ID:

dsi_11096

 Coordinate:

3r:16340750-16340956 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.7 -13.7 -13.6

Flybase annnotation

exon [3r_16340957_16341413_-]; CDS [3r_16340957_16341413_-]; exon [3r_16339794_16340749_-]; CDS [3r_16339794_16340749_-]; intron [3r_16340750_16340956_-]

No Repeatable elements found

mature
  1. dsi_11096  3r:16340832-16340846 -
  2. node_2388:563-577 +
  3. node_4215:923-937 +
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCCTATGTGGTGCAGCTCTCCATACTCGCTGATGAGCTGGCTTTAAATGGGTAAGTCCATTTAGTATATATTTCTGACAACTTATATTAAAGCAATTGGCTTAAAGAATTTATAATCGAGGGTAATCAAATATTTAAACTGAATCACCAAATTCTTTTATGTGGCAGCAGTTGGTGACTGACGTCATCAAACAGATAACTTGCCACGAGCTCGCATATCTTATTTCGATAGTAACCCGAACTTTATCTTGATTTCAGCTATGGCCAAATGATATCGCAATCGCTAATTGATTTCTGTCGCCAGTACA
*************************************************************(((((((..............)))))))...(((((((((.(((((((((...((..((..(((........)))..))..))....))))))))).....)))..))))))..************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M025
embryo
 M023
head
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 M053
female body
 O002
Head
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
........................................CTTTAAATGGGTAAG............................................................................................................................................................................................................................................................ 15 0 3 2.33 7 6 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................................................................................AATCGCTAATTGATTTCTGTCGCC...... 24 0 1 2.00 2 0 2 0 0 0 0 0 0 0
................................................................................................................................................................GTGGCAGCAGTTGGT.................................................................................................................................... 15 0 3 1.00 3 3 0 0 0 0 0 0 0 0
......................TACTCGCTGATGAGCTGGCTT........................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................CGCTAATTGATTTCTGTCGCC...... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................ATGGCTATGGCCAAATGATATCGCAAT........................... 27 3 1 1.00 1 0 0 0 1 0 0 0 0 0
.......TGGTGCAGCTCTCCATACTCGC...................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0
............................................................................................................................................................TTATGTGGCAGTAGTTGGTGA.................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................................................................TATCGCAATCGCTGATTG.................. 18 1 1 1.00 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................TCGCTAATTGATTTCTGTCGCCAGTACA 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................................................................TATGGCCAAATGATATCGCAATCGC........................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................TAGTATATATTTCTGACAACT................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................TTTAAATGGGTAAGT........................................................................................................................................................................................................................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............CTCTCCATACTCGCTGATGAGCTG............................................................................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................................................................................................................TGATCTCTGTCGGCAGTACA 20 2 2 0.50 1 0 0 0 0 1 0 0 0 0
........................................CTTTAAATGGGTAAGACCT........................................................................................................................................................................................................................................................ 19 2 3 0.33 1 0 0 0 1 0 0 0 0 0
........................................CTTTAAATGGGTAAGAC.......................................................................................................................................................................................................................................................... 17 1 5 0.20 1 1 0 0 0 0 0 0 0 0
........................................CTTTAAATGGGTAAGC........................................................................................................................................................................................................................................................... 16 1 5 0.20 1 1 0 0 0 0 0 0 0 0
................................TGAGCTGGGTTTAAA.................................................................................................................................................................................................................................................................... 15 1 13 0.15 2 0 0 0 1 0 0 0 1 0
