dsi_11111

exon [2r_9963085_9963740_+]; CDS [2r_9963085_9963626_+]; CDS [2r_9963085_9963587_+]; exon [2r_9962813_9963025_+]; CDS [2r_9962813_9963025_+]; CDS [2r_9962813_9963025_+]; exon [2r_9962813_9963025_+]; exon [2r_9963085_9963587_+]; intron [2r_9963026_9963084_+]; intron [2r_9963026_9963084_+]

##################################################-----------------------------------------------------------################################################## CGATGAGGCGGGCAACACGTTTGTTAACCGAAAGAACGCTGGTGGACCAGGTAAGCTTAAGTCTCTATACAGATTCTCCAAGATTCTAACGCTATGTTCATAATTTCAGCTTCCCACACCATCAGTGGCCCCAGTTATTCCGCCCAAAACGTAGGTTCC ************************************************...(((((((((((................))))).))).)))................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553486 Makindu_3 day-old ovaries	SRR553485 Chicharo_3 day-old ovaries	M023 head	SRR902009 testis	SRR618934 dsim w501 ovaries
.........................CACCGAAAGACCGCTGATGGA.................................................................................................................	21	3	3	5.00	15	15	0	0	0	0
.....................TGTTAACCGAAAGAACGCTGGTGG..................................................................................................................	24	0	1	2.00	2	0	0	2	0	0
........................TAATCGAAAGAACGCTGGTGG..................................................................................................................	21	1	1	2.00	2	0	2	0	0	0
......................................................................................................................CCATCAGTCGCCCCA..........................	15	1	7	1.29	9	5	4	0	0	0
............................CGAAAGAACGCTGGTGGACCA..............................................................................................................	21	0	1	1.00	1	0	0	0	1	0
..........................ACCGAAAGACCGCTGATGGAA................................................................................................................	21	3	2	1.00	2	2	0	0	0	0
..........................ACCGAAAGACCGCTGATGGA.................................................................................................................	20	2	2	0.50	1	1	0	0	0	0
.........................CACCGAAAGACCGCTGATGG..................................................................................................................	20	3	5	0.20	1	1	0	0	0	0
.....................................GCTGGCGGACCAGGTA..........................................................................................................	16	1	10	0.10	1	0	0	0	0	1
.................CGGTTGTTAACCGAA...............................................................................................................................	15	1	13	0.08	1	1	0	0	0	0
..................GTTAGTTAACCGAAA..............................................................................................................................	15	1	18	0.06	1	0	0	0	0	1
....................................................................................................................CCCCATCAGTCGCCCCA..........................	17	2	19	0.05	1	0	1	0	0	0
.............................................ACCAGGTGAGCTTGACTCT...............................................................................................	19	3	20	0.05	1	0	0	0	0	1
............................................................................................................GCTTCCGACACCGTCAGC.................................	18	3	20	0.05	1	1	0	0	0	0

GCTACTCCGCCCGTTGTGCAAACAATTGGCTTTCTTGCGACCACCTGGTCCATTCGAATTCAGAGATATGTCTAAGAGGTTCTAAGATTGCGATACAAGTATTAAAGTCGAAGGGTGTGGTAGTCACCGGGGTCAATAAGGCGGGTTTTGCATCCAAGG ************************************************...(((((((((((................))))).))).)))................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553486 Makindu_3 day-old ovaries	SRR553487 NRT_0-2 hours eggs	SRR618934 dsim w501 ovaries	M023 head	SRR553488 RT_0-2 hours eggs	SRR902008 ovaries
.........................ATGGCTTTCTGGCGACTACC..................................................................................................................	20	3	2	1.00	2	2	0	0	0	0	0
..............................................................................................................AAGGATGTAGTAGTCACCGGAGT..........................	23	3	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................GTCACCGGGGTCAAT......................	15	0	2	0.50	1	0	0	1	0	0	0
.......................................................................CTAAATGGTTCTAAGATT......................................................................	18	2	4	0.25	1	0	0	0	1	0	0
.........................ATGGCTTTCTGGCGACTAC...................................................................................................................	19	3	11	0.18	2	2	0	0	0	0	0
.........................................................................................................AGTCGAAGGGTGTGC.......................................	15	1	6	0.17	1	0	0	0	0	1	0
.......................................................................................TTGCGGTAAAAGTATTAGAGT...................................................	21	3	8	0.13	1	0	0	0	0	0	1
......................................................................TCTAAGAGGCTTTAAGAGTG.....................................................................	20	3	10	0.10	1	1	0	0	0	0	0
....................................................TCCGCAGTCAGAGATATG.........................................................................................	18	3	20	0.05	1	0	1	0	0	0	0
...............................................................................................................................................GGTTTTCCATGCAAGG	16	2	20	0.05	1	0	0	0	0	1	0

