ID:

dsi_10911

 Coordinate:

3r:7773961-7774110 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

AAAGGATTTTTTCCACATATTTTGCTTTTTATAACCCTTAACGAATTTTTTAAGAATATTGGATGGCATATTGGAAGCATAACTTCCTATTTAATATTATATATTTATAATAATTAGATTAGATTATAATATGTAATTATGAATAAGTTGCTATATTAAAATACGGATCCAGAAAATTAAACATAACTCAAAATTTGCAGACGAACAAGGTGATGGAAAAGCCTTTGGTATCAACCGGTCAATCCATCAT
**************************************************........((((((....(((((((((.....))))).(((((((((((((....)))))).))))))).......((((((((((((.......)))))).)))))).))))...))))))............................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 O001
Testis
 M024
male body		 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
.AAGGATTTTTTCCACATATT..................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0
..........................................................................................................................................................................................................GAACAAGGTGATGGAAAAGCC........................... 21 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................GGTGATGGAAAAGCCTTTGGTATCAAC............... 27 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................TATGGAATATTATATTTTTATAATAA......................................................................................................................................... 26 3 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................TGTAAACGCCCTTGGTATCAA................ 21 3 2 0.50 1 0 0 0 1 0 0 0
...........................TTTAAATCCCTTAACGA.............................................................................................................................................................................................................. 17 2 20 0.10 2 0 2 0 0 0 0 0
..................................................................................................................................................GTCGCTATATTAAAA......................................................................................... 15 1 16 0.06 1 0 0 0 0 1 0 0
......................................TAACGAATTTTTAAAGAAGAT............................................................................................................................................................................................... 21 2 17 0.06 1 1 0 0 0 0 0 0
.............................................................................................................................................................................AAACTAAATATAACTCAAA.......................................................... 19 2 20 0.05 1 0 0 0 0 0 0 1
.........................................................................................................................................................................................................................AAAGCCATTGATATCAACTG............. 20 3 20 0.05 1 0 0 0 1 0 0 0
...................................................................................................................................TGTAATTATGAATTA........................................................................................................ 15 1 20 0.05 1 0 0 0 0 0 1 0
.............................................................................................................ATAACTAGATTAGATT............................................................................................................................. 16 1 20 0.05 1 1 0 0 0 0 0 0

Anti-sense strand reads

TTTCCTAAAAAAGGTGTATAAAACGAAAAATATTGGGAATTGCTTAAAAAATTCTTATAACCTACCGTATAACCTTCGTATTGAAGGATAAATTATAATATATAAATATTATTAATCTAATCTAATATTATACATTAATACTTATTCAACGATATAATTTTATGCCTAGGTCTTTTAATTTGTATTGAGTTTTAAACGTCTGCTTGTTCCACTACCTTTTCGGAAACCATAGTTGGCCAGTTAGGTAGTA
**************************************************........((((((....(((((((((.....))))).(((((((((((((....)))))).))))))).......((((((((((((.......)))))).)))))).))))...))))))............................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
..................................................................................................................................................................................................................................CCATAGTTGGCCAGTTAGGTA... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CGGAAACCATAGTTGGCCAGTTAGGTA... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0
................................................AAATTGTTAGAACCTACCGGATAAC................................................................................................................................................................................. 25 3 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CCATAGTTGGCCGGTTAGGTA... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TTTCGGGAACCATAGTTGT.............. 19 2 4 0.25 1 0 0 0 0 1 0 0 0 0
............................................................................................................................................................ATTGTATGCCTAGGACTCTT.......................................................................... 20 3 4 0.25 1 0 0 0 1 0 0 0 0 0