.................................................................................................................................................................TGGCAGCAGTTGGTGC.................................................................................................................................. 16 1 8 0.13 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................TATCTTGATTTTAGCTA............................................... 17 1 8 0.13 1 1 0 0 0 0 0 0 0 0
.....TGTGGTGAGGGTCTCCATAC.......................................................................................................................................................................................................................................................................................... 20 3 12 0.08 1 1 0 0 0 0 0 0 0 0
........................................CGTTAAATGGGTAAG............................................................................................................................................................................................................................................................ 15 1 12 0.08 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................TAAACTAAATCATCAAATT.......................................................................................................................................................... 19 2 17 0.06 1 0 0 0 0 0 0 0 0 1
................................................................................................................................................................................................................................................CATTAGCTTGTTTTCAGCTA............................................... 20 3 19 0.05 1 0 1 0 0 0 0 0 0 0
............................................AAATGGGTAAGGCCATC...................................................................................................................................................................................................................................................... 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0
...............CTCTCCAAACTCGGTCAT.................................................................................................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1
...............................................................................................................................................................................................................................................................................................TCATTTCTGTCGTCAGTGC. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GGGATACACCACGTCGAGAGGTATGAGCGACTACTCGACCGAAATTTACCCATTCAGGTAAATCATATATAAAGACTGTTGAATATAATTTCGTTAACCGAATTTCTTAAATATTAGCTCCCATTAGTTTATAAATTTGACTTAGTGGTTTAAGAAAATACACCGTCGTCAACCACTGACTGCAGTAGTTTGTCTATTGAACGGTGCTCGAGCGTATAGAATAAAGCTATCATTGGGCTTGAAATAGAACTAAAGTCGATACCGGTTTACTATAGCGTTAGCGATTAACTAAAGACAGCGGTCATGT
************************************************************************************************************************************(((((((..............)))))))...(((((((((.(((((((((...((..((..(((........)))..))..))....))))))))).....)))..))))))..************************************************************* 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
..........................GCGACTACTCGACCGAAA....................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
........................................GAAATTTACCCATTC............................................................................................................................................................................................................................................................ 15 0 3 0.33 1 0 1 0 0 0
...............................................................................................................................................................................................................TCGAGGGATTAGAATAAAGCT............................................................................... 21 3 6 0.17 1 0 0 0 1 0
.............................ACTACTCGACCGGAA....................................................................................................................................................................................................................................................................... 15 1 15 0.13 2 0 0 2 0 0
.....................................................................AAAAGCCTGTTGAATATA............................................................................................................................................................................................................................ 18 2 9 0.11 1 0 0 0 1 0
.............................................................................................................................................................................................TTGTCTATTAAACGGT...................................................................................................... 16 1 14 0.07 1 0 0 1 0 0
