ID:

dsi_10990

 Coordinate:

3r:6994736-6994885 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.4 -15.2 -15.0

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

TCTAACACACACTCACACACCCAAGAAACACACACACACACACATACAGAGTTCCGCCCACACGCCCTAAAAATCGACAAAAAGTGCATTTGCAGTCGGAAAACCTGCAAGAATATATTACAAATTTTTGAAAAAAATTTAAAAAAAAATTAAATCTGAAATTAAAGTGCTTCAATCAGTGCCTTGCAAAACAAACCTAGAATAAAATACCCCCAGATAAAATATCCAGATCATTACTGATCAGTGAAGA
**************************************************.......................(((((......(((....))))))))......((((((.............((((((((.....)))))))).....................(((((......)))))))))))............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 GSM343915
embryo
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
.......................................................................................ATTTGCAGTCGGAAAACC................................................................................................................................................. 18 0 1 2.00 2 2 0 0 0
.....................................................................................GCATTTGCAGTCGGAAAACCTGC.............................................................................................................................................. 23 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................AATTAGAGTGCTTAAAGCAGTG..................................................................... 22 3 2 0.50 1 0 1 0 0
...............................................................................................................................................................AATTAGAGTGCTTAAATCA........................................................................ 19 2 8 0.13 1 0 0 1 0
...............................................................................................TCGGACAACCTGGTAGAAT........................................................................................................................................ 19 3 14 0.07 1 0 0 0 1

Anti-sense strand reads

AGATTGTGTGTGAGTGTGTGGGTTCTTTGTGTGTGTGTGTGTGTATGTCTCAAGGCGGGTGTGCGGGATTTTTAGCTGTTTTTCACGTAAACGTCAGCCTTTTGGACGTTCTTATATAATGTTTAAAAACTTTTTTTAAATTTTTTTTTAATTTAGACTTTAATTTCACGAAGTTAGTCACGGAACGTTTTGTTTGGATCTTATTTTATGGGGGTCTATTTTATAGGTCTAGTAATGACTAGTCACTTCT
**************************************************.......................(((((......(((....))))))))......((((((.............((((((((.....)))))))).....................(((((......)))))))))))............************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
.................................................................GGATTTTTAGCTGTT.......................................................................................................................................................................... 15 0 5 0.20 1 1 0 0
.......................TTTTTGTGTGTGTGTATGTGTATGTC......................................................................................................................................................................................................... 26 2 5 0.20 1 0 1 0
...........................................................TGTGCTGGCTTTTTAGC.............................................................................................................................................................................. 17 2 18 0.06 1 1 0 0
.....................................................GGGAGGTGTGCGGGAT..................................................................................................................................................................................... 16 2 20 0.05 1 0 0 1
...............................TGTGTGTGTGTGTATGTCT........................................................................................................................................................................................................ 19 0 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:6994686-6994935 + dsi_10990 TCTAA-CACAC--ACT----CACACA----CCCAAGAAA--CA--------CA----------------CA--------------------------------------------------------CACAC--------------ACA------------CATACAGAG---TTCCGCC-CACACGCCCTA---------------AA--------------------------------------------------------------------------------------------------------------------------------------------AATC--GACAAAAAGTGC-----ATTTGCAGTCG--------------------------------------------GA-A--AACCTGCAAGAATA-----------------------------------------------------------------------------------------TATT--A--------CAA----ATTTTTGAAAAAAATTTAAAAAAAAATTAAATCTGAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAGTGC-TTCA------AT--CAGTGCCTTGCAAA----AC------AAACCTAGAAT-------------------------------AAAATACCCCC--AGATA------------AAATATCCAGATCATTACT-GATCAGTGAA--GA----------------
droSec2 scaffold_5:5622501-5622750 + TCTAA-CACAC--ACT----CACACA----CCCAAGAAA--CA--------CA----------------CA--------------------------------------------------------CACAC--------------ACA------------CATACAGAG---TTCCGCC-CACACGCCCTA---------------AA--------------------------------------------------------------------------------------------------------------------------------------------AATC--GACAAAAAGTGC-----ATTTGCAGTCG--------------------------------------------GA-A--AACCTGCAAGAATA-----------------------------------------------------------------------------------------TATT--A--------AAA----ATTTTTGATAAAAATT-AAAAAAAAATTAAATCTGAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAGTGC-TTCA------AT--CAGTGCCTTGCAAA----AC------AAACCTAAAAT-------------------------------AAAATACCCCC-CAGATA------------AAATATCTAGATCATTACT-GATCAGTGAA--GA----------------
dm3 chr3R:14272615-14272868 - TCTAA-CACAC--ACT----CACACA----TCCAAGAAA--CA--------CA----------------CA--------------------------------------------------------CACAC--------------ACA----------CATATACAGAG---TTCCGCC-CACACGCCCTA---------------AAA-------------------------------------------------------------------------------------------------------------------------------------------AATC--GACAAAAAGTGC-----ATTTGCAGTCG--------------------------------------------AA-A--TACCTGCAAGAATA-----------------------------------------------------------------------------------------TATT--A--------AAA----ATTTTTGATAAAAATTAAAAAAATAAATAAATCTGAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAGTGC-TTCA------AT--CAGTGCCTTGCAAA----AT------AAACCTAGAAT-------------------------------AAAATACCCCC-CCCCCC------------CCTTATACAGATCGCTACT-GATCAGTGAA--GA----------------
