ID:

dsi_11443

 Coordinate:

3r:22159581-22159884 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.0 -5.9 -5.5

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TCCGTGGCCACTGGAGGCAGTGCCAACAGCAAGTATCGCCGCTAGATTGGGTGAGTAGCCGTACCCGCCATAAGTCGTTTCTTTTGAATGTGGCCTATGCATAAGAGCTACCTCAAATACGTCTTGCCACCAATATACCCATATACGCATATACTACTCGCCATTGATGCACTACGTCTGAAGTACATGTTTATTTGTAATTACTAATGTCTAAAATTCTCTTTGATTTAGATGCTCTTTGGGCGGCTAAAGCTCAAGAATCAAGACACTCTTTAGTAAGCTCGTTCATAAGCTAGGCCACACTCGCTTAGAGTTACTAAGCAGGAAACTTAACGCATTGTCTCTCTATCATAGGACAACTTACTACGATTTTACTCTACACTTAAGCTATACCATTGATTACC
****************************************************************************************************************************************************************************************************************************************************.(((..((((...((((......(((....)))......))))...)))).)))********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 M053
female body
 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 M023
head
 SRR902009
testis
....................................CGCCGCTAGCTTGGTTGAA............................................................................................................................................................................................................................................................................................................................................................. 19 3 5 2.00 10 0 0 0 0 0 4 6 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................................TACTACGATTTTACTCTACACTTAAGC................ 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................................................ACTTACTACGATTTTACTCTA......................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................GGCTAAAGCTCAAGAATCAAG........................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................TGAGCAGGAAACTTAACGCATTGTC.............................................................. 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................CTCGTTCATAAGCTAGGC.......................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................................................................................................TCTTTAGTAAGCTCGTTCATAAGC............................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................CGGCTAAAGCTCAAGAATCAAGA.......................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................GACACTCTTTAGTAAGCTCGTTC..................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CTCTTTGATTTAGATGCTCTTTGGGCGGC............................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................TCAAATACGTCGTGCCAACATT.............................................................................................................................................................................................................................................................................. 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1
...............................................................................................................................................................................................................................................................................................................................................................TAGGACAACTTACTACGATTTTACTC........................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................................CTCTTTGGGCGGCTAAAGCTCA.................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................AATGTCTAAAATTCTCTTTGATT................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................................AACTTACTACGATTTTACTCTAC........................ 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AAATTCTCTTTGATTTAGAT........................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................................................................................................TCTTTAGTAAGCTCGTTCATAAGCTAGGC.......................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................AAGTATCGCCGCTACATTGG.................................................................................................................................................................................................................................................................................................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................TTAACGCATTGTCTCTCTATCATAGGA................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................CACTCTTTAGTAAGCTCGTTCATAAG................................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................ACTAGGTCTGAAGTCCATG....................................................................................................................................................................................................................... 19 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................TCTCTCTATCATAGGACAACTTACTACGAT.................................. 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................TAAGCTAGGCCACACTCGCTCAGAG........................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................GCCGCTAGCTTGGTTGAA............................................................................................................................................................................................................................................................................................................................................................. 18 3 20 0.65 13 0 0 0 0 0 3 8 2 0 0 0
..............................................................................................................................................................................CGTCTGATGTACATGT...................................................................................................................................................................................................................... 16 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................................................CTAAAGTTGAGCTATACCA......... 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................CTCAAAGATTAAGACACTC..................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

AGGCACCGGTGACCTCCGTCACGGTTGTCGTTCATAGCGGCGATCTAACCCACTCATCGGCATGGGCGGTATTCAGCAAAGAAAACTTACACCGGATACGTATTCTCGATGGAGTTTATGCAGAACGGTGGTTATATGGGTATATGCGTATATGATGAGCGGTAACTACGTGATGCAGACTTCATGTACAAATAAACATTAATGATTACAGATTTTAAGAGAAACTAAATCTACGAGAAACCCGCCGATTTCGAGTTCTTAGTTCTGTGAGAAATCATTCGAGCAAGTATTCGATCCGGTGTGAGCGAATCTCAATGATTCGTCCTTTGAATTGCGTAACAGAGAGATAGTATCCTGTTGAATGATGCTAAAATGAGATGTGAATTCGATATGGTAACTAATGG
**********************************************************************************************************.(((..((((...((((......(((....)))......))))...)))).)))**************************************************************************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
................................................................................................................................................................................................................................................................................................................GCGAATCTCAAAGGTTCGT................................................................................. 19 2 3 1.33 4 4 0 0 0
....................................................................................................................TATGCAGGACGGTGGTTTTAGG.......................................................................................................................................................................................................................................................................... 22 3 1 1.00 1 0 1 0 0
.........................................................................................................................AGAACGGTGGTTATAT........................................................................................................................................................................................................................................................................... 16 0 1 1.00 1 1 0 0 0
................................................................................................................................................................................................................................................................................................................GCGAATCTCAATGACT.................................................................................... 16 1 1 1.00 1 1 0 0 0