Species	Coordinate	ID	Alignment
droSim2	2r:9962976-9963134 +	dsi_11111	CGATGAGGCGGGCAACACGTTTGTTAACCGAAAGAACG---CTGGTGGACCAGGTAAGC-----------------TT-----AAG-------TCTC----TATACAGATT-----------------CTCCAAG-----ATTCTA---A------CGCTAT-GTTCATAATTTCAGCTTCCCACACCATCAGTGGCCCCAGTTATTCCGCCCAAAACGT------------------AGGTT-----------------------------CC
droSec2	scaffold_1:6818030-6818188 +		CGATGAGGCGGGCAACACGTTTGTTAACCGAAAGAACG---TTGGTGGACCAGGTAAGT-----------------TT-----AGG-------TCTC----TATACGGATT-----------------CTCCAAG-----ATTCTA---A------CGCTAT-GTTCATAATTTCAGCTTCCCACACCATCAGTGGTCCCAATTATTCCGCCCAAAACGT------------------AGGTG-----------------------------CC
dm3	chr2R:9294836-9294994 +		CGATGAGGCGGGCAACACGTTTGTTAACCGAAAGAACG---CTGGTGGACCAGGTAAGT-----------------TT-----AAG-------TCTC----TATACAGATT-----------------CTCGAAG-----ATCCTA---A------TGCTAT-ATTCATAATTTCAGCTTCCCACACCATCAGTGGTCCCAATTTTTCCGCCAAAAATTT------------------AGGGC-----------------------------CC
droEre2	scaffold_4845:16517933-16518091 -		GGATGATTCGGGCAACACGTTTGTACACCGAAAGAATG---CTGGTGGACCAGGTACGT-----------------TT-----AAG-------GTTT----TATACACATT-----------------ATCCGAG-----ATCCCA---A------TATTAT-GTGCCTCCTTTTAGCTTCCCACACCATCAGTGGCCCCAGTTTTTCCGCCCAAAACGT------------------AGGTC-----------------------------CC
droYak3	2R:7660949-7661107 -		CGATGACTTGGGCAACACGTTTGTAAACCGAAAGAACG---CTGGTGGACCAGGTACGC-----------------TT-----AAG-------GTTT----CATACAGATT-----------------TTCCGGG-----GTCCTA---A------TGCTAT-TTGCATTATTTTAGCTTCTCACACCGTCAGTGGTCCCAGTTTTTCCGCCCAGAACTT------------------AGGTC-----------------------------CC
droEug1	scf7180000409663:1105201-1105363 +		CGATGAACTGGGAAACACTTTTGTAAACCGCAAGAACG---CTGGTGGTCCAGGTAAAT-----------------TT-----CAG-------GATT----TATATTAAACCTGCGAAGAGTTTTTA-A----------------A---A------CGAAAT-ATTT-ATATTTTAGCTTCCCACACGGTCAGTGGTCCTAGCTTTTCAGCCCAGAACTT------------------GGGTC-----------------------------CC
droBia1	scf7180000302291:877146-877311 -		CGACGAGCTCGGGAACACATTCGTAAACCGCAAGAACG---CTGGTGGTCCAGGTAAAG-----------------AG-----AGA-------T-CT----TGTACAGTAG-----------------CCAAA-GGAAATGTTCTT---ATAAC--CGACAA-ACATTCGACCCTAGCCTCCCACACAATCAGTGGTCCCAGTCTCTCAGCCCAGAACGT------------------GGGTC-----------------------------CC
droTak1	scf7180000415379:467834-468022 +		CGATGAGCTGGGCAACACATTTGTGAACCGCAAGAATG---CGGGTGGCCAAGGTAGAG-----------------TC-----AAG-------GATT----TATACAGAAT-----------TTTTATA--AA-CGAAAGATTCTA---ATCAC--TGAACT-ATTTAAAATTATAGCTTCCCACTCGATAAGTGGTCCCAGTCTCTCCGCCCAAAACCC------------------GAATCCCGCCAGTCAGCAG-----------GGTTCC
droEle1	scf7180000491282:528446-528614 +		CGATGAGCTGGGAAACACTTTTGTGAACCGAAAGAATC---CAGGTGGCCCAGGTACAG-----------------TG-----GAT-------GATT----TAAATAGGCC-----------------CTCAAAGCTTATATTCTA---TTAATTTGAATA--TTTTTTTATTTTAGCTTCCCATTCCATTAGTGGTCCGAGCCTTTCGGCACAGAACTT------------------GGGAA-----------------------------GC
droRho1	scf7180000778024:13750-13917 -		CGATGACCTGGGAAACACTTTTGTGAACCGAAAGAACG---CCGGTGGTCCAGGTACAG-----------------TA-----AAG-------GACT----TAAACAAGAC-----------------CTGGACGATTATATTTAA---TTTAA--TAACAT-TTGTACAATTTTAGCTTCCCACACCGTCAGTGGTCCGAGCTTTTCCGCCCAGAACTT------------------GGGTC-----------------------------CC
droFic1	scf7180000454039:107159-107327 +		CGATGAGCAGGGAAACACTTATGTGAACCGAAAGG---------GCCGTCCAGGTATATAATATATATACATAGGTAT-----ATA-------AATA----TATACAGATG-----------------CA----G-----ATTGTACTAA------ATTTATGAATTATTCTTTTAGGATCCCACACGATTAGTGGACCAGGTCTTACAGCCCAGAACTT------------------GGGTC------------------------------C
droKik1	scf7180000302277:538550-538710 -		CGATGAGCAGGGCAACACCTTTGTGCACCGCAAGAATC---CAGGAGGTCCAGGTAAAG-----------------TC-----GAG-------TTTGAGTTAATACTTTTT-----------------AATCAAA-----TAATAA---A------AGTT---ATTTATATCTTCAGCTACTCATACGATAAGTGGCCCCACCTTGTCGGCCCAGAATTT------------------GGGCC-----------------------------CC
droAna3	scaffold_13266:16602369-16602524 +		CGATGAGAGCGGGAACACCTTTGTAAACCGCAAGAATC---CTGGTGAGAATCGCAAAA-----------------CT-----TTTCAAAGGGTTTA-----AGTTTT--------------------AACTAAA----------A---A------TATTAT--ATTCCCATTCCAGCCTCTCACACTATTAGCGGCCCCCGATTTACGGCCCAAAACTT------------------GGGTC-----------------------------CC
droBip1	scf7180000396384:712944-713115 +		CGATGAACGAGGCAACACCTATGTGAACCGCAAGAAAC---CCGGTAAGAA-----TCT-----------------TAAATCTTTTCAGTGGGTTT-------------------------------------GG-----GTTTCA---ATAAA--AAATGG-CTTCCCCATTCCAGCCTCTCACACTATTAGCGGCCCTGGCTTGACGGCTCAAAACTT------------------GGTTCCCGTCCGCCCGGAC-----------GGTCCC
dp5	3:13573250-13573405 -		GGATGAAGGTGGCAACACTTATGTGAACCGAAAAAATG---CCGGAGGACCAGGTACAG-----------------TC-----AAG-------C-------CATACGAGTT-----------------TTATAAG-----AATTCC---A------CTATAT-GAGTATATCTGTAGGAACGCACACCATCAGCGGTCCTAGCTTCTCAGCTACAAATGG------------------ACAGC-----------------------------AT
droPer2	scaffold_2:8046557-8046730 +		GGATGAAGGTGGCAACACTTATGTGAACCGAAAAAATG---CCGGAGGACCAGGTACAG-----------------TC-----AAG-------C-------CATACGAGTT-----------------TTATAAG-----AATTCC---A------CTATAT-GAGTATATCTGTAGGAACGCACACCATCAGCGGTCCTAGCTTCTCAGCTACAAATGGACAGCATAAAATTATTAAGGGAA-----------------------------AC
droWil2	scf2_1100000004382:903594-903776 -		CGACGAACATGGCAATACTTTTGTCCATCGCAAAAATGGAGGCGGAGTACCAGGTAAAT-----------------TG-----AAA-------C--T----CAGACAGAAGCTGACAATTGT------------------TATGAA---CAT----AGAGA--ACTTTCTATTATAGCAACTCATAGTATTAGCGGGCCTGCTGTGACAGCTACCCATGG------------------AC--C---------TGGATTGGATAATAGAAATACT
droVir3	scaffold_12875:1806763-1806916 +		AGACGAGCAGGGCAACACCTATGTGCATAATAAGAATGGCCCCGGCCAACCAGGTAAAT-----------------TC-----CTT-------TATC----AGCCTCAACCTC---------------ATTAATG-----G---------------CTACAA-AGCCGTACCCTTAGCTACCCACAGCATAAGTGGACCGAGTTTAGTGGCCCAGCGC----------------------GGA-----------------------------CC
droMoj3	scaffold_6496:13684190-13684336 -		AGATGAGGACGGCAATACGTATGTGCATAACAGGAATAGAGCAGGCAAACCAGGTGAAT-----------------AG-----CAA-------T--C-----AGCTGTCAT-----------------TCATCAC-----ATTGTG---C------TTACAC-ACCTCGTTTTACAGACACACACAGCATATCTGGCCCGAATCTGGTG------------------------------GCTC-----------------------------GC
droGri2	scaffold_15112:3903894-3903949 +		GGATGAGGGGGACAACACCTATGTGAATCAGAAGGGTG---CAGGCAGACCAGGTAAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