droEre2 scaffold_4770:7365925-7366134 + TCTAA-CACAC--ACT----CACACA----CCCAAGAAA--CA--------CA----------------CA--------------------------------------------------------CACAT--------------ACA------------------GAG---CTCCGCC-CACACGCCCTA---------------ATA-------------------------------------------------------------------------------------------------------------------------------------------AATC--GAGAAAAAGTGC-----ATTTGCAGTCG--------------------------------------------GA-A--AACCTGCAAGAATA-----------------------------------------------------------------------------------------TATT--A--------CAA----ATTTCTGATAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA--------AAGTGC-TTCA------AT--CAGTGCCTTGAAAA----AT------AAACCTAGA-T-------------------------------TAAATACCCCC-CAC---------------------CCAGATCGTTACT-GATCAGTGAA--GA----------------
droYak3 3R:2905614-2905853 - TCTAA-CACAC--ACT----AACACA----CCCAAGAAA--CA--------CA----------------CA--------------------------------------------------------CGCAC--------------ACA------------------GAG---CTCCGCC-CACACGCCCTA---------------AAA-------------------------------------------------------------------------------------------------------------------------------------------AATC--GACAAAAAGTGC-----ATTTGCAGTCG--------------------------------------------GA-A--AACCTGCAAGAATA-----------------------------------------------------------------------------------------TATT--A--------CAA----ATTTTTGATAAAA-----AAAAAGAGTTAAATCTATAATTTAAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAAGTGC-TTCA------AT--CAGTGCCTTGAAAA----AT------AAACCTAGAAT-------------------------------AAAATACCCCT-TAC---------------------CCAGATCATTACT-GATCAATGAA--GA----------------
droEug1 scf7180000409802:1767721-1767975 + TCTAA-CACAC--ATT----CACACA----CCCAAGAAAACTA--------CA----------------CA--------------------------------------------------------CACAT--------------ACA------------AAAACACAG---TTCCGCC-TACACGCCCTA---------------AAA-------------------------AAATAG------C---------------AACCA------------------------------------------------------------------------------AT-AATTGCAAC-AAAAGTGC-----TTTTGCAGTCG--------------------------------------------GA-A--AAACTGCAATAAAA-----------------------------------------------------------------------------------------AATT--A--------AAA----ATTTTTAATA------------------------------------------AGAAAAT----------------------------------------TT------------------------------------------------------------------------------------------------------TT---------------------------------------AAAA-------ATTAAGTGC-TAAA------AT--CAGTGCCTTGAAAA----AT-AT-ACATACTTAATAT-------------------------------AAATTACCCCT--AA---------------------ACAGATCAAAATT-GATCAGTGAATTGAA-------------AG
droBia1 scf7180000299102:1684448-1684703 + TCTAA-CACAC--ACT----CACACA----CCCAAGAAA--CA--------CA----------------CA--------------------------------------------------------CACAC--------------ACA------------------TAG---TTCCGCC-CACACGCCCAC---------------T--------------------CCAAGAAAGAGAG-------------------CCCAAAAA---------------------------------------------------------------------------------AATC----------GTGC-----ATTTGCAGTCG--------------------------------------------GGAA--AAACTGCAAAAAAA-------A---------------------------------------------------------------------------------TTATTTA--------AAAATATATTTTTAATA---ATC-----------------A------------------AAAAATTA--AA------------------------------G---------------------------------------------------------------------------------------------------------------T---------------------------------------------------TTGTGCCTAAA------AT--CAGTGCCTTGAAAATAAAAT-AC---ATACTTCAAAT-------------------------------TAAACACCCCT-C-C--A----AC------CCTCA-AAAGATCCGTATC-GATCAGTGAA--GAA---------------
droTak1 scf7180000415878:553475-553718 + TCTAA-CACAC--ACT----CACACA----CCCAAGAAA--CA--------CA----------------CA--------------------------------------------------------CACAC--------------ACA------------------TAG---TTCCGCC-CACACGCCCTC---------------AAAAATAT----ATGAAAAACC------------------C---------------AACAA------------------------------------------------------------------------------AT-AATTGCAAC-TAAAGTGC-----TTTTGCAGTCG--------------------------------------------GA-A--AAACTGCATAGAAA-------A---------------------------------------------------------------------------------TA----A--------AAA----AATATTA------A------------------------------------TTAAAAAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATA--------AAGTGT-TAAA------AT--CAGTGCCTTGAAAA----AT-AT---ATACTTAAAAT-------------------------------TCAATACCCCC-TCC---------------------CCAGATCATTGAC-GATCAGTGAA--GAG---------------
droEle1 scf7180000491008:1974113-1974356 + TCTAA-CACACACACT----CACACA----CCCAGGAAA--CA--------GT----------------CA--------------------------------------------------------CACAC--------------ACA------------------CAG---TTCCGCC-AACACGCCCAC---------------AAA---------------AACC------------------C---------------AACAG------------------------------------------------------------------------------AT-AGTTGCAGC-AAAAGTGC-----ATTGGCAATCA--------------------------------------------A-----AAATTGCAATAAAA-----------------------------------------------------AA-ATGTTTTGAAAT---------------------------------------------TT-------------------------------------CAAATCAAATTAGAAAATA--AA-----------------------------------T----------------------------------------------------------------------------------------------------------T--------------------------------------TAAAA--------AAGTGC-TAGA------AT--CAGTGCCTTGAAAA----A--------AACTTAAAAT-------------------------------CAATTACCCCT-CCC---------------------CCAGATCATTACC-GATCAGTGAA--GAA---------------
droRho1 scf7180000777997:4681-4922 - TCTAA-CACAC--ACACACTCACACA----CCCAGGAAA--CA--------AA----------------AA--------------------------------------------------------CACAC--------------AC--------------------AG---TTCCGCC-CACACGCCCAC---------------AAAT---------------ACC------------------C---------------AACAG------------------------------------------------------------------------------AT-AGTTGCAAC-AAAAGTGC-----ATTTGCAGTCA--------------------------------------------AAAA--AAACTGCAAAAAAA-----------------------------------------------------------------------------------------TTTTCCA--------AAAAT--AATTTTAAAAAA----------------------------------------------------------------------------------GT---T-------------------------------------------------------------------------------------------------------TT---------------------------------------AAAAAA--------AAGTGA-TTTA------AT--CAGTGCCTTGAAAA----AA--T---ATACTTAAAAT-------------------------------TAAATACCCCCTCCC---------------------CCAGATCATTATC-GATCAGTGAA--GTA---------------