.......................................................................................................................................................................................................................................................................................................CCGATGAGTGCGAATCTCAA......................................................................................... 20 3 2 0.50 1 1 0 0 0
............................................................................................................................................................................................................................................................................................................GTGGGCGAATCTCAA......................................................................................... 15 1 5 0.40 2 2 0 0 0
...........................................................................................................................................................................................................................................................................................................TGGGAGCGAATCTCAA......................................................................................... 16 1 3 0.33 1 1 0 0 0
...............................................................................................................................................................................................................................................................................................................GGCGAATCTCAATGA...................................................................................... 15 1 3 0.33 1 1 0 0 0
.................................................................................................................GTTTATGCAGAACGGT................................................................................................................................................................................................................................................................................... 16 0 3 0.33 1 1 0 0 0
................................................................................................................................................................................................................................................................................................................GCGAATCTCAAAGGTTCG.................................................................................. 18 2 5 0.20 1 1 0 0 0
................................................................................................................................................................................................................................................................................................................GCGAATCTCAATGAGTTG.................................................................................. 18 2 5 0.20 1 1 0 0 0
............................................................................................................................................................................................................................................................................................................................................................................ATGCTTAAAGGAGATGTG...................... 18 2 6 0.17 1 0 0 1 0
.................................................................................................................................................................................................................................................................................................................CGAATCTCAAAGGTTCGT................................................................................. 18 2 6 0.17 1 1 0 0 0
..........................................................................................................................................................................................................................................................................................................TTGAGAGCGAATCTCAA......................................................................................... 17 2 13 0.15 2 2 0 0 0
.......................................................................................................................................................................ACGTGTTTCAGACTTCTTGT......................................................................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 1
..........................................................................................................................................................................................................................................................................................................GTCCGAGCGAATCTCAA......................................................................................... 17 2 8 0.13 1 1 0 0 0
............................................................................................................................................................................................................................................................................................................TTGAGCGAATCTCAA......................................................................................... 15 1 8 0.13 1 1 0 0 0
...........................................................................................................................................................................................................................................................................................................AGTGGGCGAATCTCAA......................................................................................... 16 2 20 0.10 2 2 0 0 0
..........................................................................................................................................................................................................................................................................................................GTGTTGGCGAATCTCAA......................................................................................... 17 2 12 0.08 1 1 0 0 0
.............................................................................................................................................................................................................................................................................................................TGAGCGAATCTCAAA........................................................................................ 15 1 12 0.08 1 1 0 0 0
............................................................................................................................................................................................................................................................................................................GGGAGCGAATCTCAA......................................................................................... 15 1 16 0.06 1 1 0 0 0
..............................................................................................................................................................................................................................................................GTTGTTAGTTCTGCGAGG.................................................................................................................................... 18 3 20 0.05 1 0 0 1 0
................................................................................................................................................................................................................................................................................................................GCGAATCTCAATGAAA.................................................................................... 16 2 20 0.05 1 1 0 0 0
................................................................................................................................................................................................................................................................................................................GCGAATCTCAATTATGGG.................................................................................. 18 3 20 0.05 1 1 0 0 0
