ID:

dsi_10943

 Coordinate:

x:9126652-9126801 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.2 -3.9 -3.5 -3.5

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CGCAAATTGTGCACGCGAGGCGCAGCAGGGACGTCGGATCTTAACTATCGGTTTGTGTTGCTTACTTTGCGGCAAATTTAATGAAACCAATTGCCGATATACTGAGAAAAATAGCATAATTAAATAACCAGATCCAACGCATCTAGTGTAAAAAGTCGGGCATTATTCCCAATCGCAAAAGAGAGAGAATCGGAATCACTCGCTGACCCGTCTCGTTCGAGTCTTAATCGCGGTATCTCGCTTGCACTCA
********************************************************************************************************************************************((((...............(((((......))).))...............)).))****************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 M024
male body		 M025
embryo
 SRR618934
dsim w501 ovaries
 M053
female body
 O002
Head
 SRR902009
testis
............................................................................................................................................ATCTAGTGTAAAAAGTCGGGC......................................................................................... 21 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0
............................................CTATCGGTTTGTGTTGCTTACT........................................................................................................................................................................................ 22 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0
................................................................................................................................................................................AAAAGAGAGAGAATCGGAAT...................................................... 20 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0
......................................................................................CCAATTGCCGATATACTGAGA............................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TCTAGTGTAAAAAGTCGGGCATTA..................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................................................................GCTGACCCGTCTCGTTCG............................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.......................AGCAGGGACGTCGGATCTTAA.............................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................CTTTGCGGCAAATTTAATGA...................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...........................................ACTATCGGGTTGTGTTGCTTA.......................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
...........................................ACTATCGGTTTGTGTTGCTTA.......................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................GTGTAAAAAGTCGGGCATTAT.................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................GCTTACTTTGCGGCAAATTTA.......................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1
.......TGTGCACGCGAGGCGCAGCAGGGT........................................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.........................................TAACTATCGGTTTGTGTTGCT............................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................AGGCGCAGCAGGGACGTCGGAT................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
...................................GGATCTTAACTATCGGTTTGT.................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
....................................................TTGTGTTGCTTACTTTGCGGC................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
............................................CTATCGGTTTGTGTTGCTTAC......................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................TGCGGCAAATTTAATGAAACC.................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.................................TCGGATCTTAACTATCGGTTT.................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................GTGAAAAAAGTCGGGCATTAT.................................................................................... 21 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
........................GCAGGGACGACGGAT................................................................................................................................................................................................................... 15 1 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................CGATGTACTGAGAAA............................................................................................................................................. 15 1 19 0.05 1 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

GCGTTTAACACGTGCGCTCCGCGTCGTCCCTGCAGCCTAGAATTGATAGCCAAACACAACGAATGAAACGCCGTTTAAATTACTTTGGTTAACGGCTATATGACTCTTTTTATCGTATTAATTTATTGGTCTAGGTTGCGTAGATCACATTTTTCAGCCCGTAATAAGGGTTAGCGTTTTCTCTCTCTTAGCCTTAGTGAGCGACTGGGCAGAGCAAGCTCAGAATTAGCGCCATAGAGCGAACGTGAGT
******************************************************((((...............(((((......))).))...............)).))******************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 O002
Head
 M053
female body
 O001
Testis
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
...............................................................................................................................GGTCTAGGTTGCGTAGATCACA..................................................................................................... 22 0 1 5.00 5 2 0 0 3 0 0 0 0 0 0 0 0
...........................................................................................ACGGCTATATGACTCTTTTTA.......................................................................................................................................... 21 0 1 2.00 2 0 0 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................CGACTGGGCAGAGCAAGCT.............................. 19 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
...................CGCGTCGTCCCTGCAGCCTAG.................................................................................................................................................................................................................. 21 0 1 2.00 2 0 0 0 0 1 0 0 1 0 0 0 0