....................................................................................................................................................ACGAAGTAATTTTATGCC.................................................................................... 18 2 12 0.08 1 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................................AGAGTTGGACAGTTAGGAA... 19 3 18 0.06 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................AGAGTTAGCCAGTTAGGAA... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0
...................AAAAAAAAAAATATTGGGAA................................................................................................................................................................................................................... 20 2 20 0.05 1 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................TTTAATGCCTAGGACTCTT.......................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0
......................................................................................................................................................................................................GCTGCTTGATCCACTA.................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1
........................................................................................................................................................................GGTCTATTACTTTGTAT................................................................. 17 2 20 0.05 1 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:7773911-7774160 - dsi_10911 AAAGGATTT------TTT---CCAC---ATATTTTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT-------TATAACCCTTAACGAATTTTTTAA-------------------GAA---------------------------------------------------------------------------------------------------------------------------TATTGGATGGCATATTG----------G-----------AAGCATAACTTCCTATTTAATATTATATATTT----------------ATAATAATTAGATTAGATTATAAT---ATGTAATTATG----------------------A----------ATAAG--------T-TGCTATAT----------------TAAA-----------------------------------------------------------ATACGGATCCAG-AA--AATTAAAC-----ATAA---CTCAAAA--TTTGCAGACGAACAAGGTGATGGAAAAGCCTTTGGTATCAACCGGTCAATCCATCAT
droSec2 scaffold_12:668428-668688 - AAAGGATTT------TTT---CCAC---ATATTTTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT-------TATAACCCTTAACGATTTTTTTAA-------------------GAA---------------------------------------------------------------------------------------------------------------------------TATTGGATGGCATATTTAAAATAAAAAC-----------AAGCGTAACTTCCTATTTAATATTATACATTTT---------------ATAATAATTATATTAGATTATAAA---ATGTAATTATG----------------------A----------ATAAG--------T-TGCTATAT----------------TAAA-----------------------------------------------------------ATACGGATCCAG-AA--AATTAAAC-----ATAA---CTCACAA--TTTGCAGACGAACAAGGTGATGGAAAAGCCTTTGGTATCAACCGGTCAATCCATCAT
dm3 chr3R:13493981-13494254 + AAAGGATTT------TTT---CCAT---ATATTTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------------------------------------------------------------------------------------------TTT-------TATAACCCTTAACAAATTTTATAT-------------------GAA---------------------------------------------------------------------------------------------------------------------------TATT-GATGCCATACT-AAAAAAAAAAC-----------AAGCATAAGTTCCTATTTAATATAATACAATTT---------------ATAATAATTAGACTAGATCATAAT---ATGTAATTATGTATGTAATA-TGT---------------AA---ATATG--------TATGTAATAT----------------TAAA-----------------------------------------------------------AAACGGATCCAG-AA--AATTAACC-----AAAA---CTCACAA--TTTGCAGACGAACAAGGTGGTGGAAAAGCCTTTGGTATCAACCGGCCAATCCATCAT
droEre2 scaffold_4770:8137312-8137604 - AATTGGTTT------TTT---TAGT-------------------------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-------CTTAAGCCTAATCAAATATTTTAA-----------------------------------------------------------------------------------------------------------------------GAGGATATTGAGGAT-----------TATT-GAGGACATTCT-TTAAA-AGAACAATATTTTAAATAGCATGACTTCCCTTTTCATTTTACTTGT---ATGAAGTATTCCAATATGATAATTAGAATAGAT-ATAACATTATGTTATTATG----------------------A----------ATTAGTA-AATAAT-TTCAATAT----------------TGAA-----------------------------------------------------------ATACGGATCCAG-AA--AAGTAAAC-----AAAA---CTCAACA--TTTTCAGACAAACAAGGTGATGGAACAGCCTTTGGTATCAACCGGTCAATCCATCAT
droYak3 3R:2065674-2065912 + AAAGGATTT------TTT---T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAACCGTAATAAAATATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATAGCTTAACTTCCCTTTTAATATTATACATTTTTTTATCTATTCCAAATTGATAATTAGATTAGATTATAATATTATGTAATTATG----------------------C----------CATAGCT-AATAAC-TACAATAT----------------TGAA-----------------------------------------------------------ATACGGATCCAG-AA--AATTAAAC-----TAAA---TTCACTA--TTTTCAGACAAACAAGGTGATGGAACAGCCCTTGGTATCAACCGGCCAATCCATTAT
droEug1 scf7180000409562:14146-14382 + AGAAGGATT------TTT---TAGT-------------------------------------TTTTCTTTT-----GCACAAA-----CACT-TAAAAAATGATTCCAAG----------------------------------------------------------------------------------------------------------------------------------------------TCATTACATTT--------------------------TCTTAAAGAGATTTTTAGAAACAT------------CATCAATA-------AGAAATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACC------------------------------------------------------------------------------------------A-TAAGTGATTATAACT-AGCAAA--CTTATATT--------CTAAC-------------------------------------------------------TT--AATCAAAACCATC------------------AC-AA--TTATAAAC-----TAAA---CTTTTGA--TTTCCAGACCAATAAGGTGATGGATATGCCTTTGGTTTCAACCGGCCAGTCCATTAT