CGATGAGGCGGGCAACACGTTTGTTAACCGAAAGAACG---CTGGTGGACCAGGTAAGC-----------------TT-----AAG-------TCTC----TATACAGATT-----------------CTCCAAG-----ATTCTA---A------CGCTAT-GTTCATAATTTCAGCTTCCCACACCATCAGTGGCCCCAGTTATTCCGCCCAAAACGT------------------AGGTT-----------------------------CC	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.....................TGTTAACCGAAAGAACG---CTGGTGG..................................................................................................................................................................................................................................	24	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CGAAAGAACG---CTGGTGGACCA..............................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0

droSec2

CGATGAGGCGGGCAACACGTTTGTTAACCGAAAGAACG---TTGGTGGACCAGGTAAGT-----------------TT-----AGG-------TCTC----TATACGGATT-----------------CTCCAAG-----ATTCTA---A------CGCTAT-GTTCATAATTTCAGCTTCCCACACCATCAGTGGTCCCAATTATTCCGCCCAAAACGT------------------AGGTG-----------------------------CC	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
..................GTTTGTTAACCGAAAGAACG---T........................................................................................................................................................................................................................................	21	1	2.00	2	2	0	0	0
..............ACACGTTTGTTAACCGAAAGA...............................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1
.GATGAGGCGGGCAACACGT..............................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0
...................TTTGTTAACCGAAAGAACG---TTGGTGGA.................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0
............................CGAAAGAACG---TTGGTGGACC...............................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0
.......................................................................................................................................................................................................CAATTATTCCGCCCAAAACGT------------------A...................................	22	1	1.00	1	0	0	0	1
.........................AACCGAAAGAACG---TTGGTGGAC................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0

dm3

CGATGAGGCGGGCAACACGTTTGTTAACCGAAAGAACG---CTGGTGGACCAGGTAAGT-----------------TT-----AAG-------TCTC----TATACAGATT-----------------CTCGAAG-----ATCCTA---A------TGCTAT-ATTCATAATTTCAGCTTCCCACACCATCAGTGGTCCCAATTTTTCCGCCAAAAATTT------------------AGGGC-----------------------------CC	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.....................TGTTAACCGAAAGAACG---CTGGT....................................................................................................................................................................................................................................	22	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................CGAAAGAACG---CTGGTGGA.................................................................................................................................................................................................................................	18	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................AAAGAACG---CTGGTGGACC...............................................................................................................................................................................................................................	18	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................GAAAGAACG---CTGGTGGAC................................................................................................................................................................................................................................	18	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..ATGAGGCGGGCAACACGTTTG...........................................................................................................................................................................................................................................................	21	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................GAAAGAACG---CTGGTGGACCA..............................................................................................................................................................................................................................	20	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.................CGTTTGTTAACCGAAAGAAC.............................................................................................................................................................................................................................................	20	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................CCGAAAGAACG---CTGGTGGAC................................................................................................................................................................................................................................	20	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
..............ACACGTTTGTTAACCGAAAG................................................................................................................................................................................................................................................	20	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................ACGTTTGTTAACCGAAAGAACG---CTGGT....................................................................................................................................................................................................................................	27	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................ACCGAAAGAACG---CTGGTGG..................................................................................................................................................................................................................................	19	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................AATTTTTCCGCCAAAAATTT------------------....................................	20	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................AACCGAAAGAACG---CTGGT....................................................................................................................................................................................................................................	18	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................GTTAACCGAAAGAACG---CTGGTGGA.................................................................................................................................................................................................................................	24	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

GGATGATTCGGGCAACACGTTTGTACACCGAAAGAATG---CTGGTGGACCAGGTACGT-----------------TT-----AAG-------GTTT----TATACACATT-----------------ATCCGAG-----ATCCCA---A------TATTAT-GTGCCTCCTTTTAGCTTCCCACACCATCAGTGGCCCCAGTTTTTCCGCCCAAAACGT------------------AGGTC-----------------------------CC	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.....................................................GTACGT-----------------TT-----AAG-------GTTT----TATACACATT-----------------ATCC..............................................................................................................................................	29	1	1.00	1	0	0	0	0	1	0	0
..........................ACCGAAAGAATG---CTGGTGGACCAG.............................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1	0
............................CGAAAGAATG---CTGGTGGACCAG.............................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1	0
GGATGATTCGGGCAACACGTTTGTA.........................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0	0
.............................................TGGACCAGGTACGT-----------------TT-----AAG-------G....................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0
.................CGTTTGTACACCGAAAGAATG---CT.......................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0

droYak3

CGATGACTTGGGCAACACGTTTGTAAACCGAAAGAACG---CTGGTGGACCAGGTACGC-----------------TT-----AAG-------GTTT----CATACAGATT-----------------TTCCGGG-----GTCCTA---A------TGCTAT-TTGCATTATTTTAGCTTCTCACACCGTCAGTGGTCCCAGTTTTTCCGCCCAGAACTT------------------AGGTC-----------------------------CC	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
..............ACACGTTTGTAAACCGAAAGAACG---CT.......................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................TGTAAACCGAAAGAACG---CT.......................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
CGATGACTTGGGCAACACGT..............................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............CAACACGTTTGTAAACCGAAAGAACG---CT.......................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

CGATGAACTGGGAAACACTTTTGTAAACCGCAAGAACG---CTGGTGGTCCAGGTAAAT-----------------TT-----CAG-------GATT----TATATTAAACCTGCGAAGAGTTTTTA-A----------------A---A------CGAAAT-ATTT-ATATTTTAGCTTCCCACACGGTCAGTGGTCCTAGCTTTTCAGCCCAGAACTT------------------GGGTC-----------------------------CC	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CGACGAGCTCGGGAACACATTCGTAAACCGCAAGAACG---CTGGTGGTCCAGGTAAAG-----------------AG-----AGA-------T-CT----TGTACAGTAG-----------------CCAAA-GGAAATGTTCTT---ATAAC--CGACAA-ACATTCGACCCTAGCCTCCCACACAATCAGTGGTCCCAGTCTCTCAGCCCAGAACGT------------------GGGTC-----------------------------CC	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CGATGAGCTGGGCAACACATTTGTGAACCGCAAGAATG---CGGGTGGCCAAGGTAGAG-----------------TC-----AAG-------GATT----TATACAGAAT-----------TTTTATA--AA-CGAAAGATTCTA---ATCAC--TGAACT-ATTTAAAATTATAGCTTCCCACTCGATAAGTGGTCCCAGTCTCTCCGCCCAAAACCC------------------GAATCCCGCCAGTCAGCAG-----------GGTTCC	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CGATGAGCTGGGAAACACTTTTGTGAACCGAAAGAATC---CAGGTGGCCCAGGTACAG-----------------TG-----GAT-------GATT----TAAATAGGCC-----------------CTCAAAGCTTATATTCTA---TTAATTTGAATA--TTTTTTTATTTTAGCTTCCCATTCCATTAGTGGTCCGAGCCTTTCGGCACAGAACTT------------------GGGAA-----------------------------GC	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CGATGACCTGGGAAACACTTTTGTGAACCGAAAGAACG---CCGGTGGTCCAGGTACAG-----------------TA-----AAG-------GACT----TAAACAAGAC-----------------CTGGACGATTATATTTAA---TTTAA--TAACAT-TTGTACAATTTTAGCTTCCCACACCGTCAGTGGTCCGAGCTTTTCCGCCCAGAACTT------------------GGGTC-----------------------------CC	Size	Hit Count	Total Norm	Total
No Reads

