ID:

dsi_11435

 Coordinate:

3l:9144411-9144560 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.0 -19.9 -19.9

Flybase annnotation

Antisense to CDS [3l_9144545_9145180_-]; Antisense to three_prime_UTR [3l_9144396_9144544_-]; Antisense to exon [3l_9144396_9145420_-]

No Repeatable elements found

Sense Strand Reads

ATTTCCAAATCAAATACAAAAGTCACAACAATTTTAATTTTCCACACCAGGTGAACAAAAGATTTATTAAATTATTATGAGTATTCTAGTCTTTAGCTCATTACAAATGCAATGCAATAAATTAGGAACAATTAAGTTGGGGAATGATGATGGGTGATGATGGACGATCTTCTCGGTGGCTCGTTTACTTGTCCTTGCCGTTGGGTGCTCCGTTCTCCTTGCCGTCCTTGCCCTTCACCTCGCTATCGTT
**************************************************((((...(((((((.......(((...))).......)))))))...))))......(((...)))...................((.((((......(((((((.((...(((.....)))...)).)))))))......)))).))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M023
head
 O002
Head
 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
.............................................................................................................................................................................................TGTCCTTGCCGTTGGGTGCTC........................................ 21 0 1 2.00 2 0 2 0 0 0 0
..................................................................................................................................................ATGATGGGTGATGATGGACGA................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0
......................................................................................................................................................TGGGTGATGATGGACGATTT................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................ATGGGTGATGATGGACGATTT................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................TAGGAACAATTAAGTAGGGGA........................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................GTAGGGGAATGATGATGGGTG.............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................AGTAGGGGAATGATGATGG................................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................TAGGGGAATGATGATGGGTGT............................................................................................. 21 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................GATGGACGATCTTCTCGGTGGC...................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
.........................CAACAATTTTAATTTTCCA.............................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 1 0 0 0
.............................................................................................................................................................................................TGTCCTTGCCGTTGGGTGC.......................................... 19 0 1 1.00 1 0 0 1 0 0 0
...........................................................................................................................................................GATGATGGACGATCTTCTCGGTT........................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................TAGGGGAATGATGATGGGTGA............................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................GACGATCGTCTCAGTAGCTC.................................................................... 20 3 3 0.67 2 0 0 0 0 2 0
................................................................................................................................................TGATGATGGGTGATGATGGATTT................................................................................... 23 3 2 0.50 1 1 0 0 0 0 0
..........................................................................................................................................GAGGAATGATGATGGGGGA............................................................................................. 19 2 3 0.33 1 0 0 0 0 0 1
...............................................................................................................................................ATGATGATGGATGATGATG........................................................................................ 19 1 3 0.33 1 0 0 0 1 0 0
............................................................................................................................................AGAATGGTGATGCGTGATGA.......................................................................................... 20 3 4 0.25 1 0 1 0 0 0 0
................................................................................................................................................................................................................................TGATTGCCCTTCACCTCG........ 18 2 5 0.20 1 0 0 0 1 0 0
..............................................................................................................................................AATGATGATGAGTGATGAA......................................................................................... 19 2 8 0.13 1 0 0 0 1 0 0
......................................................ATAAAAGATTTATTAA.................................................................................................................................................................................... 16 1 20 0.10 2 0 0 0 0 0 2
.........................................................................................................................TTAGGAACAATTAAAT................................................................................................................. 16 1 20 0.05 1 0 0 0 1 0 0

Anti-sense strand reads

-----------------------------------#######################################################################################################################################################################################################################
TAAAGGTTTAGTTTATGTTTTCAGTGTTGTTAAAATTAAAAGGTGTGGTCCACTTGTTTTCTAAATAATTTAATAATACTCATAAGATCAGAAATCGAGTAATGTTTACGTTACGTTATTTAATCCTTGTTAATTCAACCCCTTACTACTACCCACTACTACCTGCTAGAAGAGCCACCGAGCAAATGAACAGGAACGGCAACCCACGAGGCAAGAGGAACGGCAGGAACGGGAAGTGGAGCGATAGCAA
**************************************************((((...(((((((.......(((...))).......)))))))...))))......(((...)))...................((.((((......(((((((.((...(((.....)))...)).)))))))......)))).))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR902008
ovaries
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 O002
Head
...............................................................................TCATAAGATCAGAAATCGAGTA..................................................................................................................................................... 22 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TAATAATACTCATAAGATCAGAAAT........................................................................................................................................................... 25 0 1 3.00 3 0 0 1 0 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................TACCCACTACTACCTGCTAGAAG.............................................................................. 23 0 1 3.00 3 0 0 0 3 0 0 0 0 0 0 0 0 0 0
.....................................................................TTAATAATACTCATAAGATCAGAAAT........................................................................................................................................................... 26 0 1 3.00 3 0 0 2 0 0 1 0 0 0 0 0 0 0 0
..............................................................................CTCATAAGATCAGAAATCGAGTA..................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CCCACGAGGCAAGAGGAACGGCA......................... 23 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CAAGAGGAAAGTCAGGAACGGGA................ 23 2 2 2.00 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CAAGAGGAACGGCAGGAACGGGAAG.............. 25 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CAGGAACGGGAAGTGGAGCGATA.... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................TAATACTCATAAGATCAGAAA............................................................................................................................................................ 21 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................CAACCCACGAGGCAAGAGGAACGGC.......................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................CTACTACCTGCTAGAAGAG............................................................................ 19 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................TTTAATAATACTCATAAGATCAGAAAT........................................................................................................................................................... 27 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 1 1 0 0
