ID:

dsi_11050

 Coordinate:

3r:11692761-11692910 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.3 -28.2 -28.2

Flybase annnotation

five_prime_UTR [3r_11692570_11692712_+]; CDS [3r_11692713_11692760_+]; exon [3r_11692570_11692760_+]; intron [3r_11692761_11693599_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GAATGGCGGAACAGAACGATTCCAACGGAAACTACGACGATGGTGAAGAGGTGAGTTGCAGAATGAACATCGCGCGTGAAAGTGTAAAATGTTGACGCCGACAATATTCGCGTATAATATACATTCAAGCGGTTTTTTTTTTACCGAAAGTTAAGTACGTGTAATTATGCGGTACATCGATCCCTGTGCGAATTTAACCAGATTCAAGTTTATTGACCTCTTTTGGCGAGAAATATACGTAATTTCCGAT
**************************************************.((((((...(((((....(((.((((.((.((.....)).)).)))))))...))))).((((((((.(((((.....((((.........))))............)))))))))))))(((((........))))).))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR902008
ovaries
 GSM343915
embryo
...................TTCCAACGGAAACTACGACGATGGTGA............................................................................................................................................................................................................ 27 0 1 4.00 4 2 0 0 0 1 0 0 1
....................TCCAACGGAAACTACGACGATGGTGA............................................................................................................................................................................................................ 26 0 1 4.00 4 4 0 0 0 0 0 0 0
..........................GGAAACTACGACGATGGTGAAGAGA....................................................................................................................................................................................................... 25 1 1 2.00 2 1 1 0 0 0 0 0 0
.....................CCAACGGAAACTACGACGATGGTGA............................................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0
....................TCCAACGGAAACTACGACGATGGT.............................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0
.............................................AAGAGGTGAGTTGCAGAATGG........................................................................................................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 1 0 0
.....................................CGATGGTGAAGAGCAGTGTTG................................................................................................................................................................................................ 21 3 1 1.00 1 0 0 0 1 0 0 0 0
...TGGCGGAACAAAACGATTCCAACGGA............................................................................................................................................................................................................................. 26 1 1 1.00 1 0 1 0 0 0 0 0 0
......................CAACGGAAACTACGACGATGG............................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0
..............AACGATTCCAACGGAAACT......................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0
..............AACGATTCCAACGGAAA........................................................................................................................................................................................................................... 17 0 1 1.00 1 0 0 1 0 0 0 0 0
.....................CCAACGGAAACTACGACGATGGTGAA........................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................................................................TTAAGTACGTGGAATTATGCGGT............................................................................. 23 1 1 1.00 1 0 0 0 0 1 0 0 0
....................TCCAACGGAAACTACGACGATGGTGAAG.......................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0
..ATGGCGGAACAGAACGATTCCA.................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0
.....................................................................................................................................................................TATGCGGTACATCGATCCCTGTGCGA........................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0
...................TTCCAACGGAAACTACGACGATGGTGAA........................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
....................ATCAACGGAAACTACGACGATGGTGAA........................................................................................................................................................................................................... 27 2 1 1.00 1 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................TTTTGGCGAGAAATATACGTAATT...... 24 0 1 1.00 1 0 0 1 0 0 0 0 0
....................TCCAACGGAAACTACGACGATGGTGAA........................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0
...............ACGATTCCAACGGAAACTACGACGAAA................................................................................................................................................................................................................ 27 2 1 1.00 1 0 0 0 0 0 0 1 0
.................................................GGTGAGTTGCAGAATGGCCATT................................................................................................................................................................................... 22 3 2 0.50 1 0 0 0 0 0 1 0 0
.............................................AAGAGATGAGTTGCTGAATGG........................................................................................................................................................................................ 21 3 3 0.33 1 0 0 1 0 0 0 0 0
............................................................................TGAAAGTGTTGACTGTTGACG......................................................................................................................................................... 21 3 4 0.25 1 0 0 1 0 0 0 0 0
...................................................................................................................................................................ATTCTGCGGTACATC........................................................................ 15 1 8 0.25 2 0 0 0 2 0 0 0 0
........................................................................................................................................................................................................................CCTCTTTTGGCGAGA................... 15 0 5 0.20 1 0 0 0 1 0 0 0 0
.................GATTCCAACGGAATCT......................................................................................................................................................................................................................... 16 1 6 0.17 1 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................TGTATTGACCTCTTATG......................... 17 2 15 0.07 1 0 0 1 0 0 0 0 0
....................................................................................TAAAAGGTTGACGCGG...................................................................................................................................................... 16 2 20 0.05 1 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................GAGGAATATACGGAATCT..... 18 3 20 0.05 1 0 1 0 0 0 0 0 0
...................................................................CATCGCGCGTAAAGGT....................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 1 0 0 0

Anti-sense strand reads

CTTACCGCCTTGTCTTGCTAAGGTTGCCTTTGATGCTGCTACCACTTCTCCACTCAACGTCTTACTTGTAGCGCGCACTTTCACATTTTACAACTGCGGCTGTTATAAGCGCATATTATATGTAAGTTCGCCAAAAAAAAAATGGCTTTCAATTCATGCACATTAATACGCCATGTAGCTAGGGACACGCTTAAATTGGTCTAAGTTCAAATAACTGGAGAAAACCGCTCTTTATATGCATTAAAGGCTA