..................TTGTATGAGCGACTACT................................................................................................................................................................................................................................................................................ 17 2 16 0.06 1 0 0 1 0 0
...............................................................................................................................................AGTGGTTTAAGAGCAT.................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 1
...................................................................................................................................................................................CTGCAGTAGTTTACCTA............................................................................................................... 17 2 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:16340700-16341006 - dsi_11096 CC----CTATGTGGTGCAGCTCTCCATACTCGCTGATGAGCTGGCTTTAAATGGGTAAGTC--------CATTTAGT-------------------------------------------ATATATTTCTGACAACTTATATTAAAGCAATTGGCTTAAAGAATT---------------------------TATA--------ATCGA------------------------------------------------------------------------------------------------------------------------------------------------GGG--------------TAATCAAATATTTAA-AC------------------------------------------------------TGA--------AT---C--ACCAAATTCTTTTATGTGGCAGCAGTTGGTGACTGACGTCATCAAACA-------GATAACTTGCCACGAGCTCGC---ATATCTTATTTCGATAGTAACCCGAACTTTATC---TTGATTTCAGCTATGGCCAAATGATATCGCAATCGCTAATTGATTTCTGTCGCCAGTACA
droSec2 scaffold_0:17206363-17206673 - CC----CTATGTGGTGCAGCTATCCATACTCGCAGATGAGCTGGCTTTAAATGGGTAAGTC--------CATTTAGTCAAT----GTT----------------------ATGTATGT--ATATATTTCTTGCAACTTATATTAAAGCAATTGGCTT--------------------------------------A--------ATCGA------------------------------------------------------------------------------------------------------------------------------------------------GGG--------------TAATCAAATATTTAA-AC------------------------------------------------------TGA--------AT---C--ACCAAGTTCTTTTATGTGGCAGCACTTGGTGACTGACGTCATCAAAAA-------GATAACTTGCAACGAGCTCGC---ATATCTTATTTCGATAGTAACCCGAACTTTATC---TTGATTCCAGCTATGGCCAAATGATATCGCAATCACTAATTGATTTCTGTCGCCAGTACA
dm3 chr3R:4651081-4651404 + CC----CTATGTGGTGCAGCTCTCCATACTCGCTGATGAGCTGGCTTTAAATGGGTGAGTC--------CATTTAGTCAAT----GTA----------------------ATGTATGTATGTATATTTCTGGCAACTTATGTGAAAGCAATTGGCTTAAAGAATT---------------------------TATA--------ATCGA------------------------------------------------------------------------------------------------------------------------------------------------GGG--------------TAATCAAATATTTAA-AC------------------------------------------------------TGA--------AT---C--ACAAAGTTCTTTTATGTGGCAGCAGTTGGTGACTGACGTCATCAAACA-------GATAACTTGCCACGAGCTTGC---ATATCTTATTTCGATAGTAACCCGAACTTTATC---TTGATTCCAGCTATGGCCAAATGATATCGCAATCGCTAATTGATTTCTGTCGCCAGTACA
droEre2 scaffold_4770:16934902-16935200 - CC----CTATGTGGTGCAGCTCTCCATACTCGCTGATGAGCTGGCTTTAAATGGGTAAGTC--------AAAGTAGTCAAT----GGA-----------------------T------------------------------------------------GAATTTGT----AACTTTTCCTGGGAAACCTT------------------TAATAGATTTGA-----------------------------------------------------------------------------------------------------------------------------------TGG--------------TAATCAAATATATAA-AT--------------------------------------------------------A--------AA---G--ACTAAGTTCTTTTATGTAGCAGCAGCTGGTGACTGACGTCATCAAATA-------GATAACTTGCCACGAACTCGC---CTATCTTATTTCGATAGTAACCCGAACTTTATC---TTAATTCCAGCTACGGCCAAATGATATCGCAGTCGCTAATTGATTTCTGTCGCCAGTACA
droYak3 3R:8713008-8713307 + CC----CTATGTGGTGCAGCTCTCCATACTCGCTGATGAGCTGGCTTTAAATGGGTAAGTC--------CATCTAGTCAAT----GCT-----------------------T------------------------------------------------GAATTTGT--GTACTTTTC--TCGGAAACCTCTATA--------ATGAA------------------------------------------------------------------------------------------------------------------------------------------------TGT--------------TAATCAAATACTTAA-AC---------------------------------------------------TATTGA--------AT---C--ACCAAGTTCTTTTATGTG-CAGCAGCTGGTGACTGACGTCATCAAGCA-------GATAACTTGCCACGAGCTCGC---ATGTCTTATTTCGATAGTAACCCAAACTTTATC---TTCATTCCAGCTACGGCCAAATGATATCGCAATCGCTAATTGACTTCTGTCGCCAGTACA
droEug1 scf7180000409490:69726-70050 - CC----CTACGTAGTTCAGCTCTCCATACTCGCCGATGAACTGGCTCTGAACGGGTGAGTAATCTAACCCATCTAG-----------------------------------------------------------------------CAATCAGGTTAAAAAATAAGT----GCCTTTTC--CCTAAACCAATTTTTTGAATAAAACCA------------------------------------------------------------------------------------------------------------------------------------------------GGT--------------CAACCAAATATGTAG-AT------------------------------------------------------AGATAGATTAACTCAAC--ATATAGTTTATGCATGTGGCAGCTGCT-TTGGTTGACGTCATTAAGTT-------GACAACGTGCCACGCGCTGTT---TTATCTAATTTCGACAGTAAT-CTAACTTTATC---ATATTTCCAGTTATGGCCAAATGATATCACAGTCGCTGATTGACTTTTGTCGTCAGTACA
