTTTTGATCGTTGA...................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CGTTGAGTTGATTGTATT.......................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................CTGTCGCTGTCCATCGCAAATGCT........................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................TATTGGCCGATTAGCAATAGCAAT.................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................TGTATTCGGCTGTAATTGT............................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................CGATTAGCAATAGCAATTGATGGATGC........................................................................ 27 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................TCTGCTTGCCTTTTGTTTAAG................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................TTTGTTTAAGTTTTGATCGTTGAGT.................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TTGATTGTATTCGGCTGTAATTGTCAT.......................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................ATACAAGATTGAGTTCCGACGCTGGA........................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TGAGATGATTACATTCGGCTGT................................................................................................................................................... 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................................CTGTATCTGCTGTAATTATTGGCC.................................................................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................TTGAGTTCCGACGCTGGAGACGGT.................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................TGGAGACGGTTGCTTGGGACGAGCCT.. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TTTCCTGATTAATCTGTATCTGCTGTA............................................................................................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................AGATTGAGTTCCGACGCC........................... 18 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................TTTTGTTTAAGTTTTGATCGTTGAGT.................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................CAATTGATGAATGCGACATAATCTCT............................................................ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................TCCGACGCTGGAGACGGTTG................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................TCCAAAATGTCGCGAATGTGTTAATT.................................................................................................................................................................................................................................................. 26 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TGATTTTCTGATTACTCGGTAT.................................................................................................................... 22 3 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................AAGACTGTTGCTTGGTACGA...... 20 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................TTAAGACTGTTGCTTGGGACG....... 21 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TTTTGATCGTTGCTTTGAT................................................................................................................................................................ 19 2 4 0.50 2 0 0 0 0 2 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................GACAGTTGCTTGGTACGAC..... 19 3 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................GTGCTAGTTAAATATAAAAGCT....................................................................................................................................................................................................................................................................................................... 22 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................TGATTTTCTGATTACTCGGTA..................................................................................................................... 21 3 7 0.14 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................TGTCGCTCTCCATCGTAA............................................................................................................................................................................................................. 18 2 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................ATTGACTGGTGCGAGTG.................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.GCGGCCTCGCTACTACCG...................................................................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................AACTGGCGCTGTTCATC................................................................................................................................................................................................................. 17 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

TAGCCGGCGCGATGAAGGCCGCCCTACTGCGGTGCCCGAAGACCCACGACCAATCTATAATTTCGAATAAAATCACAAATCAACAATGCGTCAAGCTTTTACAGCGTCTACACAATTAACTGACCACGTACACAATTGACAGCGACAGGTAGCGTTTACGAAGACGAACGGAAAACAAATTCAAAACTAGCAACTCAACTAACATAAGCCGACATTAACAGTAACTAAAGGACTAATTAGACATAGACGACATTAATAACCGGCTAATCGTTATCGTTAACTACTTACGCTGTATTAGAGAGAAGTTAATCTATGTTCTAACTCAAGGCTGCGACCTCTGCCAACGAACCCTGCTCGGAAT
***************************************************************.....(((.((.((((...(((((((((..(((((((((((((.((((((((....))))))...........)))))))).))))))).........)))))))))....)))))).))).******************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 M023
head
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
.................................................................................................................................................CAGGAACCGTTTACGAAG...................................................................................................................................................................................................... 18 2 15 0.53 8 0 4 4 0 0 0 0
.....................................................................................AGGCGTCAAGCTTATACAGG................................................................................................................................................................................................................................................................ 20 3 7 0.29 2 2 0 0 0 0 0 0
.......................................................................................GCGTCCAGGTTTTAGAGCGT.............................................................................................................................................................................................................................................................. 20 3 8 0.13 1 0 0 0 1 0 0 0
..........................................................................................................................ACCACGTACATAATCGAGA............................................................................................................................................................................................................................ 19 3 19 0.11 2 0 0 0 0 2 0 0
.......................................................................................................................................................GCGCTTACGAAGACGA.................................................................................................................................................................................................. 16 1 10 0.10 1 0 0 0 0 0 1 0
.......................................................................GTCACAAGTCAGCAATGCG............................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:15175865-15176225 - dsi_11449 ATCGGCCGCGCTACTTCCGGCGGGATGACGCCACGGGCTTCTGGGTGCTGGTTAGATATTAAAGC-------TTATT-TTA--------GT-GT--TTAG-TTGTTACGCAG--------TTC---GAAAATG-----------------TCGCAGATGTGTTAATTGAC-TGGTGCATGTGTTAA--------CTGTCG-------------------------------CTGTCCATCGCAA-AT------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCTTGCCTTTTGTT-TAAGTTTTGATCGTTGAGT-TGAT------------------------------TGTATTCGGCTGTAAT-----------------------------T---GTCATTGATTT------------CCTGA-------------TTAA-------TCTGT----ATCTGCTG-------------TAATTA------TTGGCCG-----ATTA-------GCAATAGCAATTG--A-----------TG---AATGC----------------------------GAC---------------------------------------------ATA----ATCTC--TCT--------------TCAA-------TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGGACGAGCCTTA
droSec2 scaffold_1:12036367-12036727 - ATCGGCCGCGCTACTTCCGGCGGGATGACGCCACGGGCTTTTGGGTGCTGGTTAGATATTAAAGC-------TTATT-TTA--------GT-GT--TTAG-TTGTTACGCAG--------TTC---GAAAATG-----------------TCGCAGATGTGTTAATTGAC-TGGTGCATGTGTTAA--------TTGTCG-------------------------------CTGTCCATCGCAA-AT------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCTTGCCTTTTGTT-TAAGTTTTGATCGTTGAGT-TGAT------------------------------TGTATTCGGCTGTAAT-----------------------------T---GTCATTGATTT------------CCTGA-------------TTAA-------TCTGT----ATCTGCTG-------------TAATTA------TTGGCCG-----ATTA-------GCAATAGCAATTG--A-----------TG---AATGC----------------------------GAC---------------------------------------------ATA----ATCTC--TCT--------------TCAA-------TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGGACGAGCCTTA
dm3 chr2R:14528649-14529013 - ATCGGCCGCGCTACTTCCGGCGGGATGACGCCACGGGCTTCTGGGTGCTGGTTAGATATTAAAGC-------TTATT-TTA--------GT-GT--TTAG-TTGTTACGCAG--------TTC---GAAAATG-----------------TCGCAGATGTGTTAATTGAC-TGGTGCATGTGTTAA--------TTGTCG-------------------------------CTGTCCACCGCAA-AT------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCTTGCCTTTTGTT-TAAGTTTTGATCGTTAAGT-TGAT------------------------------TGTATTCGGCTGTAAT-----------------------------T---GTCATTGATTT------------CCTGA-------------TTAA-------TTTGT----ATCTGCTG-------------TAATTA------TCGGCCG-----ATTA-------GCAATAGCAATTG--A-----------TG---AATGC----------------------------GAC----------------------------------------ATAC-ATA----ATCTC--TCT--------------TCAA-------TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGGACGAGCCTTA
droEre2 scaffold_4845:8717714-8718075 - der_1075 ATCGACCGCGCTACTTTCGGCGGGATGACGCCACGGGCTTCTGGGTGCTGGTTAGATATTAAAGC-------TTATT-TTA--------GT-GT--TTAG-TTGTTACGCAA--------TTC---GGAAATG-----------------TCGCAGATGTGTTAATTGAT-TGGTGCATGTGTTAA--------TTGTCG-------------------------------CTGTCCACCGCAA-AT------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCTTGCCTTTTGTT-TAAGTTTTGATCGTTGAGT-TGAT------------------------------TGTATTCGGCTGTA-T-----------------------------T---GTCATTGATTT------------CCTGA-------------TTAA-------TCTGTT--AATCTGCTG-------------TAATTA------TCGGCCG-----ATTA-------GCAATAGCAATTG--A-----------TG---AATGC----------------------------GAC---------------------------------------------ATA----ATCTC--TCT--------------TCAA-------TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGGACGAGCCTTA
droYak3 2R:14674464-14674835 + ATCGGCCGCGCTACTTTCGGCGGGATGACGCCACGGGCTTCTGGGTGCTGGTTAGATATTAAAGC-------TTATTTTTA--------GT-GT--TTAG-TTGTTACGCAG--------TTC---GAAAATG-----------------TCGCAGATGTGTTAATTGAT-TGGTGCATGTGTTAA--------TTGTCG-------------------------------CTGTCCATCGCAAAAT------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCTTGCCTTTTGTT-TAAGTTTTGATCGTTGAGT-TGAT------------------------------TGTATTCGGCTGTAAT-----------------------------T---GTCATTGATTT------------CCTGA-------------TTAACCAATCATCTGTT--AATCTGCTG-------------TAATTA------TCGGCCG-----ATTA-------GCAATTGCAATTG--A-----------TG---AATGC----------------------------GAC---------------------------------------------ATA----ATCTC--TCT--------------TCAA-------TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGGACGAGCCTTA
droEug1 scf7180000409663:838293-838666 + ATCGGCCGCGCTACTTCCGACGGGATGATGCAACGGGCTTCTGGGTGCTGGTTAGATATTAAAGC-------TTACT-TTA--------GTTAT--TTAG-TTGTTACGTAA--------TTC---GAAAATG-----------------TCGCAGATGTGTTAATTCGT-TGGTGCATGTGTTAA--------TTGTCG-------------------------------CTGTCCACCGCAA-AC------------------------------------------------------------------------------------------GCTTCT---------------------------G--------CTGCTTGCCT-TTGTT-TATCTTTTAATCGTTGTGT-TGATTGGATT------------------------TGTATTCGGCTGTAAA-----------------------------T---GTCATTGATAT------------TCCGA-------------TTAG-------TCTGTTGTAATCTGCTG-------------TATTTA------CCGCCCG-----ATTA-------GCAATTGCAATTG--A-----------TC---AATGC----------------------------GAC---------------------------------------------ATA----ATCTT--TCT--------------TTAA-------TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGGACGAGCCTTA
droBia1 scf7180000302291:1183192-1183545 - ATCGGCCTCGCTACTTCCGGCGGGATGATGCCACGGGCTTCTGGGTGCTGGTTAGATATTAAAGC-------TTACT-TTA--------GT-GT--TTAG-TTGTTACGCAA--------TTC---GAACCTG-----------------TCGCAGATGTGTTGATCGGC-TGGTGCATGTGTTAA--------TTGTCG-------------------------------CTGTCCACCGCAA-AT------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCCTGCCCTTTGTT-TCAGTTTTAATCGTTGAGT-TGAT------------------------------TGTATTCGGCTGTAAC-----------------------------T---GTCATTGCTGT------------TCTGA-------------TTAA-------TC----------TGATG-------------TAATTA------TAGCCCG-----ATTA-------ACAATTGTATTTG--A-----------AG---TATGC----------------------------GAC---------------------------------------------ATA----ATCTC--TCT--------------TCA--------CTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--AAC---GGTTGCTTGGGACGAGCCTTA
droTak1 scf7180000415910:183950-184309 - ATCGGCCTCGCTACTTCCGGCGGGATGACGCCACGGGCTTCTGGGTGCTGGTTAGATATTAAATC-------TTATT-TTA--------GT-GT--TTAG-TTGTTACGCAA--------TTC---GAAATTG-----------------TCGCAGATGTGTTAATTAGC-TGGTGCATGTGTTAA--------CCGTCG-------------------------------CTGTCCACCGCAA-AT------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCCTGCCT-TTGTT-TGAGTTTTAATCGTTGAGT-TAAT------------------------------TGTATTCGGCTGTAAT-----------------------------T---GTCATCGATAT------------TCTGA-------------TTAA-------TCCGT----ATCTGCTG-------------TAATTA------TCGCCCG-----ATTA-------GCAATTGTATTTG--A-----------TG---TGTGC----------------------------GAC---------------------------------------------ATA----ATCTC--TCT--------------TCAA-------TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGGACGAGCCTTA
droEle1 scf7180000491228:482956-483345 + ATCGGCCGCGCTACTTTCGACGGGACGATGGCACGGGCTGCTGGGTGCTGGTTAGATATTAAAGA-------TTACT-TTA--------GT-GT--TTAG-TTGTTACGCAA--------TTC---GAAACTG-----------------TCGCAGATTTGTTAAGTGTC-TGGTGCATGCGTTAA--------ATGTCG-------------------------------CTCTTCACCGCAA-AT------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCTTGCCT-TTGTT-TGAGTTTTAATCGTTGAGT-TGAGTTGAGTTGAGTTGAGTTGAGTTGAGTTGAGTGTATTCGGTTGTAAT-----------------------------T---GCCGTTGATAT------------TCCGA-------------TAAA-------CCTGT----ATCTGCTG-------------TAATTA------TCGCCTG-----ACTA-------GCAATTGCAATTG--A-----------TG---AATGC----------------------------GAC---------------------------------------------ATA----ATCTC--TTT--------------TTAA-------TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGATGCTTGGGACGAGCCTTA
droRho1 scf7180000766409:257981-258340 + ATCGGCCGCGCTACTTCCGGCGGGATGATAGCACGGGTTGCTGGGTGCTGGTTAGATATTAAAGC-------TTACT-TTA--------GT-GT--TTAG-TTGTTACGCAG--------TTC---GAAAATG-----------------TCGCAGATGTGTTAATTAGC-TGGTGCATGTGTTAA--------TTGTCG-------------------------------CTATCCACCGCAA-AT------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCTTGCCT-TTGTT-TGAGTTTTAATCGTTGAGT-TGAT------------------------------TGTATTCGTCTGTAAT-----------------------------T---GCCGTTGATAT------------TCTGA-------------TAAA-------TCCGT----ATATGCTG-------------TAATTA------TCGTCTG-----ATTT-------GCAATTGCAATTG--A-----------TG---AATGC----------------------------GAC---------------------------------------------ATA----ATCTC--TTT--------------TTAA-------TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGATGCTTGGGACGAGCCTTA
droFic1 scf7180000453811:447093-447455 + ATCGGCCGCGCTACTTCCGGCGGGATGATGCCACGGGCTGCTGGGTGCTGGTTAGATATTAAAGC-------TTACT-GTA--------GT-GC--TTAG-TTGTTACGCAA--------TTC---GAAACTG-----------------TCGCAGATGTGTTAATTGGC-TGGTGCATGTGTTAA--------TTGTCG-------------------------------CTGTCCACCGCAA-AT------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCTTGCCT-TTGTT-TGAGTTTTAATCGTTGAGT-TGAT------------------------------TGTATTCGGCTGTAAT-----------------------------TTTCGTCATTGATAT------------TCTAA---------------AA-------TGTGTA--TATCCACTG-------------TAATTA------TCGGCCG-----ATTA-------GCAACTGCAATTG--A-----------TG---AATGC----------------------------GAC---------------------------------------------ATA----ATCTC--TCT--------------TCAA-------TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGGACGAGCCTTA
droKik1 scf7180000302682:201578-201986 - ATCGGCCGCGCTATTTCCGGCGGGACGACGCCACGGGGTGCTGGGTGCTGGTTAGATATTAAAGC-------TTACTTTTA--------GT-GTTTTTAG-TTGTTACGCAAAACTACTGTTG---AAACAGA-----------------TCGCAGAT-----------------GCATGTGTTAA--------TTGTCG----------------------------------TCCGCCGCCAAAT---------------------------------------------------------------------------------------GCTGCTTCT---------------------------GT-------GCGCTTGCCT-TTGTT-TCAGTTTTAATCGTTGAGT-TAAT------------------------------GGCATTCGTCTGTAATTGTGTAATTTTGTAATTTGTAATTGTAATT---GTCGTTGATATTGATATATATATTCTGAT----AATTCGGATTAT-------TCTG--------TGCTG-------------TATTTA------TCGCCCG-----ATTAGCCTTTAG-CTTAGCAATT-----------------------GC----------------------------GAT---------------------------------------------CTA----ATCTC--TCTTTGAAATTTAAAT-TCAA-------TTAGATACAAGATTGACTTCCGACT-------------------------------------------------CTGGA--GAC---CG---------GTGAGCCTTA
droAna3 scaffold_13266:4842293-4842676 + ATCGGCCACGCTACTACCGGCGGGACGATGCCACGGGGTGCTGGGTGCCGGTTAGATATTAAAGC-------TT----TTAGTCCATAAGT-GC--TTAG-TTGTTACACAA--------TTC-AAGAAAGTG-----------------TCGCCGATGTTTTAATTGTT-TGGTGCATGTGTTAC--GAGTTATTATCG-------------------------------CT--CCTCCGCAA-CTCATTTTCA-------------------------------------------------------------------A------------CTGCTTCC-------------------------------------CGCTTGCCT-TTGTT-TCACTTTTAATCGTTGAGT-TAATTG----------------------------AGTATTGGTCTGTAAT-----------------------------T---GTCCTAGAAA--------------------------------AAA-------TGCGA------------------------------A------ACGATCC-----ATTA-------GCCATTGCAGTCA--A-----------TT---AATGC----------------------------GAA-------------------------------GC---GAACGTAA-ATA----ATCTCCCTCT--T----T---TC-CCAA-------CTAGAAGCAAGATTGAGTTCCGATGTGCA---------------------------------------------CTGGA--CGG---AGATGC-TGGGACGAGCCTTA
droBip1 scf7180000395751:647366-647720 + ATCGGCCGCGCTACTACCGGCGGGACGATGCCACGGGGTGCTGGGTGCCGGTTAGATATTAAAGC-------TT----TTAGTCCATAAGT-GC--TTAG-TTGTTACACAA--------TTC-AAGAAACTG-----------------TCGCCGATGTTTTAGTTGTT-TGGTGCATGTGCTGTTCGAGTTGTTCTCG-------------------------------CT--CCTCCGCAA-ATCATATCCA--------------------------------------------------------------------------------CAGCTTCT-------------------------------------CGCTTGCCT-----------------TCGTTGAGT-TAAT------------------------------TGTCTTGGCCTGTAAT-----------------------------T---GTCCTA---------------------------------------------------------------------------------------------CA-----ATTA-------GCTATAGCAGTCT--A-----------TTTATTATGC----------------------------GAA-------------------------------GC---GATCGTCA-ATA----ACCTCCCTCT--T----T---TCCCTAA-------CTAGAAGCAAGATTGAGCTCCGACGTGCA---------------------------------------------CTGGA--CGG---AGATGCTTGGGACGAGCCTTA