**************************************************.((((((...(((((....(((.((((.((.((.....)).)).)))))))...))))).((((((((.(((((.....((((.........))))............)))))))))))))(((((........))))).))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
..................................GCTGCTACCACTTCTCCACTC................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0
.......................................................................................................................................................................................................TCTAAGTTCAAATAACTGGAG.............................. 21 0 1 1.00 1 0 1 0 0 0 0 0
.................................TGCTGCTACCACTTCTCCACT.................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
................................ATGCTGCTACCACTTCTCCAC..................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
............TCTTGCTAGGGTTGCC.............................................................................................................................................................................................................................. 16 1 4 0.25 1 0 0 0 1 0 0 0
....................................................................................................................................................................................AGGGACAAGCCTAAATTGGTG................................................. 21 3 4 0.25 1 0 0 1 0 0 0 0
.....................................................................................................................................AAAAAAAAATGGCGTGCAATTA............................................................................................... 22 3 4 0.25 1 0 0 1 0 0 0 0
.........TTGTCTTACTAAGGT.................................................................................................................................................................................................................................. 15 1 8 0.13 1 0 0 0 0 0 1 0
.........TTGTCTTCCAAAGGTTG................................................................................................................................................................................................................................ 17 2 19 0.11 2 0 0 0 0 2 0 0
....................................................................................................................................AAAAAAAAAATGGCTGGGAAT................................................................................................. 21 3 16 0.06 1 0 0 0 0 0 0 1
.........................................................................................ACCACTGCGGCTGTT.................................................................................................................................................. 15 1 19 0.05 1 0 0 0 0 1 0 0
........................................................................................................................................AAAAAATGGCTGTGAATT................................................................................................ 18 2 19 0.05 1 0 0 1 0 0 0 0
....................................................................................................................................AAAAAAAAAATGGCTTA..................................................................................................... 17 1 19 0.05 1 0 0 0 1 0 0 0
......ACCATGTCTTACTAAGGT.................................................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 1 0
...........GCCTTGCTAAGCTTGC............................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:11692711-11692960 + dsi_11050 GAATGGCGGAACAGAACGATTCCAACGGAAACTACGACGATGGTGAAGAGGTGAGTT---GCAGAATG----------------------------------AACATCGCGCGTGAAAG---------TGTAAAATGTTGACGCCGACAATATTCGC-GTATAATAT--ACATTCAAGCGGTTTTT------TTTT-T--------AC--CG------AAAGTTAAG----TACGTGT-----------AATTAT--GCGGTACATCGATCCCTGTG----CGAATTTAACCAGA-----------TTCAAGTTTATTG---ACCTCTTTTGGCGAG-----AA--ATA-TACGTAAT---T--TC--CGAT
droSec2 scaffold_0:12520761-12521014 + GAATGGCGGAACAAAACGATTCCAACGGAAACTACGACGATGGTGAAGAGGTGAGTT---GCAGAATG----------------------------------ACCATCGCGCGTGAAAG---------TGTAAAATGTTGACGCCGACAATATTCGC-GTATAATAT--ACATTCAAGCGGTTTTT------TTTT-T----TTTTAC--CA------AAAGTTAAG----TACGTGG-----------AATTAT--GCGGGACATCGATCCCTGTG----CGAATTTAACCAGC-----------TTCAAGTTTATTG---ACCTCTTTTGGCGAG-----AA--ATA-TACGTAAT---T--TC--CGAT
dm3 chr3R:9485859-9486111 - GAATGGCGGAACAAAACGATTCCAACGGAAACTACGACGATGGTGAAGAGGTGAGTT---GCAGAATG-AC--C--A-ATTGCT-GTTTGTAAATC-----GTTCATCGCGCGTGAAAG---------TGCAAAATGTCGACGCCGACAATATTCGT-GTATAATAT--ACATTCACGCCGCTTTT---------T-T--------AC--CG-------------------------------------AATTAT--GGGGGCCATCGATCCCTGTG----CGAATTTAGCCAGC-----------TAAAAGTTTATCG---ACCTCTTTTGGCGAG-----AA--ATA-TAAGCAAT---T--TC--CGAT
droEre2 scaffold_4770:12149483-12149750 + GAATGGCGGATCTGAACGACTCCAACGGAAACTACGACGATGGTGACGAGGTGAGTG---GCAAAATG-TT--C--A-ATTACT-TC------------TTGGCCAGTGCATAGAAAAG---------TGCAAAATGTCGACGCCGACAATTCTTGC-ACATGCTAT--A---TCATGTGGCTTTAGCGGCTTTTG-C--------CC--CG------AAAGTAAAG----TACGTGG-----------AATTGT--GAAGGCCATCGATCCCTGTG----TAAACT-----------TGACAAGATACAAGTATATTG---ACCCCTTCTTGCGAA-----AA--ATA-TATGTAAT---T--GC--CGAT
droYak3 3R:13794912-13795171 - GAATGGCGGATATTAACGACTCCAACGGAAACTACGACGATGGCGACGAGGTGAGTG---ACAAAATG-TT--C--A-ATTACT-TTT-----------TGTGCCAGCGCGTGGGAAAG---------TGCAAAATGTCGACGCCGACAATTCTTGC-ATATAATAT--A---GCACGCGGCTTTT---------G-C--------CC--CG------AAAGTAAAG----TACGTGG-----------AATTGT--GCAGGCCATCGATCTCTGTG----CGAATTTAACAAGG-----------TACAAGTTTGTTG---ACCCCCTTTTGCGAA-----AA--ATA-TATGTAAT---T--GC--CGAT
droEug1 scf7180000405137:900-1173 + TAATGGCGGATCTGAACGATTCCAATGGAAACTACGACGATGGTGACGAGGTGAGTT---TAATGAG--AT--T--A-ATTTCC-A-------------AATGTAATCGCGTGGAAAAG---------TGCAAAATGTCGACGCCGACAATTTTTGC-AGAGAATGT--A---GCACGCGGCTTTT------TTTT-C--------TC--GG------CCAATTAAG----TACGTGG-----------AATTAA--ACAGGTCTTCGGTCTTTATT----CGCTTTCAACCGGTTAATGGCACTAAAAAAGTTTAATA---ACCCTTATCGGGGA------AAACGTA-TGTATAAT---T--ATTACAAA
droBia1 scf7180000302402:2218770-2219029 - TAATGGCGGATCTCAACGACTCCAACGGAAACTACGACGATGGTGACGAGGTGAGTT---GTCGAGC--TG--C--G-CTTTCT-GG------------TTCGCCAACGCGTGGGAAAG---------TGCAAATTGTCGACGCCGACAAAT-TCGC-AGGTAACTC--G---GCACGCGGCTTTT---------TTC--------GC--TG-------------------GCTGTGG-----------AATTGT--ACAGGTCTTCGCTCTTTGTC----CGAATTCAACCGGTTATTGACTCGGCGCCGGTTTAATG---CCCCCTTTTTGGGA------AAATATA-CGCATAAT---T--G---TGAG
droTak1 scf7180000415380:288576-288840 - TCATGGCGGATCTGAACGACTCCAATGGAAACTACGACGATGGCGACGAGGTGAGTGGTTGTTAAACAACG--C--A-CTTTTT-TC------------TATGTCAACGCGTGGGAAAG---------TGCAAAATGTCGACGCCGACAAAATTTGC-AACG--CTC--A---GCACGCGGCTTTT---------TTC--------GC--TG------GGTGTAAAG----TACT----------------TTAA--GCAGGT---------CTGTC----CGAATTCAACCGGTTATTGACACTGCTTGAGTTAAATGGAGCCCCATTTTGGGGCAAC---AA-TATA-TACATAAT---T--GT--TAAA
droEle1 scf7180000491047:1709328-1709594 + GAATGGCGGATCTTAACGACTCTAATGGAAACTACGACGACGGTGACGAGGTGAGTT---ATTTATT--CG--TTGAAA----TTCT------------TTAGCAAACGCACGAGAAAG---------TGCAAAATGTCGACGCCGAAAGAA-TTGC-AAG-AATAT--A---ACACGCGGCTTTT------TTTT-T--------AC--T-------------TAT----GATGTGTACACATTTG-GGATTGT--CTGAGTCTTTGCT-----TG----TGGATTGATCGGGTTAATGACACTGCAAAAGTTTGATG---GCCCTTGTCTCGGA------A-----A-CATGTAATTGAA--TA--AAAA
droRho1 scf7180000777292:4209-4470 - GAATGGCGGATCTGAACGACTCCAATGGAAACTACGACGATGGTGATGAGGTAAGTT---AATATAT--CG-CG-AAAG----TTCA-----------ATATCCAAACGCGTGGGAAAG---------TGCA-AATGTCGACGCCGACAAAT-TGGC-AATG-AATT--A---ACACGCGGCTTTT---------T-T--------G---------------TACAA----TATGTGTATTCATATGTGTATT---------AAATAGGTCTTTGTT----CGGATTCAGCGGGTTAATGACACTGCAAAAGTTTGATG---GCCCTTTTCTCGCA------A-----A-CATGTAATTGA---TT--AAAA