droBia1 scf7180000302402:8159486-8159762 + AAAGGTGTT------TTT---TGGT-------------------------------------TTTTCCT-------------------------GAAACACCTACTTAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT-------TTTAAGGTTAAACATTATTTTTAACTTGAGTAACTATATAAAA---TCGAAAAACAATTTGAGCCTCAAAGTCTATCAGACATAATATCAATTTCCTGTGCATTGTATTCAATAATTTTAATTA------------------------------------------------------------------------------------------------------------------------------------ATACTAT------------------------------------------------------------------------TAAAAT-T-------------------------------------------------------------TTTGAAATAAAACCATCATAATAATATATGG------------------------AACA---CTTACTA--TTTTCAGACCAACAAGGTAATGGCTAATCCCTTGGTTCAAACAGGCCAATCCATTAT
droTak1 scf7180000415811:108786-109164 - AAAGGATTT------TTT---TCTT---TTATATTTT---TTAGAAGTACACTTTTTTTTAT----------------AT--A-----T----T----TAAAGT----------------------ATCTTTACATTTGAAATACATTAACTTAAAACACCACAGCCAATATAAATTTGAGTAAGAGGGAGTTATAGAATGGTATTCTATCATTCGATGTGCAATTATACTTTTCATTTCCA------A----------------------TACAAATTAGTTGTCTTAAAAAGATTTCGAGTTAAGGAAATTTGATGTTCTGCACTCCCATAAATTTATTA--------------------------------------------------------------------------------------------------------------------------------------------------------CAATTGGAAATATTA-------------------------------------------------------------------------------------------------------------------------------------------------------GAGAAA--TTTATATTTAAAC---------------------------------------------------------------TTTCACATCGAAATATAATAT---------------------TAATAAAC--AC-AACA---TTTACTA--TTTCCAGACGAACAAGGTAATGGATAAGCCTTTGGTTTCAACAGGCCAATCCATTAT
droEle1 scf7180000491080:2787384-2787714 - AAAGGATAT------TTA---TTTTAAT-TT--GTATTTCGTAAAA-----TTTTTTTTTAC----------------GTAAA-----CGGAGCCAAACAAATT----------------------GTCTTAAAATTGGAATTACAT-------------------------------------------------------------------------------GTCCCATTCAGTTCCAGCTTTTA----------------------AAACAATATGTTGTCTTTTCAAAAAACAGATTTAAGAAACAT------------CTCCAACAAATTTATTTAAAAAA--------------------------------------AATATTAA---------------AAACTA-----------------CTACAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----TTTTATATATGTGCGTAGTGCAGT---------------TA-------GTA-CGTATC-TACTTTTT----------------TTAA-------------------------------------------------------------ATAAA------TA--AATTTAACAAAGTTACT---CTCCGTA--TTTTCAGACCAACAAGGTGATTGATAAGCCTTTAGTTTCAACCGGCCAATCCATTAT
droRho1 scf7180000778233:111430-111700 + ATTTGAATA------A----CGTATAGT---GTTTAT---------------------TTTTT----------------TAAA-----T----TTAAACATATTGTTTATATTTTTTAAATTT---A-------------AATG------------------------------------------------------------------------------------CGTATTTAATTTAAGCCCAAGCAACATTTGT-TTGCAACAATT-----------------------------------------------------------------GGGATCAAAAAT--------------------------------------AACATAAATAATTTGAGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATGCGGGTGAT----------------GAAACAGAAAGAAG--------C-TGTTATATATAAAAGATACATTTTTAAT-TT-----------AAAACAATA---------------------------------------------TAA-AG---A-TATCT-----TTTAA--TTTGTTACGTAAAATGACCAAAAACATAGTAGGTAAGCTTTTCGTA--------------------
droFic1 scf7180000453912:1983388-1983646 - AAAAGGATT------C----GATTTTTT---GTTT-----------------------------------------GCTTAGTTTTTA----------------------------------ATAAC-------------T---------------------------------------------------------------------------------------------------AAGCTCTAACTGCAATTACTTTGCTTCAATC---------------------T--GAAGAATTTCTAAATTTT------------TTGTTTTA-------TAAAATTTTTGATAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTTAAGACGAAGCTAA--TTTGCT-ATAAAT-TTCCATCT----------------TAAAAATAATATTCATCTTACAAACTT---------------------------------------------CAG-AA---A-TAAAT-----AATAC--TTTTTTA--CTTACAGACAAACAAGGTGATGGATAAGCCATTGGCTTCAACCTGCCAATCCATTAT
droKik1 scf7180000302461:1021899-1022139 - AAAGGATGTTTAAATTTT---TTACAAT---TTTTGTTTCA--------------------------------------TAAA-----T----TTGGTGATGATTTTTGCTTGTTTTAAATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT-CGAGTAATATTATATATATT------------------------------------------------------------------------------------------A-TAT------------------------G--------T-TTCCATAT---------TTATTATTAAA-TT-----------AAGATTCCAAATATTTTTCTTT--CAATAAACTCACAATAATTATAAT----CCTTGCAA---------------ATTT---TTTACAA--ATTTCAGACCAACAAGCAGGCTGAAATGTCGCTGGTGTCCACTGGCCAGTCCATCAT
droAna3 scaffold_13340:5785272-5785436 + AAATGATTT------TTT---AAAT---ATATATATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTAAATATATGATTTTGTTTTAAGGTGTTATTTAAGATTTGATAATCTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAG-AAATTTTTAAAAATAATTTC----TATACTT--ATTGCAGACCAATAAAATGATAGACAATCCTTTGCTCTCCACCGGCCAATCGATAAT
droBip1 scf7180000396708:3028820-3028984 - AAAGGACTT------TTT---TTTT---ATA---------AATAAA---------------------------TTTAATTTTT----------------------------------TAATAA---A-------------AATG------------------------------------------------------------------------------------TATTTTTATTT-------------------------------------------------------------------------------------------CGT-------GCTACACCTTTGCTAATATTGATT-------------------AAA---------------------------------------------------------------------------------------------------------------------------TATT-ACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGTTACGTACCA--CTTTCAGACCAATAAAATTATAGACAATCCTTTGCTGTCCACCGGCCAATCGATAAT