droBia1 scf7180000302402:7365787-7366092 + CC----CTACGTGGTGCAGCTCTCCATACTCGCCGATGAACTGGCCCTGAACGGGTGAGTA--------CATCTAGTTAACCCTTCTCCA----------------------------------------------------------------------------------------C--TCGCAAGCTTG------------------TAAA-------------------------------------------------------------------------------------------------------------------------------------------TA---TATAAAGCTAAATAAACAAATATTTCACAC--------------------------------------------------TTGGTGA--------TT---CAAACCAAGTTTTCTTATGTGCCAGCAGTTGGTGGCTGACGTCATTGAATAGATAATAGATAACTTGCCACGCGCCCTC---ATATCTTTTTTCAAAAGTAAC-GAATCTTTATC---TGCATTCCAGCTACGGCCAAATGATATCGCAGTCGTTGATTGACTTCTGTCGCCAGTACA
droTak1 scf7180000414009:165980-166197 - CC----CTACGTGGTGCAGCTCTCCATACTCGCCGATGAGCTGGCCCTGAATGGGTGAGTA--------AATC--------------------------------------------------------------------------------------------------------------GGGGACCTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAAAACTAAGTAA----------------------------------------------------------------------------------------------------------ACACCAGCTGCTGGCTGACGTCACCAAATAGATAATAGATAGCTTGCCACGCGCTCCT---ATAACTTATT------------------TTATC---TTCATTCCAGCTACGGCCAAATGATATCGCAGTCGCTGATTGACTTCTGCCGCCAGTACA
droEle1 scf7180000491212:1142265-1142705 - CC----CTACGTGGTGCAGCTCTCCATACTCGCCGATGAGCTGGCTCTGAATGGGTAAGTA--------GATCTTATCGAT----GTCCA----------------------------------------------------------------------------------------A--TGGGAATCTC-------------------------------CATTGTCGCCTTACAAAATAAGTAATTGTATAAATAGAGCCAAATTATCAGATCATATTTTAAATAGTAAAATACATTTTTGTTAACATCCTGTATCGTTTTCCTTTGTAAACGAAAGTA--TTTAAATTAGGT--------------C---------------ACATTTATCAAAAATATTAAAAACCAGGGCATAAAACAAATAAAAAACTGATTCATTGA--------AT---C--ACCAACTTTATTTATTTGGCAGCTGCTGCTGGATGACGTCATTGAATA-------GATAACTTACCACGCGCTCCC---ATATCTTATTTCAATAGTAAT-CAAACCTTGTG---ATAATTCCAGCTATGGCCAAATGATATCGCAGTCGCTCATTGACTTCTGCCGCCAGTATA
droRho1 scf7180000778307:2019-2395 - CC----CTATGTGGTGCAGCTTTCTATACTTGCCGATGAGCTGGCTCTAAATGGGTAAGTA--------GATCTAC-GGAC----ATT--TTTCATTAAGAAACAATATTTTTTCTGTATG---------------------------ACT----------TGACTATTTGT------T----------CTCT-CA--------AAGAAC------------CATT------------------------------------------------------------------------------------TTCTTTACCGTATACCTTTGTAAACGGAAGACATTTTCACTTGGGT--------------TTATCAAACATTAAT-ACTT------------------------------------------TCTAATTCATTGA--------CT---C--ACCAACTCTATATATGTGGCAACTAATGGTGGCTGACGTCATTAAATA-------GATAACTCGCCACGCGTTCTC-TGATATCTTATTTCGATAGTAAC-AAAACTTTATC---TTAATTTCAGATATGGCCAAATGATATCGCAGTCGCTCATTGACTTCTGCCGCCAGTACA
droFic1 scf7180000454106:2516653-2516949 - CC----CTACGTGGTGCAGCTCTCCATTCTGGCTGATGAGCTGGCACTAAATGGGTAAGTA--------GATCTGGTTGAT----T---------------------------------------------------------------------------TGCCTAT----AATTTATTCATTTATAGACA------------------CACTAGATGTGA-----------------------------------------------------------------------------------------------------------------------------------TTGCATTAAGAA-------------CTAATTA-CT--------------------------------------------------------A--------AA-AAC--TTAAAGCTTGTTCATGTGTCAGCTGCCGCTAGCTGACGTCATTAAGTG-------TTTATCTTTCCACGCGCCCGC---ATATCATATTTCGATAGTAAC-CAAGCTTTATT---TTATTTTCAGCTATGGACAAATGATATCGCAGTCGCTGATTGACTTCTGCCGCCAATACA
droKik1 scf7180000302639:1903163-1903280 - A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAGCTAGCAACGCTCCCTCCTCATATCATATTTCGATAATAACTGAAACTTTATC---TTAATTCCAGCTACGGGCAAATGATTTCGCAATCGCTCATAGATTTTTGTCGCCAGTACA
droAna3 scaffold_13340:3423010-3423067 + CC----TTACGTGGTTCAGCTGTCCATACTGGCAGATGAGCTGGCTTTGAATGGGTGAGTT--------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396712:930483-930539 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAGTTATGGACAAATGATATCACAGTCACTCATTGATTTCTGCCGCCAATACA
dp5 2:23131200-23131278 - TG----CTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATAATAA--------TTATC---ATAATTTTAGATATGGCCAAATGATATCACAATCGCTTATTGACTTTTGCCGCCAGTACA
droPer2 scaffold_3:5902999-5903110 - AATTTTCCACGTGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCGCCATATCGAACTAATGCTCTGATAATAA--------TTATC---ATAATTTTAGATATGGCCAAATGATATCACAATCGCTTATTGACTTTTGCCGCCAGTACA
droWil2 scf2_1100000004902:6311890-6311955 + TT----CTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---TTGTTTTTAGATATGGCCAAATGATATCACAATCTCTAATTGACTTTTGCCGCCAATATA
droVir3 scaffold_13047:3051209-3051397 + CC----GTATGTAGTGCAGCTCTCCATTCTGGCCGACGAGCTAGCGTTGAATGGGTAATGT--------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------AT---------------------------------------------CACTGATTAAATTATAGATAATTAGACAAGCATGTTT--GATAACGAATGTC--TCATAAT-GTGCCTTTATC---GGTTTTGTAGCTATGGCCAAATGATCTCGCAGTCACTCATTGATTTTTGCCGCCAGTATA
droMoj3 scaffold_6540:20093186-20093264 + A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATGACC----CTTTATCTATTTTTTTGTAGATATGGACAAATGATCTCACAGTCGCTGATTGATTTTTGCCGCCAGTACA