droFic1 scf7180000453906:11378-11611 + GAATGGCAGATTTAAACGACTCCAATGGAAACTACGATGATGGCGATGAGGTGAGTT---AACAAAA-----------------------------------------------GAAAC---TATGTATGCAAAATGTCGACGCCGACAAAA-TTGC-A----------------ACGCGGCTTTT---------T-C--------GG--TG------ACAATTGAA----TAGGTGC-----------GATTAA--GTGGACCATTCATCTTTGTT----GGCATTCAGCCGGTTAATGACACCTCACAAGTTTGATG---ACCCTTTTTCGGTG------AATTATG-TTTATAAT----------CAAT
droKik1 scf7180000302392:315385-315656 + -AATGGCGGATTTGAACGACTCCAATGGAAACTATGACGACTGCGACGAGGTGAGTT---TTGTTTT--TG--T--C-G----------------------GCTTTTCGC--GGGGAGGGGCGGGCGACGGAAAATGTCGACGCCGACAATT-TCGC-ACCGAAATT--A---GCATGCGGCGTTT---------T-C--------TC--TG------ACGG--GAA----TAAGTGC-----------AATTGCC-GGGGGTCTTCGATCTCGATTCGGGC-TCCTCCGGCGGCCAATGACACGGCAAAAGTTGAAGG---CCCTTTTTTCGCCAGAC---AA--ATA-CAATTGATT--TGAGC--GAAT
droAna3 scaffold_13340:2034500-2034766 - TAATGGCTGATATAAACGACTCCAACGGAAACTACGACGACTGCGATGAGGTAAGCA---CAATGAT--TC--C--A-ATTATT-TC---TAAATT------ATTTTCGCCAATAAATA---------CGTG-TTCGCCGACGCCGACAGTTTTTGC-ACC---TCT--A---GCACGCGGTTTGT---------T-C--------TA--TT--------AATTGAT----TTAGGGGGGC--------TATTGCG-GGGGGTCTTTGATCTTCTCG---GCGATCTCCACCGGTCAGTG-CACTGCCAAAATGTGTTTTTTTTTTATTGCGGCGCTGCAAAAA--------G-----------TT--AATT
droBip1 scf7180000396712:2297810-2298073 + TAATGGCTGATATTAACGACTCCAACGGAAACTACGACGATTGCGACGAGGTGAGTA---CCATAAT--TG--C--A-ATTATT-TT--GTAAGTTATTTTTGCTGA----------TA---------CGTGTTTTGCCGACGCCGACAGATTTTGC-ACC----TT--A---GCACGCGGTTAGT---------T-CTATTT---AT--T-------------GAT----TATAGGGGTA--------TATGGGGAGGGGGTCTTTGATCTTTCTG---GCAATCCCCACCGGTCAGTGATCTGCCAAAAATGGTTTT---GCGCCT--TTGCAAA-----AA--AG----GTTAAT---T--AC--AAAA
dp5 2:16926615-16926871 - dps_596 CTATGGCAGACTTAAACGACTCCAACGGCAACTACGACGACAACGATGAGGTAAGCG---CAGGATT--GC--G--AAG-TT--------------------TTTATCGTG-----------------AGC-AAATGTCAATGCCGACAATGC--AC-TGCAAATTT--T---GCACGCGGTTTTT---------T-C--------GG--AGAATTTAATGT--GAA----TACGTAC--GTGTGTG-TGCGTGT--ATGTGGCTTCGATCCTCGGG----CCTTTGAGGCCGGCCAGTGACACGGCATAAGTTCAAAG---CCTTC-------GAA-----AG--AAGCAACGAATT---T--GC--AAAA
droWil2 scf2_1100000004943:6570432-6570498 - AAATGGCGGATATCAACGATTCCAATGGAAACTACGATGACAACGATGAGGTAAGTT---AAAGAACT--A--------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13047:9259161-9259263 - --ATGGCTGATTTAAATGACTCCAATGGAAACTACGACGACAATGATGAGGTGAGCG---AAATGTG--TG--T--A-A------------------TATATGTAGTTGCATG---------------TAC-AAGTGCCGACGCCGACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:31374697-31374904 + -AATGGCTGATTTAAACGATTCAAATGGAAACTACGACGACAATGATGAGGTGAGCG---TAATGTT--TA--T--T-A----------------------TCAATTCGCATG---------------CAAAAAATGCCGATGCCGACACAT-T-GA-AGAA--ATA--T---GAAAATGGCATTT-CGAAT---TTT----GC--TG--TG-------------------TATGTGC-----------ATTTGC--AACGTAATATTCTCTATATT----CGAATTGAAGAAGG-----------CTAAA-------------------TAAAGA------AA--------------------AC--AAAT
droGri2 scaffold_14906:3986739-3986940 + CAATGGCTGATCTAAACGATTCCAATGGAAATTACGACGATAACGACGAGGTGAGCG---TAATAAT--ATT-G--T-G-TT-------------T------ATTTTCGCATA---------------ACTAAAATGCCGACGCCGACATAT-T-GAAAGTTAACGAATA-----AATTAATATTT--------TT-T----TTTTACCGTA------AATGTTGATTAACTACGTT----------------------------T-------------------------CGATTGATGCTACCAATTTAACTTGAT-------------------------------------------A--TA--ATAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GAATGGCGGAACAGAACGATTCCAACGGAAACTACGACGATGGTGAAGAGGTGAGTT---GCAGAATG----------------------------------AACATCGCGCGTGAAAG---------TGTAAAATGTTGACGCCGACAATATTCGC-GTATAATAT--ACATTCAAGCGGTTTTT------TTTT-T--------AC--CG------AAAGTTAAG----TACGTGT-----------AATTAT--GCGGTACATCGATCCCTGTG----CGAATTTAACCAGA-----------TTCAAGTTTATTG---ACCTCTTTTGGCGAG-----AA--ATA-TACGTAAT---T--TC--CGATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................TTCCAACGGAAACTACGACGATGGTGA......................................................................................................................................................................................................................................................................................................................................2714.00400000020010100000
....................TCCAACGGAAACTACGACGATGGTGA......................................................................................................................................................................................................................................................................................................................................2614.00400000040000000000
..........................GGAAACTACGACGATGGTGAAGAGA.................................................................................................................................................................................................................................................................................................................................2512.00200000011000000000
.....................CCAACGGAAACTACGACGATGGTGA......................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
....................TCCAACGGAAACTACGACGATGGT........................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
.............................................AAGAGGTGAGTT---GCAGAATG----------------------------------G.............................................................................................................................................................................................................................................................................2111.00100000000000001000
......................CAACGGAAACTACGACGATGG.........................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
..............AACGATTCCAACGGAAACT...................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
..............AACGATTCCAACGGAAA.....................................................................................................................................................................................................................................................................................................................................................1711.00100000000100000000
.....................CCAACGGAAACTACGACGATGGTGAA.....................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
....................TCCAACGGAAACTACGACGATGGTGAAG....................................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
..ATGGCGGAACAGAACGATTCCA............................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
............................................................................................................................................................................................................................................................TAT--GCGGTACATCGATCCCTGTG----CGA........................................................................................2611.00100000000010000000
...................TTCCAACGGAAACTACGACGATGGTGAA.....................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................TTTTGGCGAG-----AA--ATA-TACGTAAT---T--........2411.00100000000100000000
....................TCCAACGGAAACTACGACGATGGTGAA.....................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
...............ACGATTCCAACGGAAACTACGACGAAA..........................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
...................................................................................................................................................................................................................................................................................................................................CCTCTTTTGGCGAG-----A.............................1550.20100000000001000000