..................................................................................................................................CTAGGTTGCGTAGATCACA..................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................CCCTGCAGCCTAGAATTGATA.......................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................CAGCTATATGACTCTTTTTAT......................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................GCCGCGTCGTCCCTGCAGCCT.................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................TTTGGTTAGCGGCTATATGAC.................................................................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................CTAGAATTGATAGCCAAACAC................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................CGTCGTCCCTGCAGCCTAGAA................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................GTACCTGCAGCCTAGAATTGG............................................................................................................................................................................................................ 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GGTCTAGGTTGCGTAGATCAC...................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TGGTCTAGGTTGCGTAGATCACA..................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................ATTACTTTGGTTAACGGCTAT....................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................AACGGCTATATGACTCTTTTT........................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................CGTCCCTGCAGCCTAGAATTG............................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................TTTGGTTAACGGCTATATGAC.................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.................CCCGCGTCGTCCCTGCAGCCT.................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................ATTGATAGTCAAACACAACGA............................................................................................................................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................GATCACATTTTTCAGCCCGTA....................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..................CCGCGTCGTCCCTGCAGCCTA................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................ATTTATTGGTCTAGGTTGCGT............................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........ACGTGCGCTCCGCGTCGTC.............................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................TGGTCTAGGTTGCGTAGATCA....................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................CCTGCAGCCTAGAATTGATAG......................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................GCTATATGACTCTTTTTATCGTA..................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................GTCTAGGTTGCGTAGATCACA..................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GGGTCTAGGTTGCGTAGATCA....................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CGGCTATATGACTCTTTTTAT......................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................TGAAACGCCGTTTAAATTACT...................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................GTCTAGGTTGCGTAGGTCACA..................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................TCGGCTATATGACTCTTTTTAT......................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................CGTGCAGCTTAGAGTTGATA.......................................................................................................................................................................................................... 20 3 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0
............................CCTGCAGCCTAAATTTG............................................................................................................................................................................................................. 17 2 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................ATAGCCAAACTCAACG............................................................................................................................................................................................. 16 1 19 0.11 2 0 2 0 0 0 0 0 0 0 0 0 0
..........................TTCCTGCCGCCTAAAATTG............................................................................................................................................................................................................. 19 3 13 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................AGAGTGCGAACGTGAGT 17 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................AGAGACGGACTGGGCAGAG.................................... 19 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................TAGGTTGCGAATCTCACA..................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
................................................................................................................................................................................................................................ATGAGCGCCTTAGAGC.......... 16 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................AGCCTTAGTCAGCGA.............................................. 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:9126602-9126851 - dsi_10943 CGCAAATTGTGCACGCGAGGCGCAG-CAGGGACGT-----------CGGATCTTAAC----TA----TCGGTTTGTGT--------TGCTTACT------TTGCGGCAAATTTA-ATGAAACCAATTGCCGAT----------A----------TACTGAGA-AAAATAGCATAATTAAATAACCAG-------------------ATCCAACGCAT-----CTAG-TG-TAAAA--AGTCGGGCAT-TATTCCCAATCGCAAAA-----------------------------------------------GAG---AGAGAATCG------------G-----------AATCACTCGCTGAC--CCGTCTCGTTCGAGTC--TTAATCGC----------GGTATCTCGCTTGCACTCA
droSec2 scaffold_15:344658-344907 - CGCAAATTGTGCACGCGAGGCGCAG-CAGGGACGT-----------CGGATCTTAAC----TA----TCGGTTTGTGT--------TGCTTACT------TTGCGGCAAATTTA-ATGAAACCAATTGCCGAT----------A----------TACTGAGA-AAAATAGCATAATTAAATAACCAG-------------------ATCCAACGCAT-----CTAG-TG-TAAAA--AGTCGGGCAT-TATTCCCAATCGCAAAA-----------------------------------------------GAG---AGAGAATCG------------G-----------AATCACTCGCTGAC--CCGTCTCGTTCGAGTC--TTAATCGC----------GGTATCTCGCTTGCACTCA
dm3 chrX:9580812-9581061 - CGCAAATTGTGCACGCGAGGCGCAG-CAGGGACGT-----------TGGATCTTAAC----TA----TCGGTTTGTGT--------TCCTTACT------TTGCGGCAAAATTA-ATGCAACCAATTGCCGAT----------A----------TACTGAGA-AAAATGGCATAATTAAATAACCAG-------------------ATCCAACGCAT-----GTAG-TG-TAAAA--AGTCGGGCAT-TATTCCCAATCGCAAAA-----------------------------------------------GAG---AGAGAATCG------------G-----------TATCACTCGCTGAC--CCGTCTCGTTCGAGTC--TTGATCGC----------GGTATCTCGCTTGCACCCA
droEre2 scaffold_4690:5536850-5537095 + CGCAAATTGTACACGCGAGGCGCAG-CAGTGACGT-----------TGGATTGGAAC----TA----TCGGTTTGTGT--------GACTTATT------TTGTGGCATATTTA-ATGCGGCCAATTGCCGAT----------A----------AACCGAAG-AAAATAGCATAATTAAATAACCAG-------------------AGCCAGCGCAT-----CTAG-TG-TAAAA--AGTCGGGCAT-GATTCCCAATCGCAAG------------------------------------------------------AGAGAATCG------------G-----------TATCACTCGTTGAC--CCGTCTCGTTCGAGTC--TCGATCGC----------GTCATCTCACTCGCACCCA
droYak3 X:18172485-18172735 - CGCAAATTGTGCACGCGAGGCGCAGCCAGTGACGT-----------TGGATCGGAAC----TA----TCGGTTTGTGT--------GGCTTATT------TTGCGGCAAATTTA-ATGCGGCCAATTGCCGAT----------A----------TACCGAGG-AAAATAGCATAATTAAATAACCAG-------------------AGCCAGCGCAT-----CTAG-TG-TAAAA--AGTCGGGCAT-GATTCCCAATCGCAAAA-----------------------------------------------GAG---AGAGAATCG------------G-----------TATCACTCGCTGAC--CCGACTCGTTCGAGTC--TCGATCGC----------GGCATCTCACTCGCACCTA