droGri2 scaffold_15074:7426522-7426577 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGTTATGGTCAAATGATATCGCAGTCGCTGATTGATTTTTGCCGCCAGTACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CC----CTATGTGGTGCAGCTCTCCATACTCGCTGATGAGCTGGCTTTAAATGGGTAAGTC--------CATTTAGT-------------------------------------------ATATATTTCTGACAACTTATATTAAAGCAATTGGCTTAAAGAATT---------------------------TATA--------ATCGA------------------------------------------------------------------------------------------------------------------------------------------------GGG--------------TAATCAAATATTTAA-AC------------------------------------------------------TGA--------AT---C--ACCAAATTCTTTTATGTGGCAGCAGTTGGTGACTGACGTCATCAAACA-------GATAACTTGCCACGAGCTCGC---ATATCTTATTTCGATAGTAACCCGAACTTTATC---TTGATTTCAGCTATGGCCAAATGATATCGCAATCGCTAATTGATTTCTGTCGCCAGTACASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................CTTTAAATGGGTAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1532.33700000000106000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGCTAATTGATTTCTGTCGCC......2412.00200200000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCAGCAGTTGGT.................................................................................................................................................1531.00300000000003000000
..........................TACTCGCTGATGAGCTGGCTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTAATTGATTTCTGTCGCC......2111.00100100000000000000
...........TGGTGCAGCTCTCCATACTCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000100000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTAATTGATTTCTGTCGCCAGTACA2811.00100000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGCCAAATGATATCGCAATCGC........................2511.00100000000001000000
.........................................................................TAGT-------------------------------------------ATATATTTCTGACAACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.............................................TTTAAATGGGTAAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000000001000000
...................CTCTCCATACTCGCTGATGAGCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
............................................CTTTAAATGGGTAAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1650.20100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCAGCAGTTGGTGC...............................................................................................................................................1680.13100000000001000000
droSec2
CC----CTATGTGGTGCAGCTATCCATACTCGCAGATGAGCTGGCTTTAAATGGGTAAGTC--------CATTTAGTCAAT----GTT----------------------ATGTATGT--ATATATTTCTTGCAACTTATATTAAAGCAATTGGCTT--------------------------------------A--------ATCGA------------------------------------------------------------------------------------------------------------------------------------------------GGG--------------TAATCAAATATTTAA-AC------------------------------------------------------TGA--------AT---C--ACCAAGTTCTTTTATGTGGCAGCACTTGGTGACTGACGTCATCAAAAA-------GATAACTTGCAACGAGCTCGC---ATATCTTATTTCGATAGTAACCCGAACTTTATC---TTGATTCCAGCTATGGCCAAATGATATCGCAATCACTAATTGATTTCTGTCGCCAGTACASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCACTAATTGATTTCTGTCGC.......2411.0010010
..........................................GGCTTTAAATGGGTAAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
dm3
CC----CTATGTGGTGCAGCTCTCCATACTCGCTGATGAGCTGGCTTTAAATGGGTGAGTC--------CATTTAGTCAAT----GTA----------------------ATGTATGTATGTATATTTCTGGCAACTTATGTGAAAGCAATTGGCTTAAAGAATT---------------------------TATA--------ATCGA------------------------------------------------------------------------------------------------------------------------------------------------GGG--------------TAATCAAATATTTAA-AC------------------------------------------------------TGA--------AT---C--ACAAAGTTCTTTTATGTGGCAGCAGTTGGTGACTGACGTCATCAAACA-------GATAACTTGCCACGAGCTTGC---ATATCTTATTTCGATAGTAACCCGAACTTTATC---TTGATTCCAGCTATGGCCAAATGATATCGCAATCGCTAATTGATTTCTGTCGCCAGTACASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTATC---TTGATTCCAGCTAT..............................................21114.001400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TACTCGCTGATGAGCTGGCTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGTTGGTGACTGACGTC.......................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................TCTCCATACTCGCTGATGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCTAATTGATTTCTGTCG........2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGATTTCTGTCGCCAGTA..2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................TACTCGCTGATGAGCTGGCTTTAAATGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGTTGGTGACTGACGTCA......................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000010
..................................................................................................................................................................ATT---------------------------TATA--------ATCGA------------------------------------------------------------------------------------------------------------------------------------------------GGG--------------TAATCA....................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
........................CATACTCGCTGATGAGCTGGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
..................GCTCTCCATACTCGCTGATGAGCTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGCCAAATGATATCGCAATCGCTAA.....................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGCCAAATGATATCGCAATCGCT.......................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GCTTTAAATGGGTGAGTC--------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000
.......................CCATACTCGCTGATGAGCTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000
................................CTGATGAGCTGGCTTTAAATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................TTAA-AC------------------------------------------------------TGA--------AT---C--ACAAAGTTC......................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ATACTCGCTGATGAGCTGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAATTGATTTCTGTCGCCA.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTATC---TTGATTCCAGCTATG.............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................TGGCTTTAAATGGGTGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..........................TACTCGCTGATGAGCTGGCTTTAAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATTTCTGTCGCCAGTAC.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................GAATT---------------------------TATA--------ATCGA------------------------------------------------------------------------------------------------------------------------------------------------GGG--------------TAAT......................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CTGGCTTTAAATGGGTGAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TCTCCATACTCGCTGATGAGCTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................ATGAGCTGGCTTTAAATGGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTATC---TTGATTCCA...................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................ATTTAA-AC------------------------------------------------------TGA--------AT---C--ACAAAGT........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CAGCTCTCCATACTCGCTGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CCATACTCGCTGATGAGCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CTCCATACTCGCTGATGAGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...........................................................................................................................................................TTAAAGAATT---------------------------TATA--------ATCGA------------------------------------------------------------------------------------------------------------------------------------------------GG.........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................AAAGAATT---------------------------TATA--------ATCGA------------------------------------------------------------------------------------------------------------------------------------------------GGG--------------T.........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATGTGGCAGCAGTTGGTG................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGATTTCTGTCGCCAGTACA2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-------GATAACTTGCCACGAGCT......................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTTATGTGGCAGCAGTTG...................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GATGAGCTGGCTTTAAATGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................GCTGATGAGCTGGCTTTAAATGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGCCAAATGATATCGCAATCGCG.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATGGCCAAATGATAT.................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACA-------GATAACTTGCCACGAGCT......................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTGGCAGCAGTTGGTGAC..............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATATCGCAATCGCTAATTGATTTC.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC---ATATCTTATTTCGATAGT..............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
......................................AGCTGGCTTTAAATGGGTGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAACTTTATC---TTGATTCCAG..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TCTCCATACTCGCTGATGAGCTGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................TACTCGCTGATGAGCTGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GCTGATGAGCTGGCTTTAAATGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................CTCCATACTCGCTGATGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TCCATACTCGCTGATGAGCTGGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATC---TTGATTCCAGCTATGGC...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................TATA--------ATCGA------------------------------------------------------------------------------------------------------------------------------------------------GGG--------------TAATCAAAT.................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGCAATCGCTAATTGATT...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-------GATAACTTGCCACGAGCTT.....................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGGCAGCAGTTGGTGACT.............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CGCTGATGAGCTGGCTTTAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................CTCTCCATACTCGCTGATGAGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................TTATGTGAAAGCAATTGGCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TCTCCATACTCGCTGATGAGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGCAATCGCTAATTGAT................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.........................................................................................................................TATATTTCTGGCAACTTATGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA-------GATAACTTGCCACGAGCT......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...........................ACTCGCTGATGAGCTGGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GCTGGCTTTAAATGGGTGAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TATGTGGTGCAGCTCTTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CC----CTATGTGGTGCAGCTCTCCATACTCGCTGATGAGCTGGCTTTAAATGGGTAAGTC--------AAAGTAGTCAAT----GGA-----------------------T------------------------------------------------GAATTTGT----AACTTTTCCTGGGAAACCTT------------------TAATAGATTTGA-----------------------------------------------------------------------------------------------------------------------------------TGG--------------TAATCAAATATATAA-AT--------------------------------------------------------A--------AA---G--ACTAAGTTCTTTTATGTAGCAGCAGCTGGTGACTGACGTCATCAAATA-------GATAACTTGCCACGAACTCGC---CTATCTTATTTCGATAGTAACCCGAACTTTATC---TTAATTCCAGCTACGGCCAAATGATATCGCAGTCGCTAATTGATTTCTGTCGCCAGTACASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATATCGCAGTCGCTAATTGATT...............2411.0011000000
..................................GATGAGCTGGCTTTAAATGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
droYak3
CC----CTATGTGGTGCAGCTCTCCATACTCGCTGATGAGCTGGCTTTAAATGGGTAAGTC--------CATCTAGTCAAT----GCT-----------------------T------------------------------------------------GAATTTGT--GTACTTTTC--TCGGAAACCTCTATA--------ATGAA------------------------------------------------------------------------------------------------------------------------------------------------TGT--------------TAATCAAATACTTAA-AC---------------------------------------------------TATTGA--------AT---C--ACCAAGTTCTTTTATGTG-CAGCAGCTGGTGACTGACGTCATCAAGCA-------GATAACTTGCCACGAGCTCGC---ATGTCTTATTTCGATAGTAACCCAAACTTTATC---TTCATTCCAGCTACGGCCAAATGATATCGCAATCGCTAATTGACTTCTGTCGCCAGTACASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................CTCTCCATACTCGCTGATGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.......................CCATACTCGCTGATGAGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
droEug1
CC----CTACGTAGTTCAGCTCTCCATACTCGCCGATGAACTGGCTCTGAACGGGTGAGTAATCTAACCCATCTAG-----------------------------------------------------------------------CAATCAGGTTAAAAAATAAGT----GCCTTTTC--CCTAAACCAATTTTTTGAATAAAACCA------------------------------------------------------------------------------------------------------------------------------------------------GGT--------------CAACCAAATATGTAG-AT------------------------------------------------------AGATAGATTAACTCAAC--ATATAGTTTATGCATGTGGCAGCTGCT-TTGGTTGACGTCATTAAGTT-------GACAACGTGCCACGCGCTGTT---TTATCTAATTTCGACAGTAAT-CTAACTTTATC---ATATTTCCAGTTATGGCCAAATGATATCACAGTCGCTGATTGACTTTTGTCGTCAGTACASizeHit CountTotal NormTotal
No Reads
droBia1
CC----CTACGTGGTGCAGCTCTCCATACTCGCCGATGAACTGGCCCTGAACGGGTGAGTA--------CATCTAGTTAACCCTTCTCCA----------------------------------------------------------------------------------------C--TCGCAAGCTTG------------------TAAA-------------------------------------------------------------------------------------------------------------------------------------------TA---TATAAAGCTAAATAAACAAATATTTCACAC--------------------------------------------------TTGGTGA--------TT---CAAACCAAGTTTTCTTATGTGCCAGCAGTTGGTGGCTGACGTCATTGAATAGATAATAGATAACTTGCCACGCGCCCTC---ATATCTTTTTTCAAAAGTAAC-GAATCTTTATC---TGCATTCCAGCTACGGCCAAATGATATCGCAGTCGTTGATTGACTTCTGTCGCCAGTACASizeHit CountTotal NormTotal
No Reads
droTak1
CC----CTACGTGGTGCAGCTCTCCATACTCGCCGATGAGCTGGCCCTGAATGGGTGAGTA--------AATC--------------------------------------------------------------------------------------------------------------GGGGACCTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAAAACTAAGTAA----------------------------------------------------------------------------------------------------------ACACCAGCTGCTGGCTGACGTCACCAAATAGATAATAGATAGCTTGCCACGCGCTCCT---ATAACTTATT------------------TTATC---TTCATTCCAGCTACGGCCAAATGATATCGCAGTCGCTGATTGACTTCTGCCGCCAGTACASizeHit CountTotal NormTotal
No Reads
droEle1
CC----CTACGTGGTGCAGCTCTCCATACTCGCCGATGAGCTGGCTCTGAATGGGTAAGTA--------GATCTTATCGAT----GTCCA----------------------------------------------------------------------------------------A--TGGGAATCTC-------------------------------CATTGTCGCCTTACAAAATAAGTAATTGTATAAATAGAGCCAAATTATCAGATCATATTTTAAATAGTAAAATACATTTTTGTTAACATCCTGTATCGTTTTCCTTTGTAAACGAAAGTA--TTTAAATTAGGT--------------C---------------ACATTTATCAAAAATATTAAAAACCAGGGCATAAAACAAATAAAAAACTGATTCATTGA--------AT---C--ACCAACTTTATTTATTTGGCAGCTGCTGCTGGATGACGTCATTGAATA-------GATAACTTACCACGCGCTCCC---ATATCTTATTTCAATAGTAAT-CAAACCTTGTG---ATAATTCCAGCTATGGCCAAATGATATCGCAGTCGCTCATTGACTTCTGCCGCCAGTATASizeHit CountTotal NormTotal
No Reads
droRho1