dp5 3:3539080-3539545 + ATCGACCGCGCTACTTTCGGCGCGACGATGCCACGGGGTGCTGGGCTCTGGTTAGATATTAAAGC-------TTAAT-TTA--------GT-GT--TTAG-TTGTTACGCAA--GTA--GTTGAAAG-AAACGTCATGGACAGTTGCCAATGGCAGATG--TCAAT--GT-TGGTGCATGTGTTAA--------TCGTCGTTACCATTTGCAGTGCCACCCCACACCCCTGCTACCCTTCGCAT-ATAATTTCCA-------------------------------------------------------------------C------------TT--------------------GATTG-TGGTTCTGCTCTACTCCCGCTTACTT-TTGTT-TGAAT-TTAATCGTTGAGT-TAAT------------------------------TGTATTTGGCTGTAAT-----------------------------T---ATAATCGATA--------------CTGA-------------T-AA-------TCCA--------TGCAGCACAGCACCCAATTATTTA------TAACTCAATTAGATTA-------GCAATTGC----G--A-----------TG---AGTGC---------------------------CGACATTGCTTGTTGTA-TGTATCTCA--------------------A-ATA----ATCTCTCTCT--------------TCAA-------TTAGATTCAAGAGTGAGTTCGGATG--------------------------------------------------TGAG--GAC---C---CTTTGGGACGCGCCTTA
droPer2 scaffold_2:3727248-3727713 + ATCGACCGCGCTACTTTCGGCGCGACGATGCCACGGGGTGCTGGGCTCTGGTTAGATATTAAAGC-------TTAAT-TTA--------GT-GT--TTAG-TTGTTACGCAA--GTA--GTTGAAAG-AAACGTCATGGACAGTTGCCAATGGCAGATG--TCAAT--GT-TGGTGCATGTGTTAA--------TCGTCGTTACCATTTGCAGTGCCACCCCACACCCCTGCTACCCTTCGCAT-ATAATTTCCA-------------------------------------------------------------------C------------TT--------------------GATTG-TGGTTCTGCTCTACTCCCGCTTACTT-TTGTT-TGAAT-TTAATCGTTGAGT-TAAT------------------------------TGTATTTGGCTGTAAT-----------------------------T---ATAATCGATA--------------CTGA-------------T-AA-------TCCA--------TGCAGCACAGCACCCAATTATTTA------TAACTCAATTAGATTA-------GCAATTGC----G--A-----------TG---AGTGC---------------------------CGACATTGCTTGTTGTA-TGTATCTCA--------------------A-ATA----ATCTCTCTCT--------------TCAA-------TTAGATTCAAGAGTGAGTTCGGATG--------------------------------------------------TGAG--GAC---C---CTTTGGGACGCGCCTTA
droWil2 scf2_1100000004514:159345-159850 - ATCGACCGCGCTACTTTAGACGTGACGAGGCCACGGGCTGCTGGGTTTTGGTTAGATATTAAAGT-------TTAAT-GTAGTCTACATTT-TT--TTAG-TTGTTA-GTAG--------TT----GAAACCT-----------------CCTAAGAGATGTCAATTGTTGTGGTGCATGTGTTTA--------TTGTCGTTTCCATTTC----G----------------CCGCCCATCGCCA-TC--------GCTCCCAGCACACTTCTATACCATTTACACATACATATATATATATATACTATATACTATACCTTTACTTTATCGAAATACTCTTTCTGTCTCTTCACTCATAATCGTTGCTTCT-----------GCTTTACATTTGTT--GAAT-TTAATTCGTTCGT-TCGTTCG--------TTAGTTC-GTTCAGTTAATTGTTTCC-T----------------------------------------------------------------------------------------------------------------------CAATTATTTATATGCATAACTCA-----ATTA-------GCAATTGCAATTGCAA-----------TT--------------------------------------------TTGT-----TGTATCACAAATATCAAACAAACA--AAAAAACA-ATCCTCTC--TCT--------------TCAA-------TTAGATTCAAGATTGAGTTCGG-CT-------------------------------------------------CTACA--GAACAACCA-TTTTGGAATGCGCCTTA
droVir3 scaffold_12875:14223295-14223594 + T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT--------------------------------------GCTTACAT-T--TT-TGCAATTTAATTGTTGAGT-TAAT------------------------------TGTTTTTGGCTGTAAT-----------------------------T---AAATTCGATG--------------C-GATTGCA-------ATTG---------CAAT----ACATGCTT-------------TATTTA------TAACTCGATTAG---G-------GCAATTGC----C--AACTGCTTTTGTTT---AATTCGCATCCA-----------ATCGAGTCTTG-TA-------TTGTATTGTATGTCAAATA-------TC---------ATA----TTCTT--TTT--------------TAAT-TACACATTAGGTTCGAGATTGAGTTCGGATATATATTCAAACGTATATATATATATGTATATATATATATATATATATGCCTAGA--GAA---CACCGTTTGGAATGCGCCTTA
droMoj3 scaffold_6496:9676234-9676332 + ATCGACCGCGTTACTTTAGGCGCGACGATGCCACGGGCTGCTGGACTTTGGTTAGATATTAAAGGGATATATATTTT-TTA--------GC-AA--TTAGTTTGTTACGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15245:14200759-14200995 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCTTACAATATATTTTGCAATTTAATTGTTGAGTTTAAT------------------------------TGTTTTTGGCTGTAAT-----------------------------T---GATA-------------------------------------------------------------------------------------------AACTCG-----ATTA-------GCAATAAT--TCA--ATGTGCTTTTGT------ATTTGTATTCAGCCTGCTGCGTATCGAGTCTTG-TATTGCATAT----------CTCAA-------ATATCAA--ATAT-AAATA--T--TC--TCT--------------TTAATTGC---CTAGATTCTAGATTGAGTTCGGATATATT---------------------------------------------ATATACAGAAC--A--ACTTTGGAATGCGCCTTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATCGGCCGCGCTACTTCCGGCGGGATGACGCCACGGGCTTCTGGGTGCTGGTTAGATATTAAAGC-------TTATT-TTA--------GT-GT--TTAG-TTGTTACGCAG--------TTC---GAAAATG-----------------TCGCAGATGTGTTAATTGAC-TGGTGCATGTGTTAA--------CTGTCG-------------------------------CTGTCCATCGCAA-AT------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCTTGCCTTTTGTT-TAAGTTTTGATCGTTGAGT-TGAT------------------------------TGTATTCGGCTGTAAT-----------------------------T---GTCATTGATTT------------CCTGA-------------TTAA-------TCTGT----ATCTGCTG-------------TAATTA------TTGGCCG-----ATTA-------GCAATAGCAATTG--A-----------TG---AATGC----------------------------GAC---------------------------------------------ATA----ATCTC--TCT--------------TCAA-------TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGGACGAGCCTTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GA.........................2716.00600000004100010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--...........................2514.00400000031000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGA--GAC---GGTTGCTTGGGACGAGCC...2513.00300000000001020000
.........................................................................................................................................................................................................................................................................................................................................................................................................TT-TAAGTTTTGATCGTTGAGT-TGAT------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000000200000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCAATTG--A-----------TG---AATGC----------------------------GAC---------------------------------------------ATA----ATC............................................................................................................................................2612.00200000000000020000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------C.................................2612.00200000010010000000
.......................................................................................................GTTACGCAG--------TTC---GAAAATG-----------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GAT------------------------------TGTATTCGGCTGTAAT-----------------------------................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---GGTTGCTTGGGACGAGCCTT.2211.00100001000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GAGT-TGAT------------------------------TGTATTCGGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TTTGTT-TAAGTTTTGATCGTTGAGT-TGAT------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGA--GAC---GGTTGCTTGGGACGAGCCTT.2711.00100000000000010000
................................................................................................................................AAATG-----------------TCGCAGATGTGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TGATCGTTGAGT-TGAT------------------------------TGTATTCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---GGTTGCTTGGGACGAGCCT..2111.00100000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACG-------------------------------------------------CTGGA--GAC---GGT..................1811.00100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................TGCCTTTTGTT-TAAGTTTTGATCGTTGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGAGT-TGAT------------------------------TGTATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
..................................................................................................................................................................................................CTGTCG-------------------------------CTGTCCATCGCAA-AT------------------------------------------------------------------------------------------GCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA------TTGGCCG-----ATTA-------GCAATAGCAAT............................................................................................................................................................................................................................................................2411.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATTCGGCTGTAAT-----------------------------T---GT..........................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................TCT--------------------------------------GCTTGCCTTTTGTT-TAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TTTGTT-TAAGTTTTGATCGTTGAGT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................T-TGAT------------------------------TGTATTCGGCTGTAAT-----------------------------T---GTCAT.......................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--...........................2611.00100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGT----ATCTGCTG-------------TAATTA------TTGGCC........................................................................................................................................................................................................................................................................................2411.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGT..................2411.00100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGA--GAC---GGTTGCTTGGGACGAGCCT..2611.00100000000000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT------------CCTGA-------------TTAA-------TCTGT----ATCTGCTG-------------TA........................................................................................................................................................................................................................................................................................................2711.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTGAGTTCCGACG-------------------------------------------------CC................................1811.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTT-TAAGTTTTGATCGTTGAGT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTG--A-----------TG---AATGC----------------------------GAC---------------------------------------------ATA----ATCTC--T.......................................................................................................................................2611.00100000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACG-------------------------------------------------CTGGA--GAC---GGTTG................2011.00100001000000000000