.................................................................................................................................................................................................................................................................................................................CGAATCTCAAAGAGTCG.................................................................................. 17 2 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:22159531-22159934 - dsi_11443 TCCGTGGCCACTGGAGGCAGTGCCAACAGCAAGTATCGCCGCTAGATT----GGGTGAGTAG---------------------------------CCGT----ACCCG-CCATAA----GTCGTTTCTTTTGAATGTGGCCTATG---CATAAGA---GCT--ACCTCAAATACGTCTTGCCACC-AATAT------------------------------ACCCATATACGCATA-TACTACTCG-----------------------------------CCATTGA--------------TGCACTA--CGTCTG-----A--------AGTACATGTTT-------ATTTGTAATTACTAA---TGTC-----TAAAATTCTCTTTGATTTAGATGCTCT----------------TT--GGGC---GGCT-AAAGCTCAAGA------------AT------CAAGACACTCTTTAGTAAGCTCGTTCATAAGCTAGG--------CC--ACACTCGCTTAGAGTTACTAA----GCA----------------------------------GGAAACTTA-ACGCATTGTCTCTC----T-------------------------ATC---ATAGGACAACTTACTACGATT-TTACTCTACACTTAAGCTATA-------CCATTGATTACC-----------------
droSec2 scaffold_13:1472592-1472995 - TCCGTGGCCACTGGAGGCAGTGCCAACAGCAAGTATCGCCGCTAGATT----GGGTGAGTAG---------------------------------CCGT----ACCCG-CCATTA----GTCGTTTCTTTTGAATGTGGCCTATG---CATAAGA---GCT--ACCTCAAATACGTCTTGCCACC-AATAT------------------------------ACCCATATACGCATA-TACTACTCG-----------------------------------CCATTGA--------------TGCACTA--CGTCTG-----A--------AGTACATGTTT-------ATTTGTAATTACTAA---TGTC-----TAAAATTTTCTTTGATTTAGATGCTCT----------------TT--GGGC---GGCT-AAAGCTCAAGA------------AT------CAAGACACTCTTTAGTAAGCTCGTTCATAAGCTAGG--------CC--ACACTCGCTTAGAGTTACTAA----GCA----------------------------------GGAAACTTA-ACGCATTGTCTCTC----T-------------------------ATC---ATAGGACAACTAACTACGATT-TTACTCTACACTTAAGCTATA-------CCATTGATTACC-----------------
dm3 chr3R:22699228-22699631 - TCCGTGGCCACTGGAGGCAGTGCCAACAGCAAATATCGCCGCTAGATT----GGGTGAGTAG---------------------------------CCGT----ACCCG-CCATTA----GTCGTTTCTTTTGAATGTGGTCTATG---CATAAGA---GCT--ACCTCAAATACGTCTTGCCACG-AATAT------------------------------ATCCATATACGCATA-TATTACTCG-----------------------------------CCATTGA--------------TGCACTA--CGTCTG-----A--------AGTACTTGTTT-------ATGTGTAATTACTAA---TGTC-----TAAAATTCTCTTTGATTTAGATGCTCT----------------TT--GGGC---GGCT-AAAGCTCAAGA------------AT------CAAGACACTCTTTAGTAAGCTCGTTCATAAGCTAGG--------CC--ACACTCGCTTAGAGTTACTAA----GCA----------------------------------GGAAACTTA-ACGCATTGTCTCTC----T-------------------------ATC---ATAGGACAACTAACTACGATT-TTACTGTACACTTAAGCTATA-------CCATTGATTACC-----------------
droEre2 scaffold_4820:5341185-5341585 + TCCGTGGCCACCGGTGGCAGTGCCAATAGCAAGTATCGGCGCTAGATC----GGGTGAGTAGA-T-------CG-------CGACATAGTAA---CCGT----ACCCG-CTATTA----GTCGCTTGTTTTAAATGTGGCCTATG---CATAAGA---GTT--ACCCCAAATACGTCTTGCCACC-CATAT------------------------------AC-----------------CACCCG-----------------------------------CCATTGA--------------TGCACTA--CGTCTG-----A--------AGTACGTGTTA-------ATTTGTAATTACTAA---TGTG-----GAAAATTCTCTTTGATTTAGATGCTCT----------------TT--GGGC---GGCT-AAAGCTCAAGA------------AT------CAAGACACTCTTTAATAAGCTCGTTCATAAGCTAGG--------CC--ACACTCGCTTA--GTTACTAA----ACA----------------------------------GGAAACTTA-ACGCATTGTCTCTC----T-------------------------ATC---ATAGGACAACTAACTACGATT-TTACTCTACACTTAAGATATA-------CCATTGATAACT-----------------
droYak3 3R:23789234-23789641 + TCTGTGGCCACGGGAGGTAGTGCCAATAGCAAGTATCGCCGCTAGATC----GGGTGAGTAGA-T-------GGCG-----ACATATAGTAA---CCGT----ACCCG-CCATTT----GTTGTTTGTTTTAAATGTGGCCTATG---CATAAGA---GTT--ACCCCAAATACGTCTTGCCATC-CATAT------------------------------ACCAATT--------------TCCG-----------------------------------CCATTGA--------------TGCACTA--CGTCTG-----A--------AGTACGTGTTT-------ATTTATAATTACTAA---TGTG-----TAAAATTCTCTTTGATTTAGATGCTCT----------------TT--GGGC---GGCT-AAAGCTCAAGA------------AT------CAAGACACTCTTTAATAAGCTCGTTCATAAGCTAGG--------CC--ACACTCGCTTAGAGTTACTAA----ACA----------------------------------GGAAACTTA-ACGCATTGTCTCTC----T-------------------------ATC---ATAGGACAACTAACTACGATT-TTACTCTACACTTAAGCTATA-------CCATTGATAAAT-----------------
droEug1 scf7180000409770:151163-151553 - TCCGTGGCCACTGGAGGCAGTGCCAACAGCAAGTATCGCCGCTAAACG----GGGTGAGTATGGTT-GTGATGG-------TGCAATCGCAA--CCAGA----CACAGCCCATTA----GTCGTTC-TTTTAAATGTGGCATATG---CATAAGA---GTT--ACCCC-AATACGTCTTGCCACC-TATAT------------------------------AC-----------------TACCCG-----------------------------------CCACAGA--------------TGCACTA--CGTCTG-----A--------AGTCCGTGTTA-------ATTTATTATTACTAA---CGTG-----TAATATTTTCTTTGATTTAGATGCT----------------------------------------CAAGA------------AT------CAAGATACAGTTAAATAAGCTCGTTGATAAGCTAGG--------CC--ACACTCTCTTAGAGTTTCTAA-----GA----------------------------------GGAGTGTTA-ACGCATTGTCTCTC----T-------------------------TTC---ATAGGACACCTAACTATGGTT-TTACTCTACACTTAAGTTATA-------CCAATGATTACT-----------------
droBia1 scf7180000302113:2962168-2962606 - TCGGTGGCCACAGGAGGCAGTGCCAACAGCAAGTATCGCCGCTAGAAG----GGGTGAGTAGA-T-------GG-------TGCAATCGCAA--CCCGT----CCCCG-CCATTA----GTCGTTCGTTTT-AATGTGGCCTATG---CATAAGA---GCT--GCCCCAAATACGTCTTGCCACC-CATATATACTATCTACTATCTACTACCCACTACCTAC-----------------CACCCG-----------------------------------CCACAGA--------------TGCACTA--CGTCTGTACTGAAGTACTGAAGC------CC-------ATGTATGATTACTAA---TGTG-----CAACGTTTTCTTTGATTTAGATGCTCT----------------TT--GGGC---GGCT-AAAGCCCAAGA------------AT------CAAGATACTGTTAAATAGGCTCGTTGATAAGCTAGG--------CC--ACACTCGCTTAGAGTTACTAA-----CA----------------------------------GGAAACCTA-ACGCATTGTCTCTC----T-------------------------ATC---ATAGGACAACTAACTACGGTT-TTACTCTACTCTTAAGCTATA-------CCATTGATAACT-----------------
droTak1 scf7180000415215:148373-148747 + TCGGTGGCCACCGGCGGCAGTGCCAACAGCAAGTATCGCCGCTAGAAAG---GGGTGAGTAGA-TG-ATGATGA---------TGATCGCAA--ACCGT----CCCCG-CCATTA----GTCGTTCGTTTTAAATGTGGCCTATG---CATAAGA---GTTAAACCCCCAATACGTCTTGCCACCCCATACTT--------------------------------------------------------------------------------------------------------------------TACTTTT---------------------------TGATTAATGTATGATTACTAA---TGTG-----TAAAATTTTCTTTGATTTAGATGCTCT----------------TT--GGGCTAAAGCA-AAAGCTCAAGT------------AT------CAAGATACTGTT----AAGCTCGTTGATAAGCTA-------------------------GAGTTACTAA-----CA----------------------------------GGAAACTTA-ACGCATTGTCTCTC--TCT-------------------------ATCAAAATAGGACAACTAACTACGGTT-TTACTCTACACTTAAGCTATA-------CCATTGATAAAT-----------------
droEle1 scf7180000491280:738676-738884 - T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------ATATATTAATACTAA---TGTG-----TAACGTTCTCTTTGATTTAGATGCTCT----------------CT--GGGC---GGCT-TAAGCCCATAA------------AT------CAAGATACTGTTAAATAAGCTCGTTGATAAGCTAGG-------GCC--ACACTCGCTTAGAGTTACTAA-----CA----------------------------------GGAAACATA-ACGCATTGTCTCTC----T-------------------------ATC---ATAGGACAACTAACCACGGTT-TTATTCTACACTTAAGATATA-------CCA------AAT-----------------
droRho1 scf7180000780070:148453-148661 + T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-------ATATATTAATACTAA---TGTG-----TAACGTTCTCTTTAATTTAGATGCTCT----------------TT--GGGC---GGCT-TAAGCTCAAGA------------AT------CAAGATACTGTTAAATAGGCTCGTTGATAAGCTAGG-------GCC--ATACTCGCTTAGAGTTACTAA-----CA----------------------------------GGAAACTTA-ACGCATTGTCTCTC----T-------------------------ATC---ATAGGACAACTAACTACGGTT-TTACTCTACACTTAAGCTATA-------CCA------AAT-----------------
droFic1 scf7180000454055:2596204-2596589 - TCGGTGGCCACCGGTGGCAGTGCCAATAGCAAGTACCGCCGCTGAATA----TGGTGAGTAGA-T-------GG-------TGCGATCGTTA--CCCGT----CCCCG-CAATTA----GTCATTCGTTTTAAATGTGGCCTATG---CATAAGA---GAT--ACCCC-AATACGTCTTGCCACC-CA--------------------------------------------------------------------------------------------------GA--------------CGCAGTG--CGTCTG-----T--------AGTCCACCATA-------ATGTATTATTACTAA---TGTG-----TATAATTCTCTCTGATTTAGATGCTCT----------------TT--GGGC---GGCT-AAAGCTCAAGA------------AT------CAAGATACTGTTAAATAGGCTCGTTGATAAGCTAGG--------CC--ACACTCGCTTAGAGTTACTAA-----CA----------------------------------GGAAAAATA-ACGCATTGTCTCTC----T-------------------------ATC---ATAGGACAACTAACTACGGTT-TTACTCTACTCTTAAGCTATA-------CCATTGATAACT-----------------
droKik1 scf7180000297719:43126-43388 + TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCA-----------------------------------CAGATGA--------------GGCAGTA--CGTCTG-----A--------AG-ACTCGTTA-------ATTTAT--TTACTAA---TGTG-----TAATGTTCTCTTTGATTTAGATGCTCT----------------C-------------AAAAAGATCATG-------------AT------CAAGATACTGTTAAATAGGCTCTTTGATAAGCTAGG--------CC--AGACTCGCTTA--GTTACTAA-----CA----------------------------------GGACACTTG-ACGAATTGTCTCTC----TCTCTCTATCTATCTCCTATCTCTCTATC---ATAAGACAACTAACTACGGTTTTTACTGTACACTTAAGCTATG-------CCATTGATAAAT----------------C