droFic1

CGATGAGCAGGGAAACACTTATGTGAACCGAAAGG---------GCCGTCCAGGTATATAATATATATACATAGGTAT-----ATA-------AATA----TATACAGATG-----------------CA----G-----ATTGTACTAA------ATTTATGAATTATTCTTTTAGGATCCCACACGATTAGTGGACCAGGTCTTACAGCCCAGAACTT------------------GGGTC------------------------------C	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CGATGAGCAGGGCAACACCTTTGTGCACCGCAAGAATC---CAGGAGGTCCAGGTAAAG-----------------TC-----GAG-------TTTGAGTTAATACTTTTT-----------------AATCAAA-----TAATAA---A------AGTT---ATTTATATCTTCAGCTACTCATACGATAAGTGGCCCCACCTTGTCGGCCCAGAATTT------------------GGGCC-----------------------------CC	Size	Hit Count	Total Norm	Total
No Reads

droAna3

CGATGAGAGCGGGAACACCTTTGTAAACCGCAAGAATC---CTGGTGAGAATCGCAAAA-----------------CT-----TTTCAAAGGGTTTA-----AGTTTT--------------------AACTAAA----------A---A------TATTAT--ATTCCCATTCCAGCCTCTCACACTATTAGCGGCCCCCGATTTACGGCCCAAAACTT------------------GGGTC-----------------------------CC	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
..............................................................................................................................................................................................TAGCGGCCCCCGATTTACGGC...............................................................	21	1	2.00	2	0	0	0	0	0	2
...............................................................................................................................................................................AGCCTCTCACACTATTAGCGG..............................................................................	21	1	1.00	1	0	0	0	0	0	1
............................................................................................................................................................................................ATTAGCGGCCCCCGATTTACGGC...............................................................	23	1	1.00	1	0	0	0	0	0	1
.............................................................................T-----TTTCAAAGGGTTTA-----AGTTTT--------------------..................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................CTCTCACACTATTAGCGGCCC...........................................................................	21	1	1.00	1	1	0	0	0	0	0
....GAGAGCGGGAACACCTTTGT..........................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
........................AAACCGCAAGAATC---CTGCCT...................................................................................................................................................................................................................................	20	18	0.06	1	0	0	0	1	0	0

droBip1

CGATGAACGAGGCAACACCTATGTGAACCGCAAGAAAC---CCGGTAAGAA-----TCT-----------------TAAATCTTTTCAGTGGGTTT-------------------------------------GG-----GTTTCA---ATAAA--AAATGG-CTTCCCCATTCCAGCCTCTCACACTATTAGCGGCCCTGGCTTGACGGCTCAAAACTT------------------GGTTCCCGTCCGCCCGGAC-----------GGTCCC	Size	Hit Count	Total Norm	Total
No Reads

dp5

GGATGAAGGTGGCAACACTTATGTGAACCGAAAAAATG---CCGGAGGACCAGGTACAG-----------------TC-----AAG-------C-------CATACGAGTT-----------------TTATAAG-----AATTCC---A------CTATAT-GAGTATATCTGTAGGAACGCACACCATCAGCGGTCCTAGCTTCTCAGCTACAAATGG------------------ACAGC-----------------------------AT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..............................................................................................................................................................................................CAGCGGTCCTAGCTTCTCAGCTAC............................................................	24	1	4.00	4	0	0	0	0	0	4	0	0	0	0
....................................................................................................................................................................................CGCACACCATCAGCGGTCCTA.........................................................................	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0
....................ATGTGAACCGAAAAAATG---C........................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............CACTTATGTGAACCGAAAA................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................AGCTTCTCAGCTACAAATGG------------------AC..................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0
...............................AAAAATG---CCGGAGGACCAG.............................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....GAAGGTGGCAACACTTATGTGAACCG....................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................ACTTATGTGAACCGAAAAAATG---CCG......................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................ATCAGCGGTCCTAGCTTCTCAGCTAC............................................................	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0
...........................................................................................................................................................................................CATCAGCGGTCCTAGCTTCTCAGCTAC............................................................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0
..............................AAAAAATG---CCGGAGGACC...............................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................AGTATATCTGTAGGAACGCA..........................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......GGTGGCAACACTTATGTGAA.......................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................TTATGTGAACCGAAAAAATG---C........................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................ACGCACACCATCAGCGGTCCT..........................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....AAGGTGGCAACACTTATGTGAACCGAAA.................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0
.........................................................................................................................................................................................................GCTTCTCAGCTACAAATGG------------------ACA.................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................ACGCACACCATCAGCGGTC............................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................AGCGGTCCTAGCTTCTCAGCC..............................................................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0
..............................................................................................................................................................................................CAGCGGTCCTAGCTTCTCAGCC..............................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0
............................................................................................................................................................................................................TCTCAGCTACAAATGG------------------ACA.................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................AACGCACACCATCAGCGGTCC...........................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

GGATGAAGGTGGCAACACTTATGTGAACCGAAAAAATG---CCGGAGGACCAGGTACAG-----------------TC-----AAG-------C-------CATACGAGTT-----------------TTATAAG-----AATTCC---A------CTATAT-GAGTATATCTGTAGGAACGCACACCATCAGCGGTCCTAGCTTCTCAGCTACAAATGGACAGCATAAAATTATTAAGGGAA-----------------------------AC	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
......................................................................................................................................................................................CACACCATCAGCGGTCCTAGCTTCTCAG................................................................	28	1	2.00	2	2	0	0	0	0	0
............................................................................................................................................................................................ATCAGCGGTCCTAGCTTCTCAGCT..............................................................	24	1	2.00	2	0	0	0	0	2	0
..............................AAAAAATG---CCGGAGGACCAG.............................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0
.............................................................................................................................................................................................TCAGCGGTCCTAGCTTCTCAGCTAC............................................................	25	1	1.00	1	0	0	0	1	0	0
..............................................................................................................................................................................................................TCAGCTACAAATGGACAGCATA..............................................	22	1	1.00	1	0	0	0	1	0	0
.................................................................................................................................................................................................................GCTACAAATGGACAGCATAAAATT.........................................	24	1	1.00	1	0	0	0	0	1	0
.................................................................................................................................................................................................................GCTACAAATGGACAGCATAAA............................................	21	1	1.00	1	0	0	0	0	1	0
..............................................................................................................................................................................................CAGCGGTCCTAGCTTCTCAGCT..............................................................	22	1	1.00	1	0	0	0	0	1	0
............................................................................................................................................................................................ATCAGCGGTCCTAGCTTCTCAGC...............................................................	23	1	1.00	1	0	0	0	0	1	0
...................................................................................................................................................................................ACGCACACCATCAGCGGTCC...........................................................................	20	1	1.00	1	0	0	0	0	1	0
..............................................................................................................................................................................................CAGCGGTCCTAGCTTCTCAGCTAC............................................................	24	1	1.00	1	0	0	0	0	1	0
.......................................................................................................................................................................................................................AATGGACAGCATAAAATT.........................................	18	1	1.00	1	0	0	0	0	1	0
.................................................................................................................................................................................................................GCTACAAATGGACAGCAT...............................................	18	1	1.00	1	0	0	0	0	1	0
...............................................................................................................................................................................................AGCGGTCCTAGCTTCTCAGCTAC............................................................	23	1	1.00	1	0	0	0	0	1	0
.............................GAAAAAATG---CCGGAGGACCAG.............................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................ATCAGCGGTCCTAGCTTC....................................................................	18	1	1.00	1	0	0	0	0	1	0
............................................................................................................................................................................................ATCAGCGGTCCTAGCTTCTCAGCTAC............................................................	26	1	1.00	1	0	0	0	0	1	0