droSec2
GAATGGCGGAACAAAACGATTCCAACGGAAACTACGACGATGGTGAAGAGGTGAGTT---GCAGAATG----------------------------------ACCATCGCGCGTGAAAG---------TGTAAAATGTTGACGCCGACAATATTCGC-GTATAATAT--ACATTCAAGCGGTTTTT------TTTT-T----TTTTAC--CA------AAAGTTAAG----TACGTGG-----------AATTAT--GCGGGACATCGATCCCTGTG----CGAATTTAACCAGC-----------TTCAAGTTTATTG---ACCTCTTTTGGCGAG-----AA--ATA-TACGTAAT---T--TC--CGATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................ACTACGACGATGGTGAAGA...................................................................................................................................................................................................................................................................................................................................1911.0010010
....GGCGGAACAAAACGATTCCAACGGA.......................................................................................................................................................................................................................................................................................................................................................2511.0011000
..................................................................................................................................................................................................................CA------AAAGTTAAG----TACGTGG-----------AATTAT--...................................................................................................................2411.0011000
......................CAACGGAAACTACGACGATGGTGAAGAG..................................................................................................................................................................................................................................................................................................................................2811.0010100
dm3
GAATGGCGGAACAAAACGATTCCAACGGAAACTACGACGATGGTGAAGAGGTGAGTT---GCAGAATG-AC--C--A-ATTGCT-GTTTGTAAATC-----GTTCATCGCGCGTGAAAG---------TGCAAAATGTCGACGCCGACAATATTCGT-GTATAATAT--ACATTCACGCCGCTTTT---------T-T--------AC--CG-------------------------------------AATTAT--GGGGGCCATCGATCCCTGTG----CGAATTTAGCCAGC-----------TAAAAGTTTATCG---ACCTCTTTTGGCGAG-----AA--ATA-TAAGCAAT---T--TC--CGATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................TACGACGATGGTGAAGAG..................................................................................................................................................................................................................................................................................................................................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
............AAAACGATTCCAACGGAAACT...................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.................GATTCCAACGGAAACTACGACGATGGT........................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000100000000000000000000000000000000000000000000000000010000000000000000000000000000
....................TCCAACGGAAACTACGACGATGGTGAA.....................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AACGGAAACTACGACGATGGTGAAG....................................................................................................................................................................................................................................................................................................................................2512.0020000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ATTCCAACGGAAACTACGACGA............................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AACGATTCCAACGGAAACTACGAC..............................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GAATGGCGGAACAAAACGATTCCAACGGA.......................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................ACGATGGTGAAGAGGTGAGTT---GC......................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................C-----GTTCATCGCGCGTGAAAG---------TG..................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATGGCGGAACAAAACGATT...............................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AAAACGATTCCAACGGAAAC....................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000
......CGGAACAAAACGATTCCAACGGAAACT...................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CGATGGTGAAGAGGTGAGTT---GCAGAAT.................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CTACGACGATGGTGAAGAG..................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GGAACAAAACGATTCCAA...........................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................GTGAAAG---------TGCAAAATGTCGAC......................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................CGATTCCAACGGAAACTACGA...............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATGGCGGAACAAAACGATTCCAACGGA.......................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AACGGAAACTACGACGATGGT........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TGTAAATC-----GTTCATCGCGCGT..................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.AATGGCGGAACAAAACGA.................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................TCCAACGGAAACTACGACG.............................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................TTGCT-GTTTGTAAATC-----GTTCA..........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..............................................................AGAATG-AC--C--A-ATTGCT-GTT............................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
......CGGAACAAAACGATTCCAACGGAAA.....................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AACGGAAACTACGACGATG..........................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..............................................................AGAATG-AC--C--A-ATTGCT-GTTTG..........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...................TTCCAACGGAAACTACGACGATGGTGA......................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AACTACGACGATGGTGAAGAGA.................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ACGATTCCAACGGAAACTACG................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ATTCCAACGGAAACTACGACGATGGT........................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................AAGAGGTGAGTT---GCAGAA..................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................TCCAACGGAAACTACGACGATGGTGA......................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ACGACGATGGTGAAGAGG.................................................................................................................................................................................................................................................................................................................................1821.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.........AACAAAACGATTCCAACGGAAA.....................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AAACGATTCCAACGGAAACT...................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................CCAACGGAAACTACGACGATGGT........................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATGGCGGAACAAAACGATTCCAA...........................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CGGAACAAAACGATTCCAACGGAAACTAC.................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................G---------TGCAAAATGTCGACGCC...................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