droEug1 scf7180000409032:340127-340392 + CGCAAATTGTACACGCGAGGCGCAG-CAGTGACGT-----------TGGATCGGATC----TA----TCGGTTAGTGT--------GGCGTGTT------TTGCGGCAAATTTA-ATGCCGCCGATTGCCAAT----------G----------TCCCGAGG-AAAATAGCATAATTAAATAACCAG-------------------AGCCAGCGCAT-----CTAG-TG-TAAAA--AGTCGGGCAT-TATTCCCAATCGCAAAA-----------------------------------------------GAG---AGAGAATCGAAT-CG------AACTCATCTCTCGTTGACTCGTTGAC--CCGTCTCGTTCGAGTC--TCGCTTGT----------GCTATCACTTTCGCACTTA
droBia1 scf7180000301760:5571722-5571970 - CGCAAATTGTACACGCGAGGCGCAG-CAGTGGCGT-----------TGGATCAGAAC----TA----TCGGTTGGTGT--------GGCGTGCC------TGGCGGCGGACTTA-GAGCCGCCGATGGGCCGT----------G----------TGCCGAGG-AAAATAGCATAGTTAAACAACCAG-------------------AGCCAGCGCAT-----CTAG-TG-TA-AA--AGTCGGGCAT-TATTCCCAATCGCAGAG-----------------------------------------------GAG---AGTCA----------------------TCTCTCGCCGACTCGCTGGC--CCGACTCGCTGGA-TC--TCGTTCGC----------GCCGTCTCGCTCACACTCG
droTak1 scf7180000415872:217413-217690 - CGCAAATTGTACACGCGAGGCGCAG-CAGTGACGTT----------TGGATCGGAAC----TA----TCGGTTTGTGT--------GGCGTGCT------GGGCGGCAAATTTA-ATGCCGCCGATTTGCAAT----------G----------TCCCGAGG-AAAATAGCATAATTAAATAACCAG-------------------AGCCAGCGCATCTCATCTAG-TG-TTAAA--AGTCGGGCAT-TATTCCCAATCGCAAAA-----------------------------------------------GAGAAAAGAGAATCGAGTCCGAATCCAAA----TCTCTCGCTGACTCGCTGAC--CCGTCTCGTTGGAGTC--TCGCTCGT----------GTCATCTCCGTCGCACCCA
droEle1 scf7180000491013:410803-411036 - CGCAAATTGTACACGCGAGGCGCAG-AAGTGACAT-----------CG--TCGGATC----AA----TCGGTTTGTAT--------GGCGTGTT------TTGAGGCAAACTAA-ATGCAGTCGATTGCCAAT----------G----------TCCCGGAA-AAAATAGCATAATTAAATAAT----------------------AACCAGCACAT-----CTAG-TG-TAAAA--AGTCGAGCATTTATTCCCAATCGCAAAA-----------------------------------------------GAG--------------------------------------GCACTCGCTGAC--CCGTCTCGTTCGAGTC--CCAGTCGT----------GCCATCCTACTTGCACCCA
droRho1 scf7180000780080:504267-504500 + CGCAAATTGTACACGCGAGGCGCAG-CAAAGACAT-----------CG--TCGGATC----AA----TCGGTTTGTAA--------GGCGTGTT------TTGAGGAAAATTAA-ATGCCGTCGATTGCCAAT----------G----------TTCCGAGA-AAAATAGAATAATTAAATAAT----------------------AACCAGCGCAT-----CTAG-TG-TAAAA--AGTCGGGCATTTATTCCCAATCGCAAAA-----------------------------------------------GAG--------------------------------------GCACTCGCTGAC--CCGTCTCGCTCCAGTC--TCGTTCGT----------GCCATCCCGCTTGCACTCA
droFic1 scf7180000454073:2513112-2513366 - CGCAAATTGTACACGCGAAGCGCAG-CAGTAACGT-----------CG--TCGGATC----TA----TCGGTTGGTGT------TTTACGTGCT------TTACGGCAAAATAA-ATGCCGCCGATTGCCAAT----------G----------CCCCGGGA-AAAATATCATAATTAAATAACCAG-------------------AGCCAGCGCAT-----CTAG-TGTTAAAA--AGTCGGGCATTTATTCCCAATCGCAAAA-----------------------------------------------GAG---AG--AACCA------------AA----TCTC--TGGCACTCGCTGAC--CCGTCTCGCTTGAGTC--TGGCGCGT----------GCTATCTCGCTTGCACTCA
droKik1 scf7180000302592:699540-699765 + CGCAAATTTAACACGCGAGACACAGCCAGTGA--------------TGGATCAGCCCTTGCTA----TAAAGGTGTGT-----T-TTTAAAGGCTCCGTGGAGCGGCAAATAAA-ATGCCGCAGATTGG-AAT----------T----------GGCGGAGA-AAAA-----GAATTAAATAAT-------------------------------------------AA-TAAAA--AGTCGGGCAT-AATTCTGAATCTCG-------------------------------------------------------------------------------------------CAACTCGCTGAC--GCGTCTCGCTGGAGTG--TCGCTCACTGACTCAGCCTGCATCCCGCTCGCACG--
droAna3 scaffold_13248:1391776-1392057 - CGCAAATT-TACTCGCGAGGCGCAACCAGTGACGTCGTC----------GTCGGGGC----TTTTTTTCAGTGCGTGAGTG-CT-TTTTTAGCC------GACCGGCAAATTTTTATTCCT----------AA----------AA---------ATTGGGAT-AAAGAAAAATAATAAAATAACTAGTAGGC---------------GCCACCG-----------G-AC-ATAAA--AGTCGGGCAT-TATTCTGA------------TA-TTTCGATGGAAAATGATTTTTTTTTTTT---------CTGAG--AGAAGAGAACCA------------GACCTCGCAC--TCGCACTCGCTGTC--GCGTCTCGCTGGAT-G----GGTC-T----------GCCGGCCCGCCTGCACGCA
droBip1 scf7180000396571:215578-215861 + CGCAAATT-TACTCGCGAGGCGCAACCAGTGACGTCGTC----------GTCGGGGC----TTTTTTTCAGTGCGTGAGTG-CT-TTTTTAGCC------GACCGGCAAATTTTTATTCCTTAAATT----------------G----------GGCT-AGAAAAA-----ATAATAAAATAACTAGTAGGC---------------GCCACCGGA-----------CA-T-AAA--AATCGGGCAT-TATTCTGC------------TA-TTTCGATTGAAAATGATTTTTTTTTTTTTT--GGA--CTGAG--AGAAGAGAACCA------------GACC--------TAGCACTCGCTGACTCGCGTCTCGCTGGAT-GGGTCGTC--T----------GCCGGCCCGCCTGCACGCA
dp5 XL_group3a:806975-807281 - CGCAAAAATTACACGCGAGCCCCGAAACGTGACGTAGTCGTGACGTTAG------------------------------TAGA-CTTGCAAGGC------AGCCGGCGAAACGT-ATGTAGAAGATCAC-ACTTGGTCGCATTTAATGGCGCACTACC------AAAGAATAGAATTTAATAATTGG-------------------A-CAAATGCAT-----TTAAACG-TAAAATATGCTGGGCAT-TATGCCCAATCGTTACTGGACATTTTGGACAGAAAATGATATTTTTCTCAGCAGCGCACTCT----C---AGAGAATCC------------------------ACTCACTCGCTGAC--CGGACTCGTTCGAGTG--CG--TCACG---CCA---GCTGGCCCGCTTACACGCA
droPer2 scaffold_15:2090167-2090487 + CGCAAAAATTACACGCGAGCCCGAA-ACGTGACGTAGTCGTGACGTTAG------------------------------TAGA-CTTGCAAGGC------AGCCGGCGAATCGT-ATGTAGAAGATCAC-ACTTGGTCGCAATTAATGGGGCACTACC------AAA-----GAATTAACGAATAATTATATTCCATCGGTAATTGGACAAATGCAT-----TTAAACG-TAAAATATGCTGGGCAT-TATGCCCAATCGTTACTGGACATTTTGGACAGAAAATGATATTTTTCTCAGCAGCGCACTCT----C---AGAGAATCC------------------------ACTCACTCGCTGAC--CGGACTCGTTCGAGTG--CG--TCACG---CCA---GCTGGCCCGCTTACACGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGCAAATTGTGCACGCGAGGCGCAG-CAGGGACGT-----------CGGATCTTAAC----TA----TCGGTTTGTGT--------TGCTTACT------TTGCGGCAAATTTA-ATGAAACCAATTGCCGAT----------A----------TACTGAGA-AAAATAGCATAATTAAATAACCAG-------------------ATCCAACGCAT-----CTAG-TG-TAAAA--AGTCGGGCAT-TATTCCCAATCGCAAAA-----------------------------------------------GAG---AGAGAATCG------------G-----------AATCACTCGCTGAC--CCGTCTCGTTCGAGTC--TTAATCGC----------GGTATCTCGCTTGCACTCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................AT-----CTAG-TG-TAAAA--AGTCGGGC.................................................................................................................................................................................2112.00200000001100000000
........................................................C----TA----TCGGTTTGTGT--------TGCTTACT------..................................................................................................................................................................................................................................................................................................................................2212.00220000000000000000
.....................................................................................................................................................................................................................................................................AAAA-----------------------------------------------GAG---AGAGAATCG------------G-----------AAT....................................................................2012.00200200000000000000
.........................................................................................................................CCAATTGCCGAT----------A----------TACTGAGA-...................................................................................................................................................................................................................................................................2112.00200000000200000000