dp5 2:23694615-23694670 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGACCAACAAAATGATAGAATCCCCTTTGCTCTCCACGGGCCAGTCCATTAT
droPer2 scaffold_3:6530680-6530760 + AAAATTAAT------GTT---GTACATT-TA--TTTTTTAACAAAA---------------------------TTTCTTTTTTCTATA----------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCTTCATTTTTAATACTATACATAC----------------ATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004513:1437310-1437495 + ACTCGATAG------TGTTTGGAATTGT---GTTTCC----TTTTT-----TTGTTTT-------------------TTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAATTTAATGAAATTAA--------------------------------------AGTATTAG---------------AATCTA-----------------GTCTAGCTTTTTATATTCAATATATTTAATTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTA-TATAAT-TTTTATTT----------------TATAATTAATATTAAGTTTGTGGAATT------------T--AACAGAATCTGCG---------------AC-AA-AAATAATTAAAT-----ATAA---------------------------------------------------------------------
droVir3 scaffold_13047:17101588-17101645 - A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCAGGCCAACAAAGTGATGGACATGCCTCTGCTGTCCACTGGGCAGTCGATTAT
droMoj3 scaffold_6540:14537061-14537203 + AGGATATTT------G-----TAAT-------------------------------------TTTTTATATATTATCTTTTTTTTTTA----------------------------------ATTAC-------------T---------------------------------------------------------------------------------------------------AAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTCT-----------------------------------------GAGTGATTTCCCATTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTT----TTTCTCA--ATTGCAGGCTAATAAAGTGATGGATCTGCCGCTGCTAGCAACTGGCCAGTCCGTCAT
droGri2 scaffold_14906:12162653-12162710 - A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCAGGCGAACAAAGTGATGGACATGCCTCTGTTATCCACTGGACAGTCCATCAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAAGGATTT------TTT---CCAC---ATATTTTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT-------TATAACCCTTAACGAATTTTTTAA-------------------GAA---------------------------------------------------------------------------------------------------------------------------TATTGGATGGCATATTG----------G-----------AAGCATAACTTCCTATTTAATATTATATATTT----------------ATAATAATTAGATTAGATTATAAT---ATGTAATTATG----------------------A----------ATAAG--------T-TGCTATAT----------------TAAA-----------------------------------------------------------ATACGGATCCAG-AA--AATTAAAC-----ATAA---CTCAAAA--TTTGCAGACGAACAAGGTGATGGAAAAGCCTTTGGTATCAACCGGTCAATCCATCATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.AAGGATTT------TTT---CCAC---ATATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAAGGTGATGGAAAAGCC...........................2111.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATGGAAAAGCCTTTGGTATCAAC...............2711.00100000000001000000
droSec2
AAAGGATTT------TTT---CCAC---ATATTTTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT-------TATAACCCTTAACGATTTTTTTAA-------------------GAA---------------------------------------------------------------------------------------------------------------------------TATTGGATGGCATATTTAAAATAAAAAC-----------AAGCGTAACTTCCTATTTAATATTATACATTTT---------------ATAATAATTATATTAGATTATAAA---ATGTAATTATG----------------------A----------ATAAG--------T-TGCTATAT----------------TAAA-----------------------------------------------------------ATACGGATCCAG-AA--AATTAAAC-----ATAA---CTCACAA--TTTGCAGACGAACAAGGTGATGGAAAAGCCTTTGGTATCAACCGGTCAATCCATCATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAA--TTTGCAGACGAACAAGG........................................2111.0010001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGGTGATGGAAAAGCCT..........................2111.0010001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAAGGTGATGGAAAAAA............................2020.5010001
dm3
AAAGGATTT------TTT---CCAT---ATATTTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------------------------------------------------------------------------------------------TTT-------TATAACCCTTAACAAATTTTATAT-------------------GAA---------------------------------------------------------------------------------------------------------------------------TATT-GATGCCATACT-AAAAAAAAAAC-----------AAGCATAAGTTCCTATTTAATATAATACAATTT---------------ATAATAATTAGACTAGATCATAAT---ATGTAATTATGTATGTAATA-TGT---------------AA---ATATG--------TATGTAATAT----------------TAAA-----------------------------------------------------------AAACGGATCCAG-AA--AATTAACC-----AAAA---CTCACAA--TTTGCAGACGAACAAGGTGGTGGAAAAGCCTTTGGTATCAACCGGCCAATCCATCATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.AAGGATTT------TTT---CCAT---ATATTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................221982.00982000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100003000000000000000000001000000000000000000000000000000000000000000001891892751548455000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAGGATTT------TTT---CCAT---ATATTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................211302.0030200000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000100000000000000001000000000100000000000000000000000000000000000000216967013151000100000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.AAGGATTT------TTT---CCAT---ATATTTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------------------------------------------------------------------------------------------TTT-------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29141.004100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000602300102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAGGATTT------TTT---CCAT---ATATTTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23133.0033000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051400010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGGATTT------TTT---CCAT---ATATTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21129.002900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118700012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAGGATTT------TTT---CCAT---ATATTTTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23120.