ID:

dsi_10978

 Coordinate:

x:2190248-2190367 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AGCTTACGTTCGCGTGGAGGTCAAGGAACGGCGCGGAGATATCGGAGGAGGTATGTTGGGATGTAATTGAAAAATGTACTGTGCAAGTAAGCTTATATAGAAATGGTTTTCATCGTTGTTAATTCCTGCAAGAATACAATTTAACGCCAATCTTGAAATGCATTTTACAGTTGATGATGATTCCGACCGGGATCCAATAATTCAAAATCCGGCACAACCA
**************************************************...(((.(((((.((((((((((.....(((((.(((....))).)))))......))))))..))))...))))).)))(((((.((.(((((........))))).)).)))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM343915
embryo
 M025
embryo
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 SRR553488
RT_0-2 hours eggs
 M023
head
.........................................................................................................................................................................GTTGATGATGATTCCGACCGG.............................. 21 0 1 3.00 3 0 2 1 0 0 0 0 0 0 0 0
............................................GAGTAGCTATGTTCGGATG............................................................................................................................................................. 19 3 11 1.45 16 0 0 0 15 0 0 0 0 0 1 0
.............................GGCGCGGGGATATCGGAGGA........................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GTTGATGATGATTCCGAC................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................GCGGAGATATCGGAGGAGTTG....................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..............TGGAGGTCAAGGAACGGCGCGGAG...................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................GGAGTTGATGATGATTCCGACCGGGATC.......................... 28 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TGATGATTCCGACCGGGAT........................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TGACGATGATTCCGACCGGG............................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....ACGTTCGCGTGGAGGTCAAGG.................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................GAGATATCGGGGGACGT........................................................................................................................................................................ 17 2 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0
..................................GGAGCTATCGGAGGA........................................................................................................................................................................... 15 1 20 0.25 5 0 0 0 0 0 0 5 0 0 0 0
..................................................GTGTGTTGGGCTGGAATTGAA..................................................................................................................................................... 21 3 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0
.........................GAACGGGGCGGAGAT.................................................................................................................................................................................... 15 1 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0
............................................GAGCACGTATGTTGGGA............................................................................................................................................................... 17 2 8 0.13 1 0 0 0 0 0 0 0 1 0 0 0
......CGTTCCCGTGGAGCTCACG................................................................................................................................................................................................... 19 3 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................ATCAGGATTCCGACCCGGAT........................... 20 3 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................TTTACAGTTGATGAG.......................................... 15 1 13 0.08 1 0 0 0 0 0 0 1 0 0 0 0
..........................AACGGGGCGGAGATA................................................................................................................................................................................... 15 1 13 0.08 1 0 0 0 0 0 0 1 0 0 0 0
....TGCGTTCGCGTCGAGGACAA.................................................................................................................................................................................................... 20 3 14 0.07 1 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................TATTACAGTCGATGAGGAT....................................... 19 3 19 0.05 1 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................AACGACAATCTTGAAATCG........................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0
....TAGGCACGCGTGGAGGTC...................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TCGAATGCAAGCGCACCTCCAGTTCCTTGCCGCGCCTCTATAGCCTCCTCCATACAACCCTACATTAACTTTTTACATGACACGTTCATTCGAATATATCTTTACCAAAAGTAGCAACAATTAAGGACGTTCTTATGTTAAATTGCGGTTAGAACTTTACGTAAAATGTCAACTACTACTAAGGCTGGCCCTAGGTTATTAAGTTTTAGGCCGTGTTGGT
**************************************************...(((.(((((.((((((((((.....(((((.(((....))).)))))......))))))..))))...))))).)))(((((.((.(((((........))))).)).)))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M053
female body
 M023
head
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
............................................................................................................................................................................CTACCACAAAGGCGGGCCCTAG.......................... 22 3 1 2.00 2 2 0 0 0 0 0 0 0
..............................................................................................................................................................................ACCACAAAGGCAGGCCCTAG.......................... 20 3 2 1.50 3 0 0 2 0 0 1 0 0
..................................................................................................................................................................................CTAAGGCTGGCCCAAGGT........................ 18 1 1 1.00 1 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................AGTATTAGGCCGTGT.... 15 1 2 1.00 2 0 0 0 0 1 0 1 0
..............................................................................................................................................................................ACCACAAAGGCGGGCCCTAGGTT....................... 23 3 2 0.50 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................ACCACAAAGGCTGGCCCTAGCTT....................... 23 3 2 0.50 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................ACCACTAAGGCGGGCCCTTG.......................... 20 3 2 0.50 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................ACCACTAAGGCGGGCCC............................. 17 2 11 0.27 3 0 0 0 1 1 0 0 1
..............................................................................................................................................................................ACCACTAAGGCGGGCCCT............................ 18 2 4 0.25 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................ACCACAAAGGCTGGCCCT............................ 18 2 5 0.20 1 0 0 1 0 0 0 0 0
..............................................................................................................................................................................ACCACCAAGGCAGGCCCTAG.......................... 20 3 5 0.20 1 0 0 1 0 0 0 0 0
..............................................................................................................................................................................ACCACCAAGGCGGGCCCTAG.......................... 20 3 8 0.13 1 0 0 0 0 1 0 0 0
...................................................................................................................................................................................TAAGGCTGGCCCAAGGTGC...................... 19 3 8 0.13 1 0 0 0 1 0 0 0 0
..............................................................................................................................................................................ACAACTAAGGCGGGCCC............................. 17 2 11 0.09 1 0 0 0 0 0 0 0 1
.......................................................................................................................................................................................................TCAGTATTAGGCCGTGT.... 17 2 12 0.08 1 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................CAGTATTAGGCCGTGTT... 17 2 12 0.08 1 0 0 0 0 0 0 0 1