..................................................................................................................................................................CTGCTAGAAGAGCCACCGAGCAAATGA............................................................. 27 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGAGGAACGGCAGGAACGGGAAGT............. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................CTACTACCTGCTAGAAGA............................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................AGATCAGAAATCGAGTAATGTTTACG............................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................ATAATACTCATAAGATCAGAA............................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CCACGAGGCAAGAGGAACGGCAG........................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CAAGAGGAACGGCAGGAACGGGAAGT............. 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................TCAGAAATCGAGTAATGTTTA.............................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................CCACTACTACCTGCTAGAAGA............................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................CGAGCAAATGAACAGGAACGGC.................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TGGAACGGCAGGAACGGGAA............... 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................ACGTTACGTTATTTAATCC............................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................TGGTCCACTTGTTTTCTAAAT........................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................CTACTACCTGCTAGAAGAGCC.......................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CCCACGAGGCAAGAGGAACGGC.......................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TCATAAGATCAGAAATCGAGT...................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TACTACCCACTACTACCTGCTAGAAG.............................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................TACCCACTACTACCTGCTAGAAGAGC........................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TACCTGCTAGAAGAGCCACCGAGGAA................................................................. 26 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................CTACCTGCTAGAAGAGCCAC........................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................AGGCAAGAGGAACGGCAGGAACGGGA................ 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..............ATGTTTTCAGTGTTGTTA.......................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................ATGTTTACGTTACGTTATTTAATC............................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CCACGAGGCAAGAGGAACGG........................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................CTCATAAGATCAGAAATCGAG....................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..................................................................................................................................................................................................................ACAAGAGGAACGGCAGGAACGGGAAGT............. 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................CGAGCAAATGAACAGGAA...................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................CGAGCAAATGAACAGGAACGGCAAC............................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTACGTTACGTTATTTAATC............................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................AGATCAGAAATCGAGTAATG.................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................GTGTGGTCCACTTGTTTTCTAAATAATT.................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................CCTGCTAGAAGAGCCACCGAGGAAA................................................................ 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................CAGGAACGGCAACCCACGAGG....................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................CCTGCTAGAAGAGCCACCGAGGAAAT............................................................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................AATACTCATAAGATCAGAA............................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................TTTAATAATACTCATAAGATCAGAAA............................................................................................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TTACGTTACGTTATTTAATCCT........................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................................TAATACTCATAAGATCAGAAATC.......................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................TCATAAGATCAGAAATCGAG....................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................AAGGTGTGGTCCACTTGTTT............................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................ACTACCTGCTAGAAGAG............................................................................ 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................ACTCATAAGATCAGAAATCGAGCA..................................................................................................................................................... 24 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................CGAGCAAATGAACAGGAACGGCAACC.............................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TCATAAGATCAGAAA............................................................................................................................................................ 15 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GCAAGAGGAACGGCAGGAA..................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................CGAGCAAATGAACAGGAACAGC.................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................CAAATGAACAGGAACGGCAA................................................ 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................ACTACTACCTGCTAGAAGAG............................................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................CGAGCAAATGAACAGGAACGG................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................CCCACTACTACCTGCTAGAAGAGCCAC........................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CACTACTACCTGCTAGAAGAG............................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GGCCACCCACGAGGCAAGAGGAACGGC.......................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................CCTGCTAGAAGAGCCACCGAGCAAA................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................ACGAGGCAAGAGGAACG............................ 17 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................AAAGGTGTGGTCCACTT................................................................................................................................................................................................... 17 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................TAAGATCAGAAATCG......................................................................................................................................................... 15 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................TAAGATCAGAAATCGAGTAATGTTT............................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................GAGCCACCGAGCAAATGAACAGGA....................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................TAAAAGGTGTGGTCC....................................................................................................................................................................................................... 15 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................AAGATCAGAAATCGAGTAATG.................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................................................................................................AACGGTAACCCACGAGGCAAGAGGAA.............................. 26 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................CTACCCACTACTACCTGCTAGAAGA............................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................ATCGAGTAATGTTTA.............................................................................................................................................. 15 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................GGAAATGAACAGGAACG.................................................... 17 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................CGTTAAGTTAGTTAGTCCTTGT........................................................................................................................ 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................................................................CGGCAGGAACAGGAAGTTGAG......... 21 2 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................AAGTGTGGTCCACATGTTTAC............................................................................................................................................................................................. 21 3 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................ACCACCCACTACTGCC....................................................................................... 16 2 20 0.20 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0
..........................................................................................................................................................................................................TTTACGAGGCAAGAGGAACG............................ 20 3 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................ACTACCCACTACTGC........................................................................................ 15 1 14 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................................................AAAGGCAGGACTGGGAAGT............. 19 3 16 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................ACGGGAAGTGGTGGGCTAG... 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................AAATACGAGGCAAGAGGAAC............................. 20 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................GAGTAATGTTTAGGT........................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:9144361-9144610 + dsi_11435 ATTTC----------CA-------------------------AATCAA----------------------------------------------------------------------------------ATAC------AAAAGT---CACAACA------AT---TTTAATTTTCCACACCAGGTGAACAAAA---GATTTA--------------------------TTAAATTATTATGAGTATTCTAGTCT-TTAGCTCATTACAAA-TGC-----AA--------------TGCAAT---AAATTAGGAACAAT--------T--AAG--TTGGGGAATGA--------------TG-----------ATGGGTGATGAT-GG---------------------ACG---ATCTTCTCG--------------------------------------------GTGGCTCGTTTACT---TGTC---CT------------------TGCCGTTGGGTG------CTCCGTTCTCCTTGCC---------GTCCTTGCCC-TTCACCTCGCTATC---GTT