........................................................................................................................................................................................................................T-----CTAG-TG-TAAAA--AGTCGGGCAT-TA............................................................................................................................................................................2411.00100010000000000000
.......................................................................................................................................................................................................................................................................................................................................................................GCTGAC--CCGTCTCGTTCG...........................................1811.00100000010000000000
.......................AG-CAGGGACGT-----------CGGATCTTAA..............................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000010000
............................................................................................CT------TTGCGGCAAATTTA-ATGA...............................................................................................................................................................................................................................................................................................................2011.00100000001000000000
.......................................................AC----TA----TCGGTTTGTGT--------TGCTTA..........................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
.................................................................................................................................................................................................................................G-TG-TAAAA--AGTCGGGCAT-TAT...........................................................................................................................................................................2111.00100000000000010000
.......................................................................................GCTTACT------TTGCGGCAAATTTA-...................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.......TGTGCACGCGAGGCGCAG-CAGGGT......................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
.....................................................TAAC----TA----TCGGTTTGTGT--------TGCT............................................................................................................................................................................................................................................................................................................................................2111.00100000000100000000
.................AGGCGCAG-CAGGGACGT-----------CGGAT...................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
...............................................GGATCTTAAC----TA----TCGGTTTGT..........................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
........................................................................TTGTGT--------TGCTTACT------TTGCGGC...........................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
........................................................C----TA----TCGGTTTGTGT--------TGCTTAC.........................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
.....................................................................................................TGCGGCAAATTTA-ATGAAACC...........................................................................................................................................................................................................................................................................................................2111.00101000000000000000
..................................T-----------CGGATCTTAAC----TA----TCGGTTT............................................................................................................................................................................................................................................................................................................................................................2111.00100000000000010000
droSec2
CGCAAATTGTGCACGCGAGGCGCAG-CAGGGACGT-----------CGGATCTTAAC----TA----TCGGTTTGTGT--------TGCTTACT------TTGCGGCAAATTTA-ATGAAACCAATTGCCGAT----------A----------TACTGAGA-AAAATAGCATAATTAAATAACCAG-------------------ATCCAACGCAT-----CTAG-TG-TAAAA--AGTCGGGCAT-TATTCCCAATCGCAAAA-----------------------------------------------GAG---AGAGAATCG------------G-----------AATCACTCGCTGAC--CCGTCTCGTTCGAGTC--TTAATCGC----------GGTATCTCGCTTGCACTCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................GATCTTAAC----TA----TCGGTTTGTG.........................................................................................................................................................................................................................................................................................................................................................2112.0020011
...........CACGCGAGGCGCAG-CAGGGA......................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
....................................................................................................................................................................................................................................................................CAAAA-----------------------------------------------GAG---AGAGAATCG------------G-----------AAT....................................................................2111.0011000
.............................................................................................................................................................TGAGA-AAAATAGCATAATTA....................................................................................................................................................................................................................................................2011.0010010
..............................................................A----TCGGTTTGTGT--------TGCTTACT------..................................................................................................................................................................................................................................................................................................................................2011.0011000
...............................................................................................................................................................................................................................................................AATCGCAAAA-----------------------------------------------GAG---AGAGAA..................................................................................................1911.0010001