.......................TGCTTGCCCCGCCTCTAAA.................................................................................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................ACCACTAAGCCTGGCC.............................. 16 2 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:2190198-2190417 - dsi_10978 AGCTTACGTTCGCGTGGAGGTCAAGGAACGGCGCGGAGATATCGGAGGAGGTATGTTGGGAT----------------------------------------------------------------------------------------GTAATTGAAAAATG----------------------T----------------------ACTGTGCAAGTAAGCT-----------------TATATAGAAATG--------------GT-----TTTCATCG-TTGTTAATTCCTGCAAGAATA--CAATTTAACGCCAATCTTGAAATGCATTTTACAGTT--GATGATGATT--------CC------GAC------CGGGATCCA---ATAATTCAAAATCCGGC--------------A------CAACCA
droSec2 scaffold_10:2148246-2148465 - AGCTTACGTTCGCGTGGAGGTCAAGGAACGGCGCGGAGATATCGGAGGAGGTATGTTGGGAT----------------------------------------------------------------------------------------GTAAATGAAAAATG----------------------T----------------------ACTGTGCAAGTAAGCT-----------------TATATAGAAATG--------------GT-----TTTCATCG-TTGTTAATTCCTGCATGAATA--GAATTTAACGCCAATCTTGAAATGCATTTTACAGTT--GATGATGATT--------CC------GAC------CGGGATCCC---ATAATCCAAAATCCGGC--------------A------CAACCA
dm3 chrX:2375860-2376079 - AGCTCACGTTCGCGTTGAGGTCCAGGAACGGCGAGGAGATATCGGAGGAGGTATGTTGGGAT----------------------------------------------------------------------------------------GTAATTGAAAAGTG----------------------T----------------------ACTATGCAAGTAAGCT-----------------GATATAGAAATC--------------AT-----TTCCATCG-TTGTTAATTCCTGCAAGAATA--AACTTTAACGTCAAGCTTGAAATGCATTTTACAGTT--GATGATGATT--------CC------GAC------CGGGATCCC---ATAAACTACAATCCGCC--------------A------CAACAA
droEre2 scaffold_4644:2325243-2325484 - AGTTCACATTCGCGTGGATGTCCATGCAAGGCGCGGAGATATCGGAGAAGGTATGTTGGCAT----------------------------------------------------------------------------------------GTAATTGAAAAATGCTGAAGACAACGGAATTTAGCTT----------------------TCTTAGCTAGCACTCT-----------------TAAATAGAAATT-------------TAT-----TCCCATTG-TTGTTAATTCAAGCAAGAATG--GACATTAACGCCTAGCTT-ATATGCATTTTACAGTT--GATGATGATA--------CC------GAC------CTGGAACCC---GTACACTACGATCCGGA--------------A------CCACCC
droYak3 X:5969661-5969881 + AGCTCACGTTCGCGTTACGATTCAAGAAAGGCGCGGCGATATCGGATCAGGTATGTTGAAGA---------------------------C-------------------------------------------------------------AAATTAAT-TA--------------------GGTCT----------------------TCTTTACAAGCAATCT-----------------TAAATAAAAGTT--------------GT-----TCCAATTG-TT-TAAATTCATATAAGAATACAGACTTTAACGCCCAACTT-ATGTGCACTTCACAGCC--GATGATGATT--------CT------GAT------CGGGATCCC---AGAACCTACATTCCGTC--------------A------CAACCC
droEug1 scf7180000409277:60980-61138 - ACGCCACGTTCGCGTAGAGGTCCAACAGAAACGTGGTGACATATCAGAAGGTGAGTCTGGT-----------------------------------------------------G-------------AAACCTGTCCGTATGCTGAGTA--------ACTAATA------A--------------TTAATCTTAAT--------------------------CTTTA-------------------------------------------------------------------------------------------------------TATTTCACAGTG--GATGCAGATT--------CC------GAT------TCGAATA----------------------ATCCGTACTAT----------CCAACG
droBia1 scf7180000301760:4790540-4790595 + ACGCTATATTCGCGTGGAGATCCAAGAGAGGCGGGGTGACATTGGAGGAGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415151:431509-431716 + ACAATACATTCGCGTGGAGGTACAACCCAGACGGGGTGACGTCGGTGCAGGTGAGTTCGGTTTCTTTACCATGTAGTAGTTACCTTTAGTTGAACGCGAATTCTTCAGAACAAAA-------------GAAAGTTTCTTTATACAAAGCC--------ATATATA------T--------------TGATTCGTAAA--------------------------CCATATTTTTAGGAGGAGA-----------------------------------------------------------------------------------------------------------------TGACAATG------GTGAT------GTCGATACCCGA----------------CAG--------------------CCTCC
droEle1 scf7180000491011:691505-691617 - TAAATCCGTGCGCGTGGAAGTTCAGCCCAAACGGGGCGACATCGGAGGAGGTGAGTCCTTTC---------------------------A------------------------G---------------------CC-------AGGATATGTTTTAAAATAA----------------------C----------------------AATCGACAAATACTCA-----------------GTCATAGAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779506:482868-482923 - AGCCTACATTAATGTGGAAATTAAGCCCAAACGGGGCGACATCGGAGGAGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453927:176359-176610 - GTTCCACGTGCGCGTGGACGTGCAGCCCAAGAGGGGTGACATCGGAGCAGGTGAGTCAACAG---------------------------T------------------------T-------------GAAACGAACC----AAGAAA--------C---TG--------------GGTTTCAAGGT----------------------TCGGGGTTT--------------------------AATACGCATGTTTAAGGAAATTTTATAGTTCGTCAATCATATGTCAACTCATCCCAGACTA--AGTTCGAAAGCTCCTTTTTAACTCCG-TTTACATTTACAATCAAGATT--------CCGACGTGGAA------ACCGATCCCAGG----------------CTGCCCTACTCC----------CCCACG
droKik1 scf7180000302258:514538-514699 - GCGCAGCGTCCGTGTTGAGGTCAATCCCAAGCGCGGCGATGTGGGAATACGTAAGAGTTTTT---------------------------C------------------------GGATAAATACAT----------CT-------TCCACTTGTCT-----------------------------------------------CTC----ATTGTTATC----TCTTTTTTTTCCTAGATGA-----------------------------------------------------------------------------------------------------------------CGACGACGAT------GGC------CATAATCA-----GGGACT-GGATCCTGG--------------A------CAGCTT
droAna3 scaffold_12929:2286289-2286460 - GGCCACCGTTCGTGTGGATGTCCGTCCCAAGCGCGGAGACATCGGAATAGGTAGGGAGTTCA---------------------------C------------------------CCATCGACTTAT----------CC-------GGAATATGTAT-------------------------------------------------------AGAGTCTGTA----TCCTTCTTCGTAGGCGA-----------------------------------------------------------------------------------------------------------------TCCCGACT------CGGAAACCAACCCGGATCCCT--ACGAACCGCATCCCTAC--------------CCGGA--TCCCTA
droBip1 scf7180000396434:280448-280498 - GGCCACCATTCGCGTGGACGTTCGCCCCAAGCGTGGTGACATCGGAATAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XL_group3a:2049340-2049493 - GCGCAGCGTTCGAGTGGATATTCAGCCGAAACGCGGAGACATCAGTGATAGTAAGAGATTAT---------------------------G------------------------AA----------ATGAGAC---------TTGGAA--------AGAAGATTCTT------------------------------------AT--CA-----GCAAAATATCTTCCTCTTCCTTAGATGA-----------------------------------------------------------------------------------------------------------------TGGCGATG------TGGAT------CATGGACCCTAC----------------CAA--------------------ACCGA
droPer2 scaffold_11:2626922-2627075 + GCGCAGCGTTCGAGTGGATATTCAGCCGAAACGCGGAGACATCAGTGATAGTAAGAGATTAT---------------------------G------------------------AA----------ATGAGAC---------TTGGAA--------AGAAGATTCTT------------------------------------AT--CA-----GCAAAATATCTACCTCTTCCTTAGATGA-----------------------------------------------------------------------------------------------------------------TGGCGATG------TGGAT------CATGGACCCTAC----------------CAA--------------------ACCGA
droWil2 scf2_1100000004909:12084588-12084656 - GCGTTCGATACGCGTGGAAGTGAAACCAAAACGTGGTGATATACCCGAGGATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTGATG------TTGAG------AT------------------------------------------------------
droVir3 scaffold_12928:1368416-1368591 - GCGCACCATACGCATCGATGTGCAGCCCAAGCGCGGCGATATTGGTGACTGTAAGTGGCTGA---------------------------C------------------------C-------------AACACTGGCC-------GTGAAA-----C---GGTTAACAACAC--------------TG----------------------CTTGACATT----CTTTTTGCTTTGCAGCTGA-----------------------------------------------------------------------------------------------------------------CGGCGATG------TGGAA------CACGATCCCTAT----------------CAGCAGCCATATTACCCACAGCCGCCCA
droMoj3 scaffold_6473:13640396-13640572 + GCGGGCCGTACGCATCGATGTGAAGCCCAAGCGAGGTGACATCGGTGATCGTAAGTAGCTCA---------------------------G------------------------CC------------AACAC---------GCTGTT--------CAACACTTTACAACAC--------------TA------CACCTCTCTCTCT--CTCTCGCTCCCTCTCTCACTCTCTTACAGGCGA-----------------------------------------------------------------------------------------------------------------TGGCGATG------TGGAG------CGCGATCCCTAT----------------CTGCC----------G------CAATAC