droSec2 scaffold_0:1618845-1619091 + ATTTC----------CA-------------------------AATCAA----------------------------------------------------------------------------------ATAC------AAAAGT---CACA---------AT---TTTAATTTTCCACACCAGGTGAACAAAA---GATTTA--------------------------TTAAATTATTATGAGTATTCTAGTCT-TTAGCTCATTACAAA-TGC-----AA--------------TGCAAT---AAATTAGGAACAAT--------T--AAG--TAGGGGAATGA--------------TG-----------ATGGGTGATGAT-GG---------------------ATG---ACTTTCTCG--------------------------------------------GTGGCTCCTTTACT---TGTC---CT------------------TGCCATTGGGTG------CTCCGTTCTCCTTGCC---------GTCCTTGCCC-TTCACCTCGCTATC---GTT
dm3 chr3L:9369457-9369718 + ATTTC----------CA-------AATATTTGCCTC------TTTCAA-AAACCA------------------------------------------------------------------ACTTTCAT-ATAC------AAAAGT---CACAACA------AT---TTTAATTTTCCACACCAGGTGAACAAAA--GGATTTA--------------------------TTAAATTAATATGAGTATTCTAGTCT-TTAGCTCATTACAAA-TAC-----AA--------------TGCAAT---AAATTAGGAACAAT--------T--AAG--TAGGGGAATGA--------------TG-----------ATGGATGATGTT-GG---------------------ATG---AT------G--------------------------------------------ATGGCTCCTTTACT---TGTC---CT------------------TGCCGTTGGGTG------CTCCGTTCTCCTTGCC------------------C-TTCACCTCGCTTTC---ATT
droEre2 scaffold_4784:9368587-9368875 + ATTATT--------TTAAAGGCAGAATGACAG-CTCTATCCAAAGCA--------------------------------------------------------------------------ACTATCATAATAC------AAAATT---CACAGAA------CT---TGTAAAATTTCACACCAGGTGTACAAAT---GATTTA--------------------------TTAAATTATTATGAGTATTCTAGTCTTTTAGTTCATTACAAG-TGC-----AA--------------TGCAAT---AAATTAGGAACAAT--------T--AAG--TGGGGGAATGA--------------TG-----------ATGGGTGATATT-A--GGAGTACAAT----AA--AGATG---ATCTTCTTG--------------------------------------------GTGGCACCTTTACT---TGTC---CT------------------TGCCATTGGTTG------CTCCGTTCTCTTTGCC------------------C-TTCACCTCGCTGGC---ATT
droYak3 3L:2547595-2547861 - ATTAA----------TA-------------------------AACTAT---------------------------------------------------------------------ACCAACTAGCATAATAC------AAAAAT---AACAAAG------TT---CGTAAATTTTCACACCAGGTGTACAAAT---GATTTA--------------------------TTAAATTATTATGAGTATTCAAGTCT-TTAGCTCATTACAAA-TGC-----AA--------------TGCAAT---AAATTAGGAACAAT--------T--AAG--TGGGGGAATGA--------------TG-----------ATGGGTGACATT-G--GGAGTAAAAT----ATG--GATG---AACTCCTCG--------------------------------------------GTGGCTCCTTTACT---TGTC---CT------------------TGCCGTTGGTGG------CTCCGTTCTCCTTGCC------------------C-TTCAACTCGCTGGC---ATT
droEug1 scf7180000409824:161966-162325 - AATTTCAACTTATGTTT-------------------------TT---G-GAAGA-----TGTTACTTTTTTTCGCCTCACAAATTTTTGCCATAAAAAATTCTTTTTTTTTTATTCTCCCAA---TCAC-ATA-------AAAAAA---CACAAAAA---GCAT---TTACATTTTCCACACCAGGTGAACAAAT---TGTTTA--------------------------ATAAGTTAT------TCTTCAAGTCT-TTAGCTCGTTAGAAA-TGC------------------------AAT---AAATAAGGAACAGA--------T--ATG--TGAGGGAATGA--------------TGG--------------ATGATTTT-T--GGAGTACACT----ATAGAGTTG---ATCTTCTCGATGG--TTTT-GGGGATACAATAAAGCTTTGATCCTGA----GAAAGACTCCTCTACT---TGTC---TT------------------TGCCGTTGGTGG------CTCCGTTTTCCTTGCC------------------C-TTCGGTTCGCTGTC---ATT
droBia1 scf7180000300910:1838619-1838919 - ACTTC----------CC-------------------------GA---A-AAACA------AT-------------------------------------------------------G--------------A-------------CA--ACAAGTA---TAAG---TTTAACTCTTCACACCAGGTG-----------ATTTA--------------------------ATAACTTAT------TCTTCAAGTCC-TTAGCTCGTTACAAA-TGC-----AA--------------TGAAAT---AAATAAGGAACATA--CATA--T--TTG--TGAGGGAATGA--------------CGG--------------GTGCTTTG----GCAGTGGAAT----ATGGAGTTG---ATTCTATCGATGA--TTTTAAGGAGTACCACAGGAATTCGATGATCTCCAG--GT--GGGCTCTACT---TGGCGGCGG---CGCTGGCCTTGGGGGTGCCGTTGGCCG------CTCCGTTCTCCTTGCC------------------C-TTCAGCTCGCTGGCCTGGTT
droTak1 scf7180000415664:262681-262949 - TTCCA----------GA-------------------------AA-AAA------------AG-------------------------------------------------------A--------------A-------------CA--ACAGAGA---TAAT---TTAAATTTTCCACACCAGGTGTACAAAT---GGTTTA--------------------------ATAAGTTAT------TTCTCAAGTCT-TTAGCTCGTTACAAA-TGC-----AA--------------TGCAAT---AAATAAGGAACATA--------A--ACG--CGGGGGAATGA--------------TGG--------------ATGATTCGGG--GGATTACAAT----ATAGAGTTG---ATTC----------------GGGAATACAATGGGATGTTGACCGACTCCAA--AT--CAGCTCTACT---TGGC---GC------------------TGCCGTTGGTGG------CTCCGTTCTCCTTGCC------------------C-TTCAGCTCGCTGGC---ATT
droEle1 scf7180000491193:3622562-3622807 + C-------------------------------------------------------------------------------------------------------------------------------------------AAAAGA---CACAAAAA---TCGT---TTAAATTTTTCACACCAGGTGTACAAAT---GATTTA--------------------------ATAGGTT-T------TCTTCAAGTCT-TTAGCTCGTTACAAA-TGC-----AA--------------TGCAAT---AAATAAGGAACATA--CATA--G--ATG--TGTGGGAATGA--------------TGG--------------GTGATTTG-G--AGAGTACAAT----GCTAAGATG---ATCCTGGCA--------------------------------------------AAGGTTCCTCTATTTCTTGGC---TG---CTCCAT---------TCTCCTTGGCGG------CTCCATTTTCCTTGTC------------------C-TTCGTCTCGCTGTC---ATT
droRho1 scf7180000775999:62476-62734 + TCTCC----------TA-------------------------GATCAT-AATCAAGAGA-------------------------------------------------------------------------AC------AAAAGACAACATA-AAA---GCAT---TTATATTTTCCACACCAGGTGAACAAAT---GATTTA--------------------------ATAAGTTAT------TCTTCAAGTCT-TTAGCTCTTTACAAA-AGC-----AA--------------TGCAAT---AAATAAGGAACATA--------C--ATG--TGAGGGAATGA--------------GAG--------------ATGAGTTG-G--GGAGTACAAT----ATAAAAGAG---A----------------------------------------------------A-A-GTATTCTACT---TGGTGGCGG---CTCCAT---------TCTCCTTTGCTG------CTCCATTCTCCTTGCC------------------C-TTTAGCTCGCTAGA---ATT
droFic1 scf7180000454065:2274624-2274886 - AAAAA----------CA-------------------------A---------------------------------------------------------------------------------------------------AAGAAACCAAAAAA------GT---TTCAATTTTTCACACCAGGTGAATAATG---GTTTTA--------------------------TTAAGTTGTTT----TTTTTAAGTCT-TTAGCTCATTACAAA-TGC-----GA--------------TGGAAT---AAATAAGGAACAGA--------T--TTT--TGGGGGAATGA--------------TGG--------------ATGATTTT-TGAGGGTTTCTTT----GTGAAGCAG---ATTCTCTTG---------------------------------------------CAGATTCTCTACT---TGGC---GGTGGCT---------------TTGTTGCTGG------CTCCATTTTCCTTGCCTTTCAGCTCGTTTTCCTTGCC-TGGCTCAGTGGA---ATT
droKik1 scf7180000302486:1908326-1908582 + ATTTC----------CA-------------------------AAATAA------------AT-------------------------------------------------------A--------------A-------------TACCACAGTT------AA---TTACATTTGCCACACCAGGTGAACAATA--TATTTTA--------------------------ATAAGTTAA------TTCTCAAGTCT-TTAGCTCATTACAAAATGC-----CA--------------GGCAAT---AAATAAGGAAGAGATACAGA------TG---CAGGGAATGA--------------TGGGGTTA--------ACTTCAAAT-G--GGAATACAATATTTGT---GATGATGATAACGTTG--------------------------------------------AT--CTCCTCTACT---TGGC---GT------------------TGCCATTGGCGG------AACCATTCTCCTTGCC------------------C-TTCTCCTCGGTGGT---GTT
droAna3 scaffold_13337:16960544-16960787 + ATTTT----------GT-------------------------AATTAAAAA------------------------------------------------------------------------------------------AGAAA---CACAAAA------AG----TGAAATTTGCACACCAGGTGTTGGCTA---TATT-T--------------------------TGAAATTAT------TTCTCAAGTCT--TGGCTC-TTACAAA-TGC-----AA--------------TATAATAATAAATAGGAAATG--------------GG--AATGGGAATGC--------------TGCGGGGCGAGTGAT-GATGAGTTT-TGAG--------GA-------ACT-G-----CCATTCGG-----------------------------------------TGATGGAATCTCTACT---TGGC---GC------------------TGCCGTTGCTGG------TTCCATTCTCGCTGCC------------------C-TTCTGCTCACTGGC---ATT
droBip1 scf7180000396641:450124-450355 + AATTT----------AA-------------------------ATTTTT---------------------------------------------------------------------------------------------AAAAC---CACAAAAG---T-AA----TTAAGTTTTCACACCAGGTGTTGCTAT---A--TTT--------------------------TTAAATTAT------TTCTCAAGTCT--TGGCTCGTTACAAA-TGC-----AA--------------TATAAT---AAATAGGATATG----------------------GAAATGG----------GAATGGG--------------ATGATTTT-TCAG--------GA-------ACT-G-----TAGTTCG------------GG----------------------------TAATGGAATCTCTACT---TGGC---GC------------------TGCCATTGCTGG------TTCCATTCTCGCTACC------------CTTCTCC-TTCTGCTCACTGGC---GTT
dp5 XR_group3a:1451361-1451635 - GTTTC----------CC-------------------------TTTAAA-AAACAAAACA-------------------------------------------------------------------------GCCCAAGA------AATCACT-CA------GTTACGTTGATTTTTCACACCAGGTGTATACATACATATTTA--------------------------ATAAATTAT------TTCTCAAGTCT-TTAGCTCGTTACAAA-TGC-----GTT-------------TTGAAT---AAATAGGTTACAGATTCAGG--T--ATG--TGAGGGAATGA--------------TGGGTGTG--------------GAT-TG-ACAATGCAAGA-------ACTTG---ATATCATTGATGGCATTTT------------------------------------G-GCATTCTACT---TGGA---GG------------------TGCCATGGGCAG------AGCCGTTCTCCTTGCC------------------C-TTATCCTCGACGGC---GTT
droPer2 scaffold_23:1485938-1486212 - CTTTC----------CC-------------------------TTTAAA-AAACAAAACA-------------------------------------------------------------------------GCCCAAGA------AATCACT-CA------GTTACGTTGATTTTTCACACCAGGTGTATACATACATATTTA--------------------------ATAAATTAT------TTCTCAAGTCT-TTAGCTCGTTACAAA-TGC-----GTT-------------TTGAAT---AAATAGGTTACAGATTCAGG--T--ATG--TGAGGGAATGA--------------TGGGTGTG--------------GAT-TG-ACAATGCAAGA-------ACTTG---ATATCATTGATGGCATTTT------------------------------------G-GCATTCTACT---TGGA---GC------------------TGCCATGGGCAG------AGCCGTTCTCCTTGCC------------------C-TTATCCTCGACGGC---GTT