droFic1 scf7180000453800:750541-750789 - TCTAA-CACAC--ACT----CACACA----CCCAAGAAC--CA--------CA----------------CA--------------------------------------------------------CACAC--------------AC--------------------AG---TCCCGCC-CACA-GC------------------------------------AAACC------------------C---------------AACGG------------------------------------------------------------------------------AT-TATTGCAAC-AAAAGTGC-----ATTTGCAGTCG--------------------------------------------GT-T--AAACTGCAAAATC---------------------------------------------------AATACTTAGTTTTAGAAATTCAAA--------------------------TAAAAAA----ATATTTGAAAAAA---------------------------------------------------------------------------------GT---TT------------------------------------------------------------------------------------------------------TT---------------------------------------CAAAAT--------AAGTGC-TAAA------AT--CAGTGCCTTGAAAA----AT-AT---ATACTTAAATT------------------------------TAAAATACCCCT-C-C---------------------CCAGATCGTTACT-GATCAGTGAA--GA----------------
droKik1 scf7180000302392:131058-131416 + TCTAAACTCAC--ACA----TACTCT--GAC-----ACA--CACTCACGCACACCCACGCCCACACACGCA--------------------------------------------------------CACAC--------------CCT------------T------GG---AT----------CGGG---------------------------------------C------------------C---------------AGTAA------------------------------------------------------------------------------AT-AATTGCAAC-AAAAGTGCGGCGAAATTGCAGTCG--------------------------------------------GAAA--AATCTGCAAGAAAA------------------------------------------------------------------------------------------ATC--A--------AAA----AATTGAAACA------------------------------------------ACAAAAT----------------------------------------TTTTCAACTAAAAAGTCTAGTTTGGCAAAATTACAGAAATTTTGAAATACAAATTTTGCCAAATAGGAATCATGAAATAAATAATAATTAATCATAAAAAATTTTTATTA-----------------------------------CAAAAA--------TAGTGC-TGAA------AT--CAGTGCCTTAAAAA----AG----------CCA---T-------------------------------TAAATAAA----T----ACATAATATTTTAACGCA-GCAGATCACCAAT-GATCAGTGCTGAGA----------------
droAna3 scaffold_13340:9832373-9832594 + TCTAA-CACAC--ACC-A--CACACACAAACACCAGCAG--CA--------CA----------------CA--------------------------------------------------------CAC--------------------------------------AACACCATCGCAACATACGCGCCA---------------AAA------------------------AA-----------A---------------AGAAG------------------------------------------------------------------------------GA-AATTGTAAC-GAAAGTGCTAAACAACTGCAGTAA--------------------------------------------AAAAA-AGTCTGCAAAAAAAT-----AA---------------------------------------------------------------------------------ATACCCA--------CAA-----------------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGTGT-TAAA------AG--TAGTGCCTTAAAAA----AT------AATTT-----------------------------------------TATCCCT-A-C--A------------ACATA-TCAGATCAATATTGGATAAGTGAA--GA----------------
droBip1 scf7180000396691:2533654-2533868 + TCTAA-CACAC--ACT----CACACACAAACCCCAG-----CA--------CA----------------CA--------------------------------------------------------CACCA--------------C---------------------CA---CACCGCAACATACGCGCCA---------------AAA------------------------AA-----------------------------AAG------------------------------------------------------------------------------GA-AATTGTAAC-GAAAGTGCTACACCACTGCAGTAA--------------------------------------------AAAAAGAATCTGCAAAAAAT------AA---------------------------------------------------------------------------------TTACCCA--------AAA-----------------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGTGC-TAAA------AC--TAGTGCCTTAAAAA----AT------AA--------T-------------------------------TGAATCCCCAC------A------------ACATA-TCAGATCAATATTGGATAAGTGAA--GA----------------
dp5 2:11922230-11922598 + TCTAAGCACAC--ACT----CACACA--AAC-----TTA--CACGCGCGCACACACACACACACACGCACA------------A-----------------CACACCGTA----------------------CTCGGTGCA---------------------------------TACTCC-CACACGCACAC---------------AAATACGCGCGCGCGAAAAACC------------------C---------------AACCGCTTGGGAAAACACGGAAAAACAAAAACTTGGATACTTTTCAAACCAAAATATACACAACAAAAAAGTTGAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAT-------------TT-------------------------------------CAAATTTCATAAGAAATTG--CA------------------------------G---------------------------------------------------------------------------------------------------------------TTCCCCCCCCTCCACCAAAAAAAAAAAAAACTGCTCGG-CAAAA--------AAGTGC-TAAAATCGAAAT--CTGTGCCTTAAAAT----A----------CCCAAAATATTTTGCCCATAAAAATACAAAATCAAATCA--------------------AAATTCTGT-------AGCGATCACTGTG-GATCGTTG-A--GA----------------
droPer2 scaffold_0:8584309-8584671 - TCTAAGCACAC--ACT----CACACA--AAC-----TTA--CACGCGCACACACACACACACACA----CA------------A-----------------CACACCGTA----------------------CTCGGTGCA---------------------------------TACTCC-CACACGCACAC---------------AAATACGCGCGCGCGAAAAACC------------------C---------------AACCGCTGGGGAAAACACGGAAAAACAAAATCTTGGATACTTTTCAAACCAAAATATACACAACAAAAAAGTTGAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAT-------------TT-------------------------------------AAATTTTCATAAGAAATTG--CA------------------------------G---------------------------------------------------------------------------------------------------------------TTCCCCCCCCTCCAGCAAAAAA--AAAAAACTGCTCGG-CGAAA--------AAGTGC-TAAAATCGAAAT--CTGTGCCTTAAAAT----A----------CCCAAAATATTTTGCCCATAAAAATACAAAATCAAATCA--------------------AAATTCTGT-------AGCGATCACTGTG-GATCGTTG-A--GA----------------
droWil2 scf2_1100000004943:10759022-10759325 + TCTAA-C-CAC--ACT----TACATA----TACAT-ATA--TACA------TA----------------CAAATATATATATATATAT--------------------------ATATATATACGCACAC--AACAATACACAC--TCC------------------TTC---TCCCTCT-CACACGCACAC---------------GCA--------TGCT------------------------------GGGATT-ATT----------------------------------------------ACATCAAAACCCTTCTAAGAAAGAAGAAGAATAAATAAAATATTA--TACAACAAATCT-----TTTTGCAGTTTTTATGCAAAAAACATAAATCAAGTGCCGCCTACAAGTGCCTGAAAAAAT-AAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACA-AAAAA-------------------------------AAAAAATCATT-TAT---------------------ATAAATCTATGAA-AATCAGTGCT--AAATAATAATTAATTTAA
droVir3 scaffold_12855:4614645-4614966 + TCTAAGCACGCACACT----TACACT--AGC-----ACA--CACACACACACAC----------A----CAAACA--------ACTATACGCACGTATGCACACATCGTATAAAATATAAA------CACGC-ACATTACACACACACA--CACACACACACACACACAC---ATACGCA-CATAC---------------------------AT----GT-------------------------------GATGAT-TCCCAATAA------------------------------------------------------------------------------GA-TCTAGTAAC-AAAATA------------------------------------------------------------------------------A----A------------------------------AATAATCAATTAAAGAACAATAT-TTGTTCTAGAATTTCGCA--------------------------AAAA------------------------------------------------------------------GTGCAAAATATATGT--ATGCATATACACATACATATATAT----------------------------------------------------------------------------------------------------------T--------------------------------------GATAA--------AAGTGT-TTAA------ATTACAGTGCCTTACAAT----AAT-----AA--------------------------------------------------------------------------A-TGAAATCGGCTT----ACAATTAA--GG----------------