.............................................................CAGAATG-AC--C--A-ATTGCT-G..............................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
............AAAACGATTCCAACGGAAACTACGA...............................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................CGCGCGTGAAAG---------TGCAAAATGTCGACGC....................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
......CGGAACAAAACGATTCCAACG.........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AACTACGACGATGGTGAA.....................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GAATGGCGGAACAAAACGATTCCAACG.........................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AAAACGATTCCAACGGAAACTACGACG.............................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CAACGGAAACTACGACGATGGTGA......................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CGGAAACTACGACGATGGTGA......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............AAAACGATTCCAACGGAAACTC..................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CGGAACAAAACGATTCCAACGGA.......................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TAAATC-----GTTCATCGCGCGTG.................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GATTCCAACGGAAACTACGAC..............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ACGACGATGGTGAAGAGA.................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................................................................................................................................................................................................................................................................................GTTTATCG---ACCTCTTAGA........................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GAATGGCGGATCTGAACGACTCCAACGGAAACTACGACGATGGTGACGAGGTGAGTG---GCAAAATG-TT--C--A-ATTACT-TC------------TTGGCCAGTGCATAGAAAAG---------TGCAAAATGTCGACGCCGACAATTCTTGC-ACATGCTAT--A---TCATGTGGCTTTAGCGGCTTTTG-C--------CC--CG------AAAGTAAAG----TACGTGG-----------AATTGT--GAAGGCCATCGATCCCTGTG----TAAACT-----------TGACAAGATACAAGTATATTG---ACCCCTTCTTGCGAA-----AA--ATA-TATGTAAT---T--GC--CGATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............TGAACGACTCCAACGGAAACTACGACGA............................................................................................................................................................................................................................................................................................................................................2815.0050000005
...TGGCGGATCTGAACGACTCCAACGGA.......................................................................................................................................................................................................................................................................................................................................................2611.0010000001
.................GACTCCAACGGAAACTACGACGATGGT........................................................................................................................................................................................................................................................................................................................................2711.0010000010
..............AACGACTCCAACGGAAACG...................................................................................................................................................................................................................................................................................................................................................1911.0010001000
......................CAACGGAAACTACGACGATGGT........................................................................................................................................................................................................................................................................................................................................2211.0010000010
.....................CCAACGGAAACTACGACGATGGTGA......................................................................................................................................................................................................................................................................................................................................2511.0011000000
...........CTGAACGACTCCAACGGAAA.....................................................................................................................................................................................................................................................................................................................................................2011.0010000100
droYak3
GAATGGCGGATATTAACGACTCCAACGGAAACTACGACGATGGCGACGAGGTGAGTG---ACAAAATG-TT--C--A-ATTACT-TTT-----------TGTGCCAGCGCGTGGGAAAG---------TGCAAAATGTCGACGCCGACAATTCTTGC-ATATAATAT--A---GCACGCGGCTTTT---------G-C--------CC--CG------AAAGTAAAG----TACGTGG-----------AATTGT--GCAGGCCATCGATCTCTGTG----CGAATTTAACAAGG-----------TACAAGTTTGTTG---ACCCCCTTTTGCGAA-----AA--ATA-TATGTAAT---T--GC--CGATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................TT---------G-C--------CC--CG------AAAGTAAAG----T............................................................................................................................................1811.00100010000000
......................CAACGGAAACTACGACGATGGCGACG....................................................................................................................................................................................................................................................................................................................................2611.00100000010000
...............................CTACGACGATGGCGACGAGGTG...............................................................................................................................................................................................................................................................................................................................2211.00100000010000
.................GACTCCAACGGAAACTACC................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
........GATATTAACGACTCCAACGGAA......................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEug1
TAATGGCGGATCTGAACGATTCCAATGGAAACTACGACGATGGTGACGAGGTGAGTT---TAATGAG--AT--T--A-ATTTCC-A-------------AATGTAATCGCGTGGAAAAG---------TGCAAAATGTCGACGCCGACAATTTTTGC-AGAGAATGT--A---GCACGCGGCTTTT------TTTT-C--------TC--GG------CCAATTAAG----TACGTGG-----------AATTAA--ACAGGTCTTCGGTCTTTATT----CGCTTTCAACCGGTTAATGGCACTAAAAAAGTTTAATA---ACCCTTATCGGGGA------AAACGTA-TGTATAAT---T--ATTACAAASizeHit CountTotal NormTotal
No Reads
droBia1
TAATGGCGGATCTCAACGACTCCAACGGAAACTACGACGATGGTGACGAGGTGAGTT---GTCGAGC--TG--C--G-CTTTCT-GG------------TTCGCCAACGCGTGGGAAAG---------TGCAAATTGTCGACGCCGACAAAT-TCGC-AGGTAACTC--G---GCACGCGGCTTTT---------TTC--------GC--TG-------------------GCTGTGG-----------AATTGT--ACAGGTCTTCGCTCTTTGTC----CGAATTCAACCGGTTATTGACTCGGCGCCGGTTTAATG---CCCCCTTTTTGGGA------AAATATA-CGCATAAT---T--G---TGAGSizeHit CountTotal NormTotal