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000580007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAGGATTT------TTT---CCAT---ATATTTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------------------------------------------------------------------------------------------TT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28117.001700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001120004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAGGATTT------TTT---CCAT---ATATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000630006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGGATTT------TTT---CCAT---ATATTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2019.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAGGATTT------TTT---CCAT---ATATTTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2418.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000230003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAGGATTT------TTT---CCAT---ATATTTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------------------------------------------------------------------------------------------T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGTGGTGGAAAAGCCTTTGGTATC..................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTATCAACCGGCCAATCCATC..2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAGGATTT------TTT---CCAT---ATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAGGATTT------TTT---CCAT---ATAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAA--TTTGCAGACGAACAAGGTGGTGG..................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAGGATTT------TTT---CCAT---ATATTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT----------------TAAA-----------------------------------------------------------AAACGGATCCAG-A.........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAACAAGGTGGTGGAAAAGCCTTT........................2611.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAACAAGGTGGTGGAAAAGCCTT.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATCAACCGGCCAATC......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................TT---CCAT---ATATTTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------------------------------------------------------------------------------------------TTT-------TATAACCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAAAAGCCTTTGGTATCAACCGGCC..........2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGAAAAGCCTTTGGT.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
AAAGGATTT------TTT---CCAT---ATATTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCTTTGGTATCAACCGG............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAGGATTT------TTT---CCAT---ATATTTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------------------------------------------------------------------------------------------TTT-------T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAGGATTT------TTT---CCAT---ATATTTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AAAGGATTT------TTT---CCAT---ATATTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGACGAACAAGGTGGTGGAAAAGC............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGTGGTGGAAAAGCCTTTGG......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGTGGTGGAAAAGCCTTT........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAGGATTT------TTT---CCAT---ATATTTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAAAAGCCTTTGGT.....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGGTGGTGGAAAAGCCTTTGGTA....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAGGATTT------TTT---CCAT---ATATTTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGAAAAGCCTTTGGTAT...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGGATTT------TTT---CCAT---ATATTTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-------------------------------------------------------------------------------------------TTT-------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAAAGCCTTTGGTATC..................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGGTGGTGGAAAAGC............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGACGAACAAGGTGGTGG..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AATTGGTTT------TTT---TAGT-------------------------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-------CTTAAGCCTAATCAAATATTTTAA-----------------------------------------------------------------------------------------------------------------------GAGGATATTGAGGAT-----------TATT-GAGGACATTCT-TTAAA-AGAACAATATTTTAAATAGCATGACTTCCCTTTTCATTTTACTTGT---ATGAAGTATTCCAATATGATAATTAGAATAGAT-ATAACATTATGTTATTATG----------------------A----------ATTAGTA-AATAAT-TTCAATAT----------------TGAA-----------------------------------------------------------ATACGGATCCAG-AA--AAGTAAAC-----AAAA---CTCAACA--TTTTCAGACAAACAAGGTGATGGAACAGCCTTTGGTATCAACCGGTCAATCCATCATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAACAAGGTGATGGAAC...............................2011.0010001000