droMoj3 scaffold_6540:8979046-8979370 + TCTAAGCACGCACAAT----TACACT--AGC-----ACA--CATACATGCATACATACGTACATATACACA--------------------------------------------------------CACAT--------------ACA------------TATATCGAG---T-----A-TACACGCACAC---------------ACAT---------------AGC-----CAACGCACACAGGCAACTGAAAATTTGCCAATAA------------------------------------------------------------------------------GA-TCTAGTAAC-AGAA------------------------------------------------------------------------------AAAAAA-------AAATAATAATAATAATTAAAATTCAAATAATAAATAAAAGAACAATAT-TTGTTCTAGAATTTCGCA--------------------------TAAA------------------------------------------------------------------GTGCAAATTATATGTCTATGCAT--------------ATAT----------------------------------------------------------------------------------------------------------T--------------------------------------GATAA--------AAGTGT-TTAA------ATTACAGTGCCTTACAAT----AAT-----AA--------T-------------------------------CGGCTACA----T----ACA-----------TATG-TGAAATCTGTTT----ACAATCAA--TG----------------
droGri2 scaffold_14906:7133263-7133555 + TCTAAGCACGCACACT----TACACT--AGC------CC--CA--------CA----------------CA--------------------------------------------------------CACAT--------------ACATA----------C-T---ACA------CACA-TACACATACTCAAACGCATAATACACAGATACACGCGCGAT------------------------------AATGTT-GTCCAATCA------------------------------------------------------------------------------GA-TCTTGTAAC-AAAATC------------------------------------------------------------------------------A----AAAATAA---------------------------------TTGATGAACAATAA-TTGTTCTAGAATTTCGCAAAAAAAAAAAAAAAAAA----A--------ATT----TATATTA------A------------------------------------TTGAATAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAAAATAATTAAATAT-TGAT------TG--CAATGTCTACCGAA----AT-TGGGTTTAATTAATAT-------------------------------AAATAA-------------T-----------TATA-TGCAATCAATTT----ACAGTTTA--AG----------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCTAA-CACAC--ACT----CACACA----CCCAAGAAA--CA--------CA----------------CA--------------------------------------------------------CACAC--------------ACA------------CATACAGAG---TTCCGCC-CACACGCCCTA---------------AA--------------------------------------------------------------------------------------------------------------------------------------------AATC--GACAAAAAGTGC-----ATTTGCAGTCG--------------------------------------------GA-A--AACCTGCAAGAATA-----------------------------------------------------------------------------------------TATT--A--------CAA----ATTTTTGAAAAAAATTTAAAAAAAAATTAAATCTGAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAGTGC-TTCA------AT--CAGTGCCTTGCAAA----AC------AAACCTAGAAT-------------------------------AAAATACCCCC--AGATA------------AAATATCCAGATCATTACT-GATCAGTGAA--GA----------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................................................................................................ATTTGCAGTCG--------------------------------------------GA-A--AACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200200000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GC-----ATTTGCAGTCG--------------------------------------------GA-A--AACCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
droSec2
TCTAA-CACAC--ACT----CACACA----CCCAAGAAA--CA--------CA----------------CA--------------------------------------------------------CACAC--------------ACA------------CATACAGAG---TTCCGCC-CACACGCCCTA---------------AA--------------------------------------------------------------------------------------------------------------------------------------------AATC--GACAAAAAGTGC-----ATTTGCAGTCG--------------------------------------------GA-A--AACCTGCAAGAATA-----------------------------------------------------------------------------------------TATT--A--------AAA----ATTTTTGATAAAAATT-AAAAAAAAATTAAATCTGAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAGTGC-TTCA------AT--CAGTGCCTTGCAAA----AC------AAACCTAAAAT-------------------------------AAAATACCCCC-CAGATA------------AAATATCTAGATCATTACT-GATCAGTGAA--GA----------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................................................................................................................C-----ATTTGCAGTCG--------------------------------------------GA-A--AACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAGTGC-TTCA------AT--CAGT................................................................................................................................................2011.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAGTGC-TTCA------AT--CAGT................................................................................................................................................2311.0010010
dm3
TCTAA-CACAC--ACT----CACACA----TCCAAGAAA--CA--------CA----------------CA--------------------------------------------------------CACAC--------------ACA----------CATATACAGAG---TTCCGCC-CACACGCCCTA---------------AAA-------------------------------------------------------------------------------------------------------------------------------------------AATC--GACAAAAAGTGC-----ATTTGCAGTCG--------------------------------------------AA-A--TACCTGCAAGAATA-----------------------------------------------------------------------------------------TATT--A--------AAA----ATTTTTGATAAAAATTAAAAAAATAAATAAATCTGAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAGTGC-TTCA------AT--CAGTGCCTTGCAAA----AT------AAACCTAGAAT-------------------------------AAAATACCCCC-CCCCCC------------CCTTATACAGATCGCTACT-GATCAGTGAA--GA----------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................AAAAGTGC-----ATTTGCAGTCG--------------------------------------------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................CA----------CATATACAGAG---TTCCGCC-CACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................AA-------------------------------------------------------------------------------------------------------------------------------------------AATC--GACAAAAAGTGC-----ATTTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................CCCTA---------------AAA-------------------------------------------------------------------------------------------------------------------------------------------AATC--GACAAAAAGTGC-----ATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........CAC--ACT----CACACA----TCCAAGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................CAC--------------ACA----------CATATACAGAG---TTCCGCC-CACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTGCAAGAATA-----------------------------------------------------------------------------------------TATT--A--------AAA----AT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................TA---------------AAA-------------------------------------------------------------------------------------------------------------------------------------------AATC--GACAAAAAGTGC-----ATTTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................CACGCCCTA---------------AAA-------------------------------------------------------------------------------------------------------------------------------------------AATC--GACAAAAAGTGC-----A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TAA-CACAC--ACT----CACACA----TCCAAGAAA--................