droWil2 scf2_1100000004511:11188459-11188698 + AATTT----------CG-------------------------AC-AAA----------------------------------------------------------------------------------ATAA-------------A-----AAAAGTGTAAT---TTTAAATTTTGAAGCCAT-T--------------GAGTATTGTAGTAAGTTGAAAAAAAAACTTTAGTTTAT------TACACAAATCT-TTTGCTTAATACAGA---------AA--------------TGCAAT---AAATAAATTAT----------------GATGGAGGAAATGG--------------TGG-TGTG--------------GGC-CG-G----GCAA----------------------CAAA-------------------------G----------------GAATGGTACTACTGCT---TGGC---AC------------------TGCCGTTTGTAGCCTTGGTTTTGACCTCCTTGTC------------------A-CTATCTTCGGGACG---GTT
droVir3 scaffold_13049:19486862-19487099 - CTACA----------TT-------------------------GA---A-GAAGA-----AGC------------------------------------------------------------------------------------------A---------AC---TTTTGAGTTCCGTTTCAGTT-----------GGTTTA--C-----------------------TAAGATTAT-TTTA--TTATTAGTCT-TTAGCTCGTTATACT-ATTTATGGTA--------------ACTAAT---AAAT-------A----CATAGGTATGTG--ATGATGAATGAGCAGGAACAGGAA-TGGGTGTG-----------------------------------------GCG---GCCAGCTAG---------------------------------------------C--AGCTTCTACTTCTTGGC---GG---GCT------------TGCCGTTGGTGG------CCTCGGCCTTTGACTC------------CTCCGGC-TTCTGCTCGACGGC---ATT
droMoj3 scaffold_6680:7190372-7190603 + CGGAT----------GA-------------------------AA-AA-------------AT-------------------------------------------------------T--------------A-------------CA---CG-----------------AAATTTGGTTATTAGTTTTACAAAC---ATTTTA--------------------------TTTTTCACTTTTTAACATATTAGTCT-TTTGCTCATTACAAT-AAATATGACTTTTTAATAAATACATGCAAT---ACATGAAA--------------T--ATG--ATGAGAAATGA--------------GG-----------TTGACTTTGGTT-TA---------------------ACG---TTGA--TCG----C----T------------------------------------G-GCTTTCTATT---TGGT---GTTG---T------------TTCCATTGGTGG------GGGTCTTCGGCTTGGA------------------C-T------CTTCCTC---GTT
droGri2 scaffold_15110:17165416-17165554 + T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCT-TT-GCTCGTTACAAT-AAA-----TA--------------TG--------------A----------------------ATGATGAATGA--------------GG-----------ATGACTGATGA------------AAG------------G-----CTGATTGA-----------------------------------------TGAT--TGATTCTACT---TGGT---GT------------------TGCCAGTGCCCG------ACTTGGATTTTGGATC---------GTTTTGCTGC-TTGTGATCCACATC---GTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATTTC----------CA-------------------------AATCAA----------------------------------------------------------------------------------ATAC------AAAAGT---CACAACA------AT---TTTAATTTTCCACACCAGGTGAACAAAA---GATTTA--------------------------TTAAATTATTATGAGTATTCTAGTCT-TTAGCTCATTACAAA-TGC-----AA--------------TGCAAT---AAATTAGGAACAAT--------T--AAG--TTGGGGAATGA--------------TG-----------ATGGGTGATGAT-GG---------------------ACG---ATCTTCTCG--------------------------------------------GTGGCTCGTTTACT---TGTC---CT------------------TGCCGTTGGGTG------CTCCGTTCTCCTTGCC---------GTCCTTGCCC-TTCACCTCGCTATC---GTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTC---CT------------------TGCCGTTGGGTG------CTC.....................................................2112.00220000000000000000
..........................................................................................................................................................................................................................................................................................................................................................A--------------TG-----------ATGGGTGATGAT-GG---------------------ACG---A..........................................................................................................................................................................2112.00200000000000002000
...............................................................................................................................................................................................................................................................................................................................................................................................GAT-GG---------------------ACG---ATCTTCTCG--------------------------------------------GTGGC.................................................................................................................2211.00100000000000001000
.......................................................................................................................................................CAACA------AT---TTTAATTTTCCA........................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTC---CT------------------TGCCGTTGGGTG------C.......................................................1911.00100000100000000000
............................................................................................................................................................................................................................................................................................................................................................................................GATGAT-GG---------------------ACG---ATCTTCTCG--------------------------------------------GTT...................................................................................................................2311.00100000000000001000
........................................................................................................................................................................................................................................................................................................................................................TGA--------------TG-----------ATGGGTGATGAT-GG---------------------ATT---T..........................................................................................................................................................................2320.50100000000000001000
droSec2
ATTTC----------CA-------------------------AATCAA----------------------------------------------------------------------------------ATAC------AAAAGT---CACA---------AT---TTTAATTTTCCACACCAGGTGAACAAAA---GATTTA--------------------------TTAAATTATTATGAGTATTCTAGTCT-TTAGCTCATTACAAA-TGC-----AA--------------TGCAAT---AAATTAGGAACAAT--------T--AAG--TAGGGGAATGA--------------TG-----------ATGGGTGATGAT-GG---------------------ATG---ACTTTCTCG--------------------------------------------GTGGCTCCTTTACT---TGTC---CT------------------TGCCATTGGGTG------CTCCGTTCTCCTTGCC---------GTCCTTGCCC-TTCACCTCGCTATC---GTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................................................................................................ATGAGTATTCTAGTCT-TTAGC.....................................................................................................................................................................................................................................................................................................................................2111.0011000
...................................................................................................................................................................................................................................................................................................................................................................................................GG---------------------ATG---ACTTTCTCG--------------------------------------------GTGGCTC...............................................................................................................2111.0010001
........................................................................................................................................................................................................................................................................................................................................................TGA--------------TG-----------ATGGGTGATGAT-GG---------------------AT...............................................................................................................................................................................2111.0010100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACT---TGTC---CT------------------TGCCATTGGGTG------CT......................................................2311.0010001
......................................................................................................................................................................................CAGGTGAACAAAA---GATTTA--------------------------TT...................................................................................................................................................................................................................................................................................................................................................................2111.0010100
dm3
ATTTC----------CA-------AATATTTGCCTC------TTTCAA-AAACCA------------------------------------------------------------------ACTTTCAT-ATAC------AAAAGT---CACAACA------AT---TTTAATTTTCCACACCAGGTGAACAAAA--GGATTTA--------------------------TTAAATTAATATGAGTATTCTAGTCT-TTAGCTCATTACAAA-TAC-----AA--------------TGCAAT---AAATTAGGAACAAT--------T--AAG--TAGGGGAATGA--------------TG-----------ATGGATGATGTT-GG---------------------ATG---AT------G--------------------------------------------ATGGCTCCTTTACT---TGTC---CT------------------TGCCGTTGGGTG------CTCCGTTCTCCTTGCC------------------C-TTCACCTCGCTTTC---ATTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................T--------T--AAG--TAGGGGAATGA--------------TG-----------ATG..................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................GATGATGTT-GG---------------------ATG---AT------G--------------------------------------------ATGG..................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000020