droGri2 scaffold_15203:8362559-8362648 + GGCCAGCATTCGCATCGAAGTCCAACCCAAGCGCGGCGATATCGGTGACGGTGAGTGTAA-------------------------------------------------------A----------ATACAGT---------CCAGTT--------CAAGAATTCAT--------------------------------------------TGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGCTTACGTTCGCGTGGAGGTCAAGGAACGGCGCGGAGATATCGGAGGAGGTATGTTGGGAT----------------------------------------------------------------------------------------GTAATTGAAAAATG----------------------T----------------------ACTGTGCAAGTAAGCT-----------------TATATAGAAATG--------------GT-----TTTCATCG-TTGTTAATTCCTGCAAGAATA--CAATTTAACGCCAATCTTGAAATGCATTTTACAGTT--GATGATGATT--------CC------GAC------CGGGATCCA---ATAATTCAAAATCCGGC--------------A------CAACCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................................................................GTT--GATGATGATT--------CC------GAC------CGG.....................................................2113.00300210000000000000
....................................................................................................................................................................................................................................................................................................................................................GTT--GATGATGATT--------CC------GAC------........................................................1811.00100000000000100000
..............TGGAGGTCAAGGAACGGCGCGGAG..............................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000010000
...........................................................................................................................................................................................................................................................................................................................................................TGATGATT--------CC------GAC------CGGGAT..................................................1911.00100000000000100000
.....ACGTTCGCGTGGAGGTCAAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
..............................................................................................................................................................................................................................................................................................................................................TTTACAGTT--GATGAG.....................................................................................15130.08100000000001000000
droSec2
AGCTTACGTTCGCGTGGAGGTCAAGGAACGGCGCGGAGATATCGGAGGAGGTATGTTGGGAT----------------------------------------------------------------------------------------GTAAATGAAAAATG----------------------T----------------------ACTGTGCAAGTAAGCT-----------------TATATAGAAATG--------------GT-----TTTCATCG-TTGTTAATTCCTGCATGAATA--GAATTTAACGCCAATCTTGAAATGCATTTTACAGTT--GATGATGATT--------CC------GAC------CGGGATCCC---ATAATCCAAAATCCGGC--------------A------CAACCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................GAACGGCGCGGAGATATCGGAGGA...................................................................................................................................................................................................................................................................................................................................................................................................2422.5051040
...TTACGTTCGCGTGGAGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................1821.5030030
.........................GAACGGCGCGGAGATATCGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................2221.0020020
....................................................................................................................................................................................................................................................................................................................................................GTT--GATGATGATT--------CC------GAC------CG......................................................2021.0020020
...TTACGTTCGCGTGGAGGTCAAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................2321.0020110
AGCTTACGTTCGCGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................1921.0020020
....................................................................................................................................................................................................................................................................................................................................................GTT--GATGATGATT--------CC------GAC------CGGGA...................................................2321.0020020
..................GGTCAAGGAACGGCGCGGAGATATC.........................................................................................................................................................................................................................................................................................................................................................................................................2520.5010010
..........................AACGGCGCGGAGATATCGGAGGA...................................................................................................................................................................................................................................................................................................................................................................................................2320.5010001
...............GGAGGTCAAGGAACGGCGCGGAGAT............................................................................................................................................................................................................................................................................................................................................................................................................2520.5010010
...................GTCAAGGAACGGCGCGGA...............................................................................................................................................................................................................................................................................................................................................................................................................1820.5010010
.GCTTACGTTCGCGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010010
...............GGAGGTCAAGGAACGGCGCGGA...............................................................................................................................................................................................................................................................................................................................................................................................................2220.5010010
...........................ACGGCGCGGAGATATCGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................2020.5010010
.............................GGCGCGGAGATATCGGAGGA...................................................................................................................................................................................................................................................................................................................................................................................................2020.5010010
.....................CAAGGAACGGCGCGGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................1820.5010001
..........................AACGGCGCGGAGATATCGGAGGAGT.................................................................................................................................................................................................................................................................................................................................................................................................2520.5010010
.........................GAACGGCGCGGAGATATC.........................................................................................................................................................................................................................................................................................................................................................................................................1820.5010010