...............CGAGGCGCAG-CAGGGACG....................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
.............................................................................................................ATTTA-ATGAAACCAATTGCCGAT----------A----------TAC.........................................................................................................................................................................................................................................................................2711.0011000
.....................................................................................................................................................................................................................................................................................................................................................................TCGCTGAC--CCGTCTCGTTCGA..........................................2111.0011000
...................................................................................................................................................................................................................................................................................................................................................G-----------AATCACTCGCTGAC--CCGTCTCG...............................................2311.0010010
.......................................................AC----TA----TCGGTTTGTGT--------TGCTTA..........................................................................................................................................................................................................................................................................................................................................2111.0010100
.GCAAATTGTGCACGCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
dm3
CGCAAATTGTGCACGCGAGGCGCAG-CAGGGACGT-----------TGGATCTTAAC----TA----TCGGTTTGTGT--------TCCTTACT------TTGCGGCAAAATTA-ATGCAACCAATTGCCGAT----------A----------TACTGAGA-AAAATGGCATAATTAAATAACCAG-------------------ATCCAACGCAT-----GTAG-TG-TAAAA--AGTCGGGCAT-TATTCCCAATCGCAAAA-----------------------------------------------GAG---AGAGAATCG------------G-----------TATCACTCGCTGAC--CCGTCTCGTTCGAGTC--TTGATCGC----------GGTATCTCGCTTGCACCCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................AGGCGCAG-CAGGGACGT-----------TGGA....................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000100
......................CAG-CAGGGACGT-----------TGGATCTT................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130000000000000000000000000000000000000000000000000000
................................................GATCTTAAC----TA----TCGGTTTGTG.........................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................AT-----GTAG-TG-TAAAA--AGTCGGG..................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CGAGGCGCAG-CAGGGACGT-----------TGG.....................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.........TGCACGCGAGGCGCAG-CAGGGA......................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000001000000000
..CAAATTGTGCACGCGAGGCGC...............................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000010000000000000000000000000000
............ACGCGAGGCGCAG-CAGGGACG....................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100100000000000000
...............CGAGGCGCAG-CAGGGACGT-----------TG......................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100001000000
........................................................................TTGTGT--------TCCTTACT------TTGCGGC...........................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................GTC--TTGATCGC----------GGTATCTCGCT........2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................ACCAG-------------------ATCCAACGCAT-----GTAG-TG-................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110
........................................................................................................................................................................................CAG-------------------ATCCAACGCAT-----GTAG-TG-T...............................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................AACCAG-------------------ATCCAACGCAT-----GTAG-...................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................TTGCCGAT----------A----------TACTGAGA-AAAATGGCA..........................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GCACGCGAGGCGCAG-CAGGGA......................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000
...............................................GGATCTTAAC----TA----TCGGTTTGT..........................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................................CAT-TATTCCCAATCGCAAAA-----------------------------------------------G.............................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................T-----GTAG-TG-TAAAA--AGTCGGGCA................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000
......................................................................................................................................................................................................................CAT-----GTAG-TG-TAAAA--AGTCGGG..................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000100000
...............................................GGATCTTAAC----TA----TCGGTTTG...........................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
..................................T-----------TGGATCTTAAC----TA----TCGGTT.............................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........CACGCGAGGCGCAG-CAGGGAC.....................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.....ATTGTGCACGCGAGGCGCAG-C...........................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CGCAAAA-----------------------------------------------GAG---AGAGAATCG------------G-----------.......................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.......................................................................................................................................................................................CCAG-------------------ATCCAACGCAT-----GTAG-TG-................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100000
.......................................................................TTTGTGT--------TCCTTACT------TTGCGGC...........................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000100000000000000000000000
.........................................................................TGTGT--------TCCTTACT------TTGCGGCA..........................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................AC----TA----TCGGTTTGTGT--------TCCTTA..........................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....ATTGTGCACGCGAGGCGC...............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