.............................................................................................................................................................................................................................................................TCT-TTAGCTCATTACAAA-TAC-----..................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TTAATATGAGTATTCTAGTCT-..........................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TTAATATGAGTATTCTAGTCT-T.........................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AACAAT--------T--AAG--TAGGGGAATGA--------------..................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................GGAACAAT--------T--AAG--TAGGGGAAT..................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CATTACAAA-TAC-----AA--------------TGCAAT---A........................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TAGGGGAATGA--------------TG-----------ATGGATGA.............................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TGATGTT-GG---------------------ATG---AT------G--------------------------------------------ATGGCT................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTC---CT------------------TGCCGTTGGGTG------CTCCGT..................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................GA--------------TG-----------ATGGATGATGTT-GG---------------------ATG---A..........................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TGATGTT-GG---------------------ATG---AT------G--------------------------------------------ATGG..................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TGTT-GG---------------------ATG---AT------G--------------------------------------------ATGGCTCCT.............................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TGA--------------TG-----------ATGGATGATGTT-GG---------------------ATG---A..........................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTTCTCCTTGCC------------------C-TTCACCTCG...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GGGAATGA--------------TG-----------ATGGATGATGTT-GG---------------------A................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............................................................................................................................................................................................................................................TATGAGTATTCTAGTCT-TAG.......................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................AAG--TAGGGGAATGA--------------TG-----------ATGGC................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
...........................................................................................................................................................................................................................................................................................................................................AAG--TAGGGGAATGA--------------TG-----------ATGG.................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................................................................................................................................................................................................................................................................A--------------TG-----------ATGGATGATGTT-GG---------------------ATG---AA------...................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................................................................................................................................................................................................................................................................................................TG-----------ATGGATGATGTT-GG---------------------ATG---AT------C--------------------------------------------......................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................ATGGATGATGTT-GG---------------------ATG---AT------G--------------------------------------------A.....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................AT--------T--AAG--TAGGGGAATGA--------------TG-----------A....................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................................................................GTATTCTAGTCT-TTAGCTCAT.................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTC---CT------------------TGCCGTTGGGTG------CTC.....................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................ATTAATATGAGTATTCTAGTA............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................GAACAAAA--GGATTTA--------------------------TTAAAT...............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TT-GG---------------------ATG---AT------G--------------------------------------------ATGGCTCCTTTA..........................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................ATTAATATGAGTATTCTAGTCT-..........................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCC------------------C-TTCACCTCGCTTT.......1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................ATTTA--------------------------TTAAATTAATATGA.......................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TTAATATGAGTATTCTAGTCT-TT........................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................ATGA--------------TG-----------ATGGATGATGTT-GG---------------------AT...............................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTTACT---TGTC---CT------------------TGCCGTTGGG................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................................................................................................................TGAGTATTCTAGTCT-TTAGCTCC..................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................TATGAGTATTCTAGTCT-TTAG......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC---CT------------------TGCCGTTGGGTG------CTCCG...................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GGGAATGA--------------TG-----------ATGGATGATGT..........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................CAAA-TAC-----AA--------------TGCAAT---AAATTAGGAACA.............................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................ATGTT-GG---------------------ATG---AT------G--------------------------------------------ATGGCTCC..............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................AAG--TAGGGGAATGA--------------TG-----------ATGGATGATG...........................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................................................................................................................................................................................................................................................................................................................................................TGA--------------TG-----------ATGGATGATGTT-GG---------------------T................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................AAG--TAGGGGAATGA--------------TG-----------ATGGG................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................A--------------TG-----------ATGGATGATGTT-GG---------------------G................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................................GGTGAACAAAA--GGATC.................................................................................................................................................................................................................................................................................................................................................................................................1640.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATTATT--------TTAAAGGCAGAATGACAG-CTCTATCCAAAGCA--------------------------------------------------------------------------ACTATCATAATAC------AAAATT---CACAGAA------CT---TGTAAAATTTCACACCAGGTGTACAAAT---GATTTA--------------------------TTAAATTATTATGAGTATTCTAGTCTTTTAGTTCATTACAAG-TGC-----AA--------------TGCAAT---AAATTAGGAACAAT--------T--AAG--TGGGGGAATGA--------------TG-----------ATGGGTGATATT-A--GGAGTACAAT----AA--AGATG---ATCTTCTTG--------------------------------------------GTGGCACCTTTACT---TGTC---CT------------------TGCCATTGGTTG------CTCCGTTCTCTTTGCC------------------C-TTCACCTCGCTGGC---ATTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................TTTA--------------------------TTAAATTATTATGAGTA....................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.........................ATGACAG-CTCTATCCAAAGCA--------------------------------------------------------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
...........................................................................................................................TATCATAATAC------AAAATT---CACAGAA------.........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
...........................................................................................................................................................................AAATTTCACACCAGGTGTACA...........................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.......................GAATGACAG-CTCTATCCAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
ATTATT--------TTAAAGGCAGAATGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
........................AATGACAG-CTCTATCCAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
...............................................................................................................................................................................TTCACACCAGGTGTACAAA.........................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
droYak3