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................CACAC--------------ACA----------CATATACAGAG---T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................AAAAGTGC-----ATTTGCAGTCG--------------------------------------------AA-A--TAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................A----------CATATACAGAG---TTCCGCC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGCTACT-GATCAGTGAA--..................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCC------------CCTTATACAGATCGCTACT-..............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................CGCCCTA---------------AAA-------------------------------------------------------------------------------------------------------------------------------------------AATC--GACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTGCAAGAATA-----------------------------------------------------------------------------------------TATT--A--------AAA----A..........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGC-TTCA------AT--CAGTGC..............................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TAA-CACAC--ACT----CACACA----TCCAAGAAA--C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AA-CACAC--ACT----CACACA----TCCAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................AGTGC-----ATTTGCAGTCG--------------------------------------------AA-A--TACCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................TA---------------AAA-------------------------------------------------------------------------------------------------------------------------------------------AATC--GACAAAAAGTGC-----ATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................A--------CA----------------CA--------------------------------------------------------CACAC--------------ACA----------CATATACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AA--CA--------CA----------------CA--------------------------------------------------------CACAC--------------ACA----------CATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TCTAA-CACAC--ACT----CACACA----CCCAAGAAA--CA--------CA----------------CA--------------------------------------------------------CACAT--------------ACA------------------GAG---CTCCGCC-CACACGCCCTA---------------ATA-------------------------------------------------------------------------------------------------------------------------------------------AATC--GAGAAAAAGTGC-----ATTTGCAGTCG--------------------------------------------GA-A--AACCTGCAAGAATA-----------------------------------------------------------------------------------------TATT--A--------CAA----ATTTCTGATAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA--------AAGTGC-TTCA------AT--CAGTGCCTTGAAAA----AT------AAACCTAGA-T-------------------------------TAAATACCCCC-CAC---------------------CCAGATCGTTACT-GATCAGTGAA--GA----------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................CA----------------CA--------------------------------------------------------CACAT--------------ACA------------------GAG---CTCCGCC-CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
......................................................................................................................................................................................................................................................................................................................................................................AAAAAGTGC-----ATTTGCAGTCG--------------------------------------------GA-A--........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000
droYak3
TCTAA-CACAC--ACT----AACACA----CCCAAGAAA--CA--------CA----------------CA--------------------------------------------------------CGCAC--------------ACA------------------GAG---CTCCGCC-CACACGCCCTA---------------AAA-------------------------------------------------------------------------------------------------------------------------------------------AATC--GACAAAAAGTGC-----ATTTGCAGTCG--------------------------------------------GA-A--AACCTGCAAGAATA-----------------------------------------------------------------------------------------TATT--A--------CAA----ATTTTTGATAAAA-----AAAAAGAGTTAAATCTATAATTTAAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAAGTGC-TTCA------AT--CAGTGCCTTGAAAA----AT------AAACCTAGAAT-------------------------------AAAATACCCCT-TAC---------------------CCAGATCATTACT-GATCAATGAA--GA----------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAAGTGC-TTCA------AT--CAGT................................................................................................................................................2511.00100100000000
................................................................................................................................GCAC--------------ACA------------------GAG---CTCCGCC-CACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.....................................AA--CA--------CA----------------CA--------------------------------------------------------CGCAC--------------ACA------------------GAG---CTCCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
..........................................A--------CA----------------CA--------------------------------------------------------CGCAC--------------ACA------------------GAG---CTCCGCC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................................GC-----ATTTGCAGTCG--------------------------------------------GA-A--AACCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
.....................................AA--CA--------CA----------------CA--------------------------------------------------------CGCAC--------------ACA------------------GA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1880.13100100000000
droEug1