droSec2
ATCGGCCGCGCTACTTCCGGCGGGATGACGCCACGGGCTTTTGGGTGCTGGTTAGATATTAAAGC-------TTATT-TTA--------GT-GT--TTAG-TTGTTACGCAG--------TTC---GAAAATG-----------------TCGCAGATGTGTTAATTGAC-TGGTGCATGTGTTAA--------TTGTCG-------------------------------CTGTCCATCGCAA-AT------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCTTGCCTTTTGTT-TAAGTTTTGATCGTTGAGT-TGAT------------------------------TGTATTCGGCTGTAAT-----------------------------T---GTCATTGATTT------------CCTGA-------------TTAA-------TCTGT----ATCTGCTG-------------TAATTA------TTGGCCG-----ATTA-------GCAATAGCAATTG--A-----------TG---AATGC----------------------------GAC---------------------------------------------ATA----ATCTC--TCT--------------TCAA-------TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGGACGAGCCTTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................TGATCGTTGAGT-TGAT------------------------------TGTATTCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG--A-----------TG---AATGC----------------------------GAC---------------------------------------------ATA----ATCT...........................................................................................................................................2011.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------TAATTA------TTGGCCG-----ATTA-------GC.....................................................................................................................................................................................................................................................................2011.0010100
........................................................................................................TTACGCAG--------TTC---GAAAATG-----------------TCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCGGCTGTAAT-----------------------------T---GTCA........................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................AGTTTTGATCGTTGAGT-TGAT------------------------------T............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------TTGGCCG-----ATTA-------GCAATAGC...............................................................................................................................................................................................................................................................2011.0010010
dm3
ATCGGCCGCGCTACTTCCGGCGGGATGACGCCACGGGCTTCTGGGTGCTGGTTAGATATTAAAGC-------TTATT-TTA--------GT-GT--TTAG-TTGTTACGCAG--------TTC---GAAAATG-----------------TCGCAGATGTGTTAATTGAC-TGGTGCATGTGTTAA--------TTGTCG-------------------------------CTGTCCACCGCAA-AT------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCTTGCCTTTTGTT-TAAGTTTTGATCGTTAAGT-TGAT------------------------------TGTATTCGGCTGTAAT-----------------------------T---GTCATTGATTT------------CCTGA-------------TTAA-------TTTGT----ATCTGCTG-------------TAATTA------TCGGCCG-----ATTA-------GCAATAGCAATTG--A-----------TG---AATGC----------------------------GAC----------------------------------------ATAC-ATA----ATCTC--TCT--------------TCAA-------TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGGACGAGCCTTASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--...........................25129.002900000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000011400000000000000000000000000000000000000000000000000000000000000000000000400000000000001000000000001500000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGGA.........27116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000007000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CT................................2719.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100400000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGC...............2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100020000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGTT.................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000300000
......................................................................................................................................................TCGCAGATGTGTTAATTGAC-TGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................GCAG--------TTC---GAAAATG-----------------TCGCAGATGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGCTGTAAT-----------------------------T---GTCATTGAT...................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTA------TCGGCCG-----ATTA-------GCAATAGCAAT............................................................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---.....................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGG..........2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGT..................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACG-------------------------------------------------CTGGA--GAC---GGTTGC...............2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATACAAGATTGAGTTCCGACG-------------------------------------------------CT................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGA--GAC---GGTTGCTTGGGACGAGCCT..2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGA--GAC---GGTTGCTTGGGACGAGC....2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGC...............2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTC--TCT--------------TCAA-------TTAGATACAAGATT..............................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TTAATTGAC-TGGTGCATGTGTTAA--------T............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG-----ATTA-------GCAATAGCAATTG--A-----------TG---AATGC----------------------------......................................................................................................................................................................................................2713.0030000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCT..............2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000200000
............................CGCCACGGGCTTCTGGGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGG...........2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCGGCTGTAAT-----------------------------T---GTCATTGATT..................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTG............2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---.....................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA------TCGGCCG-----ATTA-------GCAATAGCAATT...........................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT------------CCTGA-------------TTAA-------TTTGT----AT.............................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CCACGGGCTTCTGGGTGCTGGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCAATTG--A-----------TG---AATGC----------------------------GGT----------------------------------------...........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATTCGGCTGTAAT-----------------------------T---GTCATTGATT..................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAGT-TGAT------------------------------TGTATTCGGCATC................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------CCTGA-------------TTAA-------TTTGT----ATCTGCTG-------------T.........................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATTCGGCTGTAAT-----------------------------T---GTCATTGAT...................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGG..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGC...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GA.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGAT------------------------------TGTATTCGGCTGTAAT-----------------------------................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................TTAG-TTGTTACGCAG--------TTC---GAAAATG-----------------T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
........................................................................................................................................................GCAGATGTGTTAATTGAC-TGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA------TCGGCCG-----ATTA-------GCAATAGCA..............................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA------TCGGCCG-----ATTA-------GCAATAGCAATTG--A-----------............................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................ATGTGTTAA--------TTGTCG-------------------------------CTGTCCACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TGTTACGCAG--------TTC---GAAAATG-----------------TCGCAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................ATTGAC-TGGTGCATGTGTTAA--------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................T-TAAGTTTTGATCGTTAAGT-TGAT------------------------------TGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTGAGTTCCGACG-------------------------------------------------CTGGA--GA.........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGG...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................C---GAAAATG-----------------TCGCAGATGTGTTAATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
..............TTCCGGCGGGATGACGCCACGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TGTT-TAAGTTTTGATCGTTAAGT-TGAT------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................T-TGAT------------------------------TGTATTCGGCTGTAAT-----------------------------................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTT-TAAGTTTTGATCGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT--------------TCAA-------TTAGATACAAGATTGAGT..........................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GAT------------------------------TGTATTCGGCTGTAAT-----------------------------T---............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------TTAGATACAAGATTGAGTTCC.......................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGA...........2511.0010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................AG--------TTC---GAAAATG-----------------TCGCAGATGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TAA--------TTGTCG-------------------------------CTGTCCACCGCAA-AT------------------------------------------------------------------------------------------GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TGTCG-------------------------------CTGTCCACCGCAA-AT------------------------------------------------------------------------------------------GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TGCCTTTTGTT-TAAGTTTTGATCGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCGTTAAGT-TGAT------------------------------TGTATTCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................TACGCAG--------TTC---GAAAATG-----------------TCGCAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................CG-------------------------------CTGTCCACCGCAA-AT------------------------------------------------------------------------------------------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................CAGATGTGTTAATTGAC-TGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGG..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TATT-TTA--------GT-GT--TTAG-TTGTTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA------TCGGCCG-----ATTA-------GCAATAGCAATTG--A-----------T...........................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATCGACCGCGCTACTTTCGGCGGGATGACGCCACGGGCTTCTGGGTGCTGGTTAGATATTAAAGC-------TTATT-TTA--------GT-GT--TTAG-TTGTTACGCAA--------TTC---GGAAATG-----------------TCGCAGATGTGTTAATTGAT-TGGTGCATGTGTTAA--------TTGTCG-------------------------------CTGTCCACCGCAA-AT------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCTTGCCTTTTGTT-TAAGTTTTGATCGTTGAGT-TGAT------------------------------TGTATTCGGCTGTA-T-----------------------------T---GTCATTGATTT------------CCTGA-------------TTAA-------TCTGTT--AATCTGCTG-------------TAATTA------TCGGCCG-----ATTA-------GCAATAGCAATTG--A-----------TG---AATGC----------------------------GAC---------------------------------------------ATA----ATCTC--TCT--------------TCAA-------TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGGACGAGCCTTASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGGAC........2819.0090000009
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTG............2511.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTG............2411.0011000000
...........................................................................................................................................................................TGGTGCATGTGTTAA--------TTGTCG-------------------------------C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
..................................................................................................................................ATG-----------------TCGCAGATGTGTTAATTGAT-TGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTA-T-----------------------------T---GTCATTGATTT------------CCTGA-------------...................................................................................................................................................................................................................................................................................................................................................2211.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------TAATTA------TCGGCCG-----ATTA-------GCAATAGCA..............................................................................................................................................................................................................................................................2711.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------GCAATAGCAATTG--A-----------TG---AATGC----------------------------GAC---------------------------------------------A.....................................................................................................................................................2611.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC----------------------------GAC---------------------------------------------ATA----ATCTC--TCT--------------TCAA-------TT..........................................................................................................2211.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATCGTTGAGT-TGAT------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.......................GATGACGCCACGGGCTTCTGGGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGATCGTTGAGT-TGAT------------------------------T............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................TTTGTT-TAAGTTTTGATCGTTGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGATCGTTGAGT-TGAT------------------------------TGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTT--AATCTGCTG-------------TAATTA------TCGGCC........................................................................................................................................................................................................................................................................................2711.0011000000
droYak3
ATCGGCCGCGCTACTTTCGGCGGGATGACGCCACGGGCTTCTGGGTGCTGGTTAGATATTAAAGC-------TTATTTTTA--------GT-GT--TTAG-TTGTTACGCAG--------TTC---GAAAATG-----------------TCGCAGATGTGTTAATTGAT-TGGTGCATGTGTTAA--------TTGTCG-------------------------------CTGTCCATCGCAAAAT------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCTTGCCTTTTGTT-TAAGTTTTGATCGTTGAGT-TGAT------------------------------TGTATTCGGCTGTAAT-----------------------------T---GTCATTGATTT------------CCTGA-------------TTAACCAATCATCTGTT--AATCTGCTG-------------TAATTA------TCGGCCG-----ATTA-------GCAATTGCAATTG--A-----------TG---AATGC----------------------------GAC---------------------------------------------ATA----ATCTC--TCT--------------TCAA-------TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGGACGAGCCTTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................TCGCAAAAT------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCTTGCCTTTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2617.00700000000007
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTT------------CCTGA-------------TTAACCAATC.........................................................................................................................................................................................................................................................................................................................................2011.00101000000000
....................................................................................................................................G-----------------TCGCAGATGTGTTAATTGAT-TG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000
.................................................................................................................................AATG-----------------TCGCAGATGTGTTAATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCT..............2211.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGTAAT-----------------------------T---GTCATTGATTT------------CCTG.................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.................................................................................................................................................................................ATGTGTTAA--------TTGTCG-------------------------------CTGTCCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
..............................................................................................................................GAAAATG-----------------TCGCAGATGTGTTAATTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGGA.........2711.00101000000000
.......................................TCTGGGTGCTGGTTAGATATTAAAGC-------TT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTG-------------TAATTA------TCGGCCG-----ATTA-------GC.....................................................................................................................................................................................................................................................................2211.00100000010000
droEug1
ATCGGCCGCGCTACTTCCGACGGGATGATGCAACGGGCTTCTGGGTGCTGGTTAGATATTAAAGC-------TTACT-TTA--------GTTAT--TTAG-TTGTTACGTAA--------TTC---GAAAATG-----------------TCGCAGATGTGTTAATTCGT-TGGTGCATGTGTTAA--------TTGTCG-------------------------------CTGTCCACCGCAA-AC------------------------------------------------------------------------------------------GCTTCT---------------------------G--------CTGCTTGCCT-TTGTT-TATCTTTTAATCGTTGTGT-TGATTGGATT------------------------TGTATTCGGCTGTAAA-----------------------------T---GTCATTGATAT------------TCCGA-------------TTAG-------TCTGTTGTAATCTGCTG-------------TATTTA------CCGCCCG-----ATTA-------GCAATTGCAATTG--A-----------TC---AATGC----------------------------GAC---------------------------------------------ATA----ATCTT--TCT--------------TTAA-------TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGGACGAGCCTTASizeHit CountTotal NormTotal
No Reads
droBia1