ATTAA----------TA-------------------------AACTAT---------------------------------------------------------------------ACCAACTAGCATAATAC------AAAAAT---AACAAAG------TT---CGTAAATTTTCACACCAGGTGTACAAAT---GATTTA--------------------------TTAAATTATTATGAGTATTCAAGTCT-TTAGCTCATTACAAA-TGC-----AA--------------TGCAAT---AAATTAGGAACAAT--------T--AAG--TGGGGGAATGA--------------TG-----------ATGGGTGACATT-G--GGAGTAAAAT----ATG--GATG---AACTCCTCG--------------------------------------------GTGGCTCCTTTACT---TGTC---CT------------------TGCCGTTGGTGG------CTCCGTTCTCCTTGCC------------------C-TTCAACTCGCTGGC---ATTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
AATTTCAACTTATGTTT-------------------------TT---G-GAAGA-----TGTTACTTTTTTTCGCCTCACAAATTTTTGCCATAAAAAATTCTTTTTTTTTTATTCTCCCAA---TCAC-ATA-------AAAAAA---CACAAAAA---GCAT---TTACATTTTCCACACCAGGTGAACAAAT---TGTTTA--------------------------ATAAGTTAT------TCTTCAAGTCT-TTAGCTCGTTAGAAA-TGC------------------------AAT---AAATAAGGAACAGA--------T--ATG--TGAGGGAATGA--------------TGG--------------ATGATTTT-T--GGAGTACACT----ATAGAGTTG---ATCTTCTCGATGG--TTTT-GGGGATACAATAAAGCTTTGATCCTGA----GAAAGACTCCTCTACT---TGTC---TT------------------TGCCGTTGGTGG------CTCCGTTTTCCTTGCC------------------C-TTCGGTTCGCTGTC---ATTSizeHit CountTotal NormTotal
No Reads
droBia1
ACTTC----------CC-------------------------GA---A-AAACA------AT-------------------------------------------------------G--------------A-------------CA--ACAAGTA---TAAG---TTTAACTCTTCACACCAGGTG-----------ATTTA--------------------------ATAACTTAT------TCTTCAAGTCC-TTAGCTCGTTACAAA-TGC-----AA--------------TGAAAT---AAATAAGGAACATA--CATA--T--TTG--TGAGGGAATGA--------------CGG--------------GTGCTTTG----GCAGTGGAAT----ATGGAGTTG---ATTCTATCGATGA--TTTTAAGGAGTACCACAGGAATTCGATGATCTCCAG--GT--GGGCTCTACT---TGGCGGCGG---CGCTGGCCTTGGGGGTGCCGTTGGCCG------CTCCGTTCTCCTTGCC------------------C-TTCAGCTCGCTGGCCTGGTTSizeHit CountTotal NormTotal
No Reads
droTak1
TTCCA----------GA-------------------------AA-AAA------------AG-------------------------------------------------------A--------------A-------------CA--ACAGAGA---TAAT---TTAAATTTTCCACACCAGGTGTACAAAT---GGTTTA--------------------------ATAAGTTAT------TTCTCAAGTCT-TTAGCTCGTTACAAA-TGC-----AA--------------TGCAAT---AAATAAGGAACATA--------A--ACG--CGGGGGAATGA--------------TGG--------------ATGATTCGGG--GGATTACAAT----ATAGAGTTG---ATTC----------------GGGAATACAATGGGATGTTGACCGACTCCAA--AT--CAGCTCTACT---TGGC---GC------------------TGCCGTTGGTGG------CTCCGTTCTCCTTGCC------------------C-TTCAGCTCGCTGGC---ATTSizeHit CountTotal NormTotal
No Reads
droEle1
C-------------------------------------------------------------------------------------------------------------------------------------------AAAAGA---CACAAAAA---TCGT---TTAAATTTTTCACACCAGGTGTACAAAT---GATTTA--------------------------ATAGGTT-T------TCTTCAAGTCT-TTAGCTCGTTACAAA-TGC-----AA--------------TGCAAT---AAATAAGGAACATA--CATA--G--ATG--TGTGGGAATGA--------------TGG--------------GTGATTTG-G--AGAGTACAAT----GCTAAGATG---ATCCTGGCA--------------------------------------------AAGGTTCCTCTATTTCTTGGC---TG---CTCCAT---------TCTCCTTGGCGG------CTCCATTTTCCTTGTC------------------C-TTCGTCTCGCTGTC---ATTSizeHit CountTotal NormTotal
No Reads
droRho1
TCTCC----------TA-------------------------GATCAT-AATCAAGAGA-------------------------------------------------------------------------AC------AAAAGACAACATA-AAA---GCAT---TTATATTTTCCACACCAGGTGAACAAAT---GATTTA--------------------------ATAAGTTAT------TCTTCAAGTCT-TTAGCTCTTTACAAA-AGC-----AA--------------TGCAAT---AAATAAGGAACATA--------C--ATG--TGAGGGAATGA--------------GAG--------------ATGAGTTG-G--GGAGTACAAT----ATAAAAGAG---A----------------------------------------------------A-A-GTATTCTACT---TGGTGGCGG---CTCCAT---------TCTCCTTTGCTG------CTCCATTCTCCTTGCC------------------C-TTTAGCTCGCTAGA---ATTSizeHit CountTotal NormTotal
No Reads
droFic1
AAAAA----------CA-------------------------A---------------------------------------------------------------------------------------------------AAGAAACCAAAAAA------GT---TTCAATTTTTCACACCAGGTGAATAATG---GTTTTA--------------------------TTAAGTTGTTT----TTTTTAAGTCT-TTAGCTCATTACAAA-TGC-----GA--------------TGGAAT---AAATAAGGAACAGA--------T--TTT--TGGGGGAATGA--------------TGG--------------ATGATTTT-TGAGGGTTTCTTT----GTGAAGCAG---ATTCTCTTG---------------------------------------------CAGATTCTCTACT---TGGC---GGTGGCT---------------TTGTTGCTGG------CTCCATTTTCCTTGCCTTTCAGCTCGTTTTCCTTGCC-TGGCTCAGTGGA---ATTSizeHit CountTotal NormTotal
No Reads
droKik1
ATTTC----------CA-------------------------AAATAA------------AT-------------------------------------------------------A--------------A-------------TACCACAGTT------AA---TTACATTTGCCACACCAGGTGAACAATA--TATTTTA--------------------------ATAAGTTAA------TTCTCAAGTCT-TTAGCTCATTACAAAATGC-----CA--------------GGCAAT---AAATAAGGAAGAGATACAGA------TG---CAGGGAATGA--------------TGGGGTTA--------ACTTCAAAT-G--GGAATACAATATTTGT---GATGATGATAACGTTG--------------------------------------------AT--CTCCTCTACT---TGGC---GT------------------TGCCATTGGCGG------AACCATTCTCCTTGCC------------------C-TTCTCCTCGGTGGT---GTTSizeHit CountTotal NormTotal
No Reads
droAna3
ATTTT----------GT-------------------------AATTAAAAA------------------------------------------------------------------------------------------AGAAA---CACAAAA------AG----TGAAATTTGCACACCAGGTGTTGGCTA---TATT-T--------------------------TGAAATTAT------TTCTCAAGTCT--TGGCTC-TTACAAA-TGC-----AA--------------TATAATAATAAATAGGAAATG--------------GG--AATGGGAATGC--------------TGCGGGGCGAGTGAT-GATGAGTTT-TGAG--------GA-------ACT-G-----CCATTCGG-----------------------------------------TGATGGAATCTCTACT---TGGC---GC------------------TGCCGTTGCTGG------TTCCATTCTCGCTGCC------------------C-TTCTGCTCACTGGC---ATTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................................................................................................................TGAT-GATGAGTTT-TGAG--------GA-------AC.................................................................................................................................................................................2111.001000001
..............................................AAAAA------------------------------------------------------------------------------------------AGAAA---CACAAAA------AG----A..................................................................................................................................................................................................................................................................................................................................................................................................................................20180.061010000
droBip1
AATTT----------AA-------------------------ATTTTT---------------------------------------------------------------------------------------------AAAAC---CACAAAAG---T-AA----TTAAGTTTTCACACCAGGTGTTGCTAT---A--TTT--------------------------TTAAATTAT------TTCTCAAGTCT--TGGCTCGTTACAAA-TGC-----AA--------------TATAAT---AAATAGGATATG----------------------GAAATGG----------GAATGGG--------------ATGATTTT-TCAG--------GA-------ACT-G-----TAGTTCG------------GG----------------------------TAATGGAATCTCTACT---TGGC---GC------------------TGCCATTGCTGG------TTCCATTCTCGCTACC------------CTTCTCC-TTCTGCTCACTGGC---GTTSizeHit CountTotal NormTotal
No Reads
dp5
GTTTC----------CC-------------------------TTTAAA-AAACAAAACA-------------------------------------------------------------------------GCCCAAGA------AATCACT-CA------GTTACGTTGATTTTTCACACCAGGTGTATACATACATATTTA--------------------------ATAAATTAT------TTCTCAAGTCT-TTAGCTCGTTACAAA-TGC-----GTT-------------TTGAAT---AAATAGGTTACAGATTCAGG--T--ATG--TGAGGGAATGA--------------TGGGTGTG--------------GAT-TG-ACAATGCAAGA-------ACTTG---ATATCATTGATGGCATTTT------------------------------------G-GCATTCTACT---TGGA---GG------------------TGCCATGGGCAG------AGCCGTTCTCCTTGCC------------------C-TTATCCTCGACGGC---GTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................TTGATTTTTCACACCAGGTGT..............................................................................................................................................................................................................................................................................................................................................................................................................2114.0040300001000
.............................................................................................................................................................................................................................................AT------TTCTCAAGTCT-TTAGCTCG..................................................................................................................................................................................................................................................................................................................................2114.0041100002000
.....................................................................................................................................................................................................................................................TTCTCAAGTCT-TTAGCTCGTT................................................................................................................................................................................................................................................................................................................................2113.0030100002000