TCTAA-CACAC--ATT----CACACA----CCCAAGAAAACTA--------CA----------------CA--------------------------------------------------------CACAT--------------ACA------------AAAACACAG---TTCCGCC-TACACGCCCTA---------------AAA-------------------------AAATAG------C---------------AACCA------------------------------------------------------------------------------AT-AATTGCAAC-AAAAGTGC-----TTTTGCAGTCG--------------------------------------------GA-A--AAACTGCAATAAAA-----------------------------------------------------------------------------------------AATT--A--------AAA----ATTTTTAATA------------------------------------------AGAAAAT----------------------------------------TT------------------------------------------------------------------------------------------------------TT---------------------------------------AAAA-------ATTAAGTGC-TAAA------AT--CAGTGCCTTGAAAA----AT-AT-ACATACTTAATAT-------------------------------AAATTACCCCT--AA---------------------ACAGATCAAAATT-GATCAGTGAATTGAA-------------AGSizeHit CountTotal NormTotal
No Reads
droBia1
TCTAA-CACAC--ACT----CACACA----CCCAAGAAA--CA--------CA----------------CA--------------------------------------------------------CACAC--------------ACA------------------TAG---TTCCGCC-CACACGCCCAC---------------T--------------------CCAAGAAAGAGAG-------------------CCCAAAAA---------------------------------------------------------------------------------AATC----------GTGC-----ATTTGCAGTCG--------------------------------------------GGAA--AAACTGCAAAAAAA-------A---------------------------------------------------------------------------------TTATTTA--------AAAATATATTTTTAATA---ATC-----------------A------------------AAAAATTA--AA------------------------------G---------------------------------------------------------------------------------------------------------------T---------------------------------------------------TTGTGCCTAAA------AT--CAGTGCCTTGAAAATAAAAT-AC---ATACTTCAAAT-------------------------------TAAACACCCCT-C-C--A----AC------CCTCA-AAAGATCCGTATC-GATCAGTGAA--GAA---------------SizeHit CountTotal NormTotal
No Reads
droTak1
TCTAA-CACAC--ACT----CACACA----CCCAAGAAA--CA--------CA----------------CA--------------------------------------------------------CACAC--------------ACA------------------TAG---TTCCGCC-CACACGCCCTC---------------AAAAATAT----ATGAAAAACC------------------C---------------AACAA------------------------------------------------------------------------------AT-AATTGCAAC-TAAAGTGC-----TTTTGCAGTCG--------------------------------------------GA-A--AAACTGCATAGAAA-------A---------------------------------------------------------------------------------TA----A--------AAA----AATATTA------A------------------------------------TTAAAAAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATA--------AAGTGT-TAAA------AT--CAGTGCCTTGAAAA----AT-AT---ATACTTAAAAT-------------------------------TCAATACCCCC-TCC---------------------CCAGATCATTGAC-GATCAGTGAA--GAG---------------SizeHit CountTotal NormTotal
No Reads
droEle1
TCTAA-CACACACACT----CACACA----CCCAGGAAA--CA--------GT----------------CA--------------------------------------------------------CACAC--------------ACA------------------CAG---TTCCGCC-AACACGCCCAC---------------AAA---------------AACC------------------C---------------AACAG------------------------------------------------------------------------------AT-AGTTGCAGC-AAAAGTGC-----ATTGGCAATCA--------------------------------------------A-----AAATTGCAATAAAA-----------------------------------------------------AA-ATGTTTTGAAAT---------------------------------------------TT-------------------------------------CAAATCAAATTAGAAAATA--AA-----------------------------------T----------------------------------------------------------------------------------------------------------T--------------------------------------TAAAA--------AAGTGC-TAGA------AT--CAGTGCCTTGAAAA----A--------AACTTAAAAT-------------------------------CAATTACCCCT-CCC---------------------CCAGATCATTACC-GATCAGTGAA--GAA---------------SizeHit CountTotal NormTotal
No Reads
droRho1
TCTAA-CACAC--ACACACTCACACA----CCCAGGAAA--CA--------AA----------------AA--------------------------------------------------------CACAC--------------AC--------------------AG---TTCCGCC-CACACGCCCAC---------------AAAT---------------ACC------------------C---------------AACAG------------------------------------------------------------------------------AT-AGTTGCAAC-AAAAGTGC-----ATTTGCAGTCA--------------------------------------------AAAA--AAACTGCAAAAAAA-----------------------------------------------------------------------------------------TTTTCCA--------AAAAT--AATTTTAAAAAA----------------------------------------------------------------------------------GT---T-------------------------------------------------------------------------------------------------------TT---------------------------------------AAAAAA--------AAGTGA-TTTA------AT--CAGTGCCTTGAAAA----AA--T---ATACTTAAAAT-------------------------------TAAATACCCCCTCCC---------------------CCAGATCATTATC-GATCAGTGAA--GTA---------------SizeHit CountTotal NormTotal
No Reads
droFic1
TCTAA-CACAC--ACT----CACACA----CCCAAGAAC--CA--------CA----------------CA--------------------------------------------------------CACAC--------------AC--------------------AG---TCCCGCC-CACA-GC------------------------------------AAACC------------------C---------------AACGG------------------------------------------------------------------------------AT-TATTGCAAC-AAAAGTGC-----ATTTGCAGTCG--------------------------------------------GT-T--AAACTGCAAAATC---------------------------------------------------AATACTTAGTTTTAGAAATTCAAA--------------------------TAAAAAA----ATATTTGAAAAAA---------------------------------------------------------------------------------GT---TT------------------------------------------------------------------------------------------------------TT---------------------------------------CAAAAT--------AAGTGC-TAAA------AT--CAGTGCCTTGAAAA----AT-AT---ATACTTAAATT------------------------------TAAAATACCCCT-C-C---------------------CCAGATCGTTACT-GATCAGTGAA--GA----------------SizeHit CountTotal NormTotal
No Reads
droKik1
TCTAAACTCAC--ACA----TACTCT--GAC-----ACA--CACTCACGCACACCCACGCCCACACACGCA--------------------------------------------------------CACAC--------------CCT------------T------GG---AT----------CGGG---------------------------------------C------------------C---------------AGTAA------------------------------------------------------------------------------AT-AATTGCAAC-AAAAGTGCGGCGAAATTGCAGTCG--------------------------------------------GAAA--AATCTGCAAGAAAA------------------------------------------------------------------------------------------ATC--A--------AAA----AATTGAAACA------------------------------------------ACAAAAT----------------------------------------TTTTCAACTAAAAAGTCTAGTTTGGCAAAATTACAGAAATTTTGAAATACAAATTTTGCCAAATAGGAATCATGAAATAAATAATAATTAATCATAAAAAATTTTTATTA-----------------------------------CAAAAA--------TAGTGC-TGAA------AT--CAGTGCCTTAAAAA----AG----------CCA---T-------------------------------TAAATAAA----T----ACATAATATTTTAACGCA-GCAGATCACCAAT-GATCAGTGCTGAGA----------------SizeHit CountTotal NormTotal