droAna3 scaffold_13340:16632988-16633366 + TCGGTGTCCACCGGAGGCAGCGCCAATAGCAAGTACCGCCGGTAGATT----TGGTGAGTAGA-AG-CCGCTAG-------TCAGAGCACAA--CCCGT----CCCCG-CCATTA----GTCGTTCGTTTTTATTGTGGCATATT---TATAAGA---TAT--AC--AAAATACGTCTTGCCACA-CT------------------------------CCAAT----------------------------------------------------------CAATTGAAAAAC-------T-TGCACTA--CGTATG-----A--------AGTCGCT-TCT------ATTGTAT--TAACTAA---TGTG-----TAA-ATTTTCTCTGATTTAGATGCC---------------------------------------TCACAA------------GT------CAAGATACTGTTAAATAAGCTTGTTGATAAGATAGG--------CT--CCGCTCGCTTAGAGTTACTAA-----CA----------------------------------GGACCTTTA-TCGCATTGTCTCTC----T-------------------------ATC---ATAGG-CATGAAACTAGAGAT-TTA-------ATTAAGATATA-------CCATGGATATAA-----------------
droBip1 scf7180000396424:149847-150237 + TCCGTGCCCACCGGAGGCAGT------AGCAAGTACCGCCGGTAGATT----TGGTGAGTAAC-AG-CCGCTAG-------TCAGAGCTCAA--CCCGT----CCCCG-CCATTA----GTCGTTCGTTTT-AATGTGGCATATAAGATATAAGA-----TA-ATACCAAATACGTCTTGCCACT-CT------------------------------CCCAT----------------------------------------------------------GAATTGAAAGAA-------T-CGCACTA--CGTCTA-----A--------AGACCCCCTTATTG--TATTGTA--TTTACTAA---TATG-----TACAATTTTCTCTGATTTAGATGC---------------------------------------CTCACAA------------TT------CAAGATACTGTTAAATAAGCTTGTTGATAAGATAGG--------CT--CCACTCGCTTAGAGTTACTAT-----CA----------------------------------GGACATTT--TCGCATTGTCTCTC----TCTCTCTTTG---------------TATC---ATAGG-CATGAAACTAGAGAT-TTA-------ATTAAGATATA-------CCATGGATTTAA-----------------
dp5 2:4766913-4767339 + TCGGTGGCCGTTGGAGGCAGTGCCAATAGCAAGTATCGCCGCTAGATCGC--CGGTAAGTAGA-GCGCC-----------CTGCGGCCGCAT--CCCGTCCCTCCCCG-CCATTTAGCTGTC----GTTTA-ATTG-------------ATAAGAAA-ACT--CCCCCAGATACGTCTTGCCGCCCCATATGT-------------------------------------------------------------------------------------------------------------------ATATGTTTA----AAA------------------ATGTTTAACGTAT--GAACTAA---TGTG-----TACAATTCTTTTTGATTTAGATGCCTTTTTGTGCGCA----CTTT--GTGC---AGCA-AAAGA--AAGA------------TT------CAAGGTACTCTTAA----------------GATAGCAACACAC-ACACACACTCGCTTAGAGTTAACAAAAAA---AAAACCAGAAAGCACACATAAACACTGAAAAACAGGACACTTA-ACGCATTGTCTCTCTATCT-------------------------ATC---ATAGGACGACTTACTGCGATTTTTACTCTACACTTAAGCTATA-------CCATTGATAATT-----------------
droPer2 scaffold_19:464039-464469 + TCGGTGGCCGTTGGAGGCAGTGCCAATAGCAAGTATCGCCGCTAGATCGC--CGGTAAGTAGA-GCGCC-----------CTGCGGCCGCAT--CCCGTCCCTCCCCG-CCATTTAGCTGTC----GTTTA-ATTG-------------ATAAGAAAAGCC--CCCCCAGATACGTCTTGCCGCCCCATATGT-------------------------------------------------------------------------------------------------------------------ATATGTTTA----AAA------------------ATGTTTAACGTAT--GAACTAA---TGTG-----TACAATTCTTTTTGATTTAGATGCCTTTTTGTGCGCA----CTTT--GTGC---AGCA-AAAGA--AAGA------------TT------CAAGGTACTCTTAA----------------GATAGCAACACAC-ACACACACTCGCTTAGAGTTAACAAAAAAAAAAAAAACAGAAAGCACACATAAACACTGAAAAACAGGACACTTA-ACGCATTGTCTCTCTATCT-------------------------ATC---ATAGGACGACTTACTGCGATTTTTACTCTACACTTAAGCTATA-------CCATTGATAATT-----------------
droWil2 scf2_1100000004943:2614803-2614992 + A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAT--ATACTAA---TTTG-----TATACTTCTTTTTAATTTAGATGCCTT----------------T--------------------------------------------------------------AGACTCGT-AATAAGATAG---------------------------TAACTAA-AAAACAGAATA-------CAGAC-----------AAAGCAGGA-------------CATCTCTCTATCT-------------------------TAT---ATAGGACAACTAACTACGGTTTTTACTCTATACCTAAGCTATACAGTTTACCATTAATATTTAATTTACTTTCTAAGGC
droVir3 scaffold_13047:18318486-18318886 - TCGGTGGCCACCGGGGGTAGCGCGAACAGCAAATATCGTCGTTAGTCG----GGGTAAGTAAA-G-------CGAGAGACA------TGCAAC-TCTGTCCCTCA-CG--CATTGCGCTGTCAT-------TGTTGTGGTACGTT-----------------------------------------------------------------------------T------ATGGCTAGTACAATT----TAAAGCAAAGTTTAAGGTACCAAATACTGACTCCAATTGTGTCGC---TCTCT-ATAAGTA--TG---------------------------------------TCAAAGTACTAATCCTTTAATCCTTATAATTCTCTTTGATTTAGATGCCTTTTTGTGTGTG----CCTTAAGTGC-AGCACA-AAAGCTCAGAATTCAAGATACAAATACAGATACTGATACTGATAAATAGGCTCGTAG-TAAGCTAGG--------ACACACACTCGCTTAG--TAACTTA-AAAACAGGATA-------AATAT-----------AA------TATATTAACTGCGTTGTCTCTC----T-------------------------TTC----------------------------------------------------------------------------------
droMoj3 scaffold_6540:13420729-13421090 + CCGTAGGCGACGGCTGGGAGTGCGACCGCCAAATATGGTCGTAAGTTCG---GTGTGAGTAAG-GG-CC-----------ATGCCATTC-ATGATTCGGTCCA------CCATGCCGTGGTCAT-------GGTAATGTTAGGTT-----------------------------------------------------------------------------T------ATGCTAAGTATCCGGTGATAAAGGCAAAGTTTAGGTTACCAATTCCTGCTTCCAATTGTGCCCC---ATTCTGATAAG---------------------------------TT-------ATGTCAAATTATTAA---TTTT-----AATAATTCTCTTTAATATGGATACTTATTGGTGTGTC----CCTTAAGTGT-ACCCCA-AAAGTTCGGAATCCAGGATCCAAAT------CCAGATCCAATTAAATAGGCTTGTTG-TAAGTTAGG--------CCAGGACCTCGTTTGG--TAACTTA-A-ACCA----------------------------------GGATATCTA----------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15074:6389322-6389718 + TCGGTGGCAACGGGCGCCAGCGCCAACAGCAAATATCGTCGTTAATTG-TTGGGGTAAGTAAA-GG-AAG-----------CGAGAGAGTTT--TCCGCTTCG--------ATTT----GTCAT-------TGTTGTGGTACATT-----------------------------------------------------------------------------TCTATAAATGCATAGTACAATTCGAGCAAGGCAAAGTTTAAGGTACAAATTACAGACAGCTATTGTTTGGCTCCATTCT-CTAAGTA--TGTCTG-----C--------AA--------A-------ATGTCAAATTACTAATCATTTA-----TATAATTCTCTTTAATTTAGATGCCTTTGTGTGTGTGTGCCCATAAAGTGC-AGCACA-AAAGC--AAGT-------TACAGATACAGATACAGATACTGATAAATAGGCTTGTT-ATAAGCTAGG--------ACACACACTCGCTTAG--TAACTTA-A-AACAGGATA-------CA------------------------TATTAGCTGCGTTGGCTCTC-------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCCGTGGCCACTGGAGGCAGTGCCAACAGCAAGTATCGCCGCTAGATT----GGGTGAGTAG---------------------------------CCGT----ACCCG-CCATAA----GTCGTTTCTTTTGAATGTGGCCTATG---CATAAGA---GCT--ACCTCAAATACGTCTTGCCACC-AATAT------------------------------ACCCATATACGCATA-TACTACTCG-----------------------------------CCATTGA--------------TGCACTA--CGTCTG-----A--------AGTACATGTTT-------ATTTGTAATTACTAA---TGTC-----TAAAATTCTCTTTGATTTAGATGCTCT----------------TT--GGGC---GGCT-AAAGCTCAAGA------------AT------CAAGACACTCTTTAGTAAGCTCGTTCATAAGCTAGG--------CC--ACACTCGCTTAGAGTTACTAA----GCA----------------------------------GGAAACTTA-ACGCATTGTCTCTC----T-------------------------ATC---ATAGGACAACTTACTACGATT-TTACTCTACACTTAAGCTATA-------CCATTGATTACC-----------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTACGATT-TTACTCTACACTTAAGC........................................2712.00200000020000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTACTACGATT-TTACTCTA.................................................2111.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCT-AAAGCTCAAGA------------AT------CAAG.....................................................................................................................................................................................................................................................2111.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGTTCATAAGCTAGG--------C............................................................................................................................................................................................................1811.00110000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTAGTAAGCTCGTTCATAAGC.........................................................................................................................................................................................................................2411.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................C---GGCT-AAAGCTCAAGA------------AT------CAAGA....................................................................................................................................................................................................................................................2311.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACTCTTTAGTAAGCTCGTTC...............................................................................................................................................................................................................................2311.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................CTCTTTGATTTAGATGCTCT----------------TT--GGGC---GGC..........................................................................................................................................................................................................................................................................................2911.00100000010000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGACAACTTACTACGATT-TTACTC...................................................2611.00100000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CTCT----------------TT--GGGC---GGCT-AAAGCTCA................................................................................................................................................................................................................................................................................2211.