droYak3
AAAGGATTT------TTT---T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAACCGTAATAAAATATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATAGCTTAACTTCCCTTTTAATATTATACATTTTTTTATCTATTCCAAATTGATAATTAGATTAGATTATAATATTATGTAATTATG----------------------C----------CATAGCT-AATAAC-TACAATAT----------------TGAA-----------------------------------------------------------ATACGGATCCAG-AA--AATTAAAC-----TAAA---TTCACTA--TTTTCAGACAAACAAGGTGATGGAACAGCCCTTGGTATCAACCGGCCAATCCATTATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGATGGAACAGCCCTTGGTATCA.................2620.50100010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAACCGGCCAATCCATT..2120.50101000000000
droEug1
AGAAGGATT------TTT---TAGT-------------------------------------TTTTCTTTT-----GCACAAA-----CACT-TAAAAAATGATTCCAAG----------------------------------------------------------------------------------------------------------------------------------------------TCATTACATTT--------------------------TCTTAAAGAGATTTTTAGAAACAT------------CATCAATA-------AGAAATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACC------------------------------------------------------------------------------------------A-TAAGTGATTATAACT-AGCAAA--CTTATATT--------CTAAC-------------------------------------------------------TT--AATCAAAACCATC------------------AC-AA--TTATAAAC-----TAAA---CTTTTGA--TTTCCAGACCAATAAGGTGATGGATATGCCTTTGGTTTCAACCGGCCAGTCCATTATSizeHit CountTotal NormTotal
No Reads
droBia1
AAAGGTGTT------TTT---TGGT-------------------------------------TTTTCCT-------------------------GAAACACCTACTTAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT-------TTTAAGGTTAAACATTATTTTTAACTTGAGTAACTATATAAAA---TCGAAAAACAATTTGAGCCTCAAAGTCTATCAGACATAATATCAATTTCCTGTGCATTGTATTCAATAATTTTAATTA------------------------------------------------------------------------------------------------------------------------------------ATACTAT------------------------------------------------------------------------TAAAAT-T-------------------------------------------------------------TTTGAAATAAAACCATCATAATAATATATGG------------------------AACA---CTTACTA--TTTTCAGACCAACAAGGTAATGGCTAATCCCTTGGTTCAAACAGGCCAATCCATTATSizeHit CountTotal NormTotal
No Reads
droTak1
AAAGGATTT------TTT---TCTT---TTATATTTT---TTAGAAGTACACTTTTTTTTAT----------------AT--A-----T----T----TAAAGT----------------------ATCTTTACATTTGAAATACATTAACTTAAAACACCACAGCCAATATAAATTTGAGTAAGAGGGAGTTATAGAATGGTATTCTATCATTCGATGTGCAATTATACTTTTCATTTCCA------A----------------------TACAAATTAGTTGTCTTAAAAAGATTTCGAGTTAAGGAAATTTGATGTTCTGCACTCCCATAAATTTATTA--------------------------------------------------------------------------------------------------------------------------------------------------------CAATTGGAAATATTA-------------------------------------------------------------------------------------------------------------------------------------------------------GAGAAA--TTTATATTTAAAC---------------------------------------------------------------TTTCACATCGAAATATAATAT---------------------TAATAAAC--AC-AACA---TTTACTA--TTTCCAGACGAACAAGGTAATGGATAAGCCTTTGGTTTCAACAGGCCAATCCATTATSizeHit CountTotal NormTotal
No Reads
droEle1
AAAGGATAT------TTA---TTTTAAT-TT--GTATTTCGTAAAA-----TTTTTTTTTAC----------------GTAAA-----CGGAGCCAAACAAATT----------------------GTCTTAAAATTGGAATTACAT-------------------------------------------------------------------------------GTCCCATTCAGTTCCAGCTTTTA----------------------AAACAATATGTTGTCTTTTCAAAAAACAGATTTAAGAAACAT------------CTCCAACAAATTTATTTAAAAAA--------------------------------------AATATTAA---------------AAACTA-----------------CTACAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----TTTTATATATGTGCGTAGTGCAGT---------------TA-------GTA-CGTATC-TACTTTTT----------------TTAA-------------------------------------------------------------ATAAA------TA--AATTTAACAAAGTTACT---CTCCGTA--TTTTCAGACCAACAAGGTGATTGATAAGCCTTTAGTTTCAACCGGCCAATCCATTATSizeHit CountTotal NormTotal
No Reads
droRho1
ATTTGAATA------A----CGTATAGT---GTTTAT---------------------TTTTT----------------TAAA-----T----TTAAACATATTGTTTATATTTTTTAAATTT---A-------------AATG------------------------------------------------------------------------------------CGTATTTAATTTAAGCCCAAGCAACATTTGT-TTGCAACAATT-----------------------------------------------------------------GGGATCAAAAAT--------------------------------------AACATAAATAATTTGAGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATGCGGGTGAT----------------GAAACAGAAAGAAG--------C-TGTTATATATAAAAGATACATTTTTAAT-TT-----------AAAACAATA---------------------------------------------TAA-AG---A-TATCT-----TTTAA--TTTGTTACGTAAAATGACCAAAAACATAGTAGGTAAGCTTTTCGTA--------------------SizeHit CountTotal NormTotal
No Reads
droFic1
AAAAGGATT------C----GATTTTTT---GTTT-----------------------------------------GCTTAGTTTTTA----------------------------------ATAAC-------------T---------------------------------------------------------------------------------------------------AAGCTCTAACTGCAATTACTTTGCTTCAATC---------------------T--GAAGAATTTCTAAATTTT------------TTGTTTTA-------TAAAATTTTTGATAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTTAAGACGAAGCTAA--TTTGCT-ATAAAT-TTCCATCT----------------TAAAAATAATATTCATCTTACAAACTT---------------------------------------------CAG-AA---A-TAAAT-----AATAC--TTTTTTA--CTTACAGACAAACAAGGTGATGGATAAGCCATTGGCTTCAACCTGCCAATCCATTATSizeHit CountTotal NormTotal