ATCGGCCTCGCTACTTCCGGCGGGATGATGCCACGGGCTTCTGGGTGCTGGTTAGATATTAAAGC-------TTACT-TTA--------GT-GT--TTAG-TTGTTACGCAA--------TTC---GAACCTG-----------------TCGCAGATGTGTTGATCGGC-TGGTGCATGTGTTAA--------TTGTCG-------------------------------CTGTCCACCGCAA-AT------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCCTGCCCTTTGTT-TCAGTTTTAATCGTTGAGT-TGAT------------------------------TGTATTCGGCTGTAAC-----------------------------T---GTCATTGCTGT------------TCTGA-------------TTAA-------TC----------TGATG-------------TAATTA------TAGCCCG-----ATTA-------ACAATTGTATTTG--A-----------AG---TATGC----------------------------GAC---------------------------------------------ATA----ATCTC--TCT--------------TCA--------CTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--AAC---GGTTGCTTGGGACGAGCCTTASizeHit CountTotal NormTotal
No Reads
droTak1
ATCGGCCTCGCTACTTCCGGCGGGATGACGCCACGGGCTTCTGGGTGCTGGTTAGATATTAAATC-------TTATT-TTA--------GT-GT--TTAG-TTGTTACGCAA--------TTC---GAAATTG-----------------TCGCAGATGTGTTAATTAGC-TGGTGCATGTGTTAA--------CCGTCG-------------------------------CTGTCCACCGCAA-AT------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCCTGCCT-TTGTT-TGAGTTTTAATCGTTGAGT-TAAT------------------------------TGTATTCGGCTGTAAT-----------------------------T---GTCATCGATAT------------TCTGA-------------TTAA-------TCCGT----ATCTGCTG-------------TAATTA------TCGCCCG-----ATTA-------GCAATTGTATTTG--A-----------TG---TGTGC----------------------------GAC---------------------------------------------ATA----ATCTC--TCT--------------TCAA-------TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGGACGAGCCTTASizeHit CountTotal NormTotal
No Reads
droEle1
ATCGGCCGCGCTACTTTCGACGGGACGATGGCACGGGCTGCTGGGTGCTGGTTAGATATTAAAGA-------TTACT-TTA--------GT-GT--TTAG-TTGTTACGCAA--------TTC---GAAACTG-----------------TCGCAGATTTGTTAAGTGTC-TGGTGCATGCGTTAA--------ATGTCG-------------------------------CTCTTCACCGCAA-AT------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCTTGCCT-TTGTT-TGAGTTTTAATCGTTGAGT-TGAGTTGAGTTGAGTTGAGTTGAGTTGAGTTGAGTGTATTCGGTTGTAAT-----------------------------T---GCCGTTGATAT------------TCCGA-------------TAAA-------CCTGT----ATCTGCTG-------------TAATTA------TCGCCTG-----ACTA-------GCAATTGCAATTG--A-----------TG---AATGC----------------------------GAC---------------------------------------------ATA----ATCTC--TTT--------------TTAA-------TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGATGCTTGGGACGAGCCTTASizeHit CountTotal NormTotal
No Reads
droRho1
ATCGGCCGCGCTACTTCCGGCGGGATGATAGCACGGGTTGCTGGGTGCTGGTTAGATATTAAAGC-------TTACT-TTA--------GT-GT--TTAG-TTGTTACGCAG--------TTC---GAAAATG-----------------TCGCAGATGTGTTAATTAGC-TGGTGCATGTGTTAA--------TTGTCG-------------------------------CTATCCACCGCAA-AT------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCTTGCCT-TTGTT-TGAGTTTTAATCGTTGAGT-TGAT------------------------------TGTATTCGTCTGTAAT-----------------------------T---GCCGTTGATAT------------TCTGA-------------TAAA-------TCCGT----ATATGCTG-------------TAATTA------TCGTCTG-----ATTT-------GCAATTGCAATTG--A-----------TG---AATGC----------------------------GAC---------------------------------------------ATA----ATCTC--TTT--------------TTAA-------TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGATGCTTGGGACGAGCCTTASizeHit CountTotal NormTotal
No Reads
droFic1
ATCGGCCGCGCTACTTCCGGCGGGATGATGCCACGGGCTGCTGGGTGCTGGTTAGATATTAAAGC-------TTACT-GTA--------GT-GC--TTAG-TTGTTACGCAA--------TTC---GAAACTG-----------------TCGCAGATGTGTTAATTGGC-TGGTGCATGTGTTAA--------TTGTCG-------------------------------CTGTCCACCGCAA-AT------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCTTGCCT-TTGTT-TGAGTTTTAATCGTTGAGT-TGAT------------------------------TGTATTCGGCTGTAAT-----------------------------TTTCGTCATTGATAT------------TCTAA---------------AA-------TGTGTA--TATCCACTG-------------TAATTA------TCGGCCG-----ATTA-------GCAACTGCAATTG--A-----------TG---AATGC----------------------------GAC---------------------------------------------ATA----ATCTC--TCT--------------TCAA-------TTAGATACAAGATTGAGTTCCGACG-------------------------------------------------CTGGA--GAC---GGTTGCTTGGGACGAGCCTTASizeHit CountTotal NormTotal
No Reads
droKik1
ATCGGCCGCGCTATTTCCGGCGGGACGACGCCACGGGGTGCTGGGTGCTGGTTAGATATTAAAGC-------TTACTTTTA--------GT-GTTTTTAG-TTGTTACGCAAAACTACTGTTG---AAACAGA-----------------TCGCAGAT-----------------GCATGTGTTAA--------TTGTCG----------------------------------TCCGCCGCCAAAT---------------------------------------------------------------------------------------GCTGCTTCT---------------------------GT-------GCGCTTGCCT-TTGTT-TCAGTTTTAATCGTTGAGT-TAAT------------------------------GGCATTCGTCTGTAATTGTGTAATTTTGTAATTTGTAATTGTAATT---GTCGTTGATATTGATATATATATTCTGAT----AATTCGGATTAT-------TCTG--------TGCTG-------------TATTTA------TCGCCCG-----ATTAGCCTTTAG-CTTAGCAATT-----------------------GC----------------------------GAT---------------------------------------------CTA----ATCTC--TCTTTGAAATTTAAAT-TCAA-------TTAGATACAAGATTGACTTCCGACT-------------------------------------------------CTGGA--GAC---CG---------GTGAGCCTTASizeHit CountTotal NormTotal
No Reads
droAna3
ATCGGCCACGCTACTACCGGCGGGACGATGCCACGGGGTGCTGGGTGCCGGTTAGATATTAAAGC-------TT----TTAGTCCATAAGT-GC--TTAG-TTGTTACACAA--------TTC-AAGAAAGTG-----------------TCGCCGATGTTTTAATTGTT-TGGTGCATGTGTTAC--GAGTTATTATCG-------------------------------CT--CCTCCGCAA-CTCATTTTCA-------------------------------------------------------------------A------------CTGCTTCC-------------------------------------CGCTTGCCT-TTGTT-TCACTTTTAATCGTTGAGT-TAATTG----------------------------AGTATTGGTCTGTAAT-----------------------------T---GTCCTAGAAA--------------------------------AAA-------TGCGA------------------------------A------ACGATCC-----ATTA-------GCCATTGCAGTCA--A-----------TT---AATGC----------------------------GAA-------------------------------GC---GAACGTAA-ATA----ATCTCCCTCT--T----T---TC-CCAA-------CTAGAAGCAAGATTGAGTTCCGATGTGCA---------------------------------------------CTGGA--CGG---AGATGC-TGGGACGAGCCTTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................GTT-TGGTGCATGTGTTAC--G..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000002
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------CTAGAAGCAAGATTGAGTTCC.......................................................................................2312.002020000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCA---------------------------------------------CTGGA--CGG---AGATGC-TGG...........2211.001100000
.........GCTACTACCGGCGGGACGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATTGAGTTCCGATGTGCA---------------------------------------------..................................2111.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---------------------------------------------CTGGA--CGG---AGATGC-TG............1911.001100000
......................GGACGATGCCACGGGGTGCTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
droBip1
ATCGGCCGCGCTACTACCGGCGGGACGATGCCACGGGGTGCTGGGTGCCGGTTAGATATTAAAGC-------TT----TTAGTCCATAAGT-GC--TTAG-TTGTTACACAA--------TTC-AAGAAACTG-----------------TCGCCGATGTTTTAGTTGTT-TGGTGCATGTGCTGTTCGAGTTGTTCTCG-------------------------------CT--CCTCCGCAA-ATCATATCCA--------------------------------------------------------------------------------CAGCTTCT-------------------------------------CGCTTGCCT-----------------TCGTTGAGT-TAAT------------------------------TGTCTTGGCCTGTAAT-----------------------------T---GTCCTA---------------------------------------------------------------------------------------------CA-----ATTA-------GCTATAGCAGTCT--A-----------TTTATTATGC----------------------------GAA-------------------------------GC---GATCGTCA-ATA----ACCTCCCTCT--T----T---TCCCTAA-------CTAGAAGCAAGATTGAGCTCCGACGTGCA---------------------------------------------CTGGA--CGG---AGATGCTTGGGACGAGCCTTASizeHit CountTotal NormTotal
No Reads
dp5
ATCGACCGCGCTACTTTCGGCGCGACGATGCCACGGGGTGCTGGGCTCTGGTTAGATATTAAAGC-------TTAAT-TTA--------GT-GT--TTAG-TTGTTACGCAA--GTA--GTTGAAAG-AAACGTCATGGACAGTTGCCAATGGCAGATG--TCAAT--GT-TGGTGCATGTGTTAA--------TCGTCGTTACCATTTGCAGTGCCACCCCACACCCCTGCTACCCTTCGCAT-ATAATTTCCA-------------------------------------------------------------------C------------TT--------------------GATTG-TGGTTCTGCTCTACTCCCGCTTACTT-TTGTT-TGAAT-TTAATCGTTGAGT-TAAT------------------------------TGTATTTGGCTGTAAT-----------------------------T---ATAATCGATA--------------CTGA-------------T-AA-------TCCA--------TGCAGCACAGCACCCAATTATTTA------TAACTCAATTAGATTA-------GCAATTGC----G--A-----------TG---AGTGC---------------------------CGACATTGCTTGTTGTA-TGTATCTCA--------------------A-ATA----ATCTCTCTCT--------------TCAA-------TTAGATTCAAGAGTGAGTTCGGATG--------------------------------------------------TGAG--GAC---C---CTTTGGGACGCGCCTTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................AT--GT-TGGTGCATGTGTTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TAAT------------------------------TGTATTTGGCTGTAAT-----------------------------T---A...........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTTGTTGTA-TGTATCTCA--------------------A-A.....................................................................................................................................................2411.0010000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGATG--------------------------------------------------TGAG--GAC---C---CTTTGGGACGT......2611.0010000000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGATG--------------------------------------------------TGAG--GAC---C---CTTTGGG..........2111.0010000000010
.......................GACGATGCCACGGGGTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGATG--------------------------------------------------TGAG--GAC---C---CTTT.............2011.0010000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTCGGATG--------------------------------------------------TGAG--GAC---C---CT...............2211.0010100000000
................................................................................................................................................................................................................TGCAGTGCCACCCCACACCCCTGCTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