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................AA---TGTC-----TAAAATTCTCTTTGATT..................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTACTACGATT-TTACTCTAC................................................2311.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AAATTCTCTTTGATTTAGAT.............................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTAGTAAGCTCGTTCATAAGCTAGG--------C............................................................................................................................................................................................................2911.00100000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA-ACGCATTGTCTCTC----T-------------------------ATC---ATAGGA.........................................................................2711.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTCTTTAGTAAGCTCGTTCATAAG..........................................................................................................................................................................................................................2611.00100000001000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTC----T-------------------------ATC---ATAGGACAACTTACTACGAT...........................................................3011.00100000010000000000
droSec2
TCCGTGGCCACTGGAGGCAGTGCCAACAGCAAGTATCGCCGCTAGATT----GGGTGAGTAG---------------------------------CCGT----ACCCG-CCATTA----GTCGTTTCTTTTGAATGTGGCCTATG---CATAAGA---GCT--ACCTCAAATACGTCTTGCCACC-AATAT------------------------------ACCCATATACGCATA-TACTACTCG-----------------------------------CCATTGA--------------TGCACTA--CGTCTG-----A--------AGTACATGTTT-------ATTTGTAATTACTAA---TGTC-----TAAAATTTTCTTTGATTTAGATGCTCT----------------TT--GGGC---GGCT-AAAGCTCAAGA------------AT------CAAGACACTCTTTAGTAAGCTCGTTCATAAGCTAGG--------CC--ACACTCGCTTAGAGTTACTAA----GCA----------------------------------GGAAACTTA-ACGCATTGTCTCTC----T-------------------------ATC---ATAGGACAACTAACTACGATT-TTACTCTACACTTAAGCTATA-------CCATTGATTACC-----------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................AAGTATCGCCGCTAGATT----GG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACACTCTTTAGTAAGCTCGTTC...............................................................................................................................................................................................................................2411.0011000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTACTAA----GCA----------------------------------GGAAACT....................................................................................................................................2011.0010001
.....................................................................................................................................................................................................................................................................................................................................................................TTACTAA---TGTC-----TAAAATTTTC.........................................................................................................................................................................................................................................................................................................................................2111.0011000
........................................................................................................................................................................................................................................................................................................................................................................................................TTAGATGCTCT----------------TT--GGGC---GGCT-AAAGC...................................................................................................................................................................................................................................................................................2611.0011000
....................................................................................................................................AATGTGGCCTATG---CATAAGA---G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.............................................ATT----GGGTGAGTAG---------------------------------CCGT----ACCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
........................................................................................................................................................................................................................................................................................................................................................................................TAAAATTTTCTTTGATTTAGATGCTCT----------------........................................................................................................................................................................................................................................................................................................2711.0011000
dm3
TCCGTGGCCACTGGAGGCAGTGCCAACAGCAAATATCGCCGCTAGATT----GGGTGAGTAG---------------------------------CCGT----ACCCG-CCATTA----GTCGTTTCTTTTGAATGTGGTCTATG---CATAAGA---GCT--ACCTCAAATACGTCTTGCCACG-AATAT------------------------------ATCCATATACGCATA-TATTACTCG-----------------------------------CCATTGA--------------TGCACTA--CGTCTG-----A--------AGTACTTGTTT-------ATGTGTAATTACTAA---TGTC-----TAAAATTCTCTTTGATTTAGATGCTCT----------------TT--GGGC---GGCT-AAAGCTCAAGA------------AT------CAAGACACTCTTTAGTAAGCTCGTTCATAAGCTAGG--------CC--ACACTCGCTTAGAGTTACTAA----GCA----------------------------------GGAAACTTA-ACGCATTGTCTCTC----T-------------------------ATC---ATAGGACAACTAACTACGATT-TTACTGTACACTTAAGCTATA-------CCATTGATTACC-----------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................GCTAGATT----GGGTGAGTAG---------------------------------CCGT----ACCCG-..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ATATCGCCGCTAGATT----GG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.........................................CTAGATT----GGGTGAGTAG---------------------------------CCGT----....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTGATTTAGATGCTCT----------------TT--GGGC---GGC..........................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................TAAGA---GCT--ACCTCAAATACGTCTTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ATCGCCGCTAGATT----GGGTGAGTAG---------------------------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AAATTCTCTTTGATTTAGATG............................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................TA-TATTACTCG-----------------------------------CCATTGA--------------TGC..........................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................ATTGA--------------TGCACTA--CGTCTG-----A--------AGTACTT.........................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------CAAGACACTCTTTAGTAAGCTCGT.................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