No Reads
droTak1
TCATGGCGGATCTGAACGACTCCAATGGAAACTACGACGATGGCGACGAGGTGAGTGGTTGTTAAACAACG--C--A-CTTTTT-TC------------TATGTCAACGCGTGGGAAAG---------TGCAAAATGTCGACGCCGACAAAATTTGC-AACG--CTC--A---GCACGCGGCTTTT---------TTC--------GC--TG------GGTGTAAAG----TACT----------------TTAA--GCAGGT---------CTGTC----CGAATTCAACCGGTTATTGACACTGCTTGAGTTAAATGGAGCCCCATTTTGGGGCAAC---AA-TATA-TACATAAT---T--GT--TAAASizeHit CountTotal NormTotal
No Reads
droEle1
GAATGGCGGATCTTAACGACTCTAATGGAAACTACGACGACGGTGACGAGGTGAGTT---ATTTATT--CG--TTGAAA----TTCT------------TTAGCAAACGCACGAGAAAG---------TGCAAAATGTCGACGCCGAAAGAA-TTGC-AAG-AATAT--A---ACACGCGGCTTTT------TTTT-T--------AC--T-------------TAT----GATGTGTACACATTTG-GGATTGT--CTGAGTCTTTGCT-----TG----TGGATTGATCGGGTTAATGACACTGCAAAAGTTTGATG---GCCCTTGTCTCGGA------A-----A-CATGTAATTGAA--TA--AAAASizeHit CountTotal NormTotal
No Reads
droRho1
GAATGGCGGATCTGAACGACTCCAATGGAAACTACGACGATGGTGATGAGGTAAGTT---AATATAT--CG-CG-AAAG----TTCA-----------ATATCCAAACGCGTGGGAAAG---------TGCA-AATGTCGACGCCGACAAAT-TGGC-AATG-AATT--A---ACACGCGGCTTTT---------T-T--------G---------------TACAA----TATGTGTATTCATATGTGTATT---------AAATAGGTCTTTGTT----CGGATTCAGCGGGTTAATGACACTGCAAAAGTTTGATG---GCCCTTTTCTCGCA------A-----A-CATGTAATTGA---TT--AAAASizeHit CountTotal NormTotal
No Reads
droFic1
GAATGGCAGATTTAAACGACTCCAATGGAAACTACGATGATGGCGATGAGGTGAGTT---AACAAAA-----------------------------------------------GAAAC---TATGTATGCAAAATGTCGACGCCGACAAAA-TTGC-A----------------ACGCGGCTTTT---------T-C--------GG--TG------ACAATTGAA----TAGGTGC-----------GATTAA--GTGGACCATTCATCTTTGTT----GGCATTCAGCCGGTTAATGACACCTCACAAGTTTGATG---ACCCTTTTTCGGTG------AATTATG-TTTATAAT----------CAATSizeHit CountTotal NormTotal
No Reads
droKik1
-AATGGCGGATTTGAACGACTCCAATGGAAACTATGACGACTGCGACGAGGTGAGTT---TTGTTTT--TG--T--C-G----------------------GCTTTTCGC--GGGGAGGGGCGGGCGACGGAAAATGTCGACGCCGACAATT-TCGC-ACCGAAATT--A---GCATGCGGCGTTT---------T-C--------TC--TG------ACGG--GAA----TAAGTGC-----------AATTGCC-GGGGGTCTTCGATCTCGATTCGGGC-TCCTCCGGCGGCCAATGACACGGCAAAAGTTGAAGG---CCCTTTTTTCGCCAGAC---AA--ATA-CAATTGATT--TGAGC--GAATSizeHit CountTotal NormTotal
No Reads
droAna3
TAATGGCTGATATAAACGACTCCAACGGAAACTACGACGACTGCGATGAGGTAAGCA---CAATGAT--TC--C--A-ATTATT-TC---TAAATT------ATTTTCGCCAATAAATA---------CGTG-TTCGCCGACGCCGACAGTTTTTGC-ACC---TCT--A---GCACGCGGTTTGT---------T-C--------TA--TT--------AATTGAT----TTAGGGGGGC--------TATTGCG-GGGGGTCTTTGATCTTCTCG---GCGATCTCCACCGGTCAGTG-CACTGCCAAAATGTGTTTTTTTTTTATTGCGGCGCTGCAAAAA--------G-----------TT--AATTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............AACGACTCCAACGGAAACTACGACGACT..........................................................................................................................................................................................................................................................................................................................................2811.001100000
..................ACTCCAACGGAAACTACGA...............................................................................................................................................................................................................................................................................................................................................1911.001010000
.............................AACTACGACGACTGCGATGAG..................................................................................................................................................................................................................................................................................................................................2111.001010000
...................CTCCAACGGAAACTACGACGACTG.........................................................................................................................................................................................................................................................................................................................................2411.001100000
......................CAACGGAAACTACGACGACTGCGAT.....................................................................................................................................................................................................................................................................................................................................2511.001100000
..............AACGACTCCAACGGAAACTACGACGAC...........................................................................................................................................................................................................................................................................................................................................2711.001010000
droBip1
TAATGGCTGATATTAACGACTCCAACGGAAACTACGACGATTGCGACGAGGTGAGTA---CCATAAT--TG--C--A-ATTATT-TT--GTAAGTTATTTTTGCTGA----------TA---------CGTGTTTTGCCGACGCCGACAGATTTTGC-ACC----TT--A---GCACGCGGTTAGT---------T-CTATTT---AT--T-------------GAT----TATAGGGGTA--------TATGGGGAGGGGGTCTTTGATCTTTCTG---GCAATCCCCACCGGTCAGTGATCTGCCAAAAATGGTTTT---GCGCCT--TTGCAAA-----AA--AG----GTTAAT---T--AC--AAAASizeHit CountTotal NormTotal
No Reads
dp5
CTATGGCAGACTTAAACGACTCCAACGGCAACTACGACGACAACGATGAGGTAAGCG---CAGGATT--GC--G--AAG-TT--------------------TTTATCGTG-----------------AGC-AAATGTCAATGCCGACAATGC--AC-TGCAAATTT--T---GCACGCGGTTTTT---------T-C--------GG--AGAATTTAATGT--GAA----TACGTAC--GTGTGTG-TGCGTGT--ATGTGGCTTCGATCCTCGGG----CCTTTGAGGCCGGCCAGTGACACGGCATAAGTTCAAAG---CCTTC-------GAA-----AG--AAGCAACGAATT---T--GC--AAAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................T---------T-C--------GG--AGAATTTAATGT--GAA----.............................................................................................................................................2012.0020000000200
...................................................................................................................................................................................................................................................TGTG-TGCGTGT--ATGTGGCTTT.........................................................................................................2111.0010000001000
.......AGACTTAAACGACTCCAACGGCAA.....................................................................................................................................................................................................................................................................................................................................................2411.0010000000001
.........ACTTAAACGACTCCAACGGCA......................................................................................................................................................................................................................................................................................................................................................2111.0010000010000
.......AGACTTAAACGACTCCAACGG........................................................................................................................................................................................................................................................................................................................................................2111.0010000000001
.....GCAGACTTAAACGACTCCAACGGCAACT...................................................................................................................................................................................................................................................................................................................................................2811.0010000000001