............................................................................................GT--TTAG-TTGTTACGCAA--GT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TGAGT-TAAT------------------------------TGTATTTGGCTGTAAT-----------------------------T---A...........................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC----G--A-----------TG---AGTGC---------------------------CGACATTGCTTG...........................................................................................................................................................................................2311.0010100000000
droPer2
ATCGACCGCGCTACTTTCGGCGCGACGATGCCACGGGGTGCTGGGCTCTGGTTAGATATTAAAGC-------TTAAT-TTA--------GT-GT--TTAG-TTGTTACGCAA--GTA--GTTGAAAG-AAACGTCATGGACAGTTGCCAATGGCAGATG--TCAAT--GT-TGGTGCATGTGTTAA--------TCGTCGTTACCATTTGCAGTGCCACCCCACACCCCTGCTACCCTTCGCAT-ATAATTTCCA-------------------------------------------------------------------C------------TT--------------------GATTG-TGGTTCTGCTCTACTCCCGCTTACTT-TTGTT-TGAAT-TTAATCGTTGAGT-TAAT------------------------------TGTATTTGGCTGTAAT-----------------------------T---ATAATCGATA--------------CTGA-------------T-AA-------TCCA--------TGCAGCACAGCACCCAATTATTTA------TAACTCAATTAGATTA-------GCAATTGC----G--A-----------TG---AGTGC---------------------------CGACATTGCTTGTTGTA-TGTATCTCA--------------------A-ATA----ATCTCTCTCT--------------TCAA-------TTAGATTCAAGAGTGAGTTCGGATG--------------------------------------------------TGAG--GAC---C---CTTTGGGACGCGCCTTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................AAT------------------------------TGTATTTGGCTGTAAT-----------------------------T---ATAATC......................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
.................................................................................................................................AACGTCATGGACAGTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCTGTAAT-----------------------------T---ATAATCGATA--------------CTGA-------------T-A................................................................................................................................................................................................................................................................................................................................................2811.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AAT------------------------------TGTATTTGGCTGTAAT-----------------------------T---ATAAT.......................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG--------------------------------------------------TGAG--GAC---C---CTTTGGGACGCGCCT..2511.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTCGGATG--------------------------------------------------TGAG--GAC---.....................1911.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGTTCGGATG--------------------------------------------------TGAG--G..........................1811.001010000
.......................................................................................................................................ATGGACAGTTGCCAATGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.......................GACGATGCCACGGGGTGCTGGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
droWil2
ATCGACCGCGCTACTTTAGACGTGACGAGGCCACGGGCTGCTGGGTTTTGGTTAGATATTAAAGT-------TTAAT-GTAGTCTACATTT-TT--TTAG-TTGTTA-GTAG--------TT----GAAACCT-----------------CCTAAGAGATGTCAATTGTTGTGGTGCATGTGTTTA--------TTGTCGTTTCCATTTC----G----------------CCGCCCATCGCCA-TC--------GCTCCCAGCACACTTCTATACCATTTACACATACATATATATATATATACTATATACTATACCTTTACTTTATCGAAATACTCTTTCTGTCTCTTCACTCATAATCGTTGCTTCT-----------GCTTTACATTTGTT--GAAT-TTAATTCGTTCGT-TCGTTCG--------TTAGTTC-GTTCAGTTAATTGTTTCC-T----------------------------------------------------------------------------------------------------------------------CAATTATTTATATGCATAACTCA-----ATTA-------GCAATTGCAATTGCAA-----------TT--------------------------------------------TTGT-----TGTATCACAAATATCAAACAAACA--AAAAAACA-ATCCTCTC--TCT--------------TCAA-------TTAGATTCAAGATTGAGTTCGG-CT-------------------------------------------------CTACA--GAACAACCA-TTTTGGAATGCGCCTTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACA--GAACAACCA-TTTTGGAATGCGCCT..28124.002460288
.............................................................................................................................................................................................................................................................................................................................................................TCACTCATAATCGTTGCTTCT-----------GCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.00513001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGG-CT-------------------------------------------------CTACA--GAACAACCA-TTTTGGA..........2612.00220000
.................................................................................................................................................................................................................................................................................................................................................................TCATAATCGTTGCTTCT-----------GCTTTACATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAACCA-TTTTGGAATGCGCCTT.2511.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAAGATTGAGTTCGG-CC-------------------------------------------------..................................2111.00110000
..........................................................................................................................................................................................................................................................................................................................................................TCTTCACTCATAATCGTTGCTTCT-----------GCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTCGG-CT-------------------------------------------------CTACA--GAACAACCA-T................2611.00100010
...................................................................................................................................................................................................................................................................................................................................................TTCTGTCTCTTCACTCATAATCGTTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGG-CT-------------------------------------------------CTACA--GAACAACCA-TTTTGGAA.........2911.00110000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TTCG--------TTAGTTC-GTTCAGTTAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
......................................................................................................................................................................................................................................................................................................................................................................ATCGTTGCTTCT-----------GCTTTACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGG-CT-------------------------------------------------CTACA--GAACAACCA-TTTTGGA..........2811.00110000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACCA-TTTTGGAATGCGCC...2111.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------TCAA-------TTAGATTCAAGATTGAGTTCGG-CT-------------------------------------------------..................................2911.00110000
.......................GACGAGGCCACGGGCTGCTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAA-------TTAGATTCAAGATTGAGTTCGG-C....................................................................................2711.00100001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTCGG-CT-------------------------------------------------CTACA--GAACAACCA-TTT..............2811.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTCGG-CT-------------------------------------------------CTACA--GAACAACCA-TT...............2711.00100001
droVir3
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT--------------------------------------GCTTACAT-T--TT-TGCAATTTAATTGTTGAGT-TAAT------------------------------TGTTTTTGGCTGTAAT-----------------------------T---AAATTCGATG--------------C-GATTGCA-------ATTG---------CAAT----ACATGCTT-------------TATTTA------TAACTCGATTAG---G-------GCAATTGC----C--AACTGCTTTTGTTT---AATTCGCATCCA-----------ATCGAGTCTTG-TA-------TTGTATTGTATGTCAAATA-------TC---------ATA----TTCTT--TTT--------------TAAT-TACACATTAGGTTCGAGATTGAGTTCGGATATATATTCAAACGTATATATATATATGTATATATATATATATATATATGCCTAGA--GAA---CACCGTTTGGAATGCGCCTTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAG---G-------GCAATTGC----C--AACTGCTTTTGTT...........................................................................................................................................................................................................................................2615.005002000000000000000010000002000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAG---G-------GCAATTGC----C--AACTGCTTTTGT............................................................................................................................................................................................................................................2612.002000000000000000000000010001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................T--------------------------------------GCTTACAT-T--TT-TGCAATTTAATTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002002000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA------TAACTCGATTAG---G-------GCAATTGC----C--AAC.....................................................................................................................................................................................................................................................2812.002000000000000000000000000011000