CGCAAATTGTGCACGCGAGGCGCAG-CAG.........................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................CGCAT-----GTAG-TG-TAAAA--AGTCGGG..................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................................ACCAG-------------------ATCCAACGCAT-----GTAG-...................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.GCAAATTGTGCACGCGAGGCGCAG-CAGG........................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................ATCACTCGCTGAC--CCGTCTCG...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AAATTGTGCACGCGAGGCGCAG-CAGGGA......................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................GT-----------TGGATCTTAAC----TA----TCGGT..............................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................CAAAA-----------------------------------------------GAG---AGAGAATCG------------G-----------.......................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....AATTGTGCACGCGAGGCGCAG-C...........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TAAATAACCAG-------------------ATCCAACGC...............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................G-TG-TAAAA--AGTCGGGCAT-TATA..........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................AATTGCCGAT----------A----------TACTGAGA-AA.................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................AAA-----------------------------------------------GAG---AGAGAATCG------------G-----------TATCACTCGCTG...........................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................GTGT--------TCCTTACT------TTGCGGTG..........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AG-CAGGGACGT-----------TGGATCTTAAC----T........................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................GCAAAA-----------------------------------------------GAG---AGAGAATCG------------...................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
....................................................TTAAC----TA----TCGGTTTGTGT--------TCCT............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
................................................................................................................TA-ATGCAACCAATTGCCGAT----------A----------............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
................................................................................................................................................................................TAAATAACCAG-------------------ATCCAACGCA..............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.GCAAATTGTGCACGCGAG...................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CAAATTGTGCACGCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
......................................................................................................................CAACCAATTGCCGAT----------A----------TACTGT......................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................CAACGCAT-----GTAG-TG-TAAAA--AGT......................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CGT-----------TGGATCTTAAC----TA----TCGGT..............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............GCGAGGCGCAG-CAGGGAAA....................................................................................................................................................................................................................................................................................................................................................................................................1921.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
.......................................................................................................................................................................................................................AT-----GTAG-TG-TAAAA--AGTCGGGCA................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...AAATTGTGCACGCGAGGCTT...............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AG-CAGGGACGT-----------TGGATCTAT...............................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CGCAAATTGTGCACGCGAGGCG................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................GAGGCGCAG-CAGGGACGT-----------TGGA....................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.................................GT-----------TGGATCTTAAC----TA----TCGGTT.............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................TTACT------TTGCGGCAAAATTA-A..................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGGCGCAG-CAGGGACGT-----------TGG.....................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................G-----------TATCACTCGCTGAC--CCGTC..................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.......................................................................................................................AACCAATTGCCGAT----------A----------TACTG.......................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
................................................GATCTTAAC----TA----TCGGTTTGT..........................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AAATTGTGCACGCGAGGCGCA..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
.........TGCACGCGAGGCGCAG-CAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................CAAAATTA-ATGCAACCAATTGCCG...................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CACTCGCTGAC--CCGTCTCGTT.............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................CAAAA-----------------------------------------------GAG---AGAGAATCG------------G-----------TATCA..................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................G-----------TATCACTCGCTGAC--CCGTCTCGTT.............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
..............GCGAGGCGCAG-CAGGGAC.....................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................G-CAGGGACGT-----------TGGATCTTAAC----TA----TCG................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TGTGCACGCGAGGCGCAG-CAGG........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................CCCAATCGCAAAA-----------------------------------------------GAG---AGAGAATCG------------G-----------.......................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................CCAATTGCCGAT----------A----------TACTGAGA-...................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