No Reads
droKik1
AAAGGATGTTTAAATTTT---TTACAAT---TTTTGTTTCA--------------------------------------TAAA-----T----TTGGTGATGATTTTTGCTTGTTTTAAATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT-CGAGTAATATTATATATATT------------------------------------------------------------------------------------------A-TAT------------------------G--------T-TTCCATAT---------TTATTATTAAA-TT-----------AAGATTCCAAATATTTTTCTTT--CAATAAACTCACAATAATTATAAT----CCTTGCAA---------------ATTT---TTTACAA--ATTTCAGACCAACAAGCAGGCTGAAATGTCGCTGGTGTCCACTGGCCAGTCCATCATSizeHit CountTotal NormTotal
No Reads
droAna3
AAATGATTT------TTT---AAAT---ATATATATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTAAATATATGATTTTGTTTTAAGGTGTTATTTAAGATTTGATAATCTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAG-AAATTTTTAAAAATAATTTC----TATACTT--ATTGCAGACCAATAAAATGATAGACAATCCTTTGCTCTCCACCGGCCAATCGATAATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCTTTGCTCTCCACCGG............2011.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATAGACAATCCTTTGCTCTC..................2311.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCTCCACCGGCCAATCGA....2111.001100000
droBip1
AAAGGACTT------TTT---TTTT---ATA---------AATAAA---------------------------TTTAATTTTT----------------------------------TAATAA---A-------------AATG------------------------------------------------------------------------------------TATTTTTATTT-------------------------------------------------------------------------------------------CGT-------GCTACACCTTTGCTAATATTGATT-------------------AAA---------------------------------------------------------------------------------------------------------------------------TATT-ACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGTTACGTACCA--CTTTCAGACCAATAAAATTATAGACAATCCTTTGCTGTCCACCGGCCAATCGATAATSizeHit CountTotal NormTotal
No Reads
dp5
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGACCAACAAAATGATAGAATCCCCTTTGCTCTCCACGGGCCAGTCCATTATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTTTGCTCTCCACGGGCCG.........2111.0010100000000
droPer2
AAAATTAAT------GTT---GTACATT-TA--TTTTTTAACAAAA---------------------------TTTCTTTTTTCTATA----------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCTTCATTTTTAATACTATACATAC----------------ATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.AAATTAAT------GTT---GTACATT-TA--T......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.......AT------GTT---GTACATT-TA--TTTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
......AAT------GTT---GTACATT-TA--TTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501010000
droWil2
ACTCGATAG------TGTTTGGAATTGT---GTTTCC----TTTTT-----TTGTTTT-------------------TTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAATTTAATGAAATTAA--------------------------------------AGTATTAG---------------AATCTA-----------------GTCTAGCTTTTTATATTCAATATATTTAATTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTA-TATAAT-TTTTATTT----------------TATAATTAATATTAAGTTTGTGGAATT------------T--AACAGAATCTGCG---------------AC-AA-AAATAATTAAAT-----ATAA---------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..TCGATAG------TGTTTGGAATTGT---GTTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25152.0052011500
..TCGATAG------TGTTTGGAATTGT---GTTTCC----...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26136.0036052290
..TCGATAG------TGTTTGGAATTGT---GTTTCC----T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27130.0030071220
..TCGATAG------TGTTTGGAATTGT---GTTTCC----TT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28115.001508070
....GATAG------TGTTTGGAATTGT---GTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22113.0013012100
................GTTTGGAATTGT---GTTTCC----TTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21113.0013000121
....GATAG------TGTTTGGAATTGT---GTTTCC----TTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27112.001200093
..TCGATAG------TGTTTGGAATTGT---GTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24110.001001270
....GATAG------TGTTTGGAATTGT---GTTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2318.00800080
..TCGATAG------TGTTTGGAATTGT---GTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2317.00702131
...CGATAG------TGTTTGGAATTGT---GTTTCC----T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2616.00604011
....GATAG------TGTTTGGAATTGT---GT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2015.00500140
....GATAG------TGTTTGGAATTGT---GTTTCC----TTTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2814.00400040
...CGATAG------TGTTTGGAATTGT---GTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.00400040
....GATAG------TGTTTGGAATTGT---GTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00300021
.......AG------TGTTTGGAATTGT---GTTTCC----TTTTT-----.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300102
....GATAG------TGTTTGGAATTGT---GTTTCC----TT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300030
...CGATAG------TGTTTGGAATTGT---GTTTCC----TT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00303000
..TCGATAG------TGTTTGGAATTGT---GT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.00300030
.......AG------TGTTTGGAATTGT---GTTTCC----TTTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00300030
......TAG------TGTTTGGAATTGT---GTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00201010
.....ATAG------TGTTTGGAATTGT---GTTTCC----TTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200020