...............................AATATCGCCGCTAGATT----GG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-ACGCATTGTCTCTC----T-------------------------ATC---ATAGGA.........................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGATTTAGATGCTCT----------------TT--GGGC---GGC..........................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGATT-TTACTGTACACTTAAGCT.......................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AATATCGCCGCTAGATT----GGGTGAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................CGT----ACCCG-CCATTA----GTCGTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................AAATATCGCCGCTAGATT----GGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ATT----GGGTGAGTAG---------------------------------CCGT----ACCCG-C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................TATCGCCGCTAGATT----GG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GCCGCTAGATT----GGGTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..................................................................................................................................................................................................................................................................................................................CTA--CGTCTG-----A--------AGTACTTGTTT-------..............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................A----GTCGTTTCTTTTGAATGTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCTCAAGA------------AT------CAAGAC...................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTCTCTC----T-------------------------ATC---ATAGGACA.......................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................GCTAGATT----GGGTGAGTAG---------------------------------CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTA-ACGCATTGTCTCTC----T-------------------------.....................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TGATTTAGATGCTCT----------------TT--GGGC---GGC..........................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGA------------AT------CAAGACACTCT..............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CTCT----------------TT--GGGC---GGCT-AAAGCTCAA...............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................AAATATCGCCGCTAGATT----GG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-AAAGCTCAAGA------------AT------CAAGACAC.................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCTCTC----T-------------------------ATC---ATAGG..........................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGTTACTAA----GCA----------------------------------GGAAAC.....................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-ACGCATTGTCTCTC----T-------------------------ATC---ATAGG..........................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................G-----------------------------------CCATTGA--------------TGCACTA--CGTCTG-----.........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................AA---TGTC-----TAAAATTCTCTTT......................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGATT-TTACTGTACACTTAAGC........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................ATGCTCT----------------TT--GGGC---GGCT-AAAGCTCAA...............................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TGGCCACTGGAGGCAGTGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ATCGCCGCTAGATT----GGGTGAGTAG---------------------------------CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCTCAAGA------------AT------CAAGACACTCTTTAG..........................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGCTCGTTCATAAGCTAGG--------.............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................................................................................CTCAAATACGTCTTGCCACG-A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CAACAGCAAATATCGCCGCTAGATT----.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTTAGAGTTACTAA----GCA----------------------------------GGAA.......................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TCT----------------TT--GGGC---GGCT-AAAGCTC.................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTC----T-------------------------ATC---ATAGGACAACTAACT................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................ATG---CATAAGA---GCT--ACCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGTACACTTAAGCTATA-------CCATTGAT.....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TGAGTAG---------------------------------CCGT----ACCCG-CCATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TGCACTA--CGTCTG-----A--------AGTACTTGTTT-------A.............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTA-ACGCATTGTCTCTC----T-------------------------ATC---ATAG...........................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TGATTTAGATGCTCT----------------TT--GGGC---GG...........................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------------------------ATC---ATAGGACAACTAACTACGAT...........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGTTACTAA----GCA----------------------------------GGA........................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................................................................................................................................................CG-AATAT------------------------------ATCCATATACGCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................AGCAAATATCGCCGCTAGATT----.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTAGTAAGCTCGTTCATA............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................TC-----TAAAATTCTCTTTGATTTA................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TCGCCGCTAGATT----GGGTGAGTAG---------------------------------CCGT----A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................ACTA--CGTCTG-----A--------AGTACTTGTTT-------..............................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TTGA--------------TGCACTA--CGTCTG-----A--------AG..............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTGATTTAGATGCTCT----------------TT--GGGC---GGC..........................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTGATTTAGATGCTCT----------------TT--GGG.................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................ACTA--CGTCTG-----A--------AGTACTTGTTT-------AT............................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................TCG-----------------------------------CCATTGA--------------TGCACTA--CGTCTG-----A--------A...............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAGCTATA-------CCATTGATTACC-----------------2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GATT----GGGTGAGTAG---------------------------------CCGT----ACCCG-CC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------AT------CAAGACACTCTTTAGTAAGCTCGT.................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTTA-ACGCATTGTCTCTC----...............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GCTCT----------------TT--GGGC---GGCT-AAAGCTCAA...............................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................GTGCCAACAGCAAATATCGCCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTCTTTAGTAAGCTCG..................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTAACTACGATT-TTACT....................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGACAACTAACTACGATT-TTACTG...................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAA----GCA----------------------------------GGAAACTTA-ACG..............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTA-ACGCATTGTCTCTC----T-------------------------ATT---...............................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................CGTCTG-----A--------AGTACTTGTTT-------ATGTGT........................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TAATTACTAA---TGTC-----TAAAATTCTCTT.......................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AGGCAGTGCCAACAGCAAATATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTAA----GCA----------------------------------GGAAACTTA-ACGCATTG.........................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AAATATCGCCGCTAGATT----G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GATT----GGGTGAGTAG---------------------------------CCGT----ACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TT----GGGTGAGTAG---------------------------------CCGT----ACCCG-..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAGTTACTAA----GCA----------------------------------GGAAACT....................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TGATTTAGATGCTCT----------------TT--GGGC---.............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ATATCGCCGCTAGATT----GGGTGAGTAG---------------------------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................G-----A--------AGTACTTGTTT-------ATGTGTAA......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................CATTGA--------------TGCACTA--CGTCTG-----A--------A...............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTC----T-------------------------ATC---ATAGGACAACTAACTACGA............................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGTAAGCTCGTTCATAAG..........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TCCGTGGCCACCGGTGGCAGTGCCAATAGCAAGTATCGGCGCTAGATC----GGGTGAGTAGA-T-------CG-------CGACATAGTAA---CCGT----ACCCG-CTATTA----GTCGCTTGTTTTAAATGTGGCCTATG---CATAAGA---GTT--ACCCCAAATACGTCTTGCCACC-CATAT------------------------------AC-----------------CACCCG-----------------------------------CCATTGA--------------TGCACTA--CGTCTG-----A--------AGTACGTGTTA-------ATTTGTAATTACTAA---TGTG-----GAAAATTCTCTTTGATTTAGATGCTCT----------------TT--GGGC---GGCT-AAAGCTCAAGA------------AT------CAAGACACTCTTTAATAAGCTCGTTCATAAGCTAGG--------CC--ACACTCGCTTA--GTTACTAA----ACA----------------------------------GGAAACTTA-ACGCATTGTCTCTC----T-------------------------ATC---ATAGGACAACTAACTACGATT-TTACTCTACACTTAAGATATA-------CCATTGATAACT-----------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............GGCAGTGCCAATAGCAAGTATCGGCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------CAAGACACTCTTTAATAAGCTCGTTC...............................................................................................................................................................................................................................2811.0010100000