...............................................................................................................................................................................TTCACACCAGGTGTATACAT........................................................................................................................................................................................................................................................................................................................................................................................................2013.0030300000000
........................................................................................................................................................................TTGATTTTTCACACCAGGTG...............................................................................................................................................................................................................................................................................................................................................................................................................2013.0030300000000
............................................................................................................................................................................................................................................TAT------TTCTCAAGTCT-TTAGCTC...................................................................................................................................................................................................................................................................................................................................2112.0020200000000
..............................................................................................................................................................................TTTCACACCAGGTGTATACAT........................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
............................................................................................................................................................................TTTTTCACACCAGGTGTATAC..........................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
.....................................................................................................................................................................................................................................................TTCTCAAGTCT-TTAGCTCGTTAA..............................................................................................................................................................................................................................................................................................................................2312.0020200000000
..............................................................................................................................................................................................................................................T------TTCTCAAGTCT-TTAGCTCGT.................................................................................................................................................................................................................................................................................................................................2112.0020200000000
.........................................................................................................................................................................................................................................AATTAT------TTCTCAAGTCT-TTA.......................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........................................................................................................................................................................................................................................TTAT------TTCTCAAGTCT-TTAGCTCGTT................................................................................................................................................................................................................................................................................................................................2511.0010000001000
..............................................................................................................................................................................................................................................T------TTCTCAAGTCT-TTAGCTCGTT................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.........................................................................................................................................AGA------AATCACT-CA------GTTACGTTGATTT............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
......................................................................................................................................................................CGTTGATTTTTCACACCAGG.................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
....................................................................................................................................................................TACGTTGATTTTTCACACCAG..................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................................................................TCTCAAGTCT-TTAGCTCGTTAA..............................................................................................................................................................................................................................................................................................................................2211.0010000001000
.....................................................................................................................................................................................................................................................TTCTCAAGTCT-TTAGCTCGTTA...............................................................................................................................................................................................................................................................................................................................2211.0010100000000
..............................................................................................................................................................................................TACATACATATTTA--------------------------ATAAATT..............................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................................................................................................................................AAGTCT-TTAGCTCGTTAA..............................................................................................................................................................................................................................................................................................................................1811.0010100000000
.........................................................................................................................................................................TGATTTTTCACACCAGGTGTA.............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................................................................TCTCAAGTCT-TTAGCTCGTT................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.................................................AAACAAAACA-------------------------------------------------------------------------GCCCAAGA------AATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
........................................................................................................................................................................................................................................AAATTAT------TTCTCAAGTCT-TTA.......................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.................................................................................................................................................................................CACACCAGGTGTATACATAC......................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...................................................................................................................................................................................................ACATATTTA--------------------------ATAAATTAT------TTCTCAAG..............................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.............................................................................................................................................................................................................................................................................................................................AGATTCAGG--T--ATG--TGAGG......................................................................................................................................................................................................................................................1811.0010100000000
...............................................................................................................................................................................TTCACACCAGGTGTATACATA.......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................................................CAAAACA-------------------------------------------------------------------------GCCCAAGA------AATCACT-.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