............................CGGCGCGGAGATATCGGA......................................................................................................................................................................................................................................................................................................................................................................................................1820.5010010
.........................................................................................................................................................................................................................................................................................................................................................GATGATGATT--------CC------GAC------CGGG....................................................1920.5010010
...TTACGTTCGCGTGGAGGTCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010010
...........................ACGGCGCGGAGATATCGGAGG....................................................................................................................................................................................................................................................................................................................................................................................................2120.5010010
..........................AACGGCGCGGAGATATCGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................2120.5010010
.........................................................................................................................................................................................................................................................................................................................................................GATGATGATT--------CC------GAC------CGGGA...................................................2020.5010010
dm3
AGCTCACGTTCGCGTTGAGGTCCAGGAACGGCGAGGAGATATCGGAGGAGGTATGTTGGGAT----------------------------------------------------------------------------------------GTAATTGAAAAGTG----------------------T----------------------ACTATGCAAGTAAGCT-----------------GATATAGAAATC--------------AT-----TTCCATCG-TTGTTAATTCCTGCAAGAATA--AACTTTAACGTCAAGCTTGAAATGCATTTTACAGTT--GATGATGATT--------CC------GAC------CGGGATCCC---ATAAACTACAATCCGCC--------------A------CAACAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......CGTTCGCGTTGAGGTCCA............................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000101000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
........TTCGCGTTGAGGTCCAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.........TCGCGTTGAGGTCCAGGAACGGCGAG.................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTCGCGTTGAGGTCCAGGAACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................GGTCCAGGAACGGCGAGGAGATATCGGA......................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CGTTCGCGTTGAGGTCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CGCGTTGAGGTCCAGGAA........................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
....................TCCAGGAACGGCGAGGAGATATCGGA......................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TTGAGGTCCAGGAACGGCGAGGAGATA...........................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
..............................GCGAGGAGATATCGGAGGA...................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GCTCACGTTCGCGTTGAGGTCCAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................AACTTTAACGTCAAGCTTA..............................................................................................................1911.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CACGTTCGCGTTGAGGTCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGAGGTCCAGGAACGGCGAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................T--GATGATGATT--------CC------GAC------CGGGA...................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...................GTCCAGGAACGGCGAGGAGATG...........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CCC---ATAAACTACAATCCGCC--------------A------CAACAA2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................GTT--GATGATGATT--------CC------GAC------CGGG....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....CACGTTCGCGTTGAGGTCCAGGAACGG.....................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................GGCGAGGAGATATCGGAGGAGT.................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GCGTTGAGGTCCAGGAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...TCACGTTCGCGTTGAGGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TAACGTCAAGCTTGAAATGCAT......................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................GTCAAGCTTGAAATGCATTTTACAG...............................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GGTCCAGGAACGGCGAGGAGATAT..........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................GTT--GATGATGATT--------CC------GAC------CGG.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...........................ACGGCGAGGAGATATCGGA......................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AGGAGATATCGGAGGAGT.................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GTCCAGGAACGGCGAGGAG..............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.................AGGTCCAGGAACGGCGAGGAGATATCGG.......................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................ACTATGCAAGTAAGCT-----------------GATATAGAAAT.......................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TCACGTTCGCGTTGAGGTCCA............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GCGTTGAGGTCCAGGAACGGCGAGGAG..............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.........................GAACGGCGAGGAGATATCGGAGG....................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................AATA--AACTTTAACGTCAAGCTTGA.............................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AGGAGATATCGGAGGAGGTA...............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..........................AACGGCGAGGAGATATCGGAGG....................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CCAGGAACGGCGAGGAGATATCGGA......................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GTCCAGGAACGGCGAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................GATGATGATT--------CC------GAC------CGGGATCCC---ATA.........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................C------GAC------CGGGATCCC---ATAAACTACA..................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CAGGAACGGCGAGGAGATATCGGAGG....................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GAGGTCCAGGAACGGCGAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CC---ATAAACTACAATCCGCC--------------.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TCGCGTTGAGGTCCAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
........TTCGCGTTGAGGTCCAGGAACGGCGA..................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................GGTCCAGGAACGGCGAGGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.............GTTGAGGTCCAGGAACGGCGAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............CGTTGAGGTCCAGGAACGGCGAGGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...............TGAGGTCCAGGAACGGCGAGG................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.............................GGCGAGGAGATATCGGAGGAG..................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................GAATA--AACTTTAACGTCAAGCTTG..............................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CACGTTCGCGTTGAGGTCCAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GGCGAGGAGATATCGGAGGA...................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ACGGCGAGGAGATATCGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