No Reads
droAna3
TCTAA-CACAC--ACC-A--CACACACAAACACCAGCAG--CA--------CA----------------CA--------------------------------------------------------CAC--------------------------------------AACACCATCGCAACATACGCGCCA---------------AAA------------------------AA-----------A---------------AGAAG------------------------------------------------------------------------------GA-AATTGTAAC-GAAAGTGCTAAACAACTGCAGTAA--------------------------------------------AAAAA-AGTCTGCAAAAAAAT-----AA---------------------------------------------------------------------------------ATACCCA--------CAA-----------------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGTGT-TAAA------AG--TAGTGCCTTAAAAA----AT------AATTT-----------------------------------------TATCCCT-A-C--A------------ACATA-TCAGATCAATATTGGATAAGTGAA--GA----------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................TGTAAC-GAAAGTGCTAAACAACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----AT------AATTT-----------------------------------------TATCCCT-A-C--A------------AC................................................2011.001010000
..........C--ACC-A--CACACACAAACACCAGCAG--C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.....................ACACACAAACACCAGCAG--CA--------CA----------------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA-TCAGATCAATATTGGATAAGT.......................2411.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGTGT-TAAA------AG--TAGTGCCTT...........................................................................................................................................2311.001010000
............................................................................................................................................................................................GCCA---------------AAA------------------------AA-----------A---------------AGAAG------------------------------------------------------------------------------GA-AATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGT-TAAA------AG--TAGTGCCTT...........................................................................................................................................1911.001010000
.........AC--ACC-A--CACACACAAACACCAGCAG--C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
droBip1
TCTAA-CACAC--ACT----CACACACAAACCCCAG-----CA--------CA----------------CA--------------------------------------------------------CACCA--------------C---------------------CA---CACCGCAACATACGCGCCA---------------AAA------------------------AA-----------------------------AAG------------------------------------------------------------------------------GA-AATTGTAAC-GAAAGTGCTACACCACTGCAGTAA--------------------------------------------AAAAAGAATCTGCAAAAAAT------AA---------------------------------------------------------------------------------TTACCCA--------AAA-----------------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGTGC-TAAA------AC--TAGTGCCTTAAAAA----AT------AA--------T-------------------------------TGAATCCCCAC------A------------ACATA-TCAGATCAATATTGGATAAGTGAA--GA----------------SizeHit CountTotal NormTotal
No Reads
dp5
TCTAAGCACAC--ACT----CACACA--AAC-----TTA--CACGCGCGCACACACACACACACACGCACA------------A-----------------CACACCGTA----------------------CTCGGTGCA---------------------------------TACTCC-CACACGCACAC---------------AAATACGCGCGCGCGAAAAACC------------------C---------------AACCGCTTGGGAAAACACGGAAAAACAAAAACTTGGATACTTTTCAAACCAAAATATACACAACAAAAAAGTTGAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAT-------------TT-------------------------------------CAAATTTCATAAGAAATTG--CA------------------------------G---------------------------------------------------------------------------------------------------------------TTCCCCCCCCTCCACCAAAAAAAAAAAAAACTGCTCGG-CAAAA--------AAGTGC-TAAAATCGAAAT--CTGTGCCTTAAAAT----A----------CCCAAAATATTTTGCCCATAAAAATACAAAATCAAATCA--------------------AAATTCTGT-------AGCGATCACTGTG-GATCGTTG-A--GA----------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGTG-GATCGTTG-A--GA----------------1811.0010100000000
..................................................................................................................................................................................................................................................................................................AAAACTTGGATACTTTTCAAACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGCTCGG-CAAAA--------AAGTGC-T.................................................................................................................................................................2311.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------------------------------------------------------------------------------------------------TTCCCCCCCCTCCACCAA...........................................................................................................................................................................................................1911.0010010000000
..................................................ACACACACACACACACGCACA------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
droPer2
TCTAAGCACAC--ACT----CACACA--AAC-----TTA--CACGCGCACACACACACACACACA----CA------------A-----------------CACACCGTA----------------------CTCGGTGCA---------------------------------TACTCC-CACACGCACAC---------------AAATACGCGCGCGCGAAAAACC------------------C---------------AACCGCTGGGGAAAACACGGAAAAACAAAATCTTGGATACTTTTCAAACCAAAATATACACAACAAAAAAGTTGAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAT-------------TT-------------------------------------AAATTTTCATAAGAAATTG--CA------------------------------G---------------------------------------------------------------------------------------------------------------TTCCCCCCCCTCCAGCAAAAAA--AAAAAACTGCTCGG-CGAAA--------AAGTGC-TAAAATCGAAAT--CTGTGCCTTAAAAT----A----------CCCAAAATATTTTGCCCATAAAAATACAAAATCAAATCA--------------------AAATTCTGT-------AGCGATCACTGTG-GATCGTTG-A--GA----------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAAATCA--------------------AAATTCTGT-------AGCG........................................2314.004400000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCA--------------------AAATTCTGT-------AGCGATCACTGTG-GAT...........................2912.002200000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAAATCA--------------------AAATTCTGT-------AGC.........................................2212.002101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-------AGCGATCACTGTG-GATC..........................1911.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGATCACTGTG-GATCGTTG-A--GA----------------2411.001010000