.............................................................................................................................................................................................................................................AT------TTCTCAAGTCT-TTAGCTCGT.................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.....................................................................................................................................................................ACGTTGATTTTTCACACCAGG.................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................CTCAAGTCT-TTAGCTCGTTAA..............................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................................................................TCTCAAGTCT-TTAGCTCGTTA...............................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................ACACCAGGTGTATACATA.......................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.......................................................................................................................................................................................................................................TAAATTAT------TTCTCAAGTCT-TT........................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........................................................................................................................................................................TGATTTTTCACACCAGGTGT..............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..............................................................................................................................................................................................................................................T------TTCTCAAGTCT-TTAGCTCG..................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
CTTTC----------CC-------------------------TTTAAA-AAACAAAACA-------------------------------------------------------------------------GCCCAAGA------AATCACT-CA------GTTACGTTGATTTTTCACACCAGGTGTATACATACATATTTA--------------------------ATAAATTAT------TTCTCAAGTCT-TTAGCTCGTTACAAA-TGC-----GTT-------------TTGAAT---AAATAGGTTACAGATTCAGG--T--ATG--TGAGGGAATGA--------------TGGGTGTG--------------GAT-TG-ACAATGCAAGA-------ACTTG---ATATCATTGATGGCATTTT------------------------------------G-GCATTCTACT---TGGA---GC------------------TGCCATGGGCAG------AGCCGTTCTCCTTGCC------------------C-TTATCCTCGACGGC---GTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................GTTACGTTGATTTTTCACA......................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..........................................................................................................................................................................GATTTTTCACACCAGGTGTA.............................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...........................................................................................................................................................................ATTTTTCACACCAGGTGTATA...........................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
droWil2
AATTT----------CG-------------------------AC-AAA----------------------------------------------------------------------------------ATAA-------------A-----AAAAGTGTAAT---TTTAAATTTTGAAGCCAT-T--------------GAGTATTGTAGTAAGTTGAAAAAAAAACTTTAGTTTAT------TACACAAATCT-TTTGCTTAATACAGA---------AA--------------TGCAAT---AAATAAATTAT----------------GATGGAGGAAATGG--------------TGG-TGTG--------------GGC-CG-G----GCAA----------------------CAAA-------------------------G----------------GAATGGTACTACTGCT---TGGC---AC------------------TGCCGTTTGTAGCCTTGGTTTTGACCTCCTTGTC------------------A-CTATCTTCGGGACG---GTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................TTAT----------------GATGGAGGAAATGG--------------TGG-..............................................................................................................................................................................................................................2111.00100001
...............................................................................................................................................................................TTGAAGCCAT-T--------------GAGTATTGTAGTAAG...................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
droVir3
CTACA----------TT-------------------------GA---A-GAAGA-----AGC------------------------------------------------------------------------------------------A---------AC---TTTTGAGTTCCGTTTCAGTT-----------GGTTTA--C-----------------------TAAGATTAT-TTTA--TTATTAGTCT-TTAGCTCGTTATACT-ATTTATGGTA--------------ACTAAT---AAAT-------A----CATAGGTATGTG--ATGATGAATGAGCAGGAACAGGAA-TGGGTGTG-----------------------------------------GCG---GCCAGCTAG---------------------------------------------C--AGCTTCTACTTCTTGGC---GG---GCT------------TGCCGTTGGTGG------CCTCGGCCTTTGACTC------------CTCCGGC-TTCTGCTCGACGGC---ATTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................TAGCTCGTTATACT-ATTTATG...................................................................................................................................................................................................................................................................................................................2112.002001000010000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TAGTCT-TTAGCTCGTTATACT-..........................................................................................................................................................................................................................................................................................................................2112.002020000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................G--ATGATGAATGAGCAGGAACA.......................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................TT-----------GGTTTA--C-----------------------TAAGATTAT-TTT........................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TG--ATGATGAATGAGCAGGAACAGGA....................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000100000000000000000000000
......................................................................................................................................................................................................................................................TTATTAGTCT-TTAGCTCGTTA...............................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................AACAGGAA-TGGGTGTG-----------------------------------------GCG---GC.........................................................................................................................................................................2111.001000000000000000000001000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................AAAT-------A----CATAGGTATGTG--ATGA.......................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................AT-------A----CATAGGTATGTG--ATGATG.....................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................AT---AAAT-------A----CATAGGTATGTG--AT.........................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TTA--C-----------------------TAAGATTAT-TTTA--TTATT................................................................................................................................................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................GTA--------------ACTAAT---AAAT-------A----CATAGGT..................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TAAGATTAT-TTTA--TTATTAGT.............................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................TTTCAGTT-----------GGTTTA--C-----------------------TAAGATT..............................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................A--TTATTAGTCT-TTAGCTCGTT................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................TTTCAGTT-----------GGTTTA--C-----------------------TAAGA................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
...........................................................AGC------------------------------------------------------------------------------------------A---------AC---TTTTGAGTTCCGTTTCAGTT-----------.....................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACTTCTTGGC---GG---GCT------------TGC.......................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................................................GTCT-TTAGCTCGTTATACT-AT........................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................AAAT-------A----CATAGGTATGTG--ATG........................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
CGGAT----------GA-------------------------AA-AA-------------AT-------------------------------------------------------T--------------A-------------CA---CG-----------------AAATTTGGTTATTAGTTTTACAAAC---ATTTTA--------------------------TTTTTCACTTTTTAACATATTAGTCT-TTTGCTCATTACAAT-AAATATGACTTTTTAATAAATACATGCAAT---ACATGAAA--------------T--ATG--ATGAGAAATGA--------------GG-----------TTGACTTTGGTT-TA---------------------ACG---TTGA--TCG----C----T------------------------------------G-GCTTTCTATT---TGGT---GTTG---T------------TTCCATTGGTGG------GGGTCTTCGGCTTGGA------------------C-T------CTTCCTC---GTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCT-TT-GCTCGTTACAAT-AAA-----TA--------------TG--------------A----------------------ATGATGAATGA--------------GG-----------ATGACTGATGA------------AAG------------G-----CTGATTGA-----------------------------------------TGAT--TGATTCTACT---TGGT---GT------------------TGCCAGTGCCCG------ACTTGGATTTTGGATC---------GTTTTGCTGC-TTGTGATCCACATC---GTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 02:29 PM