......................CAGGAACGGCGAGGAGAT............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................................................................................................................................................................................................................................................................................................CCC---ATAAACTACAATCCGC............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TT--------CC------GAC------CGGGATCCC---ATA.........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............GTTGAGGTCCAGGAACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...............TGAGGTCCAGGAACGGCGAGGAGATA...........................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............TGAGGTCCAGGAACGGCGAGGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....CACGTTCGCGTTGAGGTCCA............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
droEre2
AGTTCACATTCGCGTGGATGTCCATGCAAGGCGCGGAGATATCGGAGAAGGTATGTTGGCAT----------------------------------------------------------------------------------------GTAATTGAAAAATGCTGAAGACAACGGAATTTAGCTT----------------------TCTTAGCTAGCACTCT-----------------TAAATAGAAATT-------------TAT-----TCCCATTG-TTGTTAATTCAAGCAAGAATG--GACATTAACGCCTAGCTT-ATATGCATTTTACAGTT--GATGATGATA--------CC------GAC------CTGGAACCC---GTACACTACGATCCGGA--------------A------CCACCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................GATGTCCATGCAAGGCGCGGA...............................................................................................................................................................................................................................................................................................................................................................................................................2112.0021000010
..........................................................................................................................................................................................................................................................................................................................................................ATGATGATA--------CC------GAC------CTGGAACCC---............................................2312.0020200000
.............GTGGATGTCCATGCAAGGCGCGGA...............................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000110
..............................GCGCGGAGATATCGGAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
................GATGTCCATGCAAGGCGCGGAG..............................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ACACTACGATCCGGA--------------A------CCA...1911.0010000100
.............GTGGATGTCCATGCAAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
............................................................................................................................................................................................................................................................................................................................................................GATGATA--------CC------GAC------CTGGAACC................................................2011.0010100000
...............GGATGTCCATGCAAGGCGCGGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
...................GTCCATGCAAGGCGCGGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
............................................................................................................................................................................................................................................................................................................................................................GATGATA--------CC------GAC------CTGGAACCC---............................................2111.0010100000
...................................................................................................................................................................................................................................................................................................................................................AGTT--GATGATGATA--------CC------GAC------CTGGAACCC---............................................2811.0010100000
................GATGTCCATGCAAGGCGCGGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
............................................................................................................................................................................................................................................................................................................................................................GATGATA--------CC------GAC------CTGGAACCC---GTAC........................................2511.0010000010
droYak3
AGCTCACGTTCGCGTTACGATTCAAGAAAGGCGCGGCGATATCGGATCAGGTATGTTGAAGA---------------------------C-------------------------------------------------------------AAATTAAT-TA--------------------GGTCT----------------------TCTTTACAAGCAATCT-----------------TAAATAAAAGTT--------------GT-----TCCAATTG-TT-TAAATTCATATAAGAATACAGACTTTAACGCCCAACTT-ATGTGCACTTCACAGCC--GATGATGATT--------CT------GAT------CGGGATCCC---AGAACCTACATTCCGTC--------------A------CAACCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................ACGATTCAAGAAAGGCGCGGCGATATCGG.......................................................................................................................................................................................................................................................................................................................................................................................................2912.00200000000002
................ACGATTCAAGAAAGGCGCGGC...............................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...................................................................................................................................................................................................................................................................................................................................................AGCC--GATGATGATT--------CT------GAT------CGGGATCCC---............................................2811.00110000000000
.......................AAGAAAGGCGCGGCGATATCGG.......................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................GATGATGATT--------CT------GAT------CGGGATC.................................................2211.00100100000000
......................................................................................................................................................................................GGTCT----------------------TCTTTACAAGCAATCT-----------------TAAAT.............................................................................................................................................................................................2611.00100000000001
..................................................................................................................................................................................................................................................................................................................................................CAGCC--GATGATGATT--------CT------GAT------C.......................................................2111.00100100000000
droEug1
ACGCCACGTTCGCGTAGAGGTCCAACAGAAACGTGGTGACATATCAGAAGGTGAGTCTGGT-----------------------------------------------------G-------------AAACCTGTCCGTATGCTGAGTA--------ACTAATA------A--------------TTAATCTTAAT--------------------------CTTTA-------------------------------------------------------------------------------------------------------TATTTCACAGTG--GATGCAGATT--------CC------GAT------TCGAATA----------------------ATCCGTACTAT----------CCAACGSizeHit CountTotal NormTotal
No Reads
droBia1
ACGCTATATTCGCGTGGAGATCCAAGAGAGGCGGGGTGACATTGGAGGAGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ACAATACATTCGCGTGGAGGTACAACCCAGACGGGGTGACGTCGGTGCAGGTGAGTTCGGTTTCTTTACCATGTAGTAGTTACCTTTAGTTGAACGCGAATTCTTCAGAACAAAA-------------GAAAGTTTCTTTATACAAAGCC--------ATATATA------T--------------TGATTCGTAAA--------------------------CCATATTTTTAGGAGGAGA-----------------------------------------------------------------------------------------------------------------TGACAATG------GTGAT------GTCGATACCCGA----------------CAG--------------------CCTCCSizeHit CountTotal NormTotal