droYak3
TCTGTGGCCACGGGAGGTAGTGCCAATAGCAAGTATCGCCGCTAGATC----GGGTGAGTAGA-T-------GGCG-----ACATATAGTAA---CCGT----ACCCG-CCATTT----GTTGTTTGTTTTAAATGTGGCCTATG---CATAAGA---GTT--ACCCCAAATACGTCTTGCCATC-CATAT------------------------------ACCAATT--------------TCCG-----------------------------------CCATTGA--------------TGCACTA--CGTCTG-----A--------AGTACGTGTTT-------ATTTATAATTACTAA---TGTG-----TAAAATTCTCTTTGATTTAGATGCTCT----------------TT--GGGC---GGCT-AAAGCTCAAGA------------AT------CAAGACACTCTTTAATAAGCTCGTTCATAAGCTAGG--------CC--ACACTCGCTTAGAGTTACTAA----ACA----------------------------------GGAAACTTA-ACGCATTGTCTCTC----T-------------------------ATC---ATAGGACAACTAACTACGATT-TTACTCTACACTTAAGCTATA-------CCATTGATAAAT-----------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTCTTTAATAAGCTCGTTC...............................................................................................................................................................................................................................2111.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTC----T-------------------------ATC---ATAGGACAACTAACTACG.............................................................2711.00110000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTC----T-------------------------ATC---ATAGGACAACTAACT................................................................2411.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC----T-------------------------ATC---ATAGGACAACTAACTACGA............................................................2511.00101000000000
..........................................................................................................................................................A---GTT--ACCCCAAATACGTCTTGCCATC-CAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00101000000000
....................................................................................................................................................................................................................................................................................................................................................TT-------ATTTATAATTACTAA---TGT.........................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTCATAAGCTAGG--------CC--ACACTCGCTT...............................................................................................................................................................................................2711.00101000000000
droEug1
TCCGTGGCCACTGGAGGCAGTGCCAACAGCAAGTATCGCCGCTAAACG----GGGTGAGTATGGTT-GTGATGG-------TGCAATCGCAA--CCAGA----CACAGCCCATTA----GTCGTTC-TTTTAAATGTGGCATATG---CATAAGA---GTT--ACCCC-AATACGTCTTGCCACC-TATAT------------------------------AC-----------------TACCCG-----------------------------------CCACAGA--------------TGCACTA--CGTCTG-----A--------AGTCCGTGTTA-------ATTTATTATTACTAA---CGTG-----TAATATTTTCTTTGATTTAGATGCT----------------------------------------CAAGA------------AT------CAAGATACAGTTAAATAAGCTCGTTGATAAGCTAGG--------CC--ACACTCTCTTAGAGTTTCTAA-----GA----------------------------------GGAGTGTTA-ACGCATTGTCTCTC----T-------------------------TTC---ATAGGACACCTAACTATGGTT-TTACTCTACACTTAAGTTATA-------CCAATGATTACT-----------------SizeHit CountTotal NormTotal
No Reads
droBia1
TCGGTGGCCACAGGAGGCAGTGCCAACAGCAAGTATCGCCGCTAGAAG----GGGTGAGTAGA-T-------GG-------TGCAATCGCAA--CCCGT----CCCCG-CCATTA----GTCGTTCGTTTT-AATGTGGCCTATG---CATAAGA---GCT--GCCCCAAATACGTCTTGCCACC-CATATATACTATCTACTATCTACTACCCACTACCTAC-----------------CACCCG-----------------------------------CCACAGA--------------TGCACTA--CGTCTGTACTGAAGTACTGAAGC------CC-------ATGTATGATTACTAA---TGTG-----CAACGTTTTCTTTGATTTAGATGCTCT----------------TT--GGGC---GGCT-AAAGCCCAAGA------------AT------CAAGATACTGTTAAATAGGCTCGTTGATAAGCTAGG--------CC--ACACTCGCTTAGAGTTACTAA-----CA----------------------------------GGAAACCTA-ACGCATTGTCTCTC----T-------------------------ATC---ATAGGACAACTAACTACGGTT-TTACTCTACTCTTAAGCTATA-------CCATTGATAACT-----------------SizeHit CountTotal NormTotal
No Reads
droTak1
TCGGTGGCCACCGGCGGCAGTGCCAACAGCAAGTATCGCCGCTAGAAAG---GGGTGAGTAGA-TG-ATGATGA---------TGATCGCAA--ACCGT----CCCCG-CCATTA----GTCGTTCGTTTTAAATGTGGCCTATG---CATAAGA---GTTAAACCCCCAATACGTCTTGCCACCCCATACTT--------------------------------------------------------------------------------------------------------------------TACTTTT---------------------------TGATTAATGTATGATTACTAA---TGTG-----TAAAATTTTCTTTGATTTAGATGCTCT----------------TT--GGGCTAAAGCA-AAAGCTCAAGT------------AT------CAAGATACTGTT----AAGCTCGTTGATAAGCTA-------------------------GAGTTACTAA-----CA----------------------------------GGAAACTTA-ACGCATTGTCTCTC--TCT-------------------------ATCAAAATAGGACAACTAACTACGGTT-TTACTCTACACTTAAGCTATA-------CCATTGATAAAT-----------------SizeHit CountTotal NormTotal
No Reads
droEle1
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------ATATATTAATACTAA---TGTG-----TAACGTTCTCTTTGATTTAGATGCTCT----------------CT--GGGC---GGCT-TAAGCCCATAA------------AT------CAAGATACTGTTAAATAAGCTCGTTGATAAGCTAGG-------GCC--ACACTCGCTTAGAGTTACTAA-----CA----------------------------------GGAAACATA-ACGCATTGTCTCTC----T-------------------------ATC---ATAGGACAACTAACCACGGTT-TTATTCTACACTTAAGATATA-------CCA------AAT-----------------SizeHit CountTotal NormTotal
No Reads
droRho1
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-------ATATATTAATACTAA---TGTG-----TAACGTTCTCTTTAATTTAGATGCTCT----------------TT--GGGC---GGCT-TAAGCTCAAGA------------AT------CAAGATACTGTTAAATAGGCTCGTTGATAAGCTAGG-------GCC--ATACTCGCTTAGAGTTACTAA-----CA----------------------------------GGAAACTTA-ACGCATTGTCTCTC----T-------------------------ATC---ATAGGACAACTAACTACGGTT-TTACTCTACACTTAAGCTATA-------CCA------AAT-----------------SizeHit CountTotal NormTotal
No Reads
droFic1
TCGGTGGCCACCGGTGGCAGTGCCAATAGCAAGTACCGCCGCTGAATA----TGGTGAGTAGA-T-------GG-------TGCGATCGTTA--CCCGT----CCCCG-CAATTA----GTCATTCGTTTTAAATGTGGCCTATG---CATAAGA---GAT--ACCCC-AATACGTCTTGCCACC-CA--------------------------------------------------------------------------------------------------GA--------------CGCAGTG--CGTCTG-----T--------AGTCCACCATA-------ATGTATTATTACTAA---TGTG-----TATAATTCTCTCTGATTTAGATGCTCT----------------TT--GGGC---GGCT-AAAGCTCAAGA------------AT------CAAGATACTGTTAAATAGGCTCGTTGATAAGCTAGG--------CC--ACACTCGCTTAGAGTTACTAA-----CA----------------------------------GGAAAAATA-ACGCATTGTCTCTC----T-------------------------ATC---ATAGGACAACTAACTACGGTT-TTACTCTACTCTTAAGCTATA-------CCATTGATAACT-----------------SizeHit CountTotal NormTotal
No Reads
droKik1
TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCA-----------------------------------CAGATGA--------------GGCAGTA--CGTCTG-----A--------AG-ACTCGTTA-------ATTTAT--TTACTAA---TGTG-----TAATGTTCTCTTTGATTTAGATGCTCT----------------C-------------AAAAAGATCATG-------------AT------CAAGATACTGTTAAATAGGCTCTTTGATAAGCTAGG--------CC--AGACTCGCTTA--GTTACTAA-----CA----------------------------------GGACACTTG-ACGAATTGTCTCTC----TCTCTCTATCTATCTCCTATCTCTCTATC---ATAAGACAACTAACTACGGTTTTTACTGTACACTTAAGCTATG-------CCATTGATAAAT----------------CSizeHit CountTotal NormTotal
No Reads
droAna3
TCGGTGTCCACCGGAGGCAGCGCCAATAGCAAGTACCGCCGGTAGATT----TGGTGAGTAGA-AG-CCGCTAG-------TCAGAGCACAA--CCCGT----CCCCG-CCATTA----GTCGTTCGTTTTTATTGTGGCATATT---TATAAGA---TAT--AC--AAAATACGTCTTGCCACA-CT------------------------------CCAAT----------------------------------------------------------CAATTGAAAAAC-------T-TGCACTA--CGTATG-----A--------AGTCGCT-TCT------ATTGTAT--TAACTAA---TGTG-----TAA-ATTTTCTCTGATTTAGATGCC---------------------------------------TCACAA------------GT------CAAGATACTGTTAAATAAGCTTGTTGATAAGATAGG--------CT--CCGCTCGCTTAGAGTTACTAA-----CA----------------------------------GGACCTTTA-TCGCATTGTCTCTC----T-------------------------ATC---ATAGG-CATGAAACTAGAGAT-TTA-------ATTAAGATATA-------CCATGGATATAA-----------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----T-------------------------ATC---ATAGG-CATGAAACTAGA.............................................................2211.001000010