..CAAATTGTGCACGCGAGGCGCA..............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................ACCAG-------------------ATCCAACGCAT-----GTAG-T..................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TCTTAAC----TA----TCGGTTTGTGT--------TCC.............................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CGCGAGGCGCAG-CAGGGACG....................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TCGCTGAC--CCGTCTCGTTCGAGT........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................TAAC----TA----TCGGTTTGTGT--------TCCT............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................ATCG------------G-----------TATCACTCGCTGAC--CCG....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....AATTGTGCACGCGAGGCG................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................AATTGCCGAT----------A----------TACTGAGT-...................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........TGCACGCGAGGCGCAG-CAGGGAC.....................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................GCAAAA-----------------------------------------------GAG---AGAGAATCG------------G-----------.......................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.....ATTGTGCACGCGAGGCGCAG-CAGGGA......................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................CGCAAAA-----------------------------------------------GAG---AGAGAATCG------------G-----------T......................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TCGAGTC--TTGATCGC----------GGTAT..............2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................ATCACTCGCTGAC--CCGTC..................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...............................................................................................................................GCCGAT----------A----------TACTGAGA-AAAATG.............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........TGCACGCGAGGCGCAG-CAGGGAT.....................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................AACCAG-------------------ATCCAACGCAT-----GTAG-TG-................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACGCGAGGCGCAG-CAGGGAC.....................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................T-TATTCCCAATCGCAAAA-----------------------------------------------GAG---........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...............................ACGT-----------TGGATCTTAAC----TA----TCGG...............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................ACTGAGA-AAAATGGCATAATT.....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................CGCAG-CAGGGACGT-----------TGGATCT.................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................AG-CAGGGACGT-----------TGGATCTTAAC----.........................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
....................................................................................................................................................................................................................................G-TAAAA--AGTCGGGCAT-TATTCC........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TTAAATAACCAG-------------------ATCCAACGC...............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................G---AGAGAATCG------------G-----------TATCACTCGC.............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................G-CAGGGACGT-----------TGGATCTTAAC----.........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................TTGCCGAT----------A----------TACTGAGA-AAC................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............CGAGGCGCAG-CAGGGACG....................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................AT-----GTAG-TG-TAAAA--AGTCGGGC.................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................................................................ACCAATTGCCGAT----------A----------TACTGAG.....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
droEre2
CGCAAATTGTACACGCGAGGCGCAG-CAGTGACGT-----------TGGATTGGAAC----TA----TCGGTTTGTGT--------GACTTATT------TTGTGGCATATTTA-ATGCGGCCAATTGCCGAT----------A----------AACCGAAG-AAAATAGCATAATTAAATAACCAG-------------------AGCCAGCGCAT-----CTAG-TG-TAAAA--AGTCGGGCAT-GATTCCCAATCGCAAG------------------------------------------------------AGAGAATCG------------G-----------TATCACTCGTTGAC--CCGTCTCGTTCGAGTC--TCGATCGC----------GTCATCTCACTCGCACCCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................TGGAAC----TA----TCGGTTTGTGT--------G...............................................................................................................................................................................................................................................................................................................................................2011.0010000010
................GAGGCGCAG-CAGTGACGT-----------TGG.....................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.GCAAATTGTACACGCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
...............CGAGGCGCAG-CAGTGACGT-----------TG......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
..........................................................................................................................................................................................................................................A--AGTCGGGCAT-GATTCCCAATCGC.................................................................................................................................................................2411.0011000000
droYak3
CGCAAATTGTGCACGCGAGGCGCAGCCAGTGACGT-----------TGGATCGGAAC----TA----TCGGTTTGTGT--------GGCTTATT------TTGCGGCAAATTTA-ATGCGGCCAATTGCCGAT----------A----------TACCGAGG-AAAATAGCATAATTAAATAACCAG-------------------AGCCAGCGCAT-----CTAG-TG-TAAAA--AGTCGGGCAT-GATTCCCAATCGCAAAA-----------------------------------------------GAG---AGAGAATCG------------G-----------TATCACTCGCTGAC--CCGACTCGTTCGAGTC--TCGATCGC----------GGCATCTCACTCGCACCTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...AAATTGTGCACGCGAGGCGC...............................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.........................CCAGTGACGT-----------TGGATCGGAAC----C........................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
..............GCGAGGCGCAGCCAGTGACGT-----------TGGAA...................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000
droEug1
CGCAAATTGTACACGCGAGGCGCAG-CAGTGACGT-----------TGGATCGGATC----TA----TCGGTTAGTGT--------GGCGTGTT------TTGCGGCAAATTTA-ATGCCGCCGATTGCCAAT----------G----------TCCCGAGG-AAAATAGCATAATTAAATAACCAG-------------------AGCCAGCGCAT-----CTAG-TG-TAAAA--AGTCGGGCAT-TATTCCCAATCGCAAAA-----------------------------------------------GAG---AGAGAATCGAAT-CG------AACTCATCTCTCGTTGACTCGTTGAC--CCGTCTCGTTCGAGTC--TCGCTTGT----------GCTATCACTTTCGCACTTASizeHit CountTotal NormTotal
No Reads
droBia1
CGCAAATTGTACACGCGAGGCGCAG-CAGTGGCGT-----------TGGATCAGAAC----TA----TCGGTTGGTGT--------GGCGTGCC------TGGCGGCGGACTTA-GAGCCGCCGATGGGCCGT----------G----------TGCCGAGG-AAAATAGCATAGTTAAACAACCAG-------------------AGCCAGCGCAT-----CTAG-TG-TA-AA--AGTCGGGCAT-TATTCCCAATCGCAGAG-----------------------------------------------GAG---AGTCA----------------------TCTCTCGCCGACTCGCTGGC--CCGACTCGCTGGA-TC--TCGTTCGC----------GCCGTCTCGCTCACACTCGSizeHit CountTotal NormTotal