....................................................................................................................................................................................................................................................................................AACACGGAAAAACAAAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
droWil2
TCTAA-C-CAC--ACT----TACATA----TACAT-ATA--TACA------TA----------------CAAATATATATATATATAT--------------------------ATATATATACGCACAC--AACAATACACAC--TCC------------------TTC---TCCCTCT-CACACGCACAC---------------GCA--------TGCT------------------------------GGGATT-ATT----------------------------------------------ACATCAAAACCCTTCTAAGAAAGAAGAAGAATAAATAAAATATTA--TACAACAAATCT-----TTTTGCAGTTTTTATGCAAAAAACATAAATCAAGTGCCGCCTACAAGTGCCTGAAAAAAT-AAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACA-AAAAA-------------------------------AAAAAATCATT-TAT---------------------ATAAATCTATGAA-AATCAGTGCT--AAATAATAATTAATTTAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................CACGCACAC---------------GCA--------TGCT------------------------------GGGATT-......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
....................................................................................................................................................................................................................................................................................................................ACATCAAAACCCTTCTAAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
..................................................................................ATATAT--------------------------ATATATATACGCACAC--AACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGTGCT--AAATAATAATTA......2111.00100010
droVir3
TCTAAGCACGCACACT----TACACT--AGC-----ACA--CACACACACACAC----------A----CAAACA--------ACTATACGCACGTATGCACACATCGTATAAAATATAAA------CACGC-ACATTACACACACACA--CACACACACACACACACAC---ATACGCA-CATAC---------------------------AT----GT-------------------------------GATGAT-TCCCAATAA------------------------------------------------------------------------------GA-TCTAGTAAC-AAAATA------------------------------------------------------------------------------A----A------------------------------AATAATCAATTAAAGAACAATAT-TTGTTCTAGAATTTCGCA--------------------------AAAA------------------------------------------------------------------GTGCAAAATATATGT--ATGCATATACACATACATATATAT----------------------------------------------------------------------------------------------------------T--------------------------------------GATAA--------AAGTGT-TTAA------ATTACAGTGCCTTACAAT----AAT-----AA--------------------------------------------------------------------------A-TGAAATCGGCTT----ACAATTAA--GG----------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................ATACGCACGTATGCACACATCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTAAAGAACAATAT-TTGTTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
..............................C-----ACA--CACACACACACAC----------A----CAAACA--------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000001000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATACACATACATATATAT----------------------------------------------------------------------------------------------------------.............................................................................................................................................................................................................................20200.051000000000000000000010000000000000000000000000000000000000000000
droMoj3
TCTAAGCACGCACAAT----TACACT--AGC-----ACA--CATACATGCATACATACGTACATATACACA--------------------------------------------------------CACAT--------------ACA------------TATATCGAG---T-----A-TACACGCACAC---------------ACAT---------------AGC-----CAACGCACACAGGCAACTGAAAATTTGCCAATAA------------------------------------------------------------------------------GA-TCTAGTAAC-AGAA------------------------------------------------------------------------------AAAAAA-------AAATAATAATAATAATTAAAATTCAAATAATAAATAAAAGAACAATAT-TTGTTCTAGAATTTCGCA--------------------------TAAA------------------------------------------------------------------GTGCAAATTATATGTCTATGCAT--------------ATAT----------------------------------------------------------------------------------------------------------T--------------------------------------GATAA--------AAGTGT-TTAA------ATTACAGTGCCTTACAAT----AAT-----AA--------T-------------------------------CGGCTACA----T----ACA-----------TATG-TGAAATCTGTTT----ACAATCAA--TG----------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----ACA-----------TATG-TGAAATCTGTTT----ACA.........................2311.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTATGCAT--------------ATAT----------------------------------------------------------------------------------------------------------T--------------------------------------GATAA--------A........................................................................................................................................................................2211.001100000
.........................................................................................................................................................................G---T-----A-TACACGCACAC---------------ACAT---------------AGC-----CAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----------------------------------------------------------------------------------------------------------T--------------------------------------GATAA--------AAGTGT-TTAA------AT......................................................................................................................................................2011.001100000
droGri2
TCTAAGCACGCACACT----TACACT--AGC------CC--CA--------CA----------------CA--------------------------------------------------------CACAT--------------ACATA----------C-T---ACA------CACA-TACACATACTCAAACGCATAATACACAGATACACGCGCGAT------------------------------AATGTT-GTCCAATCA------------------------------------------------------------------------------GA-TCTTGTAAC-AAAATC------------------------------------------------------------------------------A----AAAATAA---------------------------------TTGATGAACAATAA-TTGTTCTAGAATTTCGCAAAAAAAAAAAAAAAAAA----A--------ATT----TATATTA------A------------------------------------TTGAATAGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAAAATAATTAAATAT-TGAT------TG--CAATGTCTACCGAA----AT-TGGGTTTAATTAATAT-------------------------------AAATAA-------------T-----------TATA-TGCAATCAATTT----ACAGTTTA--AG----------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAA----A--------ATT----...........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05110

Generated: 05/18/2015 at 08:41 AM