...CGATAG------TGTTTGGAATTGT---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200020
..TCGATAG------TGTTTGGAATTGT---G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00201010
...CGATAG------TGTTTGGAATTGT---GT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200020
..TCGATAG------TGTTTGGAATTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200020
................GTTTGGAATTGT---GTTTCC----TTTTT-----T....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200020
.....ATAG------TGTTTGGAATTGT---GTTTCC----TTTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200020
....GATAG------TGTTTGGAATTGT---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200020
ACTCGATAG------TGTTTGGAATTGT---GTTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00210100
................GTTTGGAATTGT---GTTTCC----...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200020
.......................ATTGT---GTTTCC----TTTTT-----TT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.50300030
...CGATAG------TGTTTGGAATTGT---GTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
........G------TGTTTGGAATTGT---GTTTCC----TTTTT-----T....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
................GTTTGGAATTGT---GTTTCC----TTTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...............TGTTTGGAATTGT---GTTTCC----T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
..TCGATAG------TGTTTGGAATTGT---GTTTAA----...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.......AG------TGTTTGGAATTGT---GTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..TCGATAG------TGTTTGGAATTGT---GTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
......TAG------TGTTTGGAATTGT---GTTTCC----TTTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100001
...CGATAG------TGTTTGGAATTGT---GTTTCC----...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
........................TTGT---GTTTCC----TTTTT-----TTGTTTT-------------------TT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
.......AG------TGTTTGGAATTGT---GTTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...CGATAG------TGTTTGGAATTGT---GTTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
ACTCGATAG------TGTTTGGAATTGT---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..TCGATAG------TGTTTGGAATTGT---T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
.....ATAG------TGTTTGGAATTGT---GTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
......TAG------TGTTTGGAATTGT---GTTTCC----TTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
................GTTTGGAATTGT---GTTTCC----TTTTT-----.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100001
......................AATTGT---GTTTCC----TTTTT-----T....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------T--AACAGAATCTGCG---------------AC-AA-AAAT......................................................................................2311.00100010
..TCGATAG------TGTTTGGAATTGT---GTTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
.....ATAG------TGTTTGGAATTGT---G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
......TAG------TGTTTGGAATTGT---GTTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.....ATAG------TGTTTGGAATTGT---GT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.....ATAG------TGTTTGGAATTGT---GTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...............TGTTTGGAATTGT---GTTTCC----TTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001
........................TTGT---GTTTCC----TTTTT-----TTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50100010
droVir3
A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCAGGCCAACAAAGTGATGGACATGCCTCTGCTGTCCACTGGGCAGTCGATTATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
AGGATATTT------G-----TAAT-------------------------------------TTTTTATATATTATCTTTTTTTTTTA----------------------------------ATTAC-------------T---------------------------------------------------------------------------------------------------AAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTCT-----------------------------------------GAGTGATTTCCCATTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTT----TTTCTCA--ATTGCAGGCTAATAAAGTGATGGATCTGCCGCTGCTAGCAACTGGCCAGTCCGTCATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.GGATATTT------G-----TAAT-------------------------------------TTTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811696.00169613380116440
.GGATATTT------G-----TAAT-------------------------------------TTTTTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19111.0011320060
.GGATATTT------G-----TAAT-------------------------------------TTTTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1957.00351000340
.GGATATTT------G-----TAAT-------------------------------------TTTTTAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000020
.GGATATTT------G-----TAAT-------------------------------------TTTTTATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000020
.GGATATTT------G-----TAAT-------------------------------------TTTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1871.299010080
.GGATATTT------G-----TAAT-------------------------------------TTTTTATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501000010
droGri2
A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCAGGCGAACAAAGTGATGGACATGCCTCTGTTATCCACTGGACAGTCCATCATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 02:03 PM