No Reads
droTak1
CGCAAATTGTACACGCGAGGCGCAG-CAGTGACGTT----------TGGATCGGAAC----TA----TCGGTTTGTGT--------GGCGTGCT------GGGCGGCAAATTTA-ATGCCGCCGATTTGCAAT----------G----------TCCCGAGG-AAAATAGCATAATTAAATAACCAG-------------------AGCCAGCGCATCTCATCTAG-TG-TTAAA--AGTCGGGCAT-TATTCCCAATCGCAAAA-----------------------------------------------GAGAAAAGAGAATCGAGTCCGAATCCAAA----TCTCTCGCTGACTCGCTGAC--CCGTCTCGTTGGAGTC--TCGCTCGT----------GTCATCTCCGTCGCACCCASizeHit CountTotal NormTotal
No Reads
droEle1
CGCAAATTGTACACGCGAGGCGCAG-AAGTGACAT-----------CG--TCGGATC----AA----TCGGTTTGTAT--------GGCGTGTT------TTGAGGCAAACTAA-ATGCAGTCGATTGCCAAT----------G----------TCCCGGAA-AAAATAGCATAATTAAATAAT----------------------AACCAGCACAT-----CTAG-TG-TAAAA--AGTCGAGCATTTATTCCCAATCGCAAAA-----------------------------------------------GAG--------------------------------------GCACTCGCTGAC--CCGTCTCGTTCGAGTC--CCAGTCGT----------GCCATCCTACTTGCACCCASizeHit CountTotal NormTotal
No Reads
droRho1
CGCAAATTGTACACGCGAGGCGCAG-CAAAGACAT-----------CG--TCGGATC----AA----TCGGTTTGTAA--------GGCGTGTT------TTGAGGAAAATTAA-ATGCCGTCGATTGCCAAT----------G----------TTCCGAGA-AAAATAGAATAATTAAATAAT----------------------AACCAGCGCAT-----CTAG-TG-TAAAA--AGTCGGGCATTTATTCCCAATCGCAAAA-----------------------------------------------GAG--------------------------------------GCACTCGCTGAC--CCGTCTCGCTCCAGTC--TCGTTCGT----------GCCATCCCGCTTGCACTCASizeHit CountTotal NormTotal
No Reads
droFic1
CGCAAATTGTACACGCGAAGCGCAG-CAGTAACGT-----------CG--TCGGATC----TA----TCGGTTGGTGT------TTTACGTGCT------TTACGGCAAAATAA-ATGCCGCCGATTGCCAAT----------G----------CCCCGGGA-AAAATATCATAATTAAATAACCAG-------------------AGCCAGCGCAT-----CTAG-TGTTAAAA--AGTCGGGCATTTATTCCCAATCGCAAAA-----------------------------------------------GAG---AG--AACCA------------AA----TCTC--TGGCACTCGCTGAC--CCGTCTCGCTTGAGTC--TGGCGCGT----------GCTATCTCGCTTGCACTCASizeHit CountTotal NormTotal
No Reads
droKik1
CGCAAATTTAACACGCGAGACACAGCCAGTGA--------------TGGATCAGCCCTTGCTA----TAAAGGTGTGT-----T-TTTAAAGGCTCCGTGGAGCGGCAAATAAA-ATGCCGCAGATTGG-AAT----------T----------GGCGGAGA-AAAA-----GAATTAAATAAT-------------------------------------------AA-TAAAA--AGTCGGGCAT-AATTCTGAATCTCG-------------------------------------------------------------------------------------------CAACTCGCTGAC--GCGTCTCGCTGGAGTG--TCGCTCACTGACTCAGCCTGCATCCCGCTCGCACG--SizeHit CountTotal NormTotal
No Reads
droAna3
CGCAAATT-TACTCGCGAGGCGCAACCAGTGACGTCGTC----------GTCGGGGC----TTTTTTTCAGTGCGTGAGTG-CT-TTTTTAGCC------GACCGGCAAATTTTTATTCCT----------AA----------AA---------ATTGGGAT-AAAGAAAAATAATAAAATAACTAGTAGGC---------------GCCACCG-----------G-AC-ATAAA--AGTCGGGCAT-TATTCTGA------------TA-TTTCGATGGAAAATGATTTTTTTTTTTT---------CTGAG--AGAAGAGAACCA------------GACCTCGCAC--TCGCACTCGCTGTC--GCGTCTCGCTGGAT-G----GGTC-T----------GCCGGCCCGCCTGCACGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................................................GACCTCGCAC--TCGCACTCGCT............................................................2111.001010000
.........................................................................................................................................................................................AGTAGGC---------------GCCACCG-----------G-AC-ATAA............................................................................................................................................................................................2111.001001000
droBip1
CGCAAATT-TACTCGCGAGGCGCAACCAGTGACGTCGTC----------GTCGGGGC----TTTTTTTCAGTGCGTGAGTG-CT-TTTTTAGCC------GACCGGCAAATTTTTATTCCTTAAATT----------------G----------GGCT-AGAAAAA-----ATAATAAAATAACTAGTAGGC---------------GCCACCGGA-----------CA-T-AAA--AATCGGGCAT-TATTCTGC------------TA-TTTCGATTGAAAATGATTTTTTTTTTTTTT--GGA--CTGAG--AGAAGAGAACCA------------GACC--------TAGCACTCGCTGACTCGCGTCTCGCTGGAT-GGGTCGTC--T----------GCCGGCCCGCCTGCACGCASizeHit CountTotal NormTotal
No Reads
dp5
CGCAAAAATTACACGCGAGCCCCGAAACGTGACGTAGTCGTGACGTTAG------------------------------TAGA-CTTGCAAGGC------AGCCGGCGAAACGT-ATGTAGAAGATCAC-ACTTGGTCGCATTTAATGGCGCACTACC------AAAGAATAGAATTTAATAATTGG-------------------A-CAAATGCAT-----TTAAACG-TAAAATATGCTGGGCAT-TATGCCCAATCGTTACTGGACATTTTGGACAGAAAATGATATTTTTCTCAGCAGCGCACTCT----C---AGAGAATCC------------------------ACTCACTCGCTGAC--CGGACTCGTTCGAGTG--CG--TCACG---CCA---GCTGGCCCGCTTACACGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................ATTTAATGGCGCACTACC------AAAA..............................................................................................................................................................................................................................................................2211.0010010000000
......................................................................................................................................................................................................................................................................................................................................C------------------------ACTCACTCGCTGAC--CGGACTCGTTCGA..........................................2811.0010100000000
........................................................................................................................................................................................................................T-----TTAAACG-TAAAATATGCTGG...................................................................................................................................................................................2111.0010000000010
droPer2
CGCAAAAATTACACGCGAGCCCGAA-ACGTGACGTAGTCGTGACGTTAG------------------------------TAGA-CTTGCAAGGC------AGCCGGCGAATCGT-ATGTAGAAGATCAC-ACTTGGTCGCAATTAATGGGGCACTACC------AAA-----GAATTAACGAATAATTATATTCCATCGGTAATTGGACAAATGCAT-----TTAAACG-TAAAATATGCTGGGCAT-TATGCCCAATCGTTACTGGACATTTTGGACAGAAAATGATATTTTTCTCAGCAGCGCACTCT----C---AGAGAATCC------------------------ACTCACTCGCTGAC--CGGACTCGTTCGAGTG--CG--TCACG---CCA---GCTGGCCCGCTTACACGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................ACTCGTTCGAGTG--CG--TCACG---CCA---G..................2411.001010000
...................................................................................................................................CTTGGTCGCAATTAATGGGGC..............................................................................................................................................................................................................................................................................2111.001100000
..........................................................................................................................................................................................................ATTGGACAAATGCAT-----TTAAAC..................................................................................................................................................................................................2111.001010000

Generated: 05/19/2015 at 01:00 AM