droWil2

CGACGAACATGGCAATACTTTTGTCCATCGCAAAAATGGAGGCGGAGTACCAGGTAAAT-----------------TG-----AAA-------C--T----CAGACAGAAGCTGACAATTGT------------------TATGAA---CAT----AGAGA--ACTTTCTATTATAGCAACTCATAGTATTAGCGGGCCTGCTGTGACAGCTACCCATGG------------------AC--C---------TGGATTGGATAATAGAAATACT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
..............................................................................................................................................................................................TAGCGGGCCTGCTGTGACAGCT..............................................................	22	1	2.00	2	2	0	0	0	0
..................................................................................................................................................................................................................................................C---------TGGATTGGATAATAGAAATAC.	22	1	1.00	1	0	0	0	0	1
....................................................................................................................................................................................................GCCTGCTGTGACAGCTACC...........................................................	19	1	1.00	1	0	1	0	0	0
.................................AAATGGAGGCGGAGTACC...............................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1
..................................................................................................................................................................................................................CTACCCATGG------------------AC--C---------TGGATTGGATAAT.........	26	1	1.00	1	0	1	0	0	0
...............................................................................................................................................................................................AGCGGGCCTGCTGTGACAGC...............................................................	20	1	1.00	1	0	1	0	0	0
.............................................................................................................................................................................................TTAGCGGGCCTGCTGTGACAG................................................................	21	1	1.00	1	0	1	0	0	0
...................................................................................................................................................................................ACTCATAGTATTAGCGGGCC...........................................................................	20	1	1.00	1	1	0	0	0	0
.......................................................................................................................................................................................................................CATGG------------------AC--C---------TGGATTGGAT............	18	1	1.00	1	0	0	0	0	1
.GACGAACATGGCAATACTTTTGTC.........................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0
................ACTTTTGTCCATCGCAAAAATGGA..........................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0
.....................................................................................................................................................................................................................CCCATGG------------------AC--C---------TGGATTGGAT............	20	1	1.00	1	0	0	0	0	1
................................................................................................................................................................................................................AGCTACCCATGG------------------AC--C---------TGGATTGG..............	23	1	1.00	1	0	1	0	0	0
............................................................................................................................................................................................ATTAGCGGGCCTGCTGTGACAGC...............................................................	23	1	1.00	1	1	0	0	0	0
...................................ATGGAGGCGGAGTACCAGC............................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1
.......................................................................................................................................................................................................................CATGG------------------AC--C---------TGGATTGGATAATAGAAAT...	27	1	1.00	1	1	0	0	0	0
........................................................................................................................................................................................................................ATGG------------------AC--C---------TGGATTGGATAATAG.......	22	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................G------------------AC--C---------TGGATTGGATAATAG.......	19	1	1.00	1	0	0	1	0	0
..................................AATGGAGGCGGAGTACCAGCA...........................................................................................................................................................................................................................	21	2	0.50	1	0	0	0	0	1

droVir3

AGACGAGCAGGGCAACACCTATGTGCATAATAAGAATGGCCCCGGCCAACCAGGTAAAT-----------------TC-----CTT-------TATC----AGCCTCAACCTC---------------ATTAATG-----G---------------CTACAA-AGCCGTACCCTTAGCTACCCACAGCATAAGTGGACCGAGTTTAGTGGCCCAGCGC----------------------GGA-----------------------------CC	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
...CGAGCAGGGCAACACCTATG...........................................................................................................................................................................................................................................................	20	2	2.00	4	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0
...............................................................................................................................................................................AGCTACCCACAGCATAAGTGGACC...........................................................................	24	2	2.00	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....GAGCAGGGCAACACCTATGTGCAT......................................................................................................................................................................................................................................................	24	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................ATAAGAATGGCCCCGGCCAACC...............................................................................................................................................................................................................................	22	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..ACGAGCAGGGCAACACCTATGTG.........................................................................................................................................................................................................................................................	23	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....GAGCAGGGCAACACCTATGTGC........................................................................................................................................................................................................................................................	22	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..ACGAGCAGGGCAACACCTA.............................................................................................................................................................................................................................................................	19	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...CGAGCAGGGCAACACCTATGTGC........................................................................................................................................................................................................................................................	23	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.........................................................................................................................................................................................................GTTTAGTGGCCCAGCGC----------------------G.................................	18	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
................................................................................................................................................................................................GTGGACCGAGTTTAGTGGCCCAGCGC----------------------..................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................GCTACCCACAGCATAAGTGGACCG..........................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................CTACAA-AGCCGTACCCTTAGC................................................................................................	21	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......GCAGGGCAACACCTATGTGCATAATAA.................................................................................................................................................................................................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................GTTTAGTGGCCCAGCGC----------------------GGA-----------------------------A.	21	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......GCAGGGCAACACCTATGTGCA.......................................................................................................................................................................................................................................................	21	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...CGAGCAGGGCAACACCTATGTGCA.......................................................................................................................................................................................................................................................	24	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.........................................................................................................................................................................................................GTTTAGTGGCCCAGCGC----------------------GGA-----------------------------CC	22	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.........................................................................................................................................................................................................GTTTAGTGGCCCAGCGC----------------------GGA-----------------------------C.	21	2	0.50	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................TAAGTGGACCGAGTTTAGT..................................................................	19	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................ATAAGTGGACCGAGTTTAGTGGC...............................................................	23	2	0.50	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