No Reads
droEle1
TAAATCCGTGCGCGTGGAAGTTCAGCCCAAACGGGGCGACATCGGAGGAGGTGAGTCCTTTC---------------------------A------------------------G---------------------CC-------AGGATATGTTTTAAAATAA----------------------C----------------------AATCGACAAATACTCA-----------------GTCATAGAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AGCCTACATTAATGTGGAAATTAAGCCCAAACGGGGCGACATCGGAGGAGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GTTCCACGTGCGCGTGGACGTGCAGCCCAAGAGGGGTGACATCGGAGCAGGTGAGTCAACAG---------------------------T------------------------T-------------GAAACGAACC----AAGAAA--------C---TG--------------GGTTTCAAGGT----------------------TCGGGGTTT--------------------------AATACGCATGTTTAAGGAAATTTTATAGTTCGTCAATCATATGTCAACTCATCCCAGACTA--AGTTCGAAAGCTCCTTTTTAACTCCG-TTTACATTTACAATCAAGATT--------CCGACGTGGAA------ACCGATCCCAGG----------------CTGCCCTACTCC----------CCCACGSizeHit CountTotal NormTotal
No Reads
droKik1
GCGCAGCGTCCGTGTTGAGGTCAATCCCAAGCGCGGCGATGTGGGAATACGTAAGAGTTTTT---------------------------C------------------------GGATAAATACAT----------CT-------TCCACTTGTCT-----------------------------------------------CTC----ATTGTTATC----TCTTTTTTTTCCTAGATGA-----------------------------------------------------------------------------------------------------------------CGACGACGAT------GGC------CATAATCA-----GGGACT-GGATCCTGG--------------A------CAGCTTSizeHit CountTotal NormTotal
No Reads
droAna3
GGCCACCGTTCGTGTGGATGTCCGTCCCAAGCGCGGAGACATCGGAATAGGTAGGGAGTTCA---------------------------C------------------------CCATCGACTTAT----------CC-------GGAATATGTAT-------------------------------------------------------AGAGTCTGTA----TCCTTCTTCGTAGGCGA-----------------------------------------------------------------------------------------------------------------TCCCGACT------CGGAAACCAACCCGGATCCCT--ACGAACCGCATCCCTAC--------------CCGGA--TCCCTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................ATCCCT--ACGAACCGCATCCCTAC--------------CC...........2512.002020000
..................................................................................................................................................................................................................................................................................................................................................................................................CCCT--ACGAACCGCATCCCTAC--------------CC...........2312.002020000
...CACCGTTCGTGTGGATGTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................2012.002020000
.......................GTCCCAAGCGCGGAGACATCGGAAT....................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................TCCCT--ACGAACCGCATCCCTAC--------------CCG..........2511.001010000
............TGTGGATGTCCGTCCCAAGCGCGGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................ACCGCATCCCTAC--------------CCGGA--TC....2011.001100000
................GATGTCCGTCCCAAGCGCGGAG..............................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................GATCCCT--ACGAACCGCATCCC..............................2111.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................CT--ACGAACCGCATCCCTAC--------------CC...........2111.001010000
....................................................................................................................................................................................................................................................................................................................................................................................AAACCAACCCGGATCCCT--ACGAACC.....................................2511.001010000
.......................................................................................................................................................................................................................................................................................................................................................................GACT------CGGAAACCAACCCGGATCC................................................2311.001010000
...................................GAGACATCGGAATAGGCG...............................................................................................................................................................................................................................................................................................................................................................................................1850.201010000
...................................GAGACATCGGAATAGGCGA..............................................................................................................................................................................................................................................................................................................................................................................................19200.102000011
droBip1
GGCCACCATTCGCGTGGACGTTCGCCCCAAGCGTGGTGACATCGGAATAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
GCGCAGCGTTCGAGTGGATATTCAGCCGAAACGCGGAGACATCAGTGATAGTAAGAGATTAT---------------------------G------------------------AA----------ATGAGAC---------TTGGAA--------AGAAGATTCTT------------------------------------AT--CA-----GCAAAATATCTTCCTCTTCCTTAGATGA-----------------------------------------------------------------------------------------------------------------TGGCGATG------TGGAT------CATGGACCCTAC----------------CAA--------------------ACCGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................GA-----------------------------------------------------------------------------------------------------------------TGGCGATG------TGGAT------CATGGACC................................................2311.0010100000000
...........................GAAACGCGGAGACATCAGT......................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010000000
..........................CGAAACGCGGAGACATCAGTG.....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
..............................................................................................................................................................................................................................................ATGA-----------------------------------------------------------------------------------------------------------------TGGCGATG------TGGAT------CATG....................................................2111.0010100000000
..................TATTCAGCCGAAACGCGGA...............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......................CAGCCGAAACGCGGAGAC............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100000
.............GTGGATATTCAGCCGAAACGCGGAGAC............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000001
.......................................................................................................................................................................................................................................................................................................................................................................GATG------TGGAT------CATGGACCCTAC----------------CAA--------------------ACC..2711.0010010000000
..........CGAGTGGATATTCAGCCGAAACGCGGA...............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
..............................................................................................................................................................................................................................................ATGA-----------------------------------------------------------------------------------------------------------------TGGCGATG------TGGAT------CA......................................................1911.0010000010000
droPer2
GCGCAGCGTTCGAGTGGATATTCAGCCGAAACGCGGAGACATCAGTGATAGTAAGAGATTAT---------------------------G------------------------AA----------ATGAGAC---------TTGGAA--------AGAAGATTCTT------------------------------------AT--CA-----GCAAAATATCTACCTCTTCCTTAGATGA-----------------------------------------------------------------------------------------------------------------TGGCGATG------TGGAT------CATGGACCCTAC----------------CAA--------------------ACCGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................GATG------TGGAT------CATGGACCC...............................................1814.004400000