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAGATTGAGTTCGGATATATATTC............................................................................2712.002000000000000000000000000000200000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGATG--------------C-GATTGCA-------ATTG---------CAAT----ACAT...........................................................................................................................................................................................................................................................................................................................2712.002002000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAT-TACACATTAGGTTCGAGATTGAG...........................................................................................2712.002000000000000000001000000010000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCATCCA-----------ATCGAGTCTTG-TA-------TTG........................................................................................................................................................................................2612.002000000000000000000000010000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATATATATGCCTAGA--GAA---CACCGT...............2712.002000000000000000000000001000010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TGCAATTTAATTGTTGAGT-TAAT------------------------------TGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002000000000000000000000000000020000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAG---G-------GCAATTGC----C--AACTGCTTTTG.............................................................................................................................................................................................................................................2412.002001000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAT-TACACATTAGGTTCGAGATTGAGT..........................................................................................2811.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................................................................................................TTACAT-T--TT-TGCAATTTAATTGTTGAGT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTT---AATTCGCATCCA-----------ATCGAGTCT.......................................................................................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGATTGAGTTCGGATATATATTC............................................................................2611.001000010000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTCGATTAG---G-------GCAATTGC----C--AACTG...................................................................................................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAG---G-------GCAATTGC----C--AACTGCTTTTGTT...........................................................................................................................................................................................................................................2711.001000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATGCCTAGA--GAA---CACCGT...............2111.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAT-----------------------------T---AAATTCGATG--------------C-GATTGCA-------AT..................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT-TACACATTAGGTTCGAGATTGAGT..........................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAG---G-------GCAATTGC----C--AACTGCTTTTGT............................................................................................................................................................................................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTG-TA-------TTGTATTGTATGTCAAATA-------.................................................................................................................................................................2611.001000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTT-------------TATTTA------TAACTCGATTAG---G-------GCA....................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATTAGGTTCGAGATTGAGTTC........................................................................................2411.001000000000000000000010000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-TA-------TTGTATTGTATGTCAAATA-------TC---------ATA----...............................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGATTAG---G-------GCAATTGC----C--AACTGCT.................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGTTGAGT-TAAT------------------------------TGTTTTTGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTCGGATATATATTCAAACGTATAT..................................................................2911.001000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TTTAATTGTTGAGT-TAAT------------------------------TGTTTTTGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTGAGT-TAAT------------------------------TGTTTTTGGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................T-TGCAATTTAATTGTTGAGT-TAAT------------------------------TGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATATATATGCCTAGA--GAA---CACCG................2611.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTAGA--GAA---CACCGTTTGGAATGC......2611.001000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATATTCAAACGTATATATA...............................................................2211.001000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTTTTGTTT---AATTCGCATCCA-----------ATCGAG..........................................................................................................................................................................................................2911.001000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGGTTCGAGATTGAGTTCGGAT....................................................................................2511.001000000000001000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCGATG--------------C-GATTGCA-------ATTG---------CAAT----A..............................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC----C--AACTGCTTTTGTTT---AATTCG.................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACATTAGGTTCGAGATTGAGT..........................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA------TAACTCGATTAG---G-------GCAATTGC----C--AACC....................................................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTAGA--GAA---CACCGTTTGGAATG.......2511.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCA-----------ATCGAGTCTTG-TA-------TTGTATTGTAT................................................................................................................................................................................2811.001000000000000000000000000000000001000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGATG--------------C-GATTGCA-------ATTG---------CAAT----A..............................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTA------TAACTCGATTAG---G-------GCAATTGC----...........................................................................................................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-TACACATTAGGTTCGAGATTGAGT..........................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA---CACCGTTTGGAATGCGCC...2111.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGATATATATTCAAACGT......................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TTACAT-T--TT-TGCAATTTAATTGTTGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGGTTCGAGATTGAGT..........................................................................................1911.001000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTCAAACGTATATATATATATA.........................................................2620.501000000000000000000000000000001000000000000000000000000000000000
droMoj3
ATCGACCGCGTTACTTTAGGCGCGACGATGCCACGGGCTGCTGGACTTTGGTTAGATATTAAAGGGATATATATTTT-TTA--------GC-AA--TTAGTTTGTTACGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............TTAGGCGCGACGATGCCACGGGCTGCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
..................................................................ATATATATTTT-TTA--------GC-AA--TTAGTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.........................CGATGCCACGGGCTGCTGGACTTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
droGri2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------------------------------------------------------------------GCTTCT--------------------------------------GCTTACAATATATTTTGCAATTTAATTGTTGAGTTTAAT------------------------------TGTTTTTGGCTGTAAT-----------------------------T---GATA-------------------------------------------------------------------------------------------AACTCG-----ATTA-------GCAATAAT--TCA--ATGTGCTTTTGT------ATTTGTATTCAGCCTGCTGCGTATCGAGTCTTG-TATTGCATAT----------CTCAA-------ATATCAA--ATAT-AAATA--T--TC--TCT--------------TTAATTGC---CTAGATTCTAGATTGAGTTCGGATATATT---------------------------------------------ATATACAGAAC--A--ACTTTGGAATGCGCCTTASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-----------------------------T---GATA-------------------------------------------------------------------------------------------AACTCG-----ATTA-------GC.....................................................................................................................................................................................................................................................................1911.00110
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGCTGCGTATCGAGTCTTG-TATT................................................................................................................................................................................................2611.00110

Generated: 05/19/2015 at 05:37 AM