CC----CTATGTGGTGCAGCTTTCTATACTTGCCGATGAGCTGGCTCTAAATGGGTAAGTA--------GATCTAC-GGAC----ATT--TTTCATTAAGAAACAATATTTTTTCTGTATG---------------------------ACT----------TGACTATTTGT------T----------CTCT-CA--------AAGAAC------------CATT------------------------------------------------------------------------------------TTCTTTACCGTATACCTTTGTAAACGGAAGACATTTTCACTTGGGT--------------TTATCAAACATTAAT-ACTT------------------------------------------TCTAATTCATTGA--------CT---C--ACCAACTCTATATATGTGGCAACTAATGGTGGCTGACGTCATTAAATA-------GATAACTCGCCACGCGTTCTC-TGATATCTTATTTCGATAGTAAC-AAAACTTTATC---TTAATTTCAGATATGGCCAAATGATATCGCAGTCGCTCATTGACTTCTGCCGCCAGTACASizeHit CountTotal NormTotal
No Reads
droFic1
CC----CTACGTGGTGCAGCTCTCCATTCTGGCTGATGAGCTGGCACTAAATGGGTAAGTA--------GATCTGGTTGAT----T---------------------------------------------------------------------------TGCCTAT----AATTTATTCATTTATAGACA------------------CACTAGATGTGA-----------------------------------------------------------------------------------------------------------------------------------TTGCATTAAGAA-------------CTAATTA-CT--------------------------------------------------------A--------AA-AAC--TTAAAGCTTGTTCATGTGTCAGCTGCCGCTAGCTGACGTCATTAAGTG-------TTTATCTTTCCACGCGCCCGC---ATATCATATTTCGATAGTAAC-CAAGCTTTATT---TTATTTTCAGCTATGGACAAATGATATCGCAGTCGCTGATTGACTTCTGCCGCCAATACASizeHit CountTotal NormTotal
No Reads
droKik1
A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAGCTAGCAACGCTCCCTCCTCATATCATATTTCGATAATAACTGAAACTTTATC---TTAATTCCAGCTACGGGCAAATGATTTCGCAATCGCTCATAGATTTTTGTCGCCAGTACASizeHit CountTotal NormTotal
No Reads
droAna3
CC----TTACGTGGTTCAGCTGTCCATACTGGCAGATGAGCTGGCTTTGAATGGGTGAGTT--------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................CTGGCAGATGAGCTGGCTTTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droBip1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTAGTTATGGACAAATGATATCACAGTCACTCATTGATTTCTGCCGCCAATACASizeHit CountTotal NormTotal
No Reads
dp5
TG----CTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATAATAA--------TTATC---ATAATTTTAGATATGGCCAAATGATATCACAATCGCTTATTGACTTTTGCCGCCAGTACASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGATATCACAATCGCTTATT...................2311.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGCCAAATGATATCACAATCGCTT......................2811.0010010000000
droPer2
AATTTTCCACGTGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCGCCATATCGAACTAATGCTCTGATAATAA--------TTATC---ATAATTTTAGATATGGCCAAATGATATCACAATCGCTTATTGACTTTTGCCGCCAGTACASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TT----CTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---TTGTTTTTAGATATGGCCAAATGATATCACAATCTCTAATTGACTTTTGCCGCCAATATASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
CC----GTATGTAGTGCAGCTCTCCATTCTGGCCGACGAGCTAGCGTTGAATGGGTAATGT--------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------AT---------------------------------------------CACTGATTAAATTATAGATAATTAGACAAGCATGTTT--GATAACGAATGTC--TCATAAT-GTGCCTTTATC---GGTTTTGTAGCTATGGCCAAATGATCTCGCAGTCACTCATTGATTTTTGCCGCCAGTATASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............AGTGCAGCTCTCCATTCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATTGATTTTTGCCGCCA.....2011.001000000000000000000000000000100000000000000000000000000000000000
.................................CGACGAGCTAGCGTTGAATGGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-GTGCCTTTATC---GGTTTTGT....................................................2111.001000000000000000000000001000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGCCAAATGATCTCGCAGTCA.........................2411.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCTTTATC---GGTTTTGTAG..................................................2111.001000000000000000000000000001000000000000000000000000000000000000
....................TCTCCATTCTGGCCGACGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCCAAATGATCTCGCAGT...........................2111.001000000000001000000000000000000000000000000000000000000000000000
.......................................................TAATGT--------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------AT---------------------------------------------CACTGATTAA..............................................................................................................................2011.001000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAATGATCTCGCAGTCAC........................2111.001000000000000000001000000000000000000000000000000000000000000000
........................................................AATGT--------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------AT---------------------------------------------CACTGATTAAATT...........................................................................................................................2211.001000000000000000000000000100000000000000000000000000000000000000
droMoj3
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATGACC----CTTTATCTATTTTTTTGTAGATATGGACAAATGATCTCACAGTCGCTGATTGATTTTTGCCGCCAGTACASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGTCGCTGATTGATTTTTGCCGCCA.....2811.001100000
droGri2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGTTATGGTCAAATGATATCGCAGTCGCTGATTGATTTTTGCCGCCAGTACASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATTGATTTTTGCCGCCAGTAC.2511.00110

Generated: 05/19/2015 at 12:29 AM