..............AACGACTCCAACGGCAACTACGAC..............................................................................................................................................................................................................................................................................................................................................2411.0010001000000
CTATGGCAGACTTAAACGACTCCAACGGC.......................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
................................TACGACGACAACGATGAGC.................................................................................................................................................................................................................................................................................................................................1920.5010000100000
droWil2
AAATGGCGGATATCAACGATTCCAATGGAAACTACGATGACAACGATGAGGTAAGTT---AAAGAACT--A--------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................CTACGATGACAACGATGAGCA................................................................................................................................................................................................................................................................................................................................2113.00300210
.............................AACTACGATGACAACGATGAGC.................................................................................................................................................................................................................................................................................................................................2212.00200020
......................CAATGGAAACTACGATGACA..........................................................................................................................................................................................................................................................................................................................................2011.00101000
..............................ACTACGATGACAACGATGAGCA................................................................................................................................................................................................................................................................................................................................2211.00100100
...........................GAAACTACGATGACAACGATGAGCAG...............................................................................................................................................................................................................................................................................................................................2611.00100001
..................ATTCCAATGGAAACTACGATGAC...........................................................................................................................................................................................................................................................................................................................................2311.00100010
........GATATCAACGATTCCAATGGAAACTA..................................................................................................................................................................................................................................................................................................................................................2611.00101000
..........TATCAACGATTCCAATGGAAACTACG................................................................................................................................................................................................................................................................................................................................................2611.00101000
.....................CCAATGGAAACTACGATGACAACGATGA...................................................................................................................................................................................................................................................................................................................................2811.00100010
...............................CTACGATGACAACGATGAGC.................................................................................................................................................................................................................................................................................................................................2011.00100010
................CGATTCCAATGGAAACTACGATGACAAC........................................................................................................................................................................................................................................................................................................................................2811.00101000
.............................AACTACGATGACAACGATGAGCA................................................................................................................................................................................................................................................................................................................................2311.00100010
..........................GGAAACTACGATGACAACGATGAGCA................................................................................................................................................................................................................................................................................................................................2611.00100100
.............................AACTACGATGACAACGATG....................................................................................................................................................................................................................................................................................................................................1911.00100001
droVir3
--ATGGCTGATTTAAATGACTCCAATGGAAACTACGACGACAATGATGAGGTGAGCG---AAATGTG--TG--T--A-A------------------TATATGTAGTTGCATG---------------TAC-AAGTGCCGACGCCGACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................TCCAATGGAAACTACGACGACAATGA......................................................................................................................................................................................................................................................................................................................................2612.002000000000000000000000000000110000000000000000000000000000000000
.......................AATGGAAACTACGACGACA..........................................................................................................................................................................................................................................................................................................................................1912.002000000000200000000000000000000000000000000000000000000000000000