.......................................CGGTAGATT----TGGTGAGTAGA-A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATAAGATAGG--------CT--CCGCT....................................................................................................................................................................................................2111.001010000
..........................TAGCAAGTACCGCCGGTAGATT----TG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
droBip1
TCCGTGCCCACCGGAGGCAGT------AGCAAGTACCGCCGGTAGATT----TGGTGAGTAAC-AG-CCGCTAG-------TCAGAGCTCAA--CCCGT----CCCCG-CCATTA----GTCGTTCGTTTT-AATGTGGCATATAAGATATAAGA-----TA-ATACCAAATACGTCTTGCCACT-CT------------------------------CCCAT----------------------------------------------------------GAATTGAAAGAA-------T-CGCACTA--CGTCTA-----A--------AGACCCCCTTATTG--TATTGTA--TTTACTAA---TATG-----TACAATTTTCTCTGATTTAGATGC---------------------------------------CTCACAA------------TT------CAAGATACTGTTAAATAAGCTTGTTGATAAGATAGG--------CT--CCACTCGCTTAGAGTTACTAT-----CA----------------------------------GGACATTT--TCGCATTGTCTCTC----TCTCTCTTTG---------------TATC---ATAGG-CATGAAACTAGAGAT-TTA-------ATTAAGATATA-------CCATGGATTTAA-----------------SizeHit CountTotal NormTotal
No Reads
dp5
TCGGTGGCCGTTGGAGGCAGTGCCAATAGCAAGTATCGCCGCTAGATCGC--CGGTAAGTAGA-GCGCC-----------CTGCGGCCGCAT--CCCGTCCCTCCCCG-CCATTTAGCTGTC----GTTTA-ATTG-------------ATAAGAAA-ACT--CCCCCAGATACGTCTTGCCGCCCCATATGT-------------------------------------------------------------------------------------------------------------------ATATGTTTA----AAA------------------ATGTTTAACGTAT--GAACTAA---TGTG-----TACAATTCTTTTTGATTTAGATGCCTTTTTGTGCGCA----CTTT--GTGC---AGCA-AAAGA--AAGA------------TT------CAAGGTACTCTTAA----------------GATAGCAACACAC-ACACACACTCGCTTAGAGTTAACAAAAAA---AAAACCAGAAAGCACACATAAACACTGAAAAACAGGACACTTA-ACGCATTGTCTCTCTATCT-------------------------ATC---ATAGGACGACTTACTGCGATTTTTACTCTACACTTAAGCTATA-------CCATTGATAATT-----------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTA-ACGCATTGTCTCTCT..................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTTGTGCGCA----CTTT--GTGC---AG...........................................................................................................................................................................................................................................................................................2311.0010000000100
...............................................................................................................................................................................................................................................................................................................................................................................................CTTTTTGATTTAGATGCCT.........................................................................................................................................................................................................................................................................................................................1911.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGCGCA----CTTT--GTGC---AGC..........................................................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-------------------------ATC---ATAGGACGACTTACTGC..............................................................2211.0010010000000
..................................ATCGCCGCTAGATCGC--CG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGACGACTTACTGCGATTTTTACT....................................................2611.0010100000000
....................................................CGGTAAGTAGA-GCGCC-----------CTGCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000001
droPer2
TCGGTGGCCGTTGGAGGCAGTGCCAATAGCAAGTATCGCCGCTAGATCGC--CGGTAAGTAGA-GCGCC-----------CTGCGGCCGCAT--CCCGTCCCTCCCCG-CCATTTAGCTGTC----GTTTA-ATTG-------------ATAAGAAAAGCC--CCCCCAGATACGTCTTGCCGCCCCATATGT-------------------------------------------------------------------------------------------------------------------ATATGTTTA----AAA------------------ATGTTTAACGTAT--GAACTAA---TGTG-----TACAATTCTTTTTGATTTAGATGCCTTTTTGTGCGCA----CTTT--GTGC---AGCA-AAAGA--AAGA------------TT------CAAGGTACTCTTAA----------------GATAGCAACACAC-ACACACACTCGCTTAGAGTTAACAAAAAAAAAAAAAACAGAAAGCACACATAAACACTGAAAAACAGGACACTTA-ACGCATTGTCTCTCTATCT-------------------------ATC---ATAGGACGACTTACTGCGATTTTTACTCTACACTTAAGCTATA-------CCATTGATAATT-----------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCTATCT-------------------------ATC---ATAGGACGA......................................................................2212.002200000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTACTGCGATTTTTACTCTAC................................................2211.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGA--AAGA------------TT------CAAGGTACT................................................................................................................................................................................................................................................2011.001100000
droWil2
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAT--ATACTAA---TTTG-----TATACTTCTTTTTAATTTAGATGCCTT----------------T--------------------------------------------------------------AGACTCGT-AATAAGATAG---------------------------TAACTAA-AAAACAGAATA-------CAGAC-----------AAAGCAGGA-------------CATCTCTCTATCT-------------------------TAT---ATAGGACAACTAACTACGGTTTTTACTCTATACCTAAGCTATACAGTTTACCATTAATATTTAATTTACTTTCTAAGGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
TCGGTGGCCACCGGGGGTAGCGCGAACAGCAAATATCGTCGTTAGTCG----GGGTAAGTAAA-G-------CGAGAGACA------TGCAAC-TCTGTCCCTCA-CG--CATTGCGCTGTCAT-------TGTTGTGGTACGTT-----------------------------------------------------------------------------T------ATGGCTAGTACAATT----TAAAGCAAAGTTTAAGGTACCAAATACTGACTCCAATTGTGTCGC---TCTCT-ATAAGTA--TG---------------------------------------TCAAAGTACTAATCCTTTAATCCTTATAATTCTCTTTGATTTAGATGCCTTTTTGTGTGTG----CCTTAAGTGC-AGCACA-AAAGCTCAGAATTCAAGATACAAATACAGATACTGATACTGATAAATAGGCTCGTAG-TAAGCTAGG--------ACACACACTCGCTTAG--TAACTTA-AAAACAGGATA-------AATAT-----------AA------TATATTAACTGCGTTGTCTCTC----T-------------------------TTC----------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................ATATCGTCGTTAGTCG----GG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002010000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTGATACTGATAAATAGGC.....................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................GTCAT-------TGTTGTGGTACGTT-----------------------------------------------------------------------------T------ATGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCTCAGAATTCAAGATA....................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGG--------ACACACACTCGCTTAG--T..........................................................................................................................................................................................2211.001000000000000010000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGATACAAATACAGATACTGATACT................................................................................................................................................................................................................................................2711.001100000000000000000000000000000000000000000000000000000000000000
droMoj3
CCGTAGGCGACGGCTGGGAGTGCGACCGCCAAATATGGTCGTAAGTTCG---GTGTGAGTAAG-GG-CC-----------ATGCCATTC-ATGATTCGGTCCA------CCATGCCGTGGTCAT-------GGTAATGTTAGGTT-----------------------------------------------------------------------------T------ATGCTAAGTATCCGGTGATAAAGGCAAAGTTTAGGTTACCAATTCCTGCTTCCAATTGTGCCCC---ATTCTGATAAG---------------------------------TT-------ATGTCAAATTATTAA---TTTT-----AATAATTCTCTTTAATATGGATACTTATTGGTGTGTC----CCTTAAGTGT-ACCCCA-AAAGTTCGGAATCCAGGATCCAAAT------CCAGATCCAATTAAATAGGCTTGTTG-TAAGTTAGG--------CCAGGACCTCGTTTGG--TAACTTA-A-ACCA----------------------------------GGATATCTA----------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TCGGTGGCAACGGGCGCCAGCGCCAACAGCAAATATCGTCGTTAATTG-TTGGGGTAAGTAAA-GG-AAG-----------CGAGAGAGTTT--TCCGCTTCG--------ATTT----GTCAT-------TGTTGTGGTACATT-----------------------------------------------------------------------------TCTATAAATGCATAGTACAATTCGAGCAAGGCAAAGTTTAAGGTACAAATTACAGACAGCTATTGTTTGGCTCCATTCT-CTAAGTA--TGTCTG-----C--------AA--------A-------ATGTCAAATTACTAATCATTTA-----TATAATTCTCTTTAATTTAGATGCCTTTGTGTGTGTGTGCCCATAAAGTGC-AGCACA-AAAGC--AAGT-------TACAGATACAGATACAGATACTGATAAATAGGCTTGTT-ATAAGCTAGG--------ACACACACTCGCTTAG--TAACTTA-A-AACAGGATA-------CA------------------------TATTAGCTGCGTTGGCTCTC-------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 11:46 AM