.............................AACGCGGAGACATCAGTG.....................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
....................................................................................................................................................................................................................................................................................................................................................................GGCGATG------TGGAT------CATGGACCCTAC----------------C...........................2512.002200000
...............GGATATTCAGCCGAAACGCGGA...............................................................................................................................................................................................................................................................................................................................................................................................................2212.002101000
................................................................................................................................................................................................................................................GA-----------------------------------------------------------------------------------------------------------------TGGCGATG------TGGAT------CATGGACC................................................2311.001100000
................................................................................................................................................................................................................................................GA-----------------------------------------------------------------------------------------------------------------TGGCGATG------TGGAT------CATGGACCCTAC----------------CA..........................2911.001100000
.......................................................................................................................................................................................................................................................................................................................................................................GATG------TGGAT------CATGGACCCT..............................................1911.001001000
.............GTGGATATTCAGCCGAAAC....................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
.......................................................................................................................................................................................................................................................................................................................................................................GATG------TGGAT------CATGGACCCTAC----------------C...........................2211.001100000
GCGCAGCGTTCGAGTGGATATT..............................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
....................TTCAGCCGAAACGCGGAGACATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
droWil2
GCGTTCGATACGCGTGGAAGTGAAACCAAAACGTGGTGATATACCCGAGGATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTGATG------TTGAG------AT------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................GATATACCCGAGGATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGT.............................................................................21110.001000190
........................................ATACCCGAGGATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGT.............................................................................1816.00600060
.....................................GATATACCCGAGGATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTGAT..........................................................................2415.00500050
.....................................GATATACCCGAGGATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG...............................................................................1912.00200020
......................................ATATACCCGAGGATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGT.............................................................................2012.00200020
..........CGCGTGGAAGTGAAACCAAAACGTG.................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
.......ATACGCGTGGAAGTGAAACC.........................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...............................CGTGGTGATATACCCGAGGATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGT.............................................................................2711.00100010
.........................................TACCCGAGGATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTGATG------TTGAG------........................................................2611.00100001
........TACGCGTGGAAGTGAAACCAAAACGT..................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
..........CGCGTGGAAGTGAAACCA........................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
....................................TGATATACCCGAGGATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGT.............................................................................2211.00100010
..................................GGTGATATACCCGAGGATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGT.............................................................................2411.00100010
.......................................TATACCCGAGGATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG..............................................................................1811.00100010
......................................ATATACCCGAGGATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTGAT..........................................................................2311.00100010
.....................................GATATACCCGAGGATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T................................................................................1811.00100010
.......................................TATACCCGAGGATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGT.............................................................................1911.00100010
..GTTCGATACGCGTGGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
............................................CCGAGGATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTGATG------TT.................................................................2011.00100010
................................GTGGTGATATACCCGAGGATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGT.............................................................................2611.00100010
...................................GTGATATACCCGAGGATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGT.............................................................................2311.00100010
droVir3
GCGCACCATACGCATCGATGTGCAGCCCAAGCGCGGCGATATTGGTGACTGTAAGTGGCTGA---------------------------C------------------------C-------------AACACTGGCC-------GTGAAA-----C---GGTTAACAACAC--------------TG----------------------CTTGACATT----CTTTTTGCTTTGCAGCTGA-----------------------------------------------------------------------------------------------------------------CGGCGATG------TGGAA------CACGATCCCTAT----------------CAGCAGCCATATTACCCACAGCCGCCCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................AGCCCAAGCGCGGCGATATTGGT......................................................................................................................................................................................................................................................................................................................................................................................................2312.002001100000000000000000000000000000000000000000000000000000000000
..........................CCAAGCGCGGCGATATTGGTGACTC.................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................ATCCCTAT----------------CAGCAGCCATATTACC............2411.001000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................A------CACGATCCCTAT----------------CAGCAGC.....................2011.001000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................CACGATCCCTAT----------------CAGCAGC.....................1911.001000100000000000000000000000000000000000000000000000000000000000
......CATACGCATCGATGTGCAGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................CGGCGATG------TGGAA------CACGATCCCT..............................................2311.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................T----------------CAGCAGCCATATTACCCACA........2111.001000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................G------TGGAA------CACGATCCCTAT----------------C...........................1911.001000000000000000000001000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TG------TGGAA------CACGATCCCTAT----------------CAGCAGCC....................2711.001000000000000000000000000000000000000000000000000000000000001000
.......................AGCCCAAGCGCGGCGATATTGGC......................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................CGATCCCTAT----------------CAGCAGCC....................1811.001000000000000000000000000000000000000010000000000000000000000000
droMoj3
GCGGGCCGTACGCATCGATGTGAAGCCCAAGCGAGGTGACATCGGTGATCGTAAGTAGCTCA---------------------------G------------------------CC------------AACAC---------GCTGTT--------CAACACTTTACAACAC--------------TA------CACCTCTCTCTCT--CTCTCGCTCCCTCTCTCACTCTCTTACAGGCGA-----------------------------------------------------------------------------------------------------------------TGGCGATG------TGGAG------CGCGATCCCTAT----------------CTGCC----------G------CAATACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................G------TGGAG------CGCGATCCCTAT----------------CTGCC----------.............2311.001000100
...........................CAAGCGAGGTGACATCGGT......................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
................................................................................................................................................................................................................................................GA-----------------------------------------------------------------------------------------------------------------TGGCGATG------TGGAG------CGCGATCCCTA.............................................2611.001100000
................GATGTGAAGCCCAAGCGAGGTGA.............................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
droGri2
GGCCAGCATTCGCATCGAAGTCCAACCCAAGCGCGGCGATATCGGTGACGGTGAGTGTAA-------------------------------------------------------A----------ATACAGT---------CCAGTT--------CAAGAATTCAT--------------------------------------------TGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................AGCGCGGCGATATCGGTGAC...................................................................................................................................................................................................................................................................................................................................................................................................2012.00211
.............................AGCGCGGCGATATCGGTGACG..................................................................................................................................................................................................................................................................................................................................................................................................2112.00202
...................GTCCAACCCAAGCGCGGC...............................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
..CCAGCATTCGCATCGAAGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101
...........................CAAGCGCGGCGATATCGGT......................................................................................................................................................................................................................................................................................................................................................................................................1911.00101
...........GCATCGAAGTCCAACCCAAGCGC..................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101
..........................CCAAGCGCGGCGATATCG........................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
.......ATTCGCATCGAAGTCCAACC.........................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
............CATCGAAGTCCAACCCAAGCGCGGC...............................................................................................................................................................................................................................................................................................................................................................................................................2511.00101
.......................AACCCAAGCGCGGCGATATCGGTGACG..................................................................................................................................................................................................................................................................................................................................................................................................2711.00101
.............................AGCGCGGCGATATCGGTGACGC.................................................................................................................................................................................................................................................................................................................................................................................................2211.00101
.....................CCAACCCAAGCGCGGCGATATCGGTGA....................................................................................................................................................................................................................................................................................................................................................................................................2711.00101
................GAAGTCCAACCCAAGCGCGGC...............................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
............................AAGCGCGGCGATATCGGTGACG..................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
......................CAACCCAAGCGCGGCGATATCG........................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
..................AGTCCAACCCAAGCGCGG................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
..............................GCGCGGCGATATCGGTGAC...................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
...........................CAAGCGCGGCGATATCGGTGA....................................................................................................................................................................................................................................................................................................................................................................................................2111.00101
................GAAGTCCAACCCAAGCGCGGCGATATCG........................................................................................................................................................................................................................................................................................................................................................................................................2811.00110
........................ACCCAAGCGCGGCGATATCGGTGACG..................................................................................................................................................................................................................................................................................................................................................................................................2611.00110

Generated: 05/19/2015 at 03:22 AM