AGATGAGGACGGCAATACGTATGTGCATAACAGGAATAGAGCAGGCAAACCAGGTGAAT-----------------AG-----CAA-------T--C-----AGCTGTCAT-----------------TCATCAC-----ATTGTG---C------TTACAC-ACCTCGTTTTACAGACACACACAGCATATCTGGCCCGAATCTGGTG------------------------------GCTC-----------------------------GC	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.............................................................................................................................................................TACAC-ACCTCGTTTTACAG.................................................................................................	19	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................ATCTGGCCCGAATCTGGTG------------------------------GCT................................	22	1	1.00	1	0	0	0	1	0	0
..ATGAGGACGGCAATACGTATGTGCA.......................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0	0
.......................TGCATAACAGGAATAGAGC........................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
.............AATACGTATGTGCATAACAGGAATAGAG.........................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	1	0	0

droGri2

GGATGAGGGGGACAACACCTATGTGAATCAGAAGGGTG---CAGGCAGACCAGGTAAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
..............................GAAGGGTG---CAGGCAGACCA..............................................................................................................................................................................................................................	19	1	18.00	18	18	0
..............................GAAGGGTG---CAGGCAGACCAGGTG..........................................................................................................................................................................................................................	23	1	15.00	15	11	4
...................TATGTGAATCAGAAGGGTG---CA.......................................................................................................................................................................................................................................	21	1	14.00	14	1	13
..................CTATGTGAATCAGAAGGGT.............................................................................................................................................................................................................................................	19	1	13.00	13	2	11
....................ATGTGAATCAGAAGGGTG---CA.......................................................................................................................................................................................................................................	20	1	12.00	12	4	8
..............................GAAGGGTG---CAGGCAGACC...............................................................................................................................................................................................................................	18	1	12.00	12	12	0
....................ATGTGAATCAGAAGGGTG---CAGGCAGA.................................................................................................................................................................................................................................	26	1	10.00	10	2	8
.............................AGAAGGGTG---CAGGCAGACCAGGTG..........................................................................................................................................................................................................................	24	1	10.00	10	5	5
...................TATGTGAATCAGAAGGGTG---CAG......................................................................................................................................................................................................................................	22	1	9.00	9	2	7
..................CTATGTGAATCAGAAGGGTG---CA.......................................................................................................................................................................................................................................	22	1	8.00	8	3	5
.................CCTATGTGAATCAGAAGGGTG---CA.......................................................................................................................................................................................................................................	23	1	7.00	7	3	4
..............................GAAGGGTG---CAGGCAGACCAGGTGGA........................................................................................................................................................................................................................	25	1	7.00	7	7	0
...........................TCAGAAGGGTG---CAGGCAGA.................................................................................................................................................................................................................................	19	1	7.00	7	5	2
.............................AGAAGGGTG---CAGGCAGACC...............................................................................................................................................................................................................................	19	1	6.00	6	4	2
.................CCTATGTGAATCAGAAGGGT.............................................................................................................................................................................................................................................	20	1	6.00	6	2	4
.............................AGAAGGGTG---CAGGCAGACCA..............................................................................................................................................................................................................................	20	1	6.00	6	4	2
......................GTGAATCAGAAGGGTG---CAGGCAGA.................................................................................................................................................................................................................................	24	1	6.00	6	4	2
.............AACACCTATGTGAATCAGAAGGGT.............................................................................................................................................................................................................................................	24	1	5.00	5	0	5
..............................GAAGGGTG---CAGGCAGACCAGGT...........................................................................................................................................................................................................................	22	1	5.00	5	5	0
............CAACACCTATGTGAATCAGAAGGGT.............................................................................................................................................................................................................................................	25	1	5.00	5	1	4
...............................AAGGGTG---CAGGCAGACCAGGTG..........................................................................................................................................................................................................................	22	1	5.00	5	5	0
..............ACACCTATGTGAATCAGAAGGGT.............................................................................................................................................................................................................................................	23	1	4.00	4	1	3
..................CTATGTGAATCAGAAGGGTG---CAG......................................................................................................................................................................................................................................	23	1	4.00	4	0	4
.........................AATCAGAAGGGTG---CAGGCAGA.................................................................................................................................................................................................................................	21	1	4.00	4	1	3
...............................AAGGGTG---CAGGCAGACCAGGTGGA........................................................................................................................................................................................................................	24	1	4.00	4	4	0
..............................GAAGGGTG---CAGGCAGACCAGCA...........................................................................................................................................................................................................................	22	1	4.00	4	4	0
....................ATGTGAATCAGAAGGGTG---CAG......................................................................................................................................................................................................................................	21	1	4.00	4	0	4
..............................GAAGGGTG---CAGGCAGACCAGGTGG.........................................................................................................................................................................................................................	24	1	4.00	4	4	0
...............................AAGGGTG---CAGGCAGACCA..............................................................................................................................................................................................................................	18	1	4.00	4	4	0
............................CAGAAGGGTG---CAGGCAGACC...............................................................................................................................................................................................................................	20	1	3.00	3	1	2
.............................AGAAGGGTG---CAGGCAGAC................................................................................................................................................................................................................................	18	1	3.00	3	2	1
...................TATGTGAATCAGAAGGGTG---CAGGCA...................................................................................................................................................................................................................................	25	1	3.00	3	0	3
............................CAGAAGGGTG---CAGGCAGA.................................................................................................................................................................................................................................	18	1	3.00	3	2	1
.........................AATCAGAAGGGTG---CAGGCAGACCAG.............................................................................................................................................................................................................................	25	1	3.00	3	0	3
....................ATGTGAATCAGAAGGGTG---CAGGCA...................................................................................................................................................................................................................................	24	1	3.00	3	2	1
.....................TGTGAATCAGAAGGGTG---CA.......................................................................................................................................................................................................................................	19	1	3.00	3	2	1
..........GACAACACCTATGTGAATCAGAAGGGT.............................................................................................................................................................................................................................................	27	1	3.00	3	1	2
.............................AGAAGGGTG---CAGGCAGACCAG.............................................................................................................................................................................................................................	21	1	3.00	3	0	3
...........................TCAGAAGGGTG---CAGGCAGACC...............................................................................................................................................................................................................................	21	1	3.00	3	1	2
.........................AATCAGAAGGGTG---CAGGCAGACCA..............................................................................................................................................................................................................................	24	1	2.00	2	0	2
..................CTATGTGAATCAGAAGGGTG---CAGG.....................................................................................................................................................................................................................................	24	1	2.00	2	1	1
..............................GAAGGGTG---CAGGCAGACCAG.............................................................................................................................................................................................................................	20	1	2.00	2	2	0
.................CCTATGTGAATCAGAAGGG..............................................................................................................................................................................................................................................	19	1	2.00	2	0	2
...................TATGTGAATCAGAAGGGT.............................................................................................................................................................................................................................................	18	1	2.00	2	0	2
..........................ATCAGAAGGGTG---CAGGCAGAC................................................................................................................................................................................................................................	21	1	2.00	2	0	2
..........................ATCAGAAGGGTG---CAGGCAGA.................................................................................................................................................................................................................................	20	1	2.00	2	0	2
......................GTGAATCAGAAGGGTG---CAG......................................................................................................................................................................................................................................	19	1	2.00	2	2	0
..................CTATGTGAATCAGAAGGGTG---CAGGCA...................................................................................................................................................................................................................................	26	1	2.00	2	1	1
............CAACACCTATGTGAATCAGAAGG...............................................................................................................................................................................................................................................	23	1	2.00	2	1	1
