ID:dsi_11076 |
Coordinate:3l:7718328-7718393 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3l_7717386_7718327_-]; CDS [3l_7717386_7718327_-]; CDS [3l_7718394_7718744_-]; exon [3l_7718394_7718744_-]; intron [3l_7718328_7718393_-]
No Repeatable elements found
| ##################################################------------------------------------------------------------------################################################## TTTATACCACAGAGTCCAACTACGTGGGCATATTGGACACCATACTGAATGTAGGTTGAGTAACTTGTAACTTGCTACCTATATCAGTTTTATTTATTTGTTCTACTCGTTTTCAGCTTTTTAAAAACAAGTTGGAAGAGTTGGCCGAAACCAATGATCCGCTGCT **************************************************((((((..(((((........)))))))))))..................................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................TAAAAACAAGTTGGAAGAGTTGGCCGA.................. | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................................................................TAACAAGTTGGATGAGTTGGTC.................... | 22 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................TGGGCATATTGGACACCATACTGAATC................................................................................................................... | 27 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................................................................AAAAAATAAGTTGGAGGAGTT........................ | 21 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 |
| ........................TGGGAATATTGGACA............................................................................................................................... | 15 | 1 | 15 | 0.20 | 3 | 1 | 2 | 0 |
| ..........................................................................................................TCGTGATCAGCTTCTTAAAA........................................ | 20 | 3 | 12 | 0.08 | 1 | 0 | 0 | 1 |
| ...........................................AGTGAACGTAGGTTG............................................................................................................ | 15 | 2 | 20 | 0.05 | 1 | 0 | 1 | 0 |
|
AAATATGGTGTCTCAGGTTGATGCACCCGTATAACCTGTGGTATGACTTACATCCAACTCATTGAACATTGAACGATGGATATAGTCAAAATAAATAAACAAGATGAGCAAAAGTCGAAAAATTTTTGTTCAACCTTCTCAACCGGCTTTGGTTACTAGGCGACGA
**************************************************((((((..(((((........)))))))))))..................................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M023 head |
M024 male body |
SRR553486 Makindu_3 day-old ovaries |
SRR553485 Chicharo_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|
| ......GGGGTTTCAGGTTGATGC.............................................................................................................................................. | 18 | 2 | 4 | 1.00 | 4 | 3 | 1 | 0 | 0 | 0 |
| ..............................................................................GAGATAGTCAAAAAAAATAAA................................................................... | 21 | 2 | 2 | 0.50 | 1 | 0 | 0 | 1 | 0 | 0 |
| .......GGGTTTCAGGTTGATGCTC............................................................................................................................................ | 19 | 3 | 20 | 0.20 | 4 | 2 | 2 | 0 | 0 | 0 |
| ......GGGGTTTCAGGTTGATGCTC............................................................................................................................................ | 20 | 3 | 6 | 0.17 | 1 | 0 | 1 | 0 | 0 | 0 |
| .......GGGTTTCAGGTTGATGC.............................................................................................................................................. | 17 | 2 | 14 | 0.07 | 1 | 0 | 0 | 0 | 1 | 0 |
| ........................................................................................................TGAGCAAAAGTCCAA............................................... | 15 | 1 | 17 | 0.06 | 1 | 0 | 0 | 0 | 0 | 1 |
| ...................................................................................................TAAGATTAGCAAAAGTCG................................................. | 18 | 2 | 18 | 0.06 | 1 | 0 | 1 | 0 | 0 | 0 |
Generated: 04/24/2015 at 10:27 AM