...............ATGACTCCAATGGAAACTACGACGAC...........................................................................................................................................................................................................................................................................................................................................2612.002000000000000000000000000000000000000000000000000000000000000002
.............................AACTACGACGACAATGATGAGC.................................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
.......................AATGGAAACTACGACGACAATGATG....................................................................................................................................................................................................................................................................................................................................2511.001000000000001000000000000000000000000000000000000000000000000000
.............................AACTACGACGACAATGATGA...................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..........................GGAAACTACGACGACAATGATGAG..................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
....................TCCAATGGAAACTACGACGA............................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000100000000000000000000000000000000000000000
....GGCTGATTTAAATGACTC..............................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000100000000000000000000000000
...........................GAAACTACGACGACAATGATGAGCA................................................................................................................................................................................................................................................................................................................................2511.001000000001000000000000000000000000000000000000000000000000000000
...............................CTACGACGACAATGATGAG..................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
.....................CCAATGGAAACTACGACGACAATGA......................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
...................CTCCAATGGAAACTACGACGACAAT........................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
................................................AGGTGAGCG---AAATGTG--TG--...........................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000100
.........................................AATGATGAGGTGAGCG---AAAT....................................................................................................................................................................................................................................................................................................................2011.001000000001000000000000000000000000000000000000000000000000000000
..........TTTAAATGACTCCAATGGAAACTACGAC..............................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000010000000000000000000000000000000000
...........TTAAATGACTCCAATGGAA......................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000001000000000000000000000000000
.................................ACGACGACAATGATGAGC.................................................................................................................................................................................................................................................................................................................................1880.252000000000000000000000000000000000010000000000000000000100000000
droMoj3
-AATGGCTGATTTAAACGATTCAAATGGAAACTACGACGACAATGATGAGGTGAGCG---TAATGTT--TA--T--T-A----------------------TCAATTCGCATG---------------CAAAAAATGCCGATGCCGACACAT-T-GA-AGAA--ATA--T---GAAAATGGCATTT-CGAAT---TTT----GC--TG--TG-------------------TATGTGC-----------ATTTGC--AACGTAATATTCTCTATATT----CGAATTGAAGAAGG-----------CTAAA-------------------TAAAGA------AA--------------------AC--AAATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................GGAAACTACGACGACAATGATGA...................................................................................................................................................................................................................................................................................................................................2312.002200000
..........................GGAAACTACGACGACAATGATGAG..................................................................................................................................................................................................................................................................................................................................2411.001100000
..........................GGAAACTACGACGACAATGATG....................................................................................................................................................................................................................................................................................................................................2211.001100000
.............AAACGATTCAAATGGAAACTA..................................................................................................................................................................................................................................................................................................................................................2111.001100000
.................GATTCAAATGGAAACTACGAC..............................................................................................................................................................................................................................................................................................................................................2111.001100000
.......TGATTTAAACGATTCAAATGGA.......................................................................................................................................................................................................................................................................................................................................................2211.001100000
..................ATTCAAATGGAAACTACGACGA............................................................................................................................................................................................................................................................................................................................................2211.001100000
................................TACGACGACAATGATGAGCA................................................................................................................................................................................................................................................................................................................................2030.331100000
droGri2
CAATGGCTGATCTAAACGATTCCAATGGAAATTACGACGATAACGACGAGGTGAGCG---TAATAAT--ATT-G--T-G-TT-------------T------ATTTTCGCATA---------------ACTAAAATGCCGACGCCGACATAT-T-GAAAGTTAACGAATA-----AATTAATATTT--------TT-T----TTTTACCGTA------AATGTTGATTAACTACGTT----------------------------T-------------------------CGATTGATGCTACCAATTTAACTTGAT-------------------------------------------A--TA--ATATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 12:19 PM