.............................AGAAGGGTG---CAGGCAGACCAGGTGGA........................................................................................................................................................................................................................	26	1	2.00	2	1	1
...........................TCAGAAGGGTG---CAGGCAGACCAGGTG..........................................................................................................................................................................................................................	26	1	2.00	2	0	2
.........................AATCAGAAGGGTG---CAGGCA...................................................................................................................................................................................................................................	19	1	2.00	2	0	2
..........................ATCAGAAGGGTG---CAGGCAGACCA..............................................................................................................................................................................................................................	23	1	2.00	2	2	0
....................ATGTGAATCAGAAGGGTG---CAGG.....................................................................................................................................................................................................................................	22	1	2.00	2	0	2
...........................TCAGAAGGGTG---CAGGCAGAC................................................................................................................................................................................................................................	20	1	2.00	2	0	2
...........ACAACACCTATGTGAATCAGAAGGGT.............................................................................................................................................................................................................................................	26	1	2.00	2	1	1
.............AACACCTATGTGAATCAGAAGG...............................................................................................................................................................................................................................................	22	1	2.00	2	0	2
............................CAGAAGGGTG---CAGGCAGACCAG.............................................................................................................................................................................................................................	22	1	2.00	2	1	1
GGATGAGGGGGACAACACC...............................................................................................................................................................................................................................................................	19	2	2.00	4	4	0
..........................ATCAGAAGGGTG---CAGGCA...................................................................................................................................................................................................................................	18	1	2.00	2	2	0
.............................AGAAGGGTG---CAGGCAGACCAGGTGG.........................................................................................................................................................................................................................	25	1	2.00	2	0	2
..ATGAGGGGGACAACACCTATG...........................................................................................................................................................................................................................................................	21	2	1.00	2	1	1
........GGGACAACACCTATGTGAATCAGAAG................................................................................................................................................................................................................................................	26	1	1.00	1	1	0
....................ATGTGAATCAGAAGGGTG---CAGGCAGAC................................................................................................................................................................................................................................	27	1	1.00	1	0	1
....................ATGTGAATCAGAAGGGTG---CAGGCAGACC...............................................................................................................................................................................................................................	28	1	1.00	1	0	1
...............................AAGGGTG---CAGGCAGACCAGG............................................................................................................................................................................................................................	20	1	1.00	1	1	0
.......................TGAATCAGAAGGGTG---CAGGCAGACC...............................................................................................................................................................................................................................	25	1	1.00	1	1	0
.........................AATCAGAAGGGTG---CAGGCAGACC...............................................................................................................................................................................................................................	23	1	1.00	1	1	0
............................CAGAAGGGTG---CAGGCAGACCAGG............................................................................................................................................................................................................................	23	1	1.00	1	0	1
............................CAGAAGGGTG---CAGGCAGACCAGGTG..........................................................................................................................................................................................................................	25	1	1.00	1	1	0
.....................TGTGAATCAGAAGGGTG---CAGGCA...................................................................................................................................................................................................................................	23	1	1.00	1	0	1
................................AGGGTG---CAGGCAGACCAGGTGG.........................................................................................................................................................................................................................	22	1	1.00	1	1	0
...............................AAGGGTG---CAGGCAGACCAGCA...........................................................................................................................................................................................................................	21	1	1.00	1	1	0
...............................AAGGGTG---CAGGCAGACCAGGTGG.........................................................................................................................................................................................................................	23	1	1.00	1	1	0
................ACCTATGTGAATCAGAAGGGTG---CA.......................................................................................................................................................................................................................................	24	1	1.00	1	0	1
..........GACAACACCTATGTGAATCAGAAG................................................................................................................................................................................................................................................	24	1	1.00	1	1	0
..........................ATCAGAAGGGTG---CAGGCAGACCAGCA...........................................................................................................................................................................................................................	26	1	1.00	1	1	0
.............AACACCTATGTGAATCAGAAGGG..............................................................................................................................................................................................................................................	23	1	1.00	1	0	1
................................AGGGTG---CAGGCAGACCAGCA...........................................................................................................................................................................................................................	20	1	1.00	1	1	0
..................CTATGTGAATCAGAAGGGTG---CAGGCAGA.................................................................................................................................................................................................................................	28	1	1.00	1	0	1
...................TATGTGAATCAGAAGGGTG---CAGGC....................................................................................................................................................................................................................................	24	1	1.00	1	0	1
.................CCTATGTGAATCAGAAGGGTG---CAGG.....................................................................................................................................................................................................................................	25	1	1.00	1	1	0
...........................TCAGAAGGGTG---CAGGCAGACCAGCA...........................................................................................................................................................................................................................	25	1	1.00	1	0	1
................ACCTATGTGAATCAGAAGGG..............................................................................................................................................................................................................................................	20	1	1.00	1	0	1
......................GTGAATCAGAAGGGTG---CAGGCAGAC................................................................................................................................................................................................................................	25	1	1.00	1	0	1
.....................TGTGAATCAGAAGGGTG---CAGGCAGA.................................................................................................................................................................................................................................	25	1	1.00	1	1	0
............CAACACCTATGTGAATCAGAAGGG..............................................................................................................................................................................................................................................	24	1	1.00	1	0	1
..........................ATCAGAAGGGTG---CAGGCAGACCAGGTG..........................................................................................................................................................................................................................	27	1	1.00	1	0	1
........................GAATCAGAAGGGTG---CAGGCAGA.................................................................................................................................................................................................................................	22	1	1.00	1	1	0
.................CCTATGTGAATCAGAAGGGTG---C........................................................................................................................................................................................................................................	22	1	1.00	1	0	1
.........................AATCAGAAGGGTG---CAGGCAGAC................................................................................................................................................................................................................................	22	1	1.00	1	1	0
..ATGAGGGGGACAACACCTATGTGA........................................................................................................................................................................................................................................................	24	2	1.00	2	1	1
............................CAGAAGGGTG---CAGGCAGACCAGGTGGA........................................................................................................................................................................................................................	27	1	1.00	1	1	0
............................CAGAAGGGTG---CAGGCAGACCA..............................................................................................................................................................................................................................	21	1	1.00	1	1	0
....................ATGTGAATCAGAAGGGTG---C........................................................................................................................................................................................................................................	19	1	1.00	1	1	0
................ACCTATGTGAATCAGAAGGGTG---CAG......................................................................................................................................................................................................................................	25	1	1.00	1	1	0
............CAACACCTATGTGAATCAGAAG................................................................................................................................................................................................................................................	22	1	1.00	1	1	0
......................GTGAATCAGAAGGGTG---CA.......................................................................................................................................................................................................................................	18	1	1.00	1	0	1
.....................TGTGAATCAGAAGGGTG---CAG......................................................................................................................................................................................................................................	20	1	1.00	1	0	1
......................GTGAATCAGAAGGGTG---CAGGC....................................................................................................................................................................................................................................	21	1	1.00	1	1	0
..............ACACCTATGTGAATCAGAAGG...............................................................................................................................................................................................................................................	21	1	1.00	1	0	1
