ID:dsi_10954 |
Coordinate:3l:7717325-7717385 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3l_7717214_7717324_-]; CDS [3l_7717214_7717324_-]; CDS [3l_7717386_7718327_-]; exon [3l_7717386_7718327_-]; intron [3l_7717325_7717385_-]
No Repeatable elements found
| ##################################################-------------------------------------------------------------################################################## TAAAGAAATTGTGCAACCAGATTGCAGCCCACACCTGCCGTACTGATGCGGTAAGTGTTTGCATACACAGTTTAATATTCTGGAATTTATGTTTTTATTATTGTTGTGCAGGACAAACTTTTGATTTGTCGTACCTCCCAGGAACTGGAGGTGGACATAAG **************************************************........(((((((.(((((..((((....(((((....)))))))))))))))))))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553485 Chicharo_3 day-old ovaries |
SRR902008 ovaries |
SRR553486 Makindu_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
SRR553487 NRT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................TGATTTGTCGTACCTCCCAGGAGCTGGAG........... | 29 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................................................................AACTTTTGATTTGTCGTACCTCCCAGGAGC................ | 30 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................TCCCAGGAACTGGAGGTGGACATAAA | 26 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...................................................................................................................AACTTTTGATTTGTCG.............................. | 16 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................TCCCAGGAACTGGAGGTGGACA.... | 22 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..............................................TGCGGTAAGTGTTGGCA.................................................................................................. | 17 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ............................................................................................................................................GGAACTGTAGGTGGA...... | 15 | 1 | 20 | 0.40 | 8 | 0 | 0 | 0 | 8 | 0 | 0 |
| .....................................................................................................TGTTGTGCCGGACAA............................................. | 15 | 1 | 13 | 0.08 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ............GCAACCAGATGGCAGCGGAC................................................................................................................................. | 20 | 3 | 17 | 0.06 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
|
ATTTCTTTAACACGTTGGTCTAACGTCGGGTGTGGACGGCATGACTACGCCATTCACAAACGTATGTGTCAAATTATAAGACCTTAAATACAAAAATAATAACAACACGTCCTGTTTGAAAACTAAACAGCATGGAGGGTCCTTGACCTCCACCTGTATTC
**************************************************........(((((((.(((((..((((....(((((....)))))))))))))))))))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553487 NRT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|
| ........................................................................................................ACAGGTCTTCTTTGAAAACTAAA.................................. | 23 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ...............................................................ATGTGCCAAATTCTAAGA................................................................................ | 18 | 2 | 6 | 0.17 | 1 | 0 | 1 | 0 |
| ...................................................................................................................................ATGGAGGGTCCTTATGCT............ | 18 | 3 | 20 | 0.05 | 1 | 0 | 0 | 1 |
Generated: 04/24/2015 at 10:27 AM