....................ATGTGAATCAGAAGGGTG---CAGGC....................................................................................................................................................................................................................................	23	1	1.00	1	0	1
..........................ATCAGAAGGGTG---CAGGCAGACCAG.............................................................................................................................................................................................................................	24	1	1.00	1	1	0
...................................GTG---CAGGCAGACCAGGTG..........................................................................................................................................................................................................................	18	1	1.00	1	1	0
.................CCTATGTGAATCAGAAGGGTG---.........................................................................................................................................................................................................................................	21	1	1.00	1	0	1
.......................TGAATCAGAAGGGTG---CAGGCAGACCA..............................................................................................................................................................................................................................	26	1	1.00	1	1	0
.....AGGGGGACAACACCTATG...........................................................................................................................................................................................................................................................	18	2	1.00	2	2	0
.............................AGAAGGGTG---CAGGCAGACCAGG............................................................................................................................................................................................................................	22	1	1.00	1	1	0
...........................TCAGAAGGGTG---CAGGCAGACCAG.............................................................................................................................................................................................................................	23	1	1.00	1	1	0
...........................TCAGAAGGGTG---CAGGCAGACCA..............................................................................................................................................................................................................................	22	1	1.00	1	0	1
....................ATGTGAATCAGAAGGGTG---CAGGCAGACCA..............................................................................................................................................................................................................................	29	1	1.00	1	0	1
................................AGGGTG---CAGGCAGACCAGGTG..........................................................................................................................................................................................................................	21	1	1.00	1	1	0
.............................AGAAGGGTG---CAGGCAGACCAGCA...........................................................................................................................................................................................................................	23	1	1.00	1	0	1
......................GTGAATCAGAAGGGTG---CAGGCAGACCA..............................................................................................................................................................................................................................	27	1	1.00	1	0	1
.GATGAGGGGGACAACACCT..............................................................................................................................................................................................................................................................	19	2	1.00	2	2	0
......................GTGAATCAGAAGGGTG---CAGGCA...................................................................................................................................................................................................................................	22	1	1.00	1	1	0
.........................AATCAGAAGGGTG---CAGGCAGACCAGCA...........................................................................................................................................................................................................................	27	1	1.00	1	1	0
...................TATGTGAATCAGAAGGGTG---CAGG.....................................................................................................................................................................................................................................	23	1	1.00	1	0	1
.......................TGAATCAGAAGGGTG---CAG......................................................................................................................................................................................................................................	18	1	1.00	1	0	1
..........................ATCAGAAGGGTG---CAGGCAGACC...............................................................................................................................................................................................................................	22	1	1.00	1	0	1
....................ATGTGAATCAGAAGGGTG---.........................................................................................................................................................................................................................................	18	1	1.00	1	1	0
.................................GGGTG---CAGGCAGACCAGGTGGA........................................................................................................................................................................................................................	22	3	0.67	2	2	0
..ATGAGGGGGACAACACCTATGTG.........................................................................................................................................................................................................................................................	23	2	0.50	1	1	0
..ATGAGGGGGACAACACCT..............................................................................................................................................................................................................................................................	18	2	0.50	1	1	0
.....AGGGGGACAACACCTATGTGAATCA....................................................................................................................................................................................................................................................	25	2	0.50	1	1	0
..ATGAGGGGGACAACACCTATGTGAAT......................................................................................................................................................................................................................................................	26	2	0.50	1	1	0
....GAGGGGGACAACACCTATGTGAAT......................................................................................................................................................................................................................................................	24	2	0.50	1	1	0
...TGAGGGGGACAACACCTATGTGAATCA....................................................................................................................................................................................................................................................	27	2	0.50	1	0	1
.....AGGGGGACAACACCTATGTGAATC.....................................................................................................................................................................................................................................................	24	2	0.50	1	1	0
..ATGAGGGGGACAACACCTA.............................................................................................................................................................................................................................................................	19	2	0.50	1	1	0
.GATGAGGGGGACAACACCTATGTA.........................................................................................................................................................................................................................................................	24	2	0.50	1	1	0
.GATGAGGGGGACAACACCTATGTGA........................................................................................................................................................................................................................................................	25	2	0.50	1	1	0
....GAGGGGGACAACACCTATGTG.........................................................................................................................................................................................................................................................	21	2	0.50	1	1	0
.......GGGGACAACACCTATGTGAATC.....................................................................................................................................................................................................................................................	22	2	0.50	1	1	0
...TGAGGGGGACAACACCTATGTGAATC.....................................................................................................................................................................................................................................................	26	2	0.50	1	0	1
......GGGGGACAACACCTATGT..........................................................................................................................................................................................................................................................	18	2	0.50	1	1	0
....GAGGGGGACAACACCTATGT..........................................................................................................................................................................................................................................................	20	2	0.50	1	0	1
.....AGGGGGACAACACCTATGTGAA.......................................................................................................................................................................................................................................................	22	2	0.50	1	1	0
.GATGAGGGGGACAACACCTATGTG.........................................................................................................................................................................................................................................................	24	2	0.50	1	1	0
....GAGGGGGACAACACCTATGTGAATC.....................................................................................................................................................................................................................................................	25	2	0.50	1	1	0
....GAGGGGGACAACACCTATG...........................................................................................................................................................................................................................................................	19	2	0.50	1	1	0
GGATGAGGGGGACAACACCT..............................................................................................................................................................................................................................................................	20	2	0.50	1	1	0
...TGAGGGGGACAACACCTATG...........................................................................................................................................................................................................................................................	20	2	0.50	1	1	0
GGATGAGGGGGACAACACCTATGTG.........................................................................................................................................................................................................................................................	25	2	0.50	1	1	0
.GATGAGGGGGACAACACCTATG...........................................................................................................................................................................................................................................................	22	2	0.50	1	0	1
.GATGAGGGGGACAACACC...............................................................................................................................................................................................................................................................	18	2	0.50	1	1	0
..ATGAGGGGGACAACACCTATGTGAATC.....................................................................................................................................................................................................................................................	27	2	0.50	1	1	0
.GATGAGGGGGACAACACCTA.............................................................................................................................................................................................................................................................	20	2	0.50	1	1	0
..ATGAGGGGGACAACACCTATGTGAA.......................................................................................................................................................................................................................................................	25	2	0.50	1	1	0
..ATGAGGGGGACAACACCTATGT..........................................................................................................................................................................................................................................................	22	2	0.50	1	1	0
GGATGAGGGGGACAACACCTATGTGA........................................................................................................................................................................................................................................................	26	2	0.50	1	1	0
....GAGGGGGACAACACCTATGTGAATCA....................................................................................................................................................................................................................................................	26	2	0.50	1	1	0
...................................GTG---CAGGCAGACCAGGTGG.........................................................................................................................................................................................................................	19	3	0.33	1	1	0
..................................GGTG---CAGGCAGACCAGCA...........................................................................................................................................................................................................................	18	9	0.11	1	1	0

dsi_11111